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SARS-CoV-2 Vaccination is Not Associated With Involuntary Childlessness in Female Healthcare Workers: A Multicenter Cohort Study SARS-CoV-2 疫苗接种与女性医护人员非自愿无子女无关:一项多中心队列研究
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-06-06 DOI: 10.1111/irv.13333
Tamara Dörr, Sabine Güsewell, Alexia Cusini, Angela Brucher, Stephan Goppel, Fabian Grässli, Elsbeth Betschon, J. Carsten Möller, Manuela Ortner, Markus Ruetti, Reto Stocker, Danielle Vuichard-Gysin, Ulrike Besold, Lorenz Risch, Matthias von Kietzell, Matthias Schlegel, Stefan P. Kuster, Christian R. Kahlert, Philipp Kohler, for the SURPRISE (SURveillance of infectious diseases among health Professionals In SwitzErland) Study Group

Background

There is debate about the causes of the recent birth rate decline in high-income countries worldwide. During the pandemic, concern about the effects on reproductive health has caused vaccine hesitancy. We investigated the association of SARS-CoV-2 vaccination and infection with involuntary childlessness.

Methods

Females in fertility age within a prospective multicenter cohort of healthcare workers (HCW) were followed since August 2020. Data on baseline health, SARS-CoV-2-infection, and vaccination were obtained and regularly updated, in which serum samples were collected repetitively and screened for anti-nucleocapsid and anti-spike antibodies. In October 2023, participants indicated the presence of involuntary childlessness with onset during the pandemic, whereas those indicating an onset before the pandemic were excluded. The association of involuntary childlessness and SARS-CoV-2-vaccination and infection was investigated using univariable and multivariable analysis. Sensitivity analysis was performed to compare those reporting involuntary childlessness with those birthing a child since 2020.

Results

Of 798 participants, 26 (3.2%) reported involuntary childlessness starting since the pandemic. Of the involuntary childless women, 73.1% (19/26) were vaccinated compared to 86.0% (664/772) without involuntary childlessness (p = 0.73). SARS-CoV-2 infection was reported by 76.9% (20/26) compared to 72.4% (559/772) of controls (p = 0.64). Neither SARS-CoV-2 vaccination (aOR 0.91 per dose, 95%CI 0.67–1.26) nor infection (aOR per infection 1.05, 95%CI 0.62–1.71) was associated with involuntary childlessness. Sensitivity analysis confirmed these results.

Conclusions

Among female HCW of fertility age, 3.2% indicated involuntary childlessness, which is comparable to pre-pandemic data. No association between involuntary childlessness and SARS-CoV-2 vaccination or infection was found.

背景:关于近期全球高收入国家出生率下降的原因存在争议。在疫情流行期间,由于担心对生殖健康的影响,人们对接种疫苗犹豫不决。我们调查了 SARS-CoV-2 疫苗接种和感染与非自愿无子女的关系:方法:自 2020 年 8 月起,我们对医疗保健工作者(HCW)多中心前瞻性队列中的育龄女性进行了跟踪调查。方法:自 2020 年 8 月起,对医护人员(HCW)中处于生育年龄的女性进行前瞻性多中心队列随访,获取并定期更新有关基线健康、SARS-CoV-2 感染和疫苗接种的数据,并重复采集血清样本,筛查抗核头状病毒抗体和抗尖峰抗体。2023 年 10 月,参与者表示非自愿无子女,并在大流行期间发病,而那些表示在大流行之前发病的人则被排除在外。通过单变量和多变量分析,研究了非自愿生育与 SARS-CoV-2 疫苗接种和感染的关系。还进行了敏感性分析,将报告非自愿无子女者与 2020 年以来生育子女者进行了比较:在 798 名参与者中,有 26 人(3.2%)报告自大流行后开始非自愿无子女。在非自愿无子女的妇女中,73.1%(19/26)已接种疫苗,而非自愿无子女妇女的接种率为 86.0%(664/772)(p = 0.73)。报告感染 SARS-CoV-2 的比例为 76.9%(20/26),而对照组为 72.4%(559/772)(p = 0.64)。接种 SARS-CoV-2 疫苗(每剂 aOR 0.91,95%CI 0.67-1.26)或感染(每感染 aOR 1.05,95%CI 0.62-1.71)均与非自愿无子女无关。敏感性分析证实了这些结果:结论:在育龄女性人机工程人员中,3.2%的人表示非自愿无子女,这与疫前的数据相当。非自愿生育与 SARS-CoV-2 疫苗接种或感染之间没有关联。
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引用次数: 0
Coronary and Cerebrovascular Events and Exacerbation of Existing Conditions After Laboratory-Confirmed Influenza Infection Among US Veterans: A Self-Controlled Case Series Study 美国退伍军人在实验室确诊感染流感后发生冠状动脉和脑血管事件以及现有病症加重:一项自我控制病例系列研究
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-06-06 DOI: 10.1111/irv.13304
Caroline Korves, Nabin Neupane, Jeremy Smith, Yinong Young-Xu, Robertus van Aalst, Salaheddin M. Mahmud, Matthew M. Loiacono

Background

Influenza may contribute to coronary/cerebrovascular events and exacerbate underlying conditions.

Methods

We used self-controlled case series (SCCS) design to analyze data from US Veterans ≥18 years with coronary/cerebrovascular or exacerbation event +/−1 year of lab-confirmed influenza (LCI) during 2010–2018. We estimated the incidence ratio (IR) (95% CI) of the event for risk interval (Days 1–7 post-LCI) versus control interval (all other times +/−1 year of LCI) with fixed-effects conditional Poisson regression. We included biomarker data for mediation analysis.

Results

We identified 3439 episodes with coronary/cerebrovascular-related hospitalizations. IRs (95% CI) for LCI risk versus control interval were STEMI 0.6 (0.1, 4.4), NSTEMI 7.3 (5.8, 9.2), ischemic stroke 4.0 (3.0, 5.4), hemorrhagic stroke 6.2 (3.4, 11.5), and coronary spasm 1.3 (0.5, 3.0). IR significantly increased for NSTEMI and ischemic stroke among those ≥ 65 years. IR for NSTEMI and ischemic stroke dropped 26% and 10%, respectively, when white blood cell (WBC) and platelet count were considered. LCI was significantly associated with exacerbation of preexisting asthma, chronic obstructive pulmonary disease, and congestive heart failure.

