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Identification and function of the Pax gene Bmgsb in the silk gland of Bombyx mori 森蚕丝腺中 Pax 基因 Bmgsb 的鉴定和功能。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-18 DOI: 10.1111/imb.12886
Hongguo Yang, Yongping Xu, Yutong Yuan, Xuebing Liu, Jikailang Zhang, Jiaojiao Li, Ran Zhang, Jun Cao, Tingcai Cheng, Chun Liu

Paired box (Pax) genes are highly conserved throughout evolution, and the Pax protein is an important transcription factor of embryonic development. The Pax gene Bmgsb is expressed in the silk glands of silkworm, but its biological functions remain unclear. This study aimed to investigate the expression pattern of Bmgsb in the silk gland and explore its functions using RNA interference (RNAi). Here, we identified eight Pax genes in Bombyx mori. Phylogenetic analysis showed that the B. mori Pax genes were highly homologous to the Pax genes in other insects and highly evolutionarily conserved. The tissue expression profile showed that Bmgsb was expressed in the anterior silk gland and anterior part of the middle silk gland (AMSG). RNAi of Bmgsb resulted in defective development of the AMSG, and the larvae were mostly unable to cocoon in the wandering stage. RNA-seq analysis showed that the fibroin genes fib-l, fib-h and p25, cellular heat shock response-related genes and phenol oxidase genes were considerably upregulated upon Bmgsb knockdown. Furthermore, quantitative reverse transcription-PCR results showed that the fibroin genes and ubiquitin proteolytic enzyme-related genes were significantly upregulated in the AMSG after Bmgsb knockdown. This study provides a foundation for future research on the biological functions of B. mori Pax genes. In addition, it demonstrates the important roles of Bmgsb in the transcriptional regulation of fibroin genes and silk gland development.

配对盒(Pax)基因在整个进化过程中高度保守,Pax 蛋白是胚胎发育的重要转录因子。Pax基因Bmgsb在家蚕丝腺中表达,但其生物学功能尚不清楚。本研究旨在利用 RNA 干扰(RNAi)技术研究 Bmgsb 在蚕丝腺中的表达模式并探索其功能。在此,我们在桑蚕中发现了 8 个 Pax 基因。系统进化分析表明,桑蚕的Pax基因与其他昆虫的Pax基因高度同源,在进化上高度保守。组织表达谱显示,Bmgsb在前丝腺和中丝腺(AMSG)前部表达。对Bmgsb的RNAi导致AMSG发育缺陷,幼虫在游走期大多不能结茧。RNA-seq分析表明,Bmgsb基因敲除后,纤维蛋白基因fib-l、fib-h和p25、细胞热休克反应相关基因和苯酚氧化酶基因均显著上调。此外,反转录-PCR定量分析结果表明,Bmgsb基因敲除后,AMSG中的纤维蛋白基因和泛素蛋白水解酶相关基因明显上调。这项研究为今后研究 B. mori Pax 基因的生物学功能奠定了基础。此外,它还证明了 Bmgsb 在纤维蛋白基因转录调控和丝腺发育中的重要作用。
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引用次数: 0
Reminiscences on the honeybee genome project and the rise of epigenetic concepts in insect science 回忆蜜蜂基因组计划和昆虫科学中表观遗传概念的兴起。
IF 2.3 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-09 DOI: 10.1111/imb.12888
Ryszard Maleszka

The sequencing of the honeybee genome in 2006 was an important technological and logistic achievement experience. But what benefits have flown from the honeybee genome project? What does the annotated genomic assembly mean for the study of behavioural complexity and organismal function in honeybees? Here, I discuss several lines of research that have arisen from this project and highlight the rapidly expanding studies on insect epigenomics, emergent properties of royal jelly, the mechanism of nutritional control of development and the contribution of epigenomic regulation to the evolution of sociality. I also argue that the term ‘insect epigenetics’ needs to be carefully redefined to reflect the diversity of epigenomic toolkits in insects and the impact of lineage-specific innovations on organismal outcomes. The honeybee genome project helped pioneer advances in social insect molecular biology, and fuelled breakthrough research into the role of flexible epigenomic control systems in linking genotype to phenotype.

