Pub Date : 2017-12-01DOI: 10.21082/ijas.v18n2.2017.p63-68
H. Safitri, B. S. Purwoko, I. Dewi, S. W. Ardie
Salinity is one of the most serious problems in rice cultivation. Salinity drastically reduced plant growth and yield, especially at seedling stage. Several rice genotypes have been produced, but their tolerance to salinity has not yet been evaluated. The study aimed to evaluate salinity tolerance of rice genotypes at seedling stage. The glasshouse experiment was conducted at Cimanggu Experimental Station, Bogor, from April to May 2013. Thirteen rice genotypes and two check varieties, namely Pokkali (salt tolerant) and IR29 (salt sensitive) were tested at seedling stage. The experiment was arranged in a randomized complete block design with three replications and two factors, namely the levels of NaCl (0 and 120 mM) and 13 genotypes of rice. Rice seedlings were grown in the nutrient culture (hydroponic) supplemented with NaCl at different levels. The growth and salinity injury levels of the genotypes were recorded periodically. The results showed that salinity level of 120 mM NaCl reduced seedling growth of all rice genotypes, but the tolerant ones were survived after 14 days or until the sensitive check variety died. Based on the visual injury symptoms on the leaves, five genotypes, i.e. Dendang, Inpara 5, Inpari 29, IR77674-3B-8-2-2-14-4-AJY2, and IR81493-BBB-6-B- 2-1-2 were tolerant to 120 mM salinity level, while Inpara 4 was comparable to salt sensitive IR29. Hence, Inpara 4 could be used as a salinity sensitive genotype for future research of testing tolerant variety. Further evaluation is needed to confirm their salinity tolerance under field conditions.
{"title":"SALINITY TOLERANCE OF SEVERAL RICE GENOTYPES AT SEEDLING STAGE","authors":"H. Safitri, B. S. Purwoko, I. Dewi, S. W. Ardie","doi":"10.21082/ijas.v18n2.2017.p63-68","DOIUrl":"https://doi.org/10.21082/ijas.v18n2.2017.p63-68","url":null,"abstract":"Salinity is one of the most serious problems in rice cultivation. Salinity drastically reduced plant growth and yield, especially at seedling stage. Several rice genotypes have been produced, but their tolerance to salinity has not yet been evaluated. The study aimed to evaluate salinity tolerance of rice genotypes at seedling stage. The glasshouse experiment was conducted at Cimanggu Experimental Station, Bogor, from April to May 2013. Thirteen rice genotypes and two check varieties, namely Pokkali (salt tolerant) and IR29 (salt sensitive) were tested at seedling stage. The experiment was arranged in a randomized complete block design with three replications and two factors, namely the levels of NaCl (0 and 120 mM) and 13 genotypes of rice. Rice seedlings were grown in the nutrient culture (hydroponic) supplemented with NaCl at different levels. The growth and salinity injury levels of the genotypes were recorded periodically. The results showed that salinity level of 120 mM NaCl reduced seedling growth of all rice genotypes, but the tolerant ones were survived after 14 days or until the sensitive check variety died. Based on the visual injury symptoms on the leaves, five genotypes, i.e. Dendang, Inpara 5, Inpari 29, IR77674-3B-8-2-2-14-4-AJY2, and IR81493-BBB-6-B- 2-1-2 were tolerant to 120 mM salinity level, while Inpara 4 was comparable to salt sensitive IR29. Hence, Inpara 4 could be used as a salinity sensitive genotype for future research of testing tolerant variety. Further evaluation is needed to confirm their salinity tolerance under field conditions.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"63-68"},"PeriodicalIF":0.0,"publicationDate":"2017-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49179967","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-12-01DOI: 10.21082/ijas.v18n2.2017.p69-76
L. Anggria, H. Husnain, Kuniaki Sato, T. Masunaga