Conclusions

We found significant association between LCI and hospitalization for NSTEMI, ischemic stroke, and hemorrhagic stroke, the latter possibly due to unaccounted time-varying confounding in SCCS design.

背景:流感可能会导致冠状动脉/脑血管事件,并加重基础疾病:我们采用自控病例系列(SCCS)设计分析了2010-2018年期间≥18岁的美国退伍军人的数据,这些退伍军人在实验室确诊流感(LCI)后+/-1年内发生了冠心病/脑血管事件或病情恶化。我们使用固定效应条件泊松回归估算了风险区间(LCI 后第 1-7 天)与对照区间(LCI +/-1 年的所有其他时间)的事件发生率比 (IR) (95% CI)。我们纳入了生物标志物数据进行中介分析:我们确定了 3439 例冠心病/脑血管相关住院病例。LCI风险与对照区间的IR(95% CI)分别为:STEMI 0.6(0.1,4.4),NSTEMI 7.3(5.8,9.2),缺血性卒中 4.0(3.0,5.4),出血性卒中 6.2(3.4,11.5),冠状动脉痉挛 1.3(0.5,3.0)。在≥65 岁的人群中,NSTEMI 和缺血性卒中的 IR 明显增加。如果考虑白细胞(WBC)和血小板计数,NSTEMI 和缺血性中风的 IR 分别下降 26% 和 10%。LCI与原有哮喘、慢性阻塞性肺病和充血性心力衰竭的加重有明显相关性:结论:我们发现LCI与NSTEMI、缺血性中风和出血性中风的住院治疗有明显关系,后者可能是由于SCCS设计中未考虑时变混杂因素所致。
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引用次数: 0
Nirsevimab Effectiveness Against Cases of Respiratory Syncytial Virus Bronchiolitis Hospitalised in Paediatric Intensive Care Units in France, September 2023–January 2024 2023 年 9 月至 2024 年 1 月期间,Nirsevimab 对法国儿科重症监护病房住院呼吸道合胞病毒支气管炎病例的疗效。
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-06-05 DOI: 10.1111/irv.13311
Juliette Paireau, Cécile Durand, Sylvain Raimbault, Joséphine Cazaubon, Guillaume Mortamet, Delphine Viriot, Christophe Milesi, Elise Daudens-Vaysse, Dominique Ploin, Sabrina Tessier, Noémie Vanel, Jean-Loup Chappert, Karine Levieux, Ronan Ollivier, Jamel Daoudi, Bruno Coignard, Stéphane Leteurtre, Isabelle Parent-du-Châtelet, Sophie Vaux

In September 2023, France was one of the first countries that started a national immunisation campaign with nirsevimab, a new monoclonal antibody against respiratory syncytial virus (RSV). Using data from a network of paediatric intensive care units (PICUs), we aimed to estimate nirsevimab effectiveness against severe cases of RSV bronchiolitis in France. We conducted a case–control study based on the test-negative design and included 288 infants reported by 20 PICUs. We estimated nirsevimab effectiveness at 75.9% (48.5–88.7) in the main analysis and 80.6% (61.6–90.3) and 80.4% (61.7–89.9) in two sensitivity analyses. These real-world estimates confirmed the efficacy observed in clinical studies.

2023 年 9 月,法国成为首批开始使用 nirsevimab(一种新型抗呼吸道合胞病毒(RSV)单克隆抗体)进行全国免疫接种的国家之一。我们利用来自儿科重症监护病房(PICU)网络的数据,旨在估算涅舍维单抗对法国 RSV 支气管炎重症病例的疗效。我们进行了一项基于阴性试验设计的病例对照研究,纳入了 20 个 PICU 报告的 288 名婴儿。在主要分析中,我们估计 nirsevimab 的有效率为 75.9% (48.5-88.7);在两项敏感性分析中,我们估计 nirsevimab 的有效率分别为 80.6% (61.6-90.3) 和 80.4% (61.7-89.9)。这些真实世界的估计值证实了临床研究中观察到的疗效。
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引用次数: 0
High SARS-CoV-2 Exposure in Rural Southern Mozambique After Four Waves of COVID-19: Community-Based Seroepidemiological Surveys 莫桑比克南部农村地区在四次 COVID-19 之后的 SARS-CoV-2 高暴露率:基于社区的血清流行病学调查
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-06-05 DOI: 10.1111/irv.13332
Áuria de Jesus, Rita Ernesto, Arsénia J. Massinga, Felizarda Nhacolo, Khátia Munguambe, Alcido Timana, Arsénio Nhacolo, Augusto Messa Jr., Sérgio Massora, Valdemiro Escola, Sónia Enosse, Rufino Gunjamo, Carlos Funzamo, Jason M. Mwenda, Joseph Okeibunor, Alberto Garcia-Basteiro, Caterina Guinovart, Alfredo Mayor, Inácio Mandomando

Background

Mozambique was one of many African countries with limited testing capacity for SARS-CoV-2. Serosurveys, an alternative to estimate the real exposure to understand the epidemiology and transmission dynamics, have been scarce in Mozambique. Herein, we aimed to estimate the age-specific seroprevalence of SARS-CoV-2 in the general population of the Manhiça District, at four time points, for evaluating dynamics of exposure and the impact of vaccination.

Methods

We conducted four community-based seroepidemiological surveys separated by 3 months between May 2021 and June 2022 to assess the prevalence of SARS-CoV-2 antibodies. An age-stratified (0–19, 20–39, 40–59, and ≥ 60 years) sample of 4810 individuals was randomly selected from demographic surveillance database, and their blood samples were analyzed using WANTAI SARS-CoV-2 IgG + IgM ELISA. Nasopharyngeal swabs from a subsample of 2209 participants were also assessed for active infection by RT-qPCR.

Results

SARS-CoV-2 seroprevalence increased from 27.6% in the first survey (May 2021) to 63.6%, 91.2%, and 91.1% in the second (October 2021), third (January 2022), and fourth (May 2022) surveys, respectively. Seroprevalence in individuals < 18 years, who were not eligible for vaccination, increased from 23.1% in the first survey to 87.1% in the fourth. The prevalence of active infection was below 10.1% in all surveys.

