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Adjuvant-driven modulation of epitope recognition and protective immunity in Bm86 vaccinated Holstein-Friesian cattle. 佐剂驱动的Bm86疫苗对荷斯坦-弗里西亚牛表位识别和保护性免疫的调节。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.11.006
Laura Jane Bishop, Christian Stutzer, Jannie Crafford, Christine Maritz-Olivier

Livestock production is vital to the economies and food security of African countries. Rising global demand for livestock-derived products intensifies the challenge of managing ticks and tick-borne diseases. This study aimed to optimize a Bm86-based vaccine for controlling Rhipicephalus microplus. Commercial Bm86-based vaccines show variable efficacy (0-100 %), reflecting incomplete understanding of the antigen and the immune response elicited. To address this, homologous challenge was conducted in Holstein-Friesian calves with Bm86 formulated with Montanide™ ISA 71 VG (referred to as Montanide™) and a novel Alum-based adjuvant alternative in two separate vaccine trials. Antibody responses were determined utilising indirect ELISA. Vaccine efficacy was assessed through controlled R. microplus challenge. Immunoinformatics mapped the antigenic regions of Bm86, followed by ex vivo validation using antisera from vaccinated cattle. Both adjuvant formulations induced high levels of Bm86-specific total IgG antibodies. However, only the Montanide™ formulation induced a protective response of 88.2 %, which correlated with total IgG antibody levels (r = 0.86). In contrast, the Alum-based adjuvant formulation induced low efficacy (2.3 %) with a strong inverse correlation with total IgG antibodies (r = -0.95). Both formulations induced an IgG1-biased (i.e. T-helper 2) antibody response, but the Montanide™ formulation conferred a more balanced IgG1/IgG2 response. The efficacy induced by the Montanide™ formulation strongly correlated with the levels of IgG2 antibodies (r = 0.91), suggesting that a balanced Th1/Th2 response plays a key role in protection. Despite its efficacy, the Montanide™ formulation caused adverse injection site effects, highlighting the need for safer alternatives. Epitope mapping identified similar linear B-cell epitope regions recognised by total IgG antibodies induced by vaccination with both adjuvant formulations. These findings suggest that Bm86 vaccination activates broader immune pathways than previously understood, emphasizing the need for exploration of additional immune markers to improve vaccine performance.

畜牧生产对非洲国家的经济和粮食安全至关重要。全球对畜产品需求的不断增长加剧了管理蜱虫和蜱媒疾病的挑战。本研究旨在优化一种以bm86为基础的微头虫疫苗。基于bm86的商业化疫苗显示出不同的效力(0-100%),反映出对抗原和引发的免疫反应的了解不完全。为了解决这一问题,在两项单独的疫苗试验中,用由Montanide™ISA 71 VG(简称Montanide™)和一种新型铝基佐剂替代品配制的Bm86在荷斯坦-弗里马犊牛中进行了同源挑战。采用间接ELISA法测定抗体反应。通过对照微弧菌攻毒,评价疫苗的效力。免疫信息学绘制了Bm86的抗原区域,随后使用接种牛的抗血清进行了体外验证。两种佐剂配方均诱导高水平的bm86特异性总IgG抗体。然而,只有Montanide™制剂诱导了88.2%的保护反应,这与总IgG抗体水平相关(r= 0.86)。相比之下,铝基佐剂配方的疗效较低(2.3%),与总IgG抗体呈强负相关(r= -0.95)。两种制剂均诱导IgG1偏倚(即T-helper 2)抗体应答,但Montanide™制剂具有更平衡的IgG1/IgG2应答。Montanide™制剂诱导的疗效与IgG2抗体水平密切相关(r= 0.91),表明平衡的Th1/Th2应答在保护中起关键作用。尽管疗效显著,但Montanide™制剂引起了注射部位的不良反应,因此需要更安全的替代品。表位定位鉴定出由接种两种佐剂配方诱导的总IgG抗体识别的相似线性b细胞表位区域。这些发现表明,Bm86疫苗激活的免疫途径比以前所了解的更广泛,强调需要探索额外的免疫标记物来提高疫苗的性能。
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引用次数: 0
CRISPR/Cas genome editing, functional genomics, and diagnostics for parasitic helminths CRISPR/Cas基因组编辑、功能基因组学和寄生虫诊断。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.05.001
Akito Koike, Paul J. Brindley
Functional genomics using CRISPR (Clustered Regulatory Interspaced Short Palindromic Repeats)/Cas (CRISPR-associated endonuclease)-based approaches has revolutionized biomedical sciences. Gene editing is also widespread in parasitology generally and its use is increasing in studies on helminths including flatworm and roundworm parasites. Here, we survey the progress, specifically with experimental CRISPR-facilitated functional genomics to investigate helminth biology and pathogenesis, and also with the burgeoning use of CRISPR-based methods to assist in diagnosis of helminth infections. We also provide an historical timeline of the introduction and uses of CRISPR in helminth species to date.