2006 年蜜蜂基因组测序是一项重要的技术和后勤成就。但是,蜜蜂基因组计划带来了哪些益处?附有注释的基因组汇编对蜜蜂行为复杂性和机体功能的研究意味着什么?在此,我将讨论由该项目产生的几条研究路线,并重点介绍迅速扩展的昆虫表观基因组学、蜂王浆的新特性、发育的营养控制机制以及表观基因组调控对社会性进化的贡献。我还认为,"昆虫表观遗传学 "一词需要仔细重新定义,以反映昆虫表观基因组工具包的多样性以及特定品系创新对生物体结果的影响。蜜蜂基因组计划推动了社会性昆虫分子生物学的进步,并促进了对灵活的表观基因组控制系统在连接基因型与表型方面的作用的突破性研究。
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引用次数: 0
Constitutively expressed small heat shock protein LsHsp21.5 not only enhances heat tolerance but also helps to maintain reproduction in female Laodelphax striatellus 连续表达的小型热休克蛋白LsHsp21.5不仅能增强雌性Laodelphax striatellus的耐热性,还有助于维持其繁殖。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-06 DOI: 10.1111/imb.12889
Xue Xia, Feng Zhu, Hongtao Niu, Lei Pan, Zhouting Zheng, Lingyun Pan, Ary A. Hoffmann, Jichao Fang, Lihua Wang

Coping with stressful conditions and maintaining reproduction are two key biological processes that affect insect population dynamics. Small heat shock proteins (sHSPs) are involved in the stress response and the development of insects. The sHsp gene Laodelphax striatellus (Hemiptera: Delphacidae) sHsp 21.5 (LsHsp21.5) showed constitutive, stage- and organ-specific expression in L. striatellus, a pest that damages cultivated rice in east Asia. The expression of LsHsp21.5 was highest in the ovary, with 43.60, 12.99 and 1.45 time higher expression here than in the head, gut and female fat bodies, respectively. The expression of this gene was weakly affected by heat or cold shock. The gene provided in vitro protection against heat damage to malate dehydrogenase and in vivo protection against heat stress in Escherichia coli (Enterobacteriales: Enterobacteriaceae) BL21(DE3) and L. striatellus. Moreover, L. striatellus reproduction decreased by 1.85 times when the expression of LsHsp21.5 was inhibited by RNA interference. The expression of some genes related to reproduction, such as the homologous gene of chorion protein, also declined. These results suggest that LsHsp21.5 expression not only protects other proteins against stress but also helps maintain the stable expression of some reproduction-related genes under non-stressful conditions, with impacts on L. striatellus fecundity.

应对应激条件和维持繁殖是影响昆虫种群动态的两个关键生物过程。小热休克蛋白(sHSPs)参与了昆虫的应激反应和发育过程。sHsp 基因 Laodelphax striatellus (Hemiptera: Delphacidae) sHsp 21.5 (LsHsp21.5) 在 L. striatellus(一种危害东亚栽培稻的害虫)中表现出组成型、阶段性和器官特异性表达。LsHsp21.5 在卵巢中的表达量最高,分别比在头部、肠道和雌性脂肪体中的表达量高 43.60 倍、12.99 倍和 1.45 倍。该基因的表达受热休克或冷休克的影响较弱。该基因在体外保护苹果酸脱氢酶免受热损伤,在体内保护大肠杆菌(肠杆菌科:Enterobacteriaceae)BL21(DE3)和条纹叶蝉免受热胁迫。此外,当通过 RNA 干扰抑制 LsHsp21.5 的表达时,横纹肌藻的繁殖率降低了 1.85 倍。一些与繁殖有关的基因,如绒毛膜蛋白的同源基因的表达也下降了。这些结果表明,LsHsp21.5的表达不仅能保护其他蛋白免受胁迫,还有助于在非胁迫条件下维持一些与繁殖相关的基因的稳定表达,从而影响条纹叶蝉的繁殖力。
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引用次数: 0
A parasitoid regulates 20E synthesis and antibacterial activity of the host for development by inducing host nitric oxide production 一种寄生虫通过诱导宿主产生一氧化氮来调节宿主的 20E 合成和抗菌活性,从而促进发育。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-05 DOI: 10.1111/imb.12890
Minli Dai, Zhe Jiang, Fanchi Li, Jing Wei, Bing Li