Plants absorb silicon (Si) from soil solution in the form of monosilicic acid, also called orthosilicic acid (H 4 SiO 4 ). Application of organic and inorganic materials containing readily soluble Si can increase Si supply in the soil and its uptake by plant. The study aimed to evaluate the release of Si from organic and inorganic material sources and its uptake by rice plant. The released phosphorus (P) from those materials was also evaluated. The inorganic materials evaluated included fly ash, steel slag, silica gel and Japanese silica gel (JSG), while the organic materials consisted of rice husk ash (RHA), rice husk burnt (RHB), media of mushroom (MM), cacao shell biochar (cacao SB) and rice straw compost (RSC). The dynamics of Si and P were observed by periodical samplings at 7, 17, 24 and 34 days after transplanting (DAT). Tiller number and plant height were measured at 16, 21 and 36 DAT. The results showed that Si concentration in solution derived from inorganic material was highest for JSG followed by silica gel (1.107 and 0.806 mmol L -1 , respectively). The release of Si from organic material was higher for RHB and RHA (0.618 and 0.539 mmol L -1 , respectively). Cacao SB, silica gel, JSG and RHB significantly increased plant height at 36 DAT. Meanwhile, Si materials did not significantly affect the tiller number. Of the materials used, steel slag and JSG significantly affected Si uptake by rice plant.
{"title":"RELEASE OF SILICON FROM SILICATE MATERIALS AND ITS UPTAKE BY RICE PLANT","authors":"L. Anggria, H. Husnain, Kuniaki Sato, T. Masunaga","doi":"10.21082/ijas.v18n2.2017.p69-76","DOIUrl":"https://doi.org/10.21082/ijas.v18n2.2017.p69-76","url":null,"abstract":"Plants absorb silicon (Si) from soil solution in the form of monosilicic acid, also called orthosilicic acid (H 4 SiO 4 ). Application of organic and inorganic materials containing readily soluble Si can increase Si supply in the soil and its uptake by plant. The study aimed to evaluate the release of Si from organic and inorganic material sources and its uptake by rice plant. The released phosphorus (P) from those materials was also evaluated. The inorganic materials evaluated included fly ash, steel slag, silica gel and Japanese silica gel (JSG), while the organic materials consisted of rice husk ash (RHA), rice husk burnt (RHB), media of mushroom (MM), cacao shell biochar (cacao SB) and rice straw compost (RSC). The dynamics of Si and P were observed by periodical samplings at 7, 17, 24 and 34 days after transplanting (DAT). Tiller number and plant height were measured at 16, 21 and 36 DAT. The results showed that Si concentration in solution derived from inorganic material was highest for JSG followed by silica gel (1.107 and 0.806 mmol L -1 , respectively). The release of Si from organic material was higher for RHB and RHA (0.618 and 0.539 mmol L -1 , respectively). Cacao SB, silica gel, JSG and RHB significantly increased plant height at 36 DAT. Meanwhile, Si materials did not significantly affect the tiller number. Of the materials used, steel slag and JSG significantly affected Si uptake by rice plant.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"69-76"},"PeriodicalIF":0.0,"publicationDate":"2017-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46714387","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-12-01DOI: 10.21082/ijas.v18n2.2017.p77-86
S. Nuryanti, D. Hakim, H. Siregar, M. Husein Sawit
Rice self-sufficiency is an important programme in Indonesia. The programme has four major targets, i.e. increasing production, stabilizing prices and reserve stocks, and minimizing import. For that purpose, the government gave a mandate to a parastatal, namely National Logistic Agency (Bulog) in implementing the rice policies. Some studies found that involvement of such a parastatal could lead to government failure in budget allocation. The study aimed to estimate social cost of rice self-sufficiency programme based on the implementation of rice instrument policies by Bulog. The study used the national annual data of 2002–2014 period. The method used was the political preference function model to estimate economic rent and dead-weight loss using rice price elasticity of demand and supply. The result showed that in terms of percentage of food security budget, the average of economic rent reached IDR 6.37 trillion per annum (18.54%), while the average of dead-weight loss amounted at IDR 0.90 trillion per annum (2.34%). It proved that rice self-sufficiency programme along with the involvement of Bulog was economically inefficient. The government should provide better agricultural infrastructure, review governmental procurement prices, and stop rice import policy to remedy market failure.