基于CRISPR (Clustered Regulatory Interspaced Short Palindromic Repeats)/Cas (CRISPR相关核酸内切酶)的功能基因组学方法已经彻底改变了生物医学科学。基因编辑在寄生虫学中也很普遍,它在包括扁形虫和蛔虫寄生虫在内的蠕虫研究中的应用正在增加。在这里,我们综述了这方面的进展,特别是利用实验性crispr促进的功能基因组学来研究蠕虫的生物学和发病机制,以及新兴的基于crispr的方法来协助诊断蠕虫感染。我们还提供了迄今为止在蠕虫物种中引入和使用CRISPR的历史时间表。
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引用次数: 0
One of us survived: persistence of a syringophilid mite after Passenger Pigeon extinction 我们中的一个幸存了下来:旅鸽灭绝后嗜丁香螨的持续存在。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.07.005
Maciej Skoracki , Markus Unsoeld , Milena Patan , Bozena Sikora
The current global biodiversity loss crisis affects not only avifauna but also associated parasites. Studies on museum specimens of extinct birds provide valuable insights into the species diversity, ecology, and evolution of parasitofauna, as well as determining whether specific parasite species have survived or become extinct alongside their hosts. In this study, we present the results of the examination of museum dry skins of the Passenger Pigeon Ectopistes migratorius (Linnaeus) (Columbiformes: Columbidae), which had been extremely common in North America until its extinction at the beginning of the 20th century. Studies revealed the presence of the representative of the family Syringophilidae, Meitingsunes zenadourae Clark (Prostigmata: Cheyletoidea), within the quill feathers of this host. This quill mite is a well-known parasite of multiple pigeon species across different genera of the order Columbiformes. The stenoxenic nature of M. zenadourae has likely contributed to its survival despite the extinction of E. migratorius.
当前的全球生物多样性丧失危机不仅影响到鸟类,也影响到相关的寄生虫。对博物馆中已灭绝鸟类标本的研究为了解寄生动物的物种多样性、生态学和进化提供了有价值的见解,并确定了特定的寄生虫物种是与宿主一起存活还是灭绝。在本研究中,我们介绍了对旅鸽Ectopistes migratorius (Linnaeus) (Columbiformes: Columbidae)干皮的检查结果,这种旅鸽在20世纪初灭绝之前在北美非常常见。研究表明,在这种寄主的羽毛中存在着丁香科的代表,Meitingsunes zenadourae Clark(原柱头目:丁香总科)。这种羽螨是一种众所周知的寄生虫,存在于不同属的多种鸽子身上。尽管E. migratorius灭绝了,但M. zenadourae的狭窄性可能有助于它的生存。
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引用次数: 0
Indigenous Plasmodium vivax upsurge in the Eastern Mediterranean, Western Pacific, and South East Asia regions – beyond the constant culpability of climate change, COVID-19, and armed conflicts 东地中海、西太平洋和东南亚地区本土间日疟原虫激增——超越气候变化、COVID-19和武装冲突的持续罪责。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.08.009
Loick P. Kojom Foko , Amit Sharma
Controlling Plasmodium vivax presents greater challenges compared to Plasmodium falciparum. Here, we analyzed epidemiological data on indigenous P. vivax cases from the Eastern Mediterranean, Southeast Asia, and Western Pacific regions in recent years. Significant upsurges are observed in more than half of the countries within these regions. In Papua New Guinea and Yemen, the increase has been consistent since 2015, while others, including Indonesia and Pakistan, have experienced sharp rises between 2020 and 2023 (e.g., +100 % and +83.4 %). Notably, in countries like Thailand, initially targeted by the WHO E-2025 elimination initiative, achieving elimination by 2025 appears unlikely. Factors like the COVID-19 pandemic, armed conflicts, and, more recently, climate change, do not fully resolve the reasons for resurgence in countries like Papua New Guinea, where additional issues such as chloroquine resistance must also be addressed. A compartmentalized approach is essential to tackle the P. vivax resurgence and achieve meaningful progress effectively.
