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Interactions between the gut bacterial community of Exopalaemon carinicauda and infection by Enterocytozoon hepatopenaei Exopalaemon carinicauda肠道细菌群落与肝肠孢子虫感染之间的相互作用。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-06 DOI: 10.1016/j.jip.2024.108115
Wanying Li , Songsong Hua , Zhengwei Du , Haiyi Jiang , Shanshan Jiang , Miaomiao Yu , Wazir Ali Baloch , Sumera Noonari , Binlun Yan , Huan Gao

To explore the relationship between the intestinal flora of Exopalaemon Carinicauda and infection by Enterocytozoo Hepatopenaei (EHP), we analyzed the species and richness of gut microbiota in infected individuals in different EHP load groups [i.e., control (C), high load (H), and low load (L)] using gene sequencing after infection. The results showed that the abundance of intestinal flora in the high-load EHP group was significantly lower than that in the healthy group. Based on the UPGMA cluster tree and PCoA analysis, with comparisons to healthy shrimp, the gut microbiota of the EHP high load and low load groups were clustered into one branch, which indicated that EHP infection changed the composition of the gut microbiota of infected shrimps. The heat map analysis of species abundance clustering revealed that the dominant bacteria in the low EHP load group and the control group were beneficial genera such as Lactococcus, Ligilactobacillius, and Bifidobacterium, but the dominant bacteria in the high EHP load group were harmful genera such as Pseudomonas, Photobacterium, and Candidatus hepatincola. The functions of the intestinal flora predicted that most genes related to metabolism were more abundant in healthy shrimp, most genes related to metabolism and the organisms’ system were more abundant in the low EHP load group, and most genes related to diseases and environmental information processing were more abundant in the high EHP load group. After separation and purification, the dominant bacteria (Bifidobacterium animalis in healthy shrimp and Lactococcus garvieae in the low EHP load group) and the non-dominant bacteria (Macrococus caseolyticus in the low EHP load group) were obtained. Each of these isolated strains were used together with EHP to infect E. carinicauda, and the results showed that Bifidobacterium animali and Lactococcus garvieae significantly reduced the EHP load in EHP-infected individuals. At the same time, the morphology and structure of the hepatopancreas and intestinal tissue of EHP-infected E. carinicauda were improved. No improvement was seen in tissue that was infected with Macrococus caseolyticus.

为了探讨卡氏栉水母(Exopalaemon Carinicauda)肠道菌群与Enterocytozoo Hepatopenaei(EHP)感染之间的关系,我们在感染后利用基因测序分析了不同EHP负荷组[即对照组(C)、高负荷组(H)和低负荷组(L)]受感染个体肠道微生物群的种类和丰富度。结果显示,高负荷 EHP 组的肠道菌群丰度明显低于健康组。根据 UPGMA 聚类树和 PCoA 分析,与健康虾比较,EHP 高负载组和低负载组的肠道微生物群聚成一个分支,这表明 EHP 感染改变了感染虾的肠道微生物群组成。物种丰度聚类热图分析表明,EHP低负荷组和对照组的优势菌为乳球菌、ligilactobacillius和双歧杆菌等有益菌属,而EHP高负荷组的优势菌为假单胞菌、光杆菌和 hepatincola念珠菌等有害菌属。根据肠道菌群的功能预测,健康虾体内与新陈代谢有关的基因较多,低 EHP 负荷组中与新陈代谢和机体系统有关的基因较多,高 EHP 负荷组中与疾病和环境信息处理有关的基因较多。经过分离和纯化,得到了优势菌(健康虾中的动物双歧杆菌和低 EHP 负荷组中的 Lactococcus garvieae)和非优势菌(低 EHP 负荷组中的 Macrococus caseolyticus)。结果表明,动物双歧杆菌(Bifidobacterium animali)和加维乳酸球菌(Lactococcus garvieae)能显著降低 EHP 感染者的 EHP 负荷。同时,感染 EHP 的鲤鱼肝胰腺和肠道组织的形态和结构也得到了改善。而感染 Macrococus caseolyticus 的组织则没有得到改善。
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引用次数: 0
Parasite and virus dynamics in the honeybee Apis mellifera unicolor on a tropical island recently invaded by Varroa destructor 最近受到破坏性瓦罗虫入侵的热带岛屿上单色蜜蜂的寄生虫和病毒动态。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-04 DOI: 10.1016/j.jip.2024.108125
Benoit Jobart , Hélène Delatte , Gérard Lebreton , Nicolas Cazanove , Olivier Esnault , Johanna Clémencet , Nicolas Blot