{"title":"POLITICAL ECONOMIC ANALYSIS OF RICE SELF-SUFFICIENCY IN INDONESIA","authors":"S. Nuryanti, D. Hakim, H. Siregar, M. Husein Sawit","doi":"10.21082/ijas.v18n2.2017.p77-86","DOIUrl":"https://doi.org/10.21082/ijas.v18n2.2017.p77-86","url":null,"abstract":"Rice self-sufficiency is an important programme in Indonesia. The programme has four major targets, i.e. increasing production, stabilizing prices and reserve stocks, and minimizing import. For that purpose, the government gave a mandate to a parastatal, namely National Logistic Agency (Bulog) in implementing the rice policies. Some studies found that involvement of such a parastatal could lead to government failure in budget allocation. The study aimed to estimate social cost of rice self-sufficiency programme based on the implementation of rice instrument policies by Bulog. The study used the national annual data of 2002–2014 period. The method used was the political preference function model to estimate economic rent and dead-weight loss using rice price elasticity of demand and supply. The result showed that in terms of percentage of food security budget, the average of economic rent reached IDR 6.37 trillion per annum (18.54%), while the average of dead-weight loss amounted at IDR 0.90 trillion per annum (2.34%). It proved that rice self-sufficiency programme along with the involvement of Bulog was economically inefficient. The government should provide better agricultural infrastructure, review governmental procurement prices, and stop rice import policy to remedy market failure.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"77-86"},"PeriodicalIF":0.0,"publicationDate":"2017-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47766641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-12-01DOI: 10.21082/ijas.v18n2.2017.p51-62
Chaerani Chaerani, M. K. Kardin, S. Suhardi, E. Sofiari, Ria V. Van Ginkel, Remmelt Groenwolt, R. Voorrips
Alternaria solani is a necrotroph fungus that causes three-phased diseases in tomato. Management of the pathogen by using resistant cultivars requires knowledge on the aggressiveness and genetic diversity of the fungus. The aims of this study were to isolate A. solani from major tomato and potato producing areas in Indonesia and to study their aggressiveness and genetic variability. Twenty two A. solani isolates were recovered from early blighted tomato and potato in Central and West Java. A. alternata was also isolated from tomato leaves in West Java and North Sumatra, indicating that early blight in Indonesia may be caused by more than one Alternaria species. Resistance tests of four tomato genotypes to selected A. solani isolates revealed that local isolates were more aggressive in inciting early blight and stem lesion than an imported isolate from USA. This implies that introduced breeding materials must be tested to local isolates to obtain effective resistance genes. Cluster analysis based on amplified fragment length polymorphism (AFLP) obtained from Eco RI+AG and Mse I+C primer amplification separated 28 local and Taiwan isolates from the US isolate, which was coincided with aggressiveness separation between the local isolates and the US isolate. Three clusters of AFLP genotypes which did not associate with geographic origin were observed among tropical isolates. The low genetic diversity among the Indonesian isolates suggests clonal population structure with wide distribution. Successful local tomato breeding requires the availability of local A. solani collection with well-characterized aggressiveness level and molecular diversity to obtain effective resistance genes.