Parasitoids are important components of the natural enemy guild in the biological control of insect pests. They depend on host resources to complete the development of a specific stage or whole life cycle and thus have evolved towards optimal host exploitation strategies. In the present study, we report a specific survival strategy of a fly parasitoid Exorista sorbillans (Diptera: Tachinidae), which is a potential biological control agent for agricultural pests and a pest in sericulture. We found that the expression levels of nitric oxide synthase (NOS) and nitric oxide (NO) production in host Bombyx mori (Lepidoptera: Bombycidae) were increased after E. sorbillans infection. Reducing NOS expression and NO production with an NOS inhibitor (NG-nitro-L-arginine methyl ester hydrochloride) in infected B. mori significantly impeded the growth of E. sorbillans larvae. Moreover, the biosynthesis of 20-hydroxyecdysone (20E) in infected hosts was elevated with increasing NO production, and inhibiting NOS expression lowered 20E biosynthesis. More importantly, induced NO synthesis was required to eliminate intracellular bacterial pathogens that presumably competed for shared host resources. Inhibiting NOS expression down-regulated the transcription of antimicrobial peptide genes and increased the number of bacteria in parasitized hosts. Collectively, this study revealed a new perspective on the role of NO in host–parasitoid interactions and a novel mechanism for parasitoid regulation of host physiology to support its development.

在害虫的生物防治中,寄生虫是天敌行列的重要组成部分。它们依赖寄主资源来完成特定阶段或整个生命周期的发育,因此进化出了最佳的寄主利用策略。在本研究中,我们报告了一种蝇类寄生虫 Exorista sorbillans(双翅目:恙螨科)的特殊生存策略,它是一种潜在的农业害虫生物控制剂,也是养蚕业中的一种害虫。我们发现,在寄主蛾类(鳞翅目:蛾科)中,一氧化氮合酶(NOS)的表达水平和一氧化氮(NO)的产生水平在感染山毛虫后都有所提高。用 NOS 抑制剂(NG-硝基-L-精氨酸甲酯盐酸盐)降低受感染的森雌蛾体内 NOS 的表达和一氧化氮的产生,可显著阻碍山毛虫幼虫的生长。此外,受感染宿主体内 20-羟基蜕皮激素(20E)的生物合成会随着 NO 产量的增加而提高,而抑制 NOS 的表达则会降低 20E 的生物合成。更重要的是,诱导的 NO 合成是消灭细胞内细菌病原体所必需的,这些病原体可能会竞争共享宿主资源。抑制 NOS 的表达会降低抗菌肽基因的转录,增加寄生宿主体内的细菌数量。总之,这项研究从一个新的角度揭示了氮氧化物在宿主与寄生虫相互作用中的作用,以及寄生虫调节宿主生理以支持其发展的新机制。
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引用次数: 0
Function analysis and characterisation of a novel chitinase, MdCht9, in Musca domestica 家蝇中一种新型几丁质酶 MdCht9 的功能分析和特征描述
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-31 DOI: 10.1111/imb.12887
Wen-Jing Zhao, Yan Li, Zhen-Long Jiao, Pei-Pei Su, Long-Bing Yang, Chao-Qin Sun, Jiang-Fan Xiu, Xiao-Li Shang, Guo Guo