In La Réunion, the established honeybee subspecies Apis mellifera unicolor, an endemic subspecies of African lineage, is facing considerable challenges. Since the introduction of the Varroa destructor mite in 2017 high colony losses have been recorded. We investigated the dynamics of V. destructor and two viruses, the Deformed Wing Virus (DWV), known to be transmitted by the mite, and the Chronic Bee Paralysis Virus (CBPV), in A. m. unicolor. Colonies from two apiaries located at 300 and 900 m a.s.l were monitored twice for one year without any acaricide treatment. The brood area, V. destructor infestation rates, DWV and CBPV prevalence and load were recorded monthly. A. m. unicolor maintained brood rearing throughout the year. Varroa destructor infestation resulted in high colony mortality (up to 85 %) and high phoretic mite rates (up to 52 mites per hundred bees). The establishment of DWV in colonies occurred after that of V. destructor and the mite infestation rate had a significant effect on the virus prevalence and load. CBPV appeared only transiently throughout the surveys. The data showed that, in tropical colonies with permanent brood rearing, V. destructor and DWV can reach high levels, but are still subject to seasonal variations that appear to be influenced by environmental conditions. This suggests that beekeeping practices could be adapted by favouring sites and periods for transhumance or acaricide treatment.

在留尼旺岛,非洲特有的蜜蜂亚种单色蜂(Apis mellifera unicolor)正面临着巨大的挑战。自2017年引入破坏性瓦氏螨以来,蜂群损失惨重。我们调查了破坏螨和两种病毒(已知由螨传播的畸形翅病毒(DWV)和慢性蜜蜂麻痹病毒(CBPV))在A. m. unicolor中的动态。在未进行任何杀螨剂处理的情况下,对位于海拔 300 米和 900 米处的两个养蜂场的蜂群进行了为期一年的两次监测。每月记录育雏面积、破坏者病毒侵染率、DWV 和 CBPV 的流行率和负荷量。A. m. unicolor全年都在育雏。破坏者Varroa虫害导致蜂群死亡率高(高达85%),噬螨率高(高达每百只蜜蜂52只螨虫)。DWV在蜂群中的建立发生在破坏者之后,螨虫侵染率对病毒流行率和载量有显著影响。在整个调查过程中,CBPV 只是短暂出现。数据显示,在长期育雏的热带蜂群中,毁伤螨和 DWV 可达到很高的水平,但仍受季节性变化的影响,这似乎受环境条件的影响。这表明,可以通过选择转群地点和转群时期或进行杀螨剂处理来调整养蜂方法。
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引用次数: 0
Pathogens of the oak processionary moth Thaumetopoea processionea: Developing a user-friendly bioassay system and metagenome analyses for microorganisms 橡树游蛾 Thaumetopoea processionea 的病原体:开发用户友好型生物测定系统和微生物元基因组分析。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-04 DOI: 10.1016/j.jip.2024.108121
Lea Schäfer, Johannes A. Jehle, Regina G. Kleespies, Jörg T. Wennmann

The oak processionary moth (OPM) Thaumetopoea processionea is a pest of oak trees and poses health risks to humans due to the urticating setae of later instar larvae. For this reason, it is difficult to rear OPM under laboratory conditions, carry out bioassays or examine larvae for pathogens. Biological control targets the early larval instars and is based primarily on commercial preparations of Bacillus thuringiensis ssp. kurstaki (Btk). To test the entomopathogenic potential of other spore-forming bacteria, a user-friendly bioassay system was developed that (i) applies bacterial spore suspensions by oak bud dipping, (ii) targets first instar larvae through feeding exposure and (iii) takes into account their group-feeding behavior. A negligible mortality in the untreated control proved the functionality of the newly established bioassay system. Whereas the commercial Btk HD-1 strain was used as a bioassay standard and confirmed as being highly efficient, a Bacillus wiedmannii strain was ineffective in killing OPM larvae. Larvae, which died during the infection experiment, were further subjected to Nanopore sequencing for a metagenomic approach for entomopathogen detection. It further corroborated that B. wiedmannii was not able to infect and establish in OPM, but identified potential insect pathogenic species from the genera Serratia and Pseudomonas.