{"title":"VARIATION IN AGGRESSIVENESS AND AFLP AMONG Alternaria solani ISOLATES FROM INDONESIA","authors":"Chaerani Chaerani, M. K. Kardin, S. Suhardi, E. Sofiari, Ria V. Van Ginkel, Remmelt Groenwolt, R. Voorrips","doi":"10.21082/ijas.v18n2.2017.p51-62","DOIUrl":"https://doi.org/10.21082/ijas.v18n2.2017.p51-62","url":null,"abstract":"Alternaria solani is a necrotroph fungus that causes three-phased diseases in tomato. Management of the pathogen by using resistant cultivars requires knowledge on the aggressiveness and genetic diversity of the fungus. The aims of this study were to isolate A. solani from major tomato and potato producing areas in Indonesia and to study their aggressiveness and genetic variability. Twenty two A. solani isolates were recovered from early blighted tomato and potato in Central and West Java. A. alternata was also isolated from tomato leaves in West Java and North Sumatra, indicating that early blight in Indonesia may be caused by more than one Alternaria species. Resistance tests of four tomato genotypes to selected A. solani isolates revealed that local isolates were more aggressive in inciting early blight and stem lesion than an imported isolate from USA. This implies that introduced breeding materials must be tested to local isolates to obtain effective resistance genes. Cluster analysis based on amplified fragment length polymorphism (AFLP) obtained from Eco RI+AG and Mse I+C primer amplification separated 28 local and Taiwan isolates from the US isolate, which was coincided with aggressiveness separation between the local isolates and the US isolate. Three clusters of AFLP genotypes which did not associate with geographic origin were observed among tropical isolates. The low genetic diversity among the Indonesian isolates suggests clonal population structure with wide distribution. Successful local tomato breeding requires the availability of local A. solani collection with well-characterized aggressiveness level and molecular diversity to obtain effective resistance genes.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"51-62"},"PeriodicalIF":0.0,"publicationDate":"2017-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41993588","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-06-01DOI: 10.21082/ijas.v18n1.2017.p7-16
Y. Nugraha, N. Hidayatun, Trisna Trisnaningsih, D. Yuliani
Marker assisted back crossing (MABC) is a molecular tool that can help breeders in reducing backcrossed generation. However, effectiveness of this method still needs further approval using actual phenotypic performances. The International Rice Research Institute had developed Ciherang near isogenic line (NIL) of submergence tolerance, Sub1. The study aimed to evaluate phenotypic performances of Ciherang Sub1 NIL in the greenhouse and field conditions. The study was conducted in ten locations using five submergence-tolerant varieties and a control treatment under normal conditions. The results showed that the average grain yields and some agronomic traits of Ciherang Sub1 were not significantly different compared with those of Ciherang (recurrent parent). However, under 10- and 15-days of submergence. Ciherang Sub1 was significantly different to Ciherang. The survival rate of Ciherang Sub1 was higher than Ciherang after 14-days submerged in the greenhouse tank experiment. Response of Ciherang Sub1 to brown planthopper biotype 1, 2 and 3, Xanthomonas oryzae pathotype III, IV and VIII, and rice tungro virus inocula from Subang, Magelang and Lanrang were also comparable with its recurrent parent. Quality and physico-chemical properties of rice (milled rice) of Ciherang Sub1 were not different with those of Ciherang. Similarity level of phenotypic traits of Ciherang Sub1 compared to Ciherang was more than 87.5%. This finding proved that a single backcross method can produce progeny identic with its parent. This MABC line can be recommended to farmers in flood-prone area where the Ciherang is preferred.