Conclusions

A high seroprevalence to SARS-CoV-2 was observed in the study population, including individuals not eligible for vaccination at that time, particularly after circulation of the highly transmissible Delta variant. These data are important to inform decision making on the vaccination strategies in the context of pandemic slowdown in Mozambique.

背景 莫桑比克是 SARS-CoV-2 检测能力有限的许多非洲国家之一。在莫桑比克,血清调查是估算真实接触率以了解流行病学和传播动态的另一种方法,但这种方法在莫桑比克很少见。在此,我们旨在估算曼希萨区普通人群在四个时间点的 SARS-CoV-2 特定年龄血清流行率,以评估暴露动态和疫苗接种的影响。 方法 我们在 2021 年 5 月至 2022 年 6 月期间进行了四次社区血清流行病学调查,每次间隔 3 个月,以评估 SARS-CoV-2 抗体的流行情况。我们从人口监测数据库中随机抽取了4810人作为年龄分层样本(0-19岁、20-39岁、40-59岁和≥60岁),并使用WANTAI SARS-CoV-2 IgG + IgM ELISA对他们的血样进行了分析。此外,还通过 RT-qPCR 对 2209 名参与者的鼻咽拭子进行了活动性感染评估。 结果 SARS-CoV-2 血清流行率从第一次调查(2021 年 5 月)的 27.6%,分别上升到第二次调查(2021 年 10 月)、第三次调查(2022 年 1 月)和第四次调查(2022 年 5 月)的 63.6%、91.2% 和 91.1%。不符合接种条件的 18 岁人群的血清流行率从第一次调查的 23.1%上升到第四次调查的 87.1%。在所有调查中,活动性感染率均低于 10.1%。 结论 在研究人群中观察到 SARS-CoV-2 的高血清流行率,包括当时不符合疫苗接种条件的人,尤其是在高传播性的 Delta 变种流行之后。这些数据对于在莫桑比克疫情减缓的背景下制定疫苗接种策略非常重要。
{"title":"High SARS-CoV-2 Exposure in Rural Southern Mozambique After Four Waves of COVID-19: Community-Based Seroepidemiological Surveys","authors":"Áuria de Jesus,&nbsp;Rita Ernesto,&nbsp;Arsénia J. Massinga,&nbsp;Felizarda Nhacolo,&nbsp;Khátia Munguambe,&nbsp;Alcido Timana,&nbsp;Arsénio Nhacolo,&nbsp;Augusto Messa Jr.,&nbsp;Sérgio Massora,&nbsp;Valdemiro Escola,&nbsp;Sónia Enosse,&nbsp;Rufino Gunjamo,&nbsp;Carlos Funzamo,&nbsp;Jason M. Mwenda,&nbsp;Joseph Okeibunor,&nbsp;Alberto Garcia-Basteiro,&nbsp;Caterina Guinovart,&nbsp;Alfredo Mayor,&nbsp;Inácio Mandomando","doi":"10.1111/irv.13332","DOIUrl":"https://doi.org/10.1111/irv.13332","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Mozambique was one of many African countries with limited testing capacity for SARS-CoV-2. Serosurveys, an alternative to estimate the real exposure to understand the epidemiology and transmission dynamics, have been scarce in Mozambique. Herein, we aimed to estimate the age-specific seroprevalence of SARS-CoV-2 in the general population of the Manhiça District, at four time points, for evaluating dynamics of exposure and the impact of vaccination.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We conducted four community-based seroepidemiological surveys separated by 3 months between May 2021 and June 2022 to assess the prevalence of SARS-CoV-2 antibodies. An age-stratified (0–19, 20–39, 40–59, and ≥ 60 years) sample of 4810 individuals was randomly selected from demographic surveillance database, and their blood samples were analyzed using WANTAI SARS-CoV-2 IgG + IgM ELISA. Nasopharyngeal swabs from a subsample of 2209 participants were also assessed for active infection by RT-qPCR.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>SARS-CoV-2 seroprevalence increased from 27.6% in the first survey (May 2021) to 63.6%, 91.2%, and 91.1% in the second (October 2021), third (January 2022), and fourth (May 2022) surveys, respectively. Seroprevalence in individuals &lt; 18 years, who were not eligible for vaccination, increased from 23.1% in the first survey to 87.1% in the fourth. The prevalence of active infection was below 10.1% in all surveys.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>A high seroprevalence to SARS-CoV-2 was observed in the study population, including individuals not eligible for vaccination at that time, particularly after circulation of the highly transmissible Delta variant. These data are important to inform decision making on the vaccination strategies in the context of pandemic slowdown in Mozambique.</p>\u0000 </section>\u0000 </div>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 6","pages":""},"PeriodicalIF":4.4,"publicationDate":"2024-06-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/irv.13332","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141251427","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
SARS-CoV-2 Seroprevalence Trends in the Netherlands in the Variant of Concern Era: Input for Future Response 荷兰在关注变异体时代的 SARS-CoV-2 血清流行趋势:为未来应对措施提供参考
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-06-04 DOI: 10.1111/irv.13312
Eric R. A. Vos, Cheyenne C. E. van Hagen, Denise Wong, Gaby Smits, Marjan Kuijer, Alienke J. Wijmenga-Monsuur, Joanna Kaczorowska, Robert S. van Binnendijk, Fiona R. M. van der Klis, Gerco den Hartog, Hester E. de Melker

Background

To inform future response planning we aimed to assess SARS-CoV-2 trends in infection- and/or vaccine-induced immunity, including breakthrough infections, among (sub)groups, professions and regions in the Dutch population during the Variant of Concern (VOC)-era.

Methods

In this prospective population-based cohort, randomly selected participants (n = 9985) aged 1–92 years (recruited early-2020) donated home-collected fingerstick-blood samples at six timepoints in 2021/2022, covering waves dominated by Alpha, Delta, and multiple Omicron (sub-)variants. IgG antibody assessment against Spike-S1 and Nucleoprotein was combined with vaccination- and testing data to estimate infection-induced (inf) and total (infection- and vaccination-induced) seroprevalence.