橡树飞蛾(OPM)Thaumetopoea processionea 是橡树的一种害虫,由于后期幼虫的刚毛具有荨麻疹性,因此对人类健康构成威胁。因此,很难在实验室条件下饲养 OPM、进行生物测定或对幼虫进行病原体检查。生物防治的目标是幼虫的早期龄期,主要基于苏云金芽孢杆菌(Btk)的商业制剂。为了测试其他孢子形成细菌的昆虫致病潜力,我们开发了一套用户友好型生物测定系统,(i) 通过橡树芽浸渍法施用细菌孢子悬浮液,(ii) 针对初龄幼虫进行取食暴露,(iii) 考虑其群体取食行为。未经处理的对照组死亡率可以忽略不计,这证明了新建立的生物测定系统的功能。商业 Btk HD-1 菌株被用作生物测定标准,并被证实具有很高的效率,而 B. wiedmannii 菌株却不能有效杀死 OPM 幼虫。对感染实验中死亡的幼虫进一步进行了纳米孔测序,以元基因组方法检测昆虫病原体。结果进一步证实,B.wiedmannii菌株无法感染OPM幼虫并在其体内生长,但从沙雷氏菌属和假单胞菌属中鉴定出了潜在的昆虫致病菌种。
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引用次数: 0
Long-term suppression of turfgrass insect pests with native persistent entomopathogenic nematodes 用本地持久性昆虫病原线虫长期抑制草坪害虫
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-03 DOI: 10.1016/j.jip.2024.108123
Albrecht M. Koppenhöfer, Ana Luiza Sousa

Entomopathogenic nematodes (EPNs) can control several important turfgrass insect pests including white grubs, weevils, cutworms, and sod webworms. But most of the research has focused on inundative releases in a biopesticide strategy using EPN strains that may have lost some of their ability to persist effectively over years of lab maintenance and / or selection for virulence and efficient mass-production. Our study examined the potential of fresh field isolate mixes of endemic EPNs to provide multi-year suppression of turfgrass insect pests. In early June 2020, we applied isolate mixes from golf courses of the EPNs Steinernema carpocapsae, Heterorhabditis bacteriophora, and their combination to plots straddling fairway and rough on two golf courses in central New Jersey, USA. Populations of EPNs and insect pests were sampled on the fairway and rough side of the plots from just before EPN application until October 2022. EPN populations increased initially in plots treated with the respective species. Steinernema carpocapsae densities stayed high for most of the experiment. Heterorhabditis bacteriophora densities decreased after 6 months and stabilized at lower levels. Several insect pests were reduced across the entire experimental period. In the fairway, the combination treatment reduced annual bluegrass weevil larvae (59 % reduction) and adults (74 %); S. carpocapsae reduced only adults (42 %). White grubs were reduced by H. bacteriophora (67 %) and the combination (63 %). Black turfgrass ataenius adults were reduced in all EPN treatments (43–62 %) in rough and fairway. Sod webworm larvae were reduced by S. carpocapsae in the fairway (75 %) and the rough (100 %) and by H. bacteriophora in the rough (75 %). Cutworm larvae were reduced in the fairway by S. carpocapsae (88 %) and the combination (75 %). Overall, our observations suggest that inoculative applications of fresh field isolate mixes of endemic EPNs may be a feasible approach to long-term suppression of insect pests in turfgrass but may require periodic reapplications.

昆虫病原线虫(EPNs)可以控制几种重要的草坪害虫,包括白蛴螬、象鼻虫、草皮虫和草皮网虫。但大多数研究都集中在生物农药策略中的淹没释放,使用的 EPN 菌株可能在多年的实验室维护和/或毒力选择及高效量产过程中丧失了一些有效存活的能力。我们的研究考察了地方性 EPN 新鲜田间分离混合物多年抑制草坪害虫的潜力。2020 年 6 月初,我们在美国新泽西州中部的两个高尔夫球场的球道和草地上施用了来自高尔夫球场的 Steinernema carpocapsae 和 Heterorhabditis bacteriophora EPNs 分离物混合物及其组合。从施用 EPN 之前到 2022 年 10 月,在地块的球道和果岭一侧对 EPN 和害虫的数量进行了采样。在施用了相应物种的地块上,EPN 的数量最初有所增加。Steinernema carpocapsae 的密度在实验的大部分时间里都很高。细菌异型丝虫的密度在 6 个月后有所下降,并稳定在较低水平。在整个实验期间,几种害虫的数量都有所减少。在球道上,混合处理减少了一年生蓝草象鼻虫的幼虫(减少了 59%)和成虫(74%);S. carpocapsae 只减少了成虫(42%)。白蛴螬的虫害减少率为 H. bacteriophora(67%)和混合处理(63%)。所有 EPN 处理(43%-62%)都能减少粗草坪和球道上的黑色草皮蚜成虫。草皮网虫幼虫在球道(75 %)和粗草坪(100 %)中被鲤形蝇(S. carpocapsae)杀死,在粗草坪(75 %)中被细菌蝇(H. bacteriophora)杀死。切虫幼虫在球道(88%)和草地(75%)中被鲤形蝇(S. carpocapsae)减少。总之,我们的观察结果表明,接种应用当地EPN的新鲜田间分离物混合物可能是长期抑制草坪害虫的一种可行方法,但可能需要定期重新应用。
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引用次数: 0
Rhodobacter sphaeroides supplementation improves defense ability of Chinese mitten crab Eriocheir sinensis against Shewanella putrefaciens infection via intestinal flora and metabolism regulation 通过肠道菌群和新陈代谢调节补充水合根瘤菌提高中华绒螯蟹对谢瓦纳菌感染的防御能力
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-27 DOI: 10.1016/j.jip.2024.108120
Haipeng Cao , Xurui Zheng , Chenhao Teng , La Xu , Youhong Wang , Chunlei Gai , Haibin Ye