{"title":"Phenotypic Performance of Ciherang Sub1 Near Isogenic Line as an Adaptive Variety for Flooding Conditions","authors":"Y. Nugraha, N. Hidayatun, Trisna Trisnaningsih, D. Yuliani","doi":"10.21082/ijas.v18n1.2017.p7-16","DOIUrl":"https://doi.org/10.21082/ijas.v18n1.2017.p7-16","url":null,"abstract":"Marker assisted back crossing (MABC) is a molecular tool that can help breeders in reducing backcrossed generation. However, effectiveness of this method still needs further approval using actual phenotypic performances. The International Rice Research Institute had developed Ciherang near isogenic line (NIL) of submergence tolerance, Sub1. The study aimed to evaluate phenotypic performances of Ciherang Sub1 NIL in the greenhouse and field conditions. The study was conducted in ten locations using five submergence-tolerant varieties and a control treatment under normal conditions. The results showed that the average grain yields and some agronomic traits of Ciherang Sub1 were not significantly different compared with those of Ciherang (recurrent parent). However, under 10- and 15-days of submergence. Ciherang Sub1 was significantly different to Ciherang. The survival rate of Ciherang Sub1 was higher than Ciherang after 14-days submerged in the greenhouse tank experiment. Response of Ciherang Sub1 to brown planthopper biotype 1, 2 and 3, Xanthomonas oryzae pathotype III, IV and VIII, and rice tungro virus inocula from Subang, Magelang and Lanrang were also comparable with its recurrent parent. Quality and physico-chemical properties of rice (milled rice) of Ciherang Sub1 were not different with those of Ciherang. Similarity level of phenotypic traits of Ciherang Sub1 compared to Ciherang was more than 87.5%. This finding proved that a single backcross method can produce progeny identic with its parent. This MABC line can be recommended to farmers in flood-prone area where the Ciherang is preferred.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"7-16"},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45678872","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-06-01DOI: 10.21082/ijas.v18n1.2017.p25-32
L. Hakim, Suyamto Suyamto
The knowledge of genetic action, heritability and genetic variability is useful and permits plant breeder to design efficient breeding strategies in soybean. The objectives of this study were to determine gene action, genetic variability, heritability and genetic advance of quantitative characters that could be realized through selection of segregation progenies. The F1 population and F2 progenies of six crosses among five soybean varieties were evaluated at Muneng Experimental Station, East Java during the dry season of 2014. The lines were planted in a randomized block design with four replications. The seeds of each F1 and F2 progenies and parents were planted in four rows of 3 m long, 40 cm x 20 cm plant spacing, one plant per hill. The result showed that pod number per plant, seed yield, plant yield and harvest index were found to be predominantly controlled by additive gene effects. Seed size was also controlled by additive gene effects, with small seed dominant to large seed size. Plant height was found to be controlled by both additive and nonadditive gene effects. Similarly, days to maturity was due mainly to additive and nonadditive gene effects, with earliness dominant to lateness. Days to maturity had the highest heritability estimates of 49.3%, followed by seed size (47.0%), harvest index (45.8%), and pod number per plant (45.5%). Therefore, they could be used in the selection of a high yielding soybean genotype in the F3 generation.