Insect chitinases have been proposed as potential targets for pest control. In this work, a novel group IV chitinase gene, MdCht9, from Musca domestica was found to have multiple functions in the physiological activity, including chitin regulation, development and antifungal immunity. The MdCht9 gene was cloned and sequenced, its phylogeny was analysed and its expression was determined in normal and 20E treated larvae. Subsequently, RNA interference (RNAi)-mediated MdCht9 knockdown was performed, followed by biochemical assays, morphological observations and transcriptome analysis. Finally, the recombinant protein MdCht9 (rMdCht9) was purified and tested for anti-microbial activity and enzyme characteristics. The results showed that MdCht9 consists of three domains, highly expressed in a larval salivary gland. RNAi silencing of MdCht9 resulted in significant down-regulation of chitin content and expression of 15 chitin-binding protein (CBP) genes, implying a new insight that MdCht9 might regulate chitin content by influencing the expression of CBPs. In addition, more than half of the lethality and partial wing deformity appeared due to the dsMdCht9 treatment. In addition, the rMdCht9 exhibited anti-microbial activity towards Candida albicans (fungus) but not towards Escherichia coli (G−) or Staphylococcus aureus (G+). Our work expands on previous studies of chitinase while providing a potential target for pest management.

昆虫几丁质酶被认为是害虫控制的潜在目标。在这项工作中,研究人员发现来自家蝇的一种新型第 IV 组几丁质酶基因 MdCht9 在生理活动中具有多种功能,包括几丁质调节、发育和抗真菌免疫。对 MdCht9 基因进行了克隆和测序,分析了其系统发育,并测定了其在正常幼虫和 20E 处理幼虫中的表达。随后,进行了 RNA 干扰(RNAi)介导的 MdCht9 基因敲除,并进行了生化检测、形态观察和转录组分析。最后,纯化重组蛋白 MdCht9(rMdCht9),并检测其抗微生物活性和酶特性。结果表明,MdCht9由三个结构域组成,在幼虫唾液腺中高度表达。RNAi沉默MdCht9可显著下调几丁质含量和15个几丁质结合蛋白(CBP)基因的表达,这意味着MdCht9可能通过影响CBP的表达来调控几丁质含量。此外,一半以上的致死和翅膀部分畸形是由于dsMdCht9处理造成的。此外,rMdCht9 对白色念珠菌(真菌)具有抗微生物活性,但对大肠杆菌(G-)或金黄色葡萄球菌(G+)没有抗微生物活性。我们的工作拓展了以往对几丁质酶的研究,同时为害虫管理提供了一个潜在的目标。
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引用次数: 0
Characterisation of lepidopteran geranylgeranyl diphosphate synthase as a putative pesticide target 鳞翅目香叶基二磷酸合成酶作为农药靶点的特性研究。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-14 DOI: 10.1111/imb.12885
Evangelia Katsavou, Chara Sarafoglou, Vasileia Balabanidou, Evangelia Skoufa, Ralf Nauen, Marc Linka, Sven Geibel, Shane Denecke, John Vontas

Geranylgeranyl pyrophosphate (diphosphate) synthase (GGPPS) plays an important role in various physiological processes in insects, such as isoprenoid biosynthesis and protein prenylation. Here, we functionally characterised the GGPPS from the major agricultural lepidopteran pests Spodoptera frugiperda and Helicoverpa armigera. Partial disruption of GGPPS by CRISPR in S. frugiperda decreased embryo hatching rate and larval survival, suggesting that this gene is essential. Functional expression in vitro of Helicoverpa armigera GGPPS in Escherichia coli revealed a catalytically active enzyme. Next, we developed and optimised an enzyme assay to screen for potential inhibitors, such as the zoledronate and the minodronate, which showed a dose-dependent inhibition. Phylogenetic analysis of GGPPS across insects showed that GGPPS is highly conserved but also revealed several residues likely to be involved in substrate binding, which were substantially different in bee pollinator and human GGPPS. Considering the essentiality of GGPPS and its putative binding residue variability qualifies a GGPPS as a novel pesticide target. The developed assay may contribute to the identification of novel insecticide leads.