Shewanella putrefaciens is a vital bacterial pathogen implicated in serious diseases in Chinese mitten crab Eriocheir sinensis. Yet the use of probiotics to improve the defense ability of E. sinensis against S. putrefaciens infection remains poorly understood. In the present study, the protective effect of dietary R. sphaeroides against S. putrefaciens infection in E. sinensis was evaluated through antioxidant capability, immune response, and survival under bacterial challenge assays, and its protective mechanism was further explored using a combination of intestinal flora and metabolome assays. Our results indicated that dietary R. sphaeroides could significantly improve immunity and antioxidant ability of Chinese mitten crabs, thereby strengthening their disease resistance with the relative percentage survival of 81.09% against S. putrefaciens. In addition, dietary R. sphaeroides could significantly alter the intestinal microbial composition and intestinal metabolism of crabs, causing not only the reduction of potential threatening pathogen load but also the increase of differential metabolites in tryptophan metabolism, pyrimidine metabolism, and glycerophospholipid metabolism. Furthermore, the regulation of differential metabolites such as N-Acetylserotonin positively correlated with beneficial Rhodobacter could be a potential protection strategy for Shewanella infection. To the best of our knowledge, this is the first study to illustrate the protective effect and mechanism of R. sphaeroides supplementation to protect E. sinensis against S. putrefaciens infection.

中华绒螯蟹(Eriocheir sinensis)的严重疾病与腐生雪旺菌(Shewanella putrefaciens)是一种重要的细菌病原体。然而,如何利用益生菌来提高中华绒螯蟹的防御能力?在本研究中,通过抗氧化能力、免疫反应和细菌挑战下的存活率实验评估了膳食中的R. sphaeroides对中华绒螯蟹S. putrefaciens感染的保护作用,并结合肠道菌群和代谢组实验进一步探讨了其保护机制。我们的研究结果表明,膳食水苏糖能显著提高中华绒螯蟹的免疫力和抗氧化能力,从而增强其抗病能力,对中华绒螯蟹的相对存活率为81.09%。此外,饵料中的水螅虫能显著改变中华绒螯蟹的肠道微生物组成和肠道代谢,不仅能减少潜在的威胁性病原体负荷,还能增加色氨酸代谢、嘧啶代谢和甘油磷脂代谢中的差异代谢产物。此外,与有益的罗氏菌正相关的 N-乙酰羟色胺等差异代谢物的调节可能是一种潜在的保护策略,可防止雪旺菌感染。据我们所知,这是第一项说明补充水合根瘤菌可保护中华鹅膏菌免受谢瓦氏菌感染的保护作用和机制的研究。
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引用次数: 0
Virus discovery in cultured portunid crabs: Genomic, phylogenetic, histopathological and microscopic characterization of a reovirus and a new bunyavirus 在养殖的梭子蟹中发现病毒:一种再病毒和一种新的布尼亚病毒的基因组、系统发生学、组织病理学和显微镜鉴定。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-27 DOI: 10.1016/j.jip.2024.108118
Camila Prestes dos Santos Tavares , Samuel Paulo Cibulski , Gisela Geraldine Castilho-Westphal , Mingli Zhao , Ubiratan de Assis Teixeira Silva , Eric J. Schott , Antonio Ostrensky

Portunid crabs are distributed worldwide and highly valued in aquaculture. Viral infections are the main limiting factor for the survival of these animals and, consequently, for the success of commercial-scale cultivation. However, there is still a lack of knowledge about the viruses that infect cultured portunid crabs worldwide. Herein, the genome sequence and phylogeny of Callinectes sapidus reovirus 2 (CsRV2) are described, and the discovery of a new bunyavirus in Callinectes danae cultured in southern Brazil is reported. The CsRV2 genome sequence consists of 12 dsRNA segments (20,909 nt) encode 13 proteins. The predicted RNA-dependent RNA polymerase (RdRp