对遗传作用、遗传力和遗传变异的认识有助于植物育种家设计有效的大豆育种策略。本研究的目的是确定通过分离后代的选择可以实现的数量性状的基因作用、遗传变异性、遗传力和遗传先进性。2014年旱季，在东爪哇木能试验站对5个大豆品种6个杂交组合的F1群体和F2后代进行了评价。采用随机区组设计，共4个重复。每个F1和F2后代和亲本的种子以3 m长、40 cm × 20 cm的株距种植4行，每山1株。结果表明，单株荚果数、籽粒产量、单株产量和收获指数主要受加性基因效应控制。籽粒大小也受加性基因效应控制，籽粒小对籽粒大占优势。株高受加性和非加性基因效应的共同控制。同样，成熟期主要受加性和非加性基因的影响，早熟比晚熟占优势。成熟期遗传力最高，为49.3%，其次是种子大小(47.0%)、收获指数(45.8%)和单株荚果数(45.5%)。因此，它们可用于F3代高产大豆基因型的选择。
{"title":"GENE ACTION AND HERITABILITY ESTIMATES OF QUANTITATIVE CHARACTERS AMONG LINES DERIVED FROM VARIETAL CROSSES OF SOYBEAN","authors":"L. Hakim, Suyamto Suyamto","doi":"10.21082/ijas.v18n1.2017.p25-32","DOIUrl":"https://doi.org/10.21082/ijas.v18n1.2017.p25-32","url":null,"abstract":"The knowledge of genetic action, heritability and genetic variability is useful and permits plant breeder to design efficient breeding strategies in soybean. The objectives of this study were to determine gene action, genetic variability, heritability and genetic advance of quantitative characters that could be realized through selection of segregation progenies. The F1 population and F2 progenies of six crosses among five soybean varieties were evaluated at Muneng Experimental Station, East Java during the dry season of 2014. The lines were planted in a randomized block design with four replications. The seeds of each F1 and F2 progenies and parents were planted in four rows of 3 m long, 40 cm x 20 cm plant spacing, one plant per hill. The result showed that pod number per plant, seed yield, plant yield and harvest index were found to be predominantly controlled by additive gene effects. Seed size was also controlled by additive gene effects, with small seed dominant to large seed size. Plant height was found to be controlled by both additive and nonadditive gene effects. Similarly, days to maturity was due mainly to additive and nonadditive gene effects, with earliness dominant to lateness. Days to maturity had the highest heritability estimates of 49.3%, followed by seed size (47.0%), harvest index (45.8%), and pod number per plant (45.5%). Therefore, they could be used in the selection of a high yielding soybean genotype in the F3 generation.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"25-32"},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44274115","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-06-01DOI: 10.21082/ijas.v18n1.2017.p17-24
E. I. Riyanti, E. Listanto
Biomass from lignocellulosic wastes is a potential source for biobased products. However, one of the constraints in utilization of biomass hydrolysate is the presence of inhibitors. Therefore, the use of inhibitor-tolerant microorganisms in the fermentation is required. The study aimed to investigate the effect of a mixture of inhibitors on the growth of Saccharomyces cerevisiae strain I136 grown in medium containing synthetic inhibitors (acetic acid, formic acid, furfural, 5-hydroxymethyl furfural/5-HMF, and levulinic acid) in four different concentrations with a mixture of carbon sources, glucose (50 g.l-1) and xylose (50 g.l-1) at 30oC. The parameters related to growth and fermentation products were observed. Results showed that the strain was able to grow in media containing natural inhibitors (BSL medium) with µmax of 0.020/h. Higher level of synthetic inhibitors prolonged the lag phase, decreased the cell biomass and ethanol production, and specific growth rate. The strain could detoxify furfural and 5-HMF and produced the highest ethanol (Y(p/s) of 0.32 g.g-1) when grown in BSL. Glucose was utilized as its level decreased in a result of increase in cell biomass, in contrast to xylose which was not consumed. The highest cell biomass was produced in YNB with Y (x/s) value of 0.25 g.g-1. The strain produced acetic acid as a dominant side product and could convert furfural into a less toxic compound, hydroxyl furfural. This robust tolerant strain provides basic information on resistance mechanism and would be useful for bio-based cell factory using lignocellulosic materials.