与恶性疟原虫相比,间日疟原虫的控制面临更大的挑战。在这里,我们分析了近年来东地中海、东南亚和西太平洋地区本土间日疟原虫病例的流行病学数据。这些区域内半数以上的国家都出现了明显的上升。在巴布亚新几内亚和也门,自2015年以来增长一直保持稳定,而包括印度尼西亚和巴基斯坦在内的其他国家在2020年至2023年期间经历了大幅增长(例如+100%和+83.4%)。值得注意的是,在泰国等世卫组织E-2025消除行动最初针对的国家,到2025年实现消除似乎不太可能。COVID-19大流行、武装冲突以及最近的气候变化等因素并不能完全解决印度尼西亚等国疫情死灰复燃的原因,在这些国家,还必须解决氯喹耐药性等其他问题。我们建议采取分门别类的方法,以有效应对间日疟原虫的死灰复燃并取得有意义的进展。
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引用次数: 0
A study of the epidemiology of Anoplocephala perfoliata infection in horses and the oribatid mite vector in southern England 英格兰南部马中马头虫感染及甲螨病媒的流行病学研究。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.09.003
Hannah Wickenden , Kirsty L. Lightbody , Natalia Peczak , Kim B. Stevens , Danica Pollard , Damer P. Blake , Corrine J. Austin , Jacqueline B. Matthews , Mark T. Fox
Anoplocephala perfoliata is the most common equine tapeworm infection. This parasite is found at the small/large intestinal junction and has been associated with colic. The cestode has an indirect lifecycle involving oribatid mite intermediate hosts, though little is known of its epidemiology. This study aimed to monitor seasonal fluctuations in pasture oribatid mite numbers and the presence of Anoplocephala spp. DNA in mite samples collected from three equine premises in the UK. Exposure to infection in resident horses was assessed by measuring tapeworm-specific salivary antibodies. The data were analysed with management information to identify factors associated with the occurrence of (i) pasture samples containing different oribatid families, (ii) mite samples containing Anoplocephala spp. DNA, and (iii) a borderline or moderate high saliva score in the ELISA. Each yard was visited every four weeks (June 2016-August 2017) when three pastures were vacuum-sampled for mites. Three, one metre-square tetrads and grass surrounding 10 faecal pats were sampled per pasture. Mites collected were counted, identified to family level and pooled by family for Anoplocephala spp. DNA screening by polymerase chain reaction (PCR). Saliva samples were screened for A. perfoliata antibodies using the EquiSal® Tapeworm test in 10–23 horses at each yard every 2–3 weeks. Mixed-effects regression models were used to identify risk factors for each of the three outcomes. The results indicated that oribatid mite families not identified previously could act as intermediate hosts for Anoplocephala spp., and established that whilst oribatid mites might be found on pasture year-round, Damaeolidae and Oribatidae were 81 % (p = 0.005) and 64 % (p = 0.004) less likely to be detected in winter than in summer. Tapeworm-infected mites were more likely to be detected from March to September when more mites were recovered from paddocks, whilst saliva antibody test-positive horses were least likely to occur in autumn. Horses that grazed for half a day compared to those that grazed for full days were less likely to be positive in the saliva test. The findings yielded new insights into the epidemiology of equine tapeworm and its intermediate host in the UK, and contribute valuable information to support evidence-based control programmes for this parasite.