Results

Nationwide inf-seroprevalence rose modestly from 12% (95% CI 11–13) since Alpha to 26% (95% CI 24–28) amidst Delta, while total seroprevalence increased rapidly to 87% (95% CI 85–88), particularly in elderly and those with comorbidities (i.e., vulnerable groups). Interestingly, highest infection rates were noticeable among low/middle educated elderly, non-Western, those in contact professions, adolescents and young adults, and in low-vaccination coverage regions. Following Omicron emergence, inf-seroprevalence elevated sharply to 62% (95% CI 59–65) and further to 86% (95% CI 83–90) in late-2022, with frequent breakthrough infections and decreasing seroprevalence dissimilarities between most groups. Whereas > 90% of < 60-year-olds had been infected at least once, 30% of vaccinated vulnerable individuals had still not acquired hybrid immunity.

Conclusions

Groups identified to have been infected disproportionally during the acute phase of the pandemic require specific attention in evaluation of control measures and future response planning worldwide. Furthermore, ongoing tailored vaccination efforts and (sero-)monitoring of vulnerable groups may remain important.

背景 为了给未来的应对计划提供信息,我们旨在评估荷兰人口中(亚)群体、职业和地区在关注变异体(VOC)时代的 SARS-CoV-2 感染和/或疫苗诱导免疫(包括突破性感染)趋势。 方法 在这个基于人群的前瞻性队列中,随机抽取了 1-92 岁的参与者(n = 9985)(2020 年初招募),他们在 2021/2022 年的六个时间点捐献了家庭采集的指血样本,涵盖了以 Alpha、Delta 和多个 Omicron(亚)变异为主的波段。针对 Spike-S1 和 Nucleoprotein 的 IgG 抗体评估与疫苗接种和检测数据相结合,以估算感染诱发的血清流行率(inf)和总血清流行率(感染和疫苗接种诱发)。 结果 全国inf血清流行率从阿尔法以来的12%(95% CI 11-13)小幅上升至德尔塔期间的26%(95% CI 24-28),而总血清流行率迅速上升至87%(95% CI 85-88),尤其是在老年人和有合并症的人(即弱势群体)中。有趣的是,中低学历老年人、非西方人、从事接触性职业的人、青少年和年轻人以及疫苗接种覆盖率低的地区的感染率最高。奥米克龙出现后,婴儿血清流行率急剧上升至 62%(95% CI 59-65),到 2022 年底进一步上升至 86%(95% CI 83-90),突破性感染频繁发生,大多数群体之间的血清流行率差异不断缩小。90%的 60 岁老人至少感染过一次,而 30% 接种过疫苗的易感人群仍未获得混合免疫力。 结论 在大流行的急性期,被发现感染比例过高的群体需要在评估控制措施和未来全球应对计划时予以特别关注。此外,对易感人群进行有针对性的疫苗接种和(血清)监测可能仍然很重要。
{"title":"SARS-CoV-2 Seroprevalence Trends in the Netherlands in the Variant of Concern Era: Input for Future Response","authors":"Eric R. A. Vos,&nbsp;Cheyenne C. E. van Hagen,&nbsp;Denise Wong,&nbsp;Gaby Smits,&nbsp;Marjan Kuijer,&nbsp;Alienke J. Wijmenga-Monsuur,&nbsp;Joanna Kaczorowska,&nbsp;Robert S. van Binnendijk,&nbsp;Fiona R. M. van der Klis,&nbsp;Gerco den Hartog,&nbsp;Hester E. de Melker","doi":"10.1111/irv.13312","DOIUrl":"https://doi.org/10.1111/irv.13312","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>To inform future response planning we aimed to assess SARS-CoV-2 trends in infection- and/or vaccine-induced immunity, including breakthrough infections, among (sub)groups, professions and regions in the Dutch population during the Variant of Concern (VOC)-era.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>In this prospective population-based cohort, randomly selected participants (<i>n</i> = 9985) aged 1–92 years (recruited early-2020) donated home-collected fingerstick-blood samples at six timepoints in 2021/2022, covering waves dominated by Alpha, Delta, and multiple Omicron (sub-)variants. IgG antibody assessment against Spike-S1 and Nucleoprotein was combined with vaccination- and testing data to estimate infection-induced (inf) and total (infection- and vaccination-induced) seroprevalence.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Nationwide inf-seroprevalence rose modestly from 12% (95% CI 11–13) since Alpha to 26% (95% CI 24–28) amidst Delta, while total seroprevalence increased rapidly to 87% (95% CI 85–88), particularly in elderly and those with comorbidities (i.e., vulnerable groups). Interestingly, highest infection rates were noticeable among low/middle educated elderly, non-Western, those in contact professions, adolescents and young adults, and in low-vaccination coverage regions. Following Omicron emergence, inf-seroprevalence elevated sharply to 62% (95% CI 59–65) and further to 86% (95% CI 83–90) in late-2022, with frequent breakthrough infections and decreasing seroprevalence dissimilarities between most groups. Whereas &gt; 90% of &lt; 60-year-olds had been infected at least once, 30% of vaccinated vulnerable individuals had still not acquired hybrid immunity.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Groups identified to have been infected disproportionally during the acute phase of the pandemic require specific attention in evaluation of control measures and future response planning worldwide. Furthermore, ongoing tailored vaccination efforts and (sero-)monitoring of vulnerable groups may remain important.</p>\u0000 </section>\u0000 </div>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 6","pages":""},"PeriodicalIF":4.4,"publicationDate":"2024-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/irv.13312","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141251371","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Time to SARS-CoV-2 clearance in African, Caucasian, and Asian ethnic groups 非洲人、高加索人和亚洲人清除 SARS-CoV-2 的时间
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-06-04 DOI: 10.1111/irv.13238
Louis Sides Ndjengue Nson, Daniella Ndombi Delpo Dede, Fabrice Lotola Mougeni, Natacha Bouassa, Basma Bennjakhoukh, Alexandra Luthi, Anselme Voubou, Juliette Atatama, Raymond Tat Pambou, Guy Dieudonné Mvogo, Victorien Sah, Bertin Atangana, Amandine Mveang Nzoghe, Anicet Christel Maloupazoa Siawaya, Paulin N. Essone, Pélagie Mougola Bissiengou, Bénédicte Ndeboko, Joel Fleury Djoba Siawaya

Background

COVID-19 may become a seasonal disease. SARS-CoV-2 active circulation coupled with vaccination efforts has undoubtedly modified the virus dynamic. It is therefore important investigate SARS-CoV-2 dynamic in different groups of population following the course of spatiotemporal variance and immunization.