{"title":"INHIBITION OF THE GROWTH OF TOLERANT YEAST Saccharomyces cerevisiae STRAIN I136 BY A MIXTURE OF SYNTHETIC INHIBITORS","authors":"E. I. Riyanti, E. Listanto","doi":"10.21082/ijas.v18n1.2017.p17-24","DOIUrl":"https://doi.org/10.21082/ijas.v18n1.2017.p17-24","url":null,"abstract":"Biomass from lignocellulosic wastes is a potential source for biobased products. However, one of the constraints in utilization of biomass hydrolysate is the presence of inhibitors. Therefore, the use of inhibitor-tolerant microorganisms in the fermentation is required. The study aimed to investigate the effect of a mixture of inhibitors on the growth of Saccharomyces cerevisiae strain I136 grown in medium containing synthetic inhibitors (acetic acid, formic acid, furfural, 5-hydroxymethyl furfural/5-HMF, and levulinic acid) in four different concentrations with a mixture of carbon sources, glucose (50 g.l-1) and xylose (50 g.l-1) at 30oC. The parameters related to growth and fermentation products were observed. Results showed that the strain was able to grow in media containing natural inhibitors (BSL medium) with µmax of 0.020/h. Higher level of synthetic inhibitors prolonged the lag phase, decreased the cell biomass and ethanol production, and specific growth rate. The strain could detoxify furfural and 5-HMF and produced the highest ethanol (Y(p/s) of 0.32 g.g-1) when grown in BSL. Glucose was utilized as its level decreased in a result of increase in cell biomass, in contrast to xylose which was not consumed. The highest cell biomass was produced in YNB with Y (x/s) value of 0.25 g.g-1. The strain produced acetic acid as a dominant side product and could convert furfural into a less toxic compound, hydroxyl furfural. This robust tolerant strain provides basic information on resistance mechanism and would be useful for bio-based cell factory using lignocellulosic materials.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"17-24"},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41991258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-06-01DOI: 10.21082/ijas.v18n1.2017.p33-42
D. Yulistiani, W. Puastuti, B. Haryanto, A. Purnomoadi, M. Kurihara, A. Thalib
Feeding animal with fibrous materials such as corn cob will emit methane. Complete rumen modifier (CRM) is an improved feed additive comprised a mixture of Sapindus rarak, sesbania, albizia leaves and minerals that functions as a methane inhibitor. The study aimed to determine the effect of CRM supplementation on the feed intake, nutrient digestibility, rumen fermentation, methane emission and growth of lambs. The experiment was designed in a complete randomized block, four levels of CRM (0%, 1%, 2%, and 3%), six group of 24 male lambs per treatment based on the body weight. Basal diet used was corn cob silage ad libitum and concentrate (500 g/day) as a supplement. The results showed that CRM supplementation did not affect feed consumption and average daily gain, but significantly decreased the dry matter, as well as organic matter and protein digestibility. The neutral detergent fiber (NDF) and acid detergent fiber (ADF) digestibility linearly decreased with increasing level of CRM. Ruminal pH, ammonia concentration and volatile fatty acid (VFA) concentration were not affected by the CRM supplementation. Methane production expressed in kJ/MJ gross energy (GE) or digestible energy (DE) intake significantly decreased by 32% at the 2–3% CRM supplementation and reduced by 39% when methane production was expressed in g/kg digested NDF. It can be concluded that 2% CRM supplementation in the corn cob basal diet did not affect nutrient intake and growth rate of the lamb, as well as rumen fermentation. The study suggests that CRM is an environmentally friendly feed additive for lamb
{"title":"Complete Rumen Modifier Supplementation in Corn Cob Silage Basal Diet of Lamb Reduces Methane Emission","authors":"D. Yulistiani, W. Puastuti, B. Haryanto, A. Purnomoadi, M. Kurihara, A. Thalib","doi":"10.21082/ijas.v18n1.2017.p33-42","DOIUrl":"https://doi.org/10.21082/ijas.v18n1.2017.p33-42","url":null,"abstract":"Feeding animal with fibrous materials such as corn cob will emit methane. Complete rumen modifier (CRM) is an improved feed additive comprised a mixture of Sapindus rarak, sesbania, albizia leaves and minerals that functions as a methane inhibitor. The study aimed to determine the effect of CRM supplementation on the feed intake, nutrient digestibility, rumen fermentation, methane emission and growth of lambs. The experiment was designed in a complete randomized block, four levels of CRM (0%, 1%, 2%, and 3%), six group of 24 male lambs per treatment based on the body weight. Basal diet used