马头绦虫是最常见的马绦虫感染。这种寄生虫在小肠/大肠交界处发现,并与绞痛有关。该寄生虫有一个间接的生命周期,涉及甲螨中间宿主,尽管对其流行病学知之甚少。本研究旨在监测牧场甲螨数量的季节性波动和在英国三个马场采集的螨样本中存在的牛头蝇类DNA。通过测量绦虫特异性唾液抗体来评估驻地马暴露于感染。将数据与管理信息进行分析,以确定(i)牧场样本中含有不同的甲虫科,(ii)螨样本中含有牛头蝇的DNA,以及(iii) ELISA唾液评分处于边缘或中高水平的因素。每四周(2016年6月至2017年8月)对每个院子进行一次访问,并对三个牧场进行真空取样以检测螨虫。每个牧场取样3个,1平方米的四分体和周围10个粪便块的草。对采集到的螨进行计数,按科级鉴定,按科合并,采用聚合酶链反应(PCR)进行DNA筛选。采用EquiSal®绦虫试验对10-23匹马的唾液样本进行perfoliata抗体筛选,每2-3周进行一次。使用混合效应回归模型来确定三个结果的危险因素。结果表明,未鉴定的甲螨科可作为牛头蝇的中间寄主;牧场全年均可发现甲螨,但冬季发现达螨科和甲螨科的比例分别为81% (p=0.005)和64% (p=0.004)。绦虫感染的螨在3月至9月更容易被检测到,此时从围场中回收的螨较多,而唾液抗体测试阳性的马在秋季最不可能出现。与那些吃了一整天草的马相比,吃了半天草的马在唾液测试中呈阳性的可能性更小。这些发现为英国马绦虫及其中间宿主的流行病学提供了新的见解,并为支持这种寄生虫的循证控制规划提供了有价值的信息。
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引用次数: 0
Testing the host specificity hypothesis: delimitation of Gyrodactylus species infecting fishes of the family Profundulidae across their distribution range 检验宿主特异性假说:在分布范围内感染深孔鱼科鱼类的旋毛虫物种的划分。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.08.001
Miguel Calixto-Rojas , Miguel Rubio-Godoy , Ismael Guzmán-Valdivieso , Juan J. Barrios-Gutiérrez , Carlos D. Pinacho-Pinacho
Host specificity, a trait describing how many different hosts a parasite can infect, ranges from strict specialists for parasites associated to a single host species, to generalists for those able to infect several host species, which may even be phylogenetically unrelated. Monogenea are generally considered to be specialist parasites, but this appreciation may be an artifact arising from biased or limited sampling. Here, we evaluate host specificity of species of Gyrodactylus infecting fishes of the family Profundulidae collected in southern Mexico and, crucially, encompassing the whole distribution range of seven profundulid species. We used several molecular species delimitation methods to identify parasite lineages, which consistently recovered six species, four previously known and two new species, which we describe here. Gyrodactylid species infected from one to seven profundulid fish species, spanning the whole range of recognized host specificity associations, from strict specialists to generalists. No clear pattern could be discerned in the host-parasite associations we analysed (phylogenetic, host, geographical), suggesting that the ecological and evolutionary history of Gyrodactylus transcends that of their hosts – and one can envisage that with progressively more in-depth studies, it will be increasingly more difficult to speak of “general” patterns within large and complex groups of parasites, like the genus Gyrodactylus (Monogenea).