Methods

To investigate SARS-CoV-2 clearance in different ethnic groups and the impact of immunization, we recruited 777 SARS-CoV-2-positive patients (570 Africans, 156 Caucasians, and 51 Asians). Participants were followed and regularly tested for 2 months until they had two negative tests.

Results

The vaccination rate was 64.6%. African individuals were less symptomatic (2%), Caucasians (41%) and Asians (36.6%). On average, viral clearance occurred after 10.5 days. Viral load at diagnosis was inversely correlated with viral clearance (p < 0.0001). The time of SARS-CoV-2 clearance was higher in Africans and Caucasians than in Asians (Dunn's test p < 0.0001 and p < 0.05, respectively). On average, viral clearance occurred within 9.5 days during the second semester (higher rate of vaccination and SARS-CoV-2 exposition), whereas it took 13.6 days during the first semester (lower rate of vaccination and SARS-CoV-2 exposition) (Mann–Whitney t-test p < 0.0001).

Conclusion

In conclusion, ethnicity and spatiotemporal changes including SARS-CoV-2 exposition and immunization affect SARS-CoV-2 clearance.

背景 COVID-19 可能成为一种季节性疾病。SARS-CoV-2 的活跃循环和疫苗接种工作无疑改变了病毒的动态。因此,随着时空变化和免疫接种的进行,调查不同人群中 SARS-CoV-2 的动态非常重要。 方法 为了调查不同种族群体的 SARS-CoV-2 清除情况以及免疫接种的影响,我们招募了 777 名 SARS-CoV-2 阳性患者(570 名非洲人、156 名白种人和 51 名亚洲人)。我们对参与者进行了为期 2 个月的跟踪和定期检测,直到检测结果两次呈阴性为止。 结果 疫苗接种率为 64.6%。非洲人(2%)、白种人(41%)和亚洲人(36.6%)的症状较轻。病毒平均在 10.5 天后清除。诊断时的病毒载量与病毒清除率成反比(p < 0.0001)。非洲人和白种人的 SARS-CoV-2 清除时间高于亚洲人(邓恩检验 p < 0.0001 和 p < 0.05)。第二学期(疫苗接种率和 SARS-CoV-2 暴露率较高)平均在 9.5 天内清除病毒,而第一学期(疫苗接种率和 SARS-CoV-2 暴露率较低)则需要 13.6 天(Mann-Whitney t 检验 p < 0.0001)。 结论 总之,种族和时空变化(包括 SARS-CoV-2 暴露和免疫接种)会影响 SARS-CoV-2 清除率。
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引用次数: 0
Detection of Novel Influenza Viruses Through Community and Healthcare Testing: Implications for Surveillance Efforts in the United States 通过社区和医疗保健检测发现新型流感病毒:对美国监测工作的影响》。
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-05-26 DOI: 10.1111/irv.13315
Sinead E. Morris, Matthew Gilmer, Ryan Threlkel, Lynnette Brammer, Alicia P. Budd, A. Danielle Iuliano, Carrie Reed, Matthew Biggerstaff

Background

Novel influenza viruses pose a potential pandemic risk, and rapid detection of infections in humans is critical to characterizing the virus and facilitating the implementation of public health response measures.

Methods

We use a probabilistic framework to estimate the likelihood that novel influenza virus cases would be detected through testing in different community and healthcare settings (urgent care, emergency department, hospital, and intensive care unit [ICU]) while at low frequencies in the United States. Parameters were informed by data on seasonal influenza virus activity and existing testing practices.

Results

In a baseline scenario reflecting the presence of 100 novel virus infections with similar severity to seasonal influenza viruses, the median probability of detecting at least one infection per month was highest in urgent care settings (72%) and when community testing was conducted at random among the general population (77%). However, urgent care testing was over 15 times more efficient (estimated as the number of cases detected per 100,000 tests) due to the larger number of tests required for community testing. In scenarios that assumed increased clinical severity of novel virus infection, median detection probabilities increased across all healthcare settings, particularly in hospitals and ICUs (up to 100%) where testing also became more efficient.

Conclusions

Our results suggest that novel influenza virus circulation is likely to be detected through existing healthcare surveillance, with the most efficient testing setting impacted by the disease severity profile. These analyses can help inform future testing strategies to maximize the likelihood of novel influenza detection.