Geranylgeranyl焦磷酸(二磷酸)合成酶(GGPPS)在昆虫类异戊二烯生物合成和蛋白质烯酰化等多种生理过程中起重要作用。在此,我们对主要农业鳞翅目害虫狐尾蛾和棉铃虫的GGPPS进行了功能表征。CRISPR部分破坏GGPPS会降低S. frugiperda的胚胎孵化率和幼虫存活率,表明该基因是必不可少的。棉铃虫GGPPS在大肠杆菌中的体外功能表达显示出一种催化活性酶。接下来,我们开发并优化了一种酶分析来筛选潜在的抑制剂,如唑来膦酸盐和米诺膦酸盐,它们显示出剂量依赖性的抑制作用。昆虫GGPPS的系统发育分析表明,GGPPS具有高度保守性,但也发现了一些可能参与底物结合的残基,这些残基在蜜蜂传粉媒介和人类GGPPS中存在很大差异。考虑到GGPPS的重要性及其假定的结合残基可变性,GGPPS有资格成为一种新的农药靶标。该方法可用于新型杀虫剂铅的鉴定。
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引用次数: 0
Juvenile hormone inhibits adult cuticle formation in Drosophila melanogaster through Kr-h1/Dnmt2-mediated DNA methylation of Acp65A promoter 幼激素通过Kr-h1/Dnmt2介导的Acp65A启动子的DNA甲基化抑制黑腹果蝇成虫角质层的形成。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-02 DOI: 10.1111/imb.12884
Qianyu He, Xiaochun Fan, Shunxin Wang, Shanshan Chen, Jinxia Chen

Differentiation of imaginal epidermal cells of Drosophila melanogaster to form adult cuticles occurs at approximately 40–93 h after puparium formation. Juvenile hormone (JH) given at pupariation results in formation of a second pupal cuticle in the abdomen instead of the adult cuticle. Although the adult cuticle gene Acp65A has been reported to be down-regulated following JH treatment, the regulatory mechanism remains unclear. Here, we found that the JH primary response gene Krüppel homologue 1 (Kr-h1) plays a vital role in the repression of adult cuticle formation through the mediation of JH action. Overexpression of Kr-h1 mimicked—while knocking down of Kr-h1 attenuated—the inhibitory action of JH on the formation of the adult abdominal cuticle. Further, we found that Kr-h1 inhibited the transcription of Acp65A by directly binding to the consensus Kr-h1 binding site (KBS) within the Acp65A promoter region. Moreover, the DNA methyltransferase Dnmt2 was shown to interact with Kr-h1, combined with the KBS to promote the DNA methylation of sequences around the KBS, in turn inhibiting the transcription of Acp65A. This study advances our understanding of the molecular basis of the “status quo” action of JH on the Drosophila adult metamorphosis.

黑腹果蝇的想象表皮细胞分化形成成年角质层发生在大约40-93 h。蛹蜕皮时给予的幼激素(JH)会在腹部形成第二个蛹角质层,而不是成虫角质层。尽管成人角质层基因Acp65A已被报道在JH治疗后下调,但其调节机制尚不清楚。在这里,我们发现JH初级反应基因Krüppel同源物1(Kr-h1)通过JH作用在抑制成人角质层形成中发挥着至关重要的作用。Kr-h1的过表达模拟了敲低Kr-h1,减弱了JH对成人腹部角质层形成的抑制作用。此外,我们发现Kr-h1通过直接结合Acp65A启动子区内的共有Kr-h1结合位点(KBS)来抑制Acp65A的转录。此外,DNA甲基转移酶Dnmt2显示与Kr-h1相互作用,与KBS结合以促进KBS周围序列的DNA甲基化,进而抑制Acp65A的转录。本研究加深了我们对JH对果蝇成虫变态“现状”作用的分子基础的理解。
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引用次数: 0
A classic screening marker does not affect antennal electrophysiology but strongly regulates reproductive behaviours in Bactrocera dorsalis 一个经典的筛选标记不影响触角电生理,但强烈调节背小实蝇的生殖行为。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-10-25 DOI: 10.1111/imb.12883
QiQige Wuyun, Yan Zhang, Jinxi Yuan, Jie Zhang, Cong Ren, Qi Wang, Shanchun Yan, Wei Liu, Guirong Wang