宿主特异性是一种描述寄生虫可以感染多少不同宿主的特征,其范围从与单一宿主物种相关的寄生虫的严格专家到能够感染几种宿主物种的通才,这些宿主物种甚至可能在系统发育上无关。单系通常被认为是专门的寄生虫,但这种评价可能是由于有偏见或有限的抽样而产生的假象。在这里,我们评估了Gyrodactylus感染在墨西哥南部收集的prounduldae科鱼类的物种的宿主特异性,并且至关重要的是,涵盖了7种prounduldae物种的整个分布范围。我们使用了几种分子物种划分方法来鉴定寄生虫谱系,一致地恢复了6种,4种以前已知的和2种新的,我们在这里描述。从一种到七种深海鱼类,从严格的专家到通才,跨越了宿主特异性关联的整个范围。在我们分析的宿主-寄生虫关联(系统发育,宿主,地理)中没有明确的模式,这表明Gyrodactylus的生态和进化历史超越了它们的宿主-人们可以设想,随着研究的逐步深入,在大型和复杂的寄生虫群体中谈论“一般”模式将越来越困难,比如Gyrodactylus属(单属)。
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引用次数: 0
Genetically tractable rodent models for Cryptosporidium hominis and C. parvum infections: identifying differences in infection sites between host species 人隐孢子虫和小隐孢子虫感染的遗传易感啮齿动物模型:识别宿主物种之间感染部位的差异。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.08.003
Lianbei Sun , Wei He , Zuwei Yang , Yilin Wu , Jing Wang , Na Li , Yaqiong Guo , Rui Xu , Jiayu Li , Yaoyu Feng , Lihua Xiao
Cryptosporidiosis causes severe diarrhea in children and livestock. However, the absence of suitable rodent models has led to a lack of effective drugs and vaccines. In this study, genetically tractable rat and mouse models were developed for the two main causes of human cryptosporidiosis: Cryptosporidium hominis and C. parvum. Neonatal mice and rats were successfully infected with two nonhuman primate-adapted C. hominis isolates and one C. parvum IId isolate, resulting in high oocyst shedding. Using isolates tagged with fluorescent proteins and luciferases enabled the easy detection and quantification of oocyst shedding. Both Cryptosporidium species primarily infected the ileum, cecum, and colon of neonatal mice. In contrast, the parasites primarily colonized the duodenum and jejunum of neonatal rats. Both species responded to treatment with a lysyl-tRNA synthetase inhibitor in the rat model. Developing tractable animal models with different infection sites will allow for comparative studies of the biology and immunity of major human-pathogenic Cryptosporidium species, as well as the evaluation of potential drugs and vaccines.
隐孢子虫病导致儿童和牲畜严重腹泻。然而,由于缺乏合适的啮齿动物模型,导致缺乏有效的药物和疫苗。在这项研究中,遗传易感的大鼠和小鼠模型建立了人类隐孢子虫病的两个主要原因:人隐孢子虫和小隐孢子虫。新生小鼠和大鼠成功感染了两株非人灵长类适应的人猿C.菌株和一株小C.菌株,导致卵囊大量脱落。使用荧光蛋白和荧光素酶标记的分离物可以方便地检测和定量卵囊脱落。这两种隐孢子虫主要感染新生小鼠的回肠、盲肠和结肠。相比之下,寄生虫主要定植于新生大鼠的十二指肠和空肠。在大鼠模型中,这两个物种都对赖氨酸- trna合成酶抑制剂治疗有反应。开发具有不同感染部位的易处理的动物模型将允许对主要人类致病性隐孢子虫物种的生物学和免疫力进行比较研究,以及评估潜在的药物和疫苗。
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引用次数: 0
When can multiple parasites with complex life cycles coexist under conflicts of host manipulation? 在宿主操纵的冲突下,具有复杂生命周期的多种寄生虫何时可以共存?
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ijpara.2025.08.012
Chih-Wei Wang , Hsuan-Wien Chen , Takuya Sato , Takefumi Nakazawa
Parasites are diverse and play crucial roles in ecosystems, yet mechanisms underlying their diversity remain poorly understood. Many parasites have complex life cycles, manipulating their hosts to facilitate transition through inter-host trophic interactions. When multiple parasites share a common intermediate host but transition to different definitive hosts, they face two conflicts in host manipulation strategies. First, host manipulation may increase predation by non-host predators, leading to “dead-ends.” Second, interactions among parasites may complicate host manipulation in a co-infected intermediate host. To explore how host-manipulating parasites compete and coexist under these conflicts, we developed a mathematical model describing population dynamics of two parasites, one intermediate host (prey), and two definitive hosts (predators). The competitive exclusion principle predicts that the two definitive hosts (and thus their parasites) cannot coexist due to competition for the intermediate host. However, our results show that host-manipulating parasites can alter this outcome. We identified three conditions that promote parasite coexistence: (i) the parasite infecting the competitively inferior predator is more prone to dead-ends as a result of adopting a target-generic host manipulation strategy, (ii) co-infected intermediate hosts are manipulated so that predation by the competitively superior predator decreases, whereas predation by the competitively inferior predator increases, and (iii) host–parasite community dynamics exhibit limited fluctuations. Future studies are encouraged to evaluate the likelihood that these conditions are met. Furthermore, we found that alternative states can emerge across a broad parameter space, suggesting potential regime shifts in their community composition. These findings provide novel insights into the mechanisms underlying parasite diversity and its fragility, laying the groundwork for future research on more complex scenarios.