背景:新型流感病毒具有潜在的大流行风险,快速检测出人类感染病例对于确定病毒特征和促进公共卫生应对措施的实施至关重要:方法:我们采用概率框架来估算新型流感病毒病例在美国不同社区和医疗机构(紧急护理、急诊科、医院和重症监护室[ICU])中低频检测到的可能性。检测参数参考了季节性流感病毒活动数据和现有检测方法:结果:在反映存在 100 种新型病毒感染且严重程度与季节性流感病毒相似的基线情况下,每月至少检测出一种感染的中位概率在急诊医疗机构(72%)和在普通人群中随机进行社区检测时(77%)最高。然而,由于社区检测所需的检测次数较多,紧急护理检测的效率(按每 10 万次检测发现的病例数估算)要高出 15 倍以上。在假定新型病毒感染的临床严重程度增加的情况下,所有医疗机构的检测概率中位数都有所增加,尤其是医院和重症监护室(高达 100%)的检测效率更高:我们的研究结果表明,新型流感病毒循环有可能通过现有的医疗保健监测发现,最有效的检测环境受疾病严重程度的影响。这些分析有助于为未来的检测策略提供信息,从而最大限度地提高新型流感检测的可能性。
{"title":"Detection of Novel Influenza Viruses Through Community and Healthcare Testing: Implications for Surveillance Efforts in the United States","authors":"Sinead E. Morris,&nbsp;Matthew Gilmer,&nbsp;Ryan Threlkel,&nbsp;Lynnette Brammer,&nbsp;Alicia P. Budd,&nbsp;A. Danielle Iuliano,&nbsp;Carrie Reed,&nbsp;Matthew Biggerstaff","doi":"10.1111/irv.13315","DOIUrl":"10.1111/irv.13315","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Novel influenza viruses pose a potential pandemic risk, and rapid detection of infections in humans is critical to characterizing the virus and facilitating the implementation of public health response measures.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We use a probabilistic framework to estimate the likelihood that novel influenza virus cases would be detected through testing in different community and healthcare settings (urgent care, emergency department, hospital, and intensive care unit [ICU]) while at low frequencies in the United States. Parameters were informed by data on seasonal influenza virus activity and existing testing practices.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>In a baseline scenario reflecting the presence of 100 novel virus infections with similar severity to seasonal influenza viruses, the median probability of detecting at least one infection per month was highest in urgent care settings (72%) and when community testing was conducted at random among the general population (77%). However, urgent care testing was over 15 times more efficient (estimated as the number of cases detected per 100,000 tests) due to the larger number of tests required for community testing. In scenarios that assumed increased clinical severity of novel virus infection, median detection probabilities increased across all healthcare settings, particularly in hospitals and ICUs (up to 100%) where testing also became more efficient.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our results suggest that novel influenza virus circulation is likely to be detected through existing healthcare surveillance, with the most efficient testing setting impacted by the disease severity profile. These analyses can help inform future testing strategies to maximize the likelihood of novel influenza detection.</p>\u0000 </section>\u0000 </div>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 5","pages":""},"PeriodicalIF":4.4,"publicationDate":"2024-05-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/irv.13315","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141154571","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Seroprevalence of Protective Antibodies Against Influenza and the Reduction of the Influenza Incidence Rate: An Annual Repeated Cross-Sectional Study From 2014 to 2019 流感保护性抗体的血清流行率与流感发病率的降低:2014年至2019年年度重复横断面研究》。
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-05-26 DOI: 10.1111/irv.13307
Raquel Guiomar, Susana Pereira da Silva, Inês Costa, Patricia Conde, Paula Cristóvão, Ana Paula Rodrigues, Aida Fernandes, Ana Paula Dias, Ana Rita Couto, Angélica Ramos, Carina Moita, Carina Rodrigues, Fátima Vale, Filomena Caldeira, Jácome Bruges Armas, João Pereira-Vaz, José Alves, Ludivina Freitas, Luis Martins, Luís Milho, Luisa Mota-Vieira, Lurdes Lopes, Margarida Freitas, Maria Ana Pessanha, Maria Correia, Maria Helena Marques, Maria João Cardoso, Maria João Peres, Mário Cunha, Patricia Amantegui, Paula Mota, Paulo Lopes, Paulo Pereira, Regina Viseu, Rita Cabral, Rita Côrte-Real, Sofia Almeida, Vânia Soares, Kamal Mansinho, Olav Hungnes, Baltazar Nunes

Background

Seroepidemiological studies provide estimates of population-level immunity, prevalence/incidence of infections, and evaluation of vaccination programs. We assessed the seroprevalence of protective antibodies against influenza and evaluated the correlation of seroprevalence with the cumulative annual influenza incidence rate.

Methods

We conducted an annual repeated cross-sectional seroepidemiological survey, during June–August, from 2014 to 2019, in Portugal. A total of 4326 sera from all age groups, sex, and regions was tested by hemagglutination inhibition assay. Seroprevalence and geometric mean titers (GMT) of protective antibodies against influenza were assessed by age group, sex, and vaccine status (65+ years old). The association between summer annual seroprevalence and the difference of influenza incidence rates between one season and the previous one was measured by Pearson correlation coefficient (r).

Results

Significant differences in seroprevalence of protective antibodies against influenza were observed in the population. Higher seroprevalence and GMT for A(H1N1)pdm09 and A(H3N2) were observed in children (5–14); influenza B seroprevalence in adults 65+ was 1.6–4.4 times than in children (0–4). Vaccinated participants (65+) showed significant higher seroprevalence/GMT for influenza. A strong negative and significant correlation was found between seroprevalence and ILI incidence rate for A(H1N1)pdm09 in children between 5 and 14 (r = −0.84; 95% CI, −0.98 to −0.07); a weak negative correlation was observed for A(H3N2) and B/Yamagata (r ≤ −0.1).

Conclusions

The study provides new insight into the anti-influenza antibodies seroprevalence measured in summer on the ILI incidence rate in the next season and the need for adjusted preventive health care measures to prevent influenza infection and transmission.

背景:血清流行病学研究可估算人群免疫力、感染率/发病率,并对疫苗接种计划进行评估。我们评估了针对流感的保护性抗体的血清流行率,并评估了血清流行率与流感累积年发病率的相关性:方法:我们于2014年至2019年每年6月至8月期间在葡萄牙进行了一次重复性横断面血清流行病学调查。通过血凝抑制试验检测了来自各年龄组、性别和地区的 4 326 份血清。按年龄组、性别和疫苗接种情况(65 岁以上)评估了血清流行率和流感保护性抗体的几何平均滴度(GMT)。用皮尔逊相关系数(r)测量了夏季血清年流行率与上一季度流感发病率差异之间的关系:结果:人群中流感保护性抗体的血清流行率存在显著差异。儿童(5-14 岁)的甲型 H1N1 pdm09 和甲型 H3N2 血清阳性率和格林尼治标准时间均较高;65 岁以上成人的乙型流感血清阳性率是儿童(0-4 岁)的 1.6-4.4 倍。接种疫苗的参与者(65 岁以上)的流感血清流行率/GMT 显著较高。在 5-14 岁儿童中,甲型 H1N1 pdm09 的血清流行率与 ILI 发病率之间存在明显的负相关(r = -0.84; 95% CI, -0.98 to -0.07);甲型 H3N2 和乙型/山形流感的血清流行率与 ILI 发病率之间存在微弱的负相关(r ≤ -0.1):该研究为夏季测定的抗流感抗体血清阳性率对下一季流感发病率的影响以及调整预防性保健措施以防止流感感染和传播的必要性提供了新的见解。
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引用次数: 0
Interim 2023/2024 Season Influenza Vaccine Effectiveness in Primary and Secondary Care in the United Kingdom 英国 2023/2024 年流感季节初级和二级护理中流感疫苗的临时有效性。
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-05-21 DOI: 10.1111/irv.13284
Heather Whitaker, Beth Findlay, Jana Zitha, Rosalind Goudie, Katie Hassell, Josie Evans, Panoraia Kalapotharakou, Utkarsh Agrawal, Beatrix Kele, Mark Hamilton, Catherine Moore, Rachel Byford, Julia Stowe, Chris Robertson, Anastasia Couzens, Gavin Jamie, Katja Hoschler, Kathleen Pheasant, Elizabeth Button, Catherine Quinot, Tim Jones, Sneha Anand, Conall Watson, Nick Andrews, Simon de Lusignan, Maria Zambon, Christopher Williams, Simon Cottrell, Kimberly Marsh, Jim McMenamin, Jamie Lopez Bernal