was corn cob silage ad libitum and concentrate (500 g/day) as a supplement. The results showed that CRM supplementation did not affect feed consumption and average daily gain, but significantly decreased the dry matter, as well as organic matter and protein digestibility. The neutral detergent fiber (NDF) and acid detergent fiber (ADF) digestibility linearly decreased with increasing level of CRM. Ruminal pH, ammonia concentration and volatile fatty acid (VFA) concentration were not affected by the CRM supplementation. Methane production expressed in kJ/MJ gross energy (GE) or digestible energy (DE) intake significantly decreased by 32% at the 2–3% CRM supplementation and reduced by 39% when methane production was expressed in g/kg digested NDF. It can be concluded that 2% CRM supplementation in the corn cob basal diet did not affect nutrient intake and growth rate of the lamb, as well as rumen fermentation. The study suggests that CRM is an environmentally friendly feed additive for lamb","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"33-42"},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48577691","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2017-06-01DOI: 10.21082/IJAS.V18N1.2017.P1-6
W. R. Rohaeni, U. Susanto, A. Yuningsih
Resistance traits to brown planthopper on rice varieties are controlled by dominant and recessive genes called Bph/bph. Bph17 is one of dominant genes that control rice resistance to brown planthopper. Marker of Bph17 allele can be used as a tool of marker assisted selection (MAS) in breeding activity. Association of Bph17 allele and resistance to brown planthopper in Indonesian landraces and new-improved varieties of rice is not clearly known. The study aimed to determine the association of Bph17 allele in landraces and new-improved varieties of rice resistant to brown planthopper. Twenty-one rice genotypes were used in the study, consisting of 13 landraces, 5 improved varieties, 3 popular varieties and a check variety Rathu Heenati. Two simple sequence repeat markers linked to Bph17 allele were used, i.e. RM8213 and RM5953. The results showed that association of Bph17 allele in landraces and new-improved varieties of rice resistant to brown planthopper resistance was very low (r = -0.019 and -0.023, respectively). The presence of Bph17 allele did not constantly express resistance to brown planthopper. The study suggests that Bph17 allele cannot be used as a tool of MAS for evaluating resistance of landraces and new-improved varieties of rice to brown planthopper. Further research is needed to obtain a specific gene marker that can be used as a tool of MAS and applicable for Indonesian differential rice varieties.
{"title":"LOW ASSOCIATION OF Bph17 ALLELE IN LANDRACES AND IMPROVED VARIETIES OF RICE RESISTANT TO BROWN PLANTHOPPER","authors":"W. R. Rohaeni, U. Susanto, A. Yuningsih","doi":"10.21082/IJAS.V18N1.2017.P1-6","DOIUrl":"https://doi.org/10.21082/IJAS.V18N1.2017.P1-6","url":null,"abstract":"Resistance traits to brown planthopper on rice varieties are controlled by dominant and recessive genes called Bph/bph. Bph17 is one of dominant genes that control rice resistance to brown planthopper. Marker of Bph17 allele can be used as a tool of marker assisted selection (MAS) in breeding activity. Association of Bph17 allele and resistance to brown planthopper in Indonesian landraces and new-improved varieties of rice is not clearly known. The study aimed to determine the association of Bph17 allele in landraces and new-improved varieties of rice resistant to brown planthopper. Twenty-one rice genotypes were used in the study, consisting of 13 landraces, 5 improved varieties, 3 popular varieties and a check variety Rathu Heenati. Two simple sequence repeat markers linked to Bph17 allele were used, i.e. RM8213 and RM5953. The results showed that association of Bph17 allele in landraces and new-improved varieties of rice resistant to brown planthopper resistance was very low (r = -0.019 and -0.023, respectively). The presence of Bph17 allele did not constantly express resistance to brown planthopper. The study suggests that Bph17 allele cannot be used as a tool of MAS for evaluating resistance of landraces and new-improved varieties of rice to brown planthopper. Further research is needed to obtain a specific gene marker that can be used as a tool of MAS and applicable for Indonesian differential rice varieties.","PeriodicalId":13456,"journal":{"name":"Indonesian Journal of Agricultural Science","volume":"18 1","pages":"1-6"},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46208162","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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