寄生虫种类繁多,在生态系统中发挥着至关重要的作用,但人们对其多样性背后的机制知之甚少。许多寄生虫具有复杂的生命周期,通过宿主间的营养相互作用操纵宿主以促进过渡。当多种寄生虫共享一个共同的中间宿主,但过渡到不同的最终宿主时,它们在宿主操作策略上面临两种冲突。首先,宿主操纵可能会增加非宿主捕食者的捕食,导致“死胡同”。其次,寄生虫之间的相互作用可能使共感染中间宿主的宿主操作复杂化。为了探索在这些冲突中操纵宿主的寄生虫是如何竞争和共存的,我们建立了一个描述两种寄生虫,一个中间宿主(猎物)和两个最终宿主(捕食者)的种群动态的数学模型。竞争排斥原理预测,由于对中间宿主的竞争,两个最终宿主(以及它们的寄生虫)不能共存。然而,我们的研究结果表明,操纵宿主的寄生虫可以改变这一结果。我们确定了促进寄生虫共存的三个条件:(i)由于采用目标通用宿主操纵策略,感染竞争性劣势捕食者的寄生虫更容易陷入死胡同;(ii)共同感染的中间宿主被操纵,从而竞争性优势捕食者的捕食减少,而竞争性劣势捕食者的捕食增加;(iii)宿主-寄生虫群落动态表现出有限的波动。鼓励未来的研究评估满足这些条件的可能性。此外,我们发现替代状态可以在广泛的参数空间中出现,这表明它们的群落组成可能发生变化。这些发现为寄生虫多样性及其脆弱性的机制提供了新的见解,为未来更复杂情况的研究奠定了基础。
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引用次数: 0
Systematics and phylogeny of Chalcinotrematinae (Digenea: Haploporidae): Erection of a new genus and description of two new species from South America through integrated analyses. Chalcinotrematinae的系统学和系统发育(di亚纲:单孔虫科):一新属的建立和两新种的综合分析。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-11-28 DOI: 10.1016/j.ijpara.2025.11.005
Camila Pantoja, Olena Kudlai, Maarten P M Vanhove, Rodney A Bray, José L Luque, Nikol Kmentová, Tomáš Scholz

The subfamily Chalcinotrematinae (Haploporidae) comprises an understudied group of digenean parasites infecting freshwater and brackish water fishes across the Americas, Africa, and Asia. Its systematics has rarely been investigated using molecular data, with DNA sequences available for only a few species representing two of the six recognised genera. We collected chalcinotrematine trematodes from freshwater fishes in the Jari River, Amazon Basin, Brazil, and in Misiones, Argentina. Specimens from Brazil were characterised through an integrative approach combining morphological examination with molecular data (partial 28S and ITS2 rDNA sequences), whereas those from Argentina were analysed morphologically. As a result, we describe two new species from Brazil: Chalcinotrema arleneae sp. nov. from Leporinus friderici and Laemolyta proxima, and Unicoelium gerardoi sp. nov. from Hypostomus plecostomus. This study provides the first molecular data for both Chalcinotrema and Unicoelium, expanding the phylogenetic framework of Chalcinotrematinae. Paralecithobotrys brasiliensis is recorded from Argentina in Megaleporinus obtusidens, extending its geographical range. We reassessed the generic limits of Saccocoelioides, the most species-rich genus within the subfamily. Based on combined morphological, molecular, host, and distributional evidence, we propose taxonomic revisions, establishing Neosaccocoelioides gen. nov. for several South American species formerly assigned to Saccocoelioides: N. antonioi comb. nov., N. bacilliformis comb. nov., N. elongatus comb. nov., N. magnus comb. nov., N. miguelmontesi comb. nov. (type species), and N. szidati comb. nov. Additionally, N. platense comb. nov., previously placed in Chalcinotrema, is transferred to the new genus. Saccocoelioides chilkaensis and S. lizae are considered species inquirendae; and S. guaporense is considered incertae sedis. These findings refine chalcinotrematine relationships and highlight the need for expanded molecular datasets to resolve systematic and biogeographical uncertainties.