Background

We report 2023/2024 season interim influenza vaccine effectiveness for three studies, namely, primary care in Great Britain, hospital settings in Scotland and hospital settings in England.

Methods

A test negative design was used to estimate vaccine effectiveness.

Results

Estimated vaccine effectiveness against all influenzas ranged from 63% (95% confidence interval 46 to 75%) to 65% (41 to 79%) among children aged 2–17, from 36% (20 to 49%) to 55% (43 to 65%) among adults 18–64 and from 40% (29 to 50%) to 55% (32 to 70%) among adults aged 65 and over.

Conclusions

During a period of co-circulation of influenza A(H1N1)pdm09 and A(H3N2) in the United Kingdom, evidence for effectiveness of the influenza vaccine in both children and adults was found.

背景:我们报告了三项研究的 2023/2024 季度中期流感疫苗有效性,即英国的初级保健、苏格兰的医院环境和英格兰的医院环境:方法:采用阴性试验设计来估计疫苗效果:在 2-17 岁的儿童中,疫苗对所有流感的估计有效率为 63%(95% 置信区间为 46% 至 75%)至 65%(41% 至 79%);在 18-64 岁的成年人中,疫苗对所有流感的估计有效率为 36%(20% 至 49%)至 55%(43% 至 65%);在 65 岁及以上的成年人中,疫苗对所有流感的估计有效率为 40%(29% 至 50%)至 55%(32% 至 70%):结论:在甲型 H1N1 pdm09 流感和甲型 H3N2 流感在英国同时流行期间,有证据表明流感疫苗对儿童和成人都有效。
{"title":"Interim 2023/2024 Season Influenza Vaccine Effectiveness in Primary and Secondary Care in the United Kingdom","authors":"Heather Whitaker,&nbsp;Beth Findlay,&nbsp;Jana Zitha,&nbsp;Rosalind Goudie,&nbsp;Katie Hassell,&nbsp;Josie Evans,&nbsp;Panoraia Kalapotharakou,&nbsp;Utkarsh Agrawal,&nbsp;Beatrix Kele,&nbsp;Mark Hamilton,&nbsp;Catherine Moore,&nbsp;Rachel Byford,&nbsp;Julia Stowe,&nbsp;Chris Robertson,&nbsp;Anastasia Couzens,&nbsp;Gavin Jamie,&nbsp;Katja Hoschler,&nbsp;Kathleen Pheasant,&nbsp;Elizabeth Button,&nbsp;Catherine Quinot,&nbsp;Tim Jones,&nbsp;Sneha Anand,&nbsp;Conall Watson,&nbsp;Nick Andrews,&nbsp;Simon de Lusignan,&nbsp;Maria Zambon,&nbsp;Christopher Williams,&nbsp;Simon Cottrell,&nbsp;Kimberly Marsh,&nbsp;Jim McMenamin,&nbsp;Jamie Lopez Bernal","doi":"10.1111/irv.13284","DOIUrl":"10.1111/irv.13284","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>We report 2023/2024 season interim influenza vaccine effectiveness for three studies, namely, primary care in Great Britain, hospital settings in Scotland and hospital settings in England.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>A test negative design was used to estimate vaccine effectiveness.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Estimated vaccine effectiveness against all influenzas ranged from 63% (95% confidence interval 46 to 75%) to 65% (41 to 79%) among children aged 2–17, from 36% (20 to 49%) to 55% (43 to 65%) among adults 18–64 and from 40% (29 to 50%) to 55% (32 to 70%) among adults aged 65 and over.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>During a period of co-circulation of influenza A(H1N1)pdm09 and A(H3N2) in the United Kingdom, evidence for effectiveness of the influenza vaccine in both children and adults was found.</p>\u0000 </section>\u0000 </div>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 5","pages":""},"PeriodicalIF":4.4,"publicationDate":"2024-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/irv.13284","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141075953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Avian Influenza Virus (H5N1) Was Not Detected Among Dairy Cattle and Farm Workers in Pakistan 巴基斯坦奶牛和农场工人中未检测到禽流感病毒 (H5N1)
IF 4.4 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-05-17 DOI: 10.1111/irv.13317
Aftab Ahmed, Samia Saqlain, Arslan Rasool, Shaban Muhammad, Sajid Umar
<p>Influenza A virus (IAV) is a zoonotic pathogen that poses a significant challenge to avian and public health [<span>1</span>]. Migratory waterfowl, such as ducks and geese, are the main reservoir of IAVs and spread IAVs to other domestic birds and animals. Cross-species transmission of IAV is generally rare, but it can occur, particularly if there are mutations in the virus's genetic code that allow it to attach to receptors in a new host or if a reassortment event occurs when two different influenza viruses infect the same host simultaneously and exchange genetic material. The Avian Influenza A(H5N1) virus, commonly