The key phenotype white eye (white) has been used for decades to selectively remove females before release in sterile insect technique programs and as an effective screening marker in genetic engineering. Bactrocera dorsalis is a representative tephritid pest causing damage to more than 150 fruit crops. Yet, the function of white in important biological processes remains unclear in B. dorsalis. In this study, the impacts of the white gene on electrophysiology and reproductive behaviour in B. dorsalis were tested. The results indicated that knocking out Bdwhite disrupted eye pigmentation in adults, consistent with previous reports. Bdwhite did not affect the antennal electrophysiology response to 63 chemical components with various structures. However, reproductive behaviours in both males and females were significantly reduced in Bdwhite−/−. Both pre-copulatory and copulation behaviours were significantly reduced in Bdwhite−/−, and the effect was male-specific. Mutant females significantly delayed their oviposition towards γ-octalactone, and the peak of oviposition behaviour towards orange juice was lost. These results show that Bdwhite might not be an ideal screening marker in functional gene research aiming to identify molecular targets for behaviour-modifying chemicals. Instead, owing to its strong effect on B. dorsalis sexual behaviours, the downstream genes regulated by Bdwhite or the genes from white-linked areas could be alternate molecular targets that promote the development of better behavioural modifying chemical-based pest management techniques.

几十年来,在不育昆虫技术项目中,关键表型白眼(白色)一直被用于在释放前选择性地去除雌性,并作为基因工程中的一种有效筛选标记。桔小实蝇是一种具有代表性的热带害虫,对150多种果树造成危害。然而,白色在重要的生物学过程中的作用在B.dorsalis中仍不清楚。在本研究中,测试了白色基因对B.dorsalis的电生理和生殖行为的影响。结果表明,敲除Bdwhite会破坏成年人眼睛的色素沉着,这与之前的报道一致。Bdwhite对63种不同结构的化学成分的触角电生理反应没有影响。然而,在Bdwhite-/-中,雄性和雌性的生殖行为都显著减少。Bdwhite-/-的交配前和交配行为都显著减少,而且这种影响是雄性特有的。突变雌性对γ-八内酯的产卵显著延迟,对橙汁的产卵行为峰值消失。这些结果表明,在功能基因研究中,Bdwhite可能不是一个理想的筛选标记,目的是识别行为改变化学物质的分子靶标。相反,由于其对B.dorsalis性行为的强烈影响,由Bdwhite调节的下游基因或来自白色连接区域的基因可能是促进开发更好的基于化学方法的行为改变害虫管理技术的替代分子靶点。
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引用次数: 0
Transcriptome analysis of Apis mellifera antennae reveals molecular divergence underlying the division of labour in worker bees 蜜蜂触角的转录组分析揭示了工蜂分工的分子差异。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-10-21 DOI: 10.1111/imb.12882
Bairu Liu, Yicong Xu, Weixing Zhang

The olfactory system plays a fundamental role in mediating insect behaviour. Worker bees exhibit an age-dependent division of labour, performing discrete sets of behaviours throughout their lifespan. The behavioural states of bees rely on their sense of the environment and chemical communication via their olfactory system, the antennae. However, the olfactory adaptation mechanism of worker bees during their behavioural development remains unclear. In this study, we conducted a comprehensive and quantitative analysis of antennal gene expression in the Apis mellifera of newly emerged workers, nurses, foragers and defenders using RNA-seq. We found that the antenna tissues of honey bees continued developing after transformation from newly emerged workers to adults. Additionally, we identified differentially expressed genes associated with bee development and division of labour. We validated that major royal jelly protein genes are highly and specifically expressed in nurse honey bee workers. Furthermore, we identified and validated significant alternative splicing events correlated with the development and division of labour. These findings provide a comprehensive transcriptome profile and a new perspective on the molecular mechanisms that may underlie the worker honey bee division of labour.

嗅觉系统在调节昆虫行为中起着重要作用。工蜂表现出与年龄相关的分工,在其一生中表现出一系列离散的行为。蜜蜂的行为状态依赖于它们对环境的感知和通过嗅觉系统(触角)进行的化学交流。然而,工蜂在行为发育过程中的嗅觉适应机制尚不清楚。在这项研究中,我们使用RNA-seq对新出现的工人、护士、觅食者和保卫者的蜜蜂触角基因表达进行了全面和定量的分析。我们发现,蜜蜂的触角组织在从新出现的工蜂转变为成虫后继续发育。此外,我们还鉴定了与蜜蜂发育和分工相关的差异表达基因。我们验证了主要蜂王浆蛋白基因在蜜蜂护理工作者中高度特异性表达。此外,我们确定并验证了与发育和分工相关的重要替代剪接事件。这些发现提供了一个全面的转录组图谱,并为工蜂分工的分子机制提供了新的视角。
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引用次数: 0
Opsin diversity and evolution in the Elateroidea superfamily: Insights from transcriptome data 鞘翅目超家族中的Opsin多样性和进化:转录组数据的见解。
IF 2.6 2区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-10-14 DOI: 10.1111/imb.12881
Danilo T. Amaral, Isabel A. S. Bonatelli

Vision plays a vital biological role in organisms, which depends on the visual pigment molecules (opsin plus chromophore). The expansion or reduction of spectral channels in the organisms is determined by distinct opsin classes and copy numbers resulting from duplication or loss. Within Coleoptera, the superfamily Elateroidea exhibits a great diversity of morphological and physiological characteristics, such as bioluminescence, making this group an important model for opsin studies. While molecular and physiological studies have been conducted in Lampyridae and Elateridae, other families remain unexplored. Here, we reused transcriptome datasets from Elateroidea species, including members of Elateridae, Lampyridae, Phengodidae, Rhagophthalmidae, Cantharidae, and Lycidae, to detect the diversity of putative opsin genes in this superfamily. In addition, we tested the signature of sites under positive selection in both ultraviolet (UV)- and long-wavelength (LW)-opsin classes. Although the visual system in Elateroidea is considered simple, we observed events of duplication in LW- and UV-opsin, as well as the absence of UV-opsin in distinct families, such as larval Phengodidae individuals. We detected different copies of LW-opsins that were highly expressed in the eyes of distinct tribes of fireflies, indicating the possible selection of each copy during the evolution of the sexual mating to avoid spectrum overlapping. In Elateridae, we found that the bioluminescent species had a distinct LW-opsin copy compared with the non-bioluminescent species, suggesting events of duplication and loss. The signature of positive selection showed only one residue associated with the chromophore binding site in the Elateroidea, which may produce a bathochromic shift in the wavelength absorption spectra in this family. Overall, this study brings important content and fills gaps regarding opsin evolution in Elateroidea.

视觉在生物体中起着至关重要的生物学作用,它依赖于视觉色素分子(视蛋白加发色团)。生物体中光谱通道的扩展或减少是由不同的视蛋白类别和复制或丢失产生的拷贝数决定的。在鞘翅目中,Elateroidea超科表现出巨大的形态和生理特征多样性,如生物发光,使该组成为视蛋白研究的重要模型。虽然已经对Lampyridae和Elateridae进行了分子和生理学研究,但其他家族仍有待探索。在这里,我们重复使用了Elateroidea物种的转录组数据集,包括Elateridae、Lampyridae、Phengodidae、Rhagophthalidae、Cantharidae和Lycidae的成员,以检测该超科中假定视蛋白基因的多样性。此外,我们测试了紫外线(UV)和长波长(LW)视蛋白类中阳性选择位点的特征。尽管Elateroidea的视觉系统被认为是简单的,但我们观察到LW-和UV视蛋白的重复事件,以及不同家族中UV视蛋白缺乏的情况,如黄颡鱼幼虫个体。我们检测到不同拷贝的LW视蛋白在不同萤火虫部落的眼睛中高度表达,这表明在性交配的进化过程中可能会选择每个拷贝,以避免光谱重叠。在Elateridae中,我们发现与非生物发光物种相比,生物发光物种具有不同的LW视蛋白拷贝,这表明发生了复制和丢失事件。阳性选择的特征显示,在Elateroidea中只有一个残基与发色团结合位点相关,这可能会在该家族的波长吸收光谱中产生色差。总之,本研究为Elateroidea视蛋白的进化提供了重要内容,填补了空白。
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Insect Molecular Biology
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