Chalcinotrematinae亚科(Haploporidae)是一种未经充分研究的感染美洲、非洲和亚洲淡水和咸淡水鱼类的digenean寄生虫。它的系统学很少使用分子数据进行研究,只有代表六个公认属中的两个的少数物种的DNA序列。我们从巴西亚马逊河流域的Jari河和阿根廷米西奥内斯的淡水鱼中采集了查尔辛虫碱吸虫。来自巴西的标本通过结合形态学检查和分子数据(部分28S和ITS2 rDNA序列)的综合方法进行表征,而来自阿根廷的标本则进行形态学分析。结果发现了两个新种:来自friderici Leporinus和Laemolyta proxima的Chalcinotrema arleneae sp. 11和来自Hypostomus plecostomus的gerardoi sp. 11。本研究首次提供了Chalcinotrema和Unicoelium的分子数据,扩展了chalcinotrematae的系统发育框架。在阿根廷的Megaleporinus obtusidens中发现了brasiliensis,扩大了其地理范围。我们重新评估了该亚科中物种最丰富的属Saccocoelioides的属界。基于形态、分子、寄主和分布的综合证据,我们提出了分类修正,将几个原归属于Saccocoelioides: N. antonioi comb的南美物种建立为Neosaccocoelioides gen. 11。11月,芽孢杆菌梳。11月,N.长形梳。11月,n.m magnus梳子。11月,n.m iguelmontesi梳子。11 .(模式种),和N. szidati梳子。11 .此外,N. platense梳子。十一月,以前放置在Chalcinotrema,被转移到新的属。Saccocoelioides chilkaensis和s.l izae被认为是询问科的种;而瓜梨花则被认为是不可靠的。这些发现完善了Chalcinotrematinae的关系,并强调了扩大分子数据集以解决系统和生物地理不确定性的必要性。
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引用次数: 0
Ten simple rules for implementing deep amplicon sequencing in parasitology. 在寄生虫学中实施深度扩增子测序的十个简单规则。
IF 3.2 2区 医学 Q1 PARASITOLOGY Pub Date : 2025-11-21 DOI: 10.1016/j.ijpara.2025.11.003
Jan Šlapeta, Jürgen Krücken, Alicia Rojas, Alex Chambers, Lynsey A Melville, María Martínez-Valladares, Candela Canton, Emily K Francis, Osama Zahid, Ana Cláudia A Albuquerque, Dave J Bartley, Cesar C Bassetto, Orla Byrne, Vito Colella, Livio M Costa-Junior, Stephen R Doyle, Mike Evans, Abdul Ghafar, Pablo Godoy, Naoki Hayashi, Mohamed A Helal, Lucas G Huggins, Abdul Jabbar, Rhys A Jones, Benedict E Karani, Juan Pedro Liron, Laura Maté, Amanda McEvoy, Khalid M Mohammedsalih, Grace Mulcahy, Martin K Nielsen, Barbora Pafčo, Laura E Peachey, Joby Robleto-Quesada, Georg von Samson-Himmelstjerna, Lucas C de Sousa-Paula, John S Gilleard

Deep amplicon sequencing is transforming parasitology by enabling high-throughput profiling of parasite communities and detection of resistance-associated genetic variants. Despite its growing adoption, many researchers face challenges in implementation, and its full potential is often hindered by challenges in experimental design, including marker selection, data analysis and reproducibility. This article presents ten simple rules for applying deep amplicon sequencing in parasitology, developed through expert consensus at a deep amplicon sequencing symposium during the 2025 World Association for the Advancement of Veterinary Parasitology conference. These rules cover essential aspects from formulating research questions and choosing appropriate markers to managing data workflows and contributing to reference databases. We highlight the importance of integrating deep amplicon sequencing with traditional parasitological methods, ensuring transparent reporting and investing in capacity building. Whether you are new to deep amplicon sequencing or seeking to improve your current practices, these guidelines offer practical advice to enhance the robustness, reproducibility, and impact of your research. By adopting these principles, parasitologists can contribute to, and advance, a more reliable and collaborative scientific landscape.

深度扩增子测序通过实现寄生虫群落的高通量分析和检测耐药性相关的遗传变异,正在改变寄生虫学。尽管越来越多的人采用它,但许多研究人员在实施过程中面临挑战,而且它的全部潜力往往受到实验设计方面的挑战的阻碍,包括标记选择、数据分析和可重复性。本文介绍了在寄生虫学中应用深度扩增子测序的十个简单规则,这些规则是在2025年世界兽医寄生虫学促进协会会议期间的深度扩增子测序研讨会上通过专家共识制定的。这些规则涵盖了从制定研究问题和选择适当的标记到管理数据工作流程和提供参考数据库的基本方面。我们强调将深度扩增子测序与传统寄生虫学方法相结合的重要性,确保报告透明,并投资于能力建设。无论您是深度扩增子测序的新手还是寻求改进您当前的实践,这些指南都提供了实用的建议,以增强您的研究的稳健性,可重复性和影响。通过采用这些原则,寄生虫学家可以为更可靠和合作的科学景观做出贡献并推动其发展。
{"title":"Ten simple rules for implementing deep amplicon sequencing in parasitology.","authors":"Jan Šlapeta, Jürgen Krücken, Alicia Rojas, Alex Chambers, Lynsey A Melville, María Martínez-Valladares, Candela Canton, Emily K Francis, Osama Zahid, Ana Cláudia A Albuquerque, Dave J Bartley, Cesar C Bassetto, Orla Byrne, Vito Colella, Livio M Costa-Junior, Stephen R Doyle, Mike Evans, Abdul Ghafar, Pablo Godoy, Naoki Hayashi, Mohamed A Helal, Lucas G Huggins, Abdul Jabbar, Rhys A Jones, Benedict E Karani, Juan Pedro Liron, Laura Maté, Amanda McEvoy, Khalid M Mohammedsalih, Grace Mulcahy, Martin K Nielsen, Barbora Pafčo, Laura E Peachey, Joby Robleto-Quesada, Georg von Samson-Himmelstjerna, Lucas C de Sousa-Paula, John S Gilleard","doi":"10.1016/j.ijpara.2025.11.003","DOIUrl":"10.1016/j.ijpara.2025.11.003","url":null,"abstract":"<p><p>Deep amplicon sequencing is transforming parasitology by enabling high-throughput profiling of parasite communities and detection of resistance-associated genetic variants. Despite its growing adoption, many researchers face challenges in implementation, and its full potential is often hindered by challenges in experimental design, including marker selection, data analysis and reproducibility. This article presents ten simple rules for applying deep amplicon sequencing in parasitology, developed through expert consensus at a deep amplicon sequencing symposium during the 2025 World Association for the Advancement of Veterinary Parasitology conference. These rules cover essential aspects from formulating research questions and choosing appropriate markers to managing data workflows and contributing to reference databases. We highlight the importance of integrating deep amplicon sequencing with traditional parasitological methods, ensuring transparent reporting and investing in capacity building. Whether you are new to deep amplicon sequencing or seeking to improve your current practices, these guidelines offer practical advice to enhance the robustness, reproducibility, and impact of your research. By adopting these principles, parasitologists can contribute to, and advance, a more reliable and collaborative scientific landscape.</p>","PeriodicalId":13725,"journal":{"name":"International journal for parasitology","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2025-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145586917","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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International journal for parasitology
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