known as “bird flu,” remains primarily a virus that affects birds, but it has on occasion infected humans. A relatively low number of sporadic human infections with A(H5N1) has been reported over the years. A total of 26 sporadic human cases from January 2022 through April 2024 [<span>2</span>] from eight countries indicates ongoing transmission from birds to humans. These cases highlight the potential for this virus to cause severe illness and death in humans. On rare occasions, A(H5N1) has crossed over to some nonavian species especially when there has been close contact with infected birds [<span>3-5</span>]. Cattle, like other mammalian species, are generally susceptible to specific types of IAV and Influenza D virus. Typically, A(H5N1) is not a common infection in cattle. Surprisingly, numerous sporadic cases of A(H5N1) have been reported recently from dairy cattle in multiple states of the United States [<span>5, 6</span>]. The emerging bovine H5N1 virus is novel to the cattle industry. Unlike other mammals, H5N1 grows in the udder of the dairy cows and does not seem to cause respiratory disease in cattle. Bovine H5N1 virus has undergone a specific adaptation in an enzyme called polymerase allowing better replication inside cow udder. A dairy farm worker with conjunctivitis was also confirmed positive highlighting fresh concerns of bovine H5N1 virus to human health [<span>5, 6</span>]. The dairy worker might have encountered this virus during the milking process or through hand-to-eye contact. Further genetic changes within polymerase enzyme or other genome segments of bovine H5N1 virus could allow for faster adaptation and may even support cattle-to-cattle or cattle to human transmission [<span>5, 6</span>]. Together, these reports highlight that H5N1 has potential to evolve and become a serious threat to human health. There is no data bovine H5N1 virus from Pakistan. Therefore, this study was designed to monitor the prevalence of IAVs and potential spillover of novel H5N1 among cattle and farm workers in Punjab province of Pakistan. Human subject research was approved by Institutional Review Board (IRB) at Duke Kunshan University, China (2024SU040).</p><p>As part of the Influenza D virus surveillance study, we collected nasal washes (<i>n =</i> 117) and nasal swab samples (<i>n =</i> 376) from farm workers and dairy cattle
甲型流感病毒(IAV)是一种人畜共患病原体,对禽类和公共卫生构成重大挑战[1]。鸭和鹅等迁徙水禽是 IAV 的主要传播源,并将 IAV 传播给其他家禽和动物。IAV 的跨物种传播一般比较罕见,但也有可能发生,特别是当病毒的遗传密码发生突变,使其能够附着在新宿主的受体上,或者当两种不同的流感病毒同时感染同一宿主并交换遗传物质时,就会发生重配事件。俗称 "禽流感 "的甲型 H5N1 禽流感病毒主要影响鸟类,但有时也会感染人类。多年来,人类零星感染甲型 H5N1 病毒的报告数量相对较少。从 2022 年 1 月到 2024 年 4 月,8 个国家共发现 26 例人类零星感染病例[2],这表明病毒仍在从鸟类向人类传播。这些病例凸显了这种病毒可能导致人类重病和死亡。在极少数情况下,甲型 H5N1 病毒会传播到一些非鸟类物种,尤其是在与受感染鸟类有密切接触的情况下[3-5]。牛与其他哺乳动物一样,通常对特定类型的 IAV 和 D 型流感病毒易感。通常情况下,甲型 H5N1 流感病毒在牛中并不常见。令人惊讶的是,最近美国多个州报告了多起奶牛感染甲型 H5N1 病毒的零星病例 [5,6]。对于养牛业来说,新出现的牛 H5N1 病毒是一种新病毒。与其他哺乳动物不同,H5N1 生长在奶牛的乳房中,似乎不会引起牛的呼吸道疾病。牛 H5N1 病毒对一种称为聚合酶的酶进行了特殊调整,从而能够更好地在奶牛乳房内复制。一名患有结膜炎的奶牛场工人也被确诊为阳性,这凸显了牛 H5N1 病毒对人类健康的新担忧[5, 6]。该奶牛场工人可能在挤奶过程中或通过手眼接触感染了这种病毒。牛 H5N1 病毒聚合酶或其他基因组片段的进一步基因变化可能使病毒更快适应,甚至可能支持牛对牛或牛对人的传播 [5,6]。这些报告突出表明,H5N1 有可能进化并严重威胁人类健康。目前还没有来自巴基斯坦的牛 H5N1 病毒数据。因此,本研究旨在监测 IAV 的流行情况以及新型 H5N1 病毒在巴基斯坦旁遮普省的牛和农场工人中的潜在传播。人体研究已获得中国昆山杜克大学机构审查委员会(IRB)的批准(2024SU040)。作为 D 型流感病毒监测研究的一部分,我们于 2023 年 1 月至 2024 年 3 月期间在旁遮普省内不同城市(拉合尔、卡苏尔、萨希瓦尔、木尔坦、莱亚和巴哈瓦尔布尔)的六个商业奶牛场分别采集了农场工人和奶牛的鼻腔清洗液样本(n = 117)和鼻拭子样本(n = 376)(图 1)。按照之前的描述[7],我们每月两次前往这些农场采集鼻腔清洗液和鼻拭子样本。此外,我们还在 2024 年 4 月用无菌试管从不同牧场采集了挤奶过程中的牛奶样本(n = 243),以检测牛 H5N1 病毒。我们按照生产商的建议[1],使用商用 RNA 提取试剂盒(Cat#9766,Takara,中国大连)从样本中提取病毒 RNA。为了验证试剂和提取过程的完整性,我们加入了阳性和阴性对照。使用HiScript II一步式RT-PCR试剂盒(Vazyme公司,中国南京)通过一步式RT-PCR对提取的样本进行H5N1病毒筛查。使用针对血凝素(HA)基因的特异引物[8]。在每次 PCR 运行中加入阳性和阴性对照以确认结果。所有阳性对照均成功扩增,而阴性对照在 PCR 反应中未扩增。假设我们的样本代表了研究期间旁遮普省的牛和农场工人,那么 H5N1 似乎并未在旁遮普省的牛群中流行。这些发现也可能与这些农场严格的生物安全措施有关。将更多的养牛场纳入巴基斯坦其他省份的采样计划可能会扭转我们对 H5N1 流行情况的观察。尽管存在样本量小、地域范围小和研究持续时间长等局限性,但我们的研究仍然很有价值,因为它以新颖的方法提供了初步数据,可促进更大规模和更全面的研究。然而,畜牧场工人和兽医需要提高警惕,因为他们受感染的风险较高。
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Influenza and Other Respiratory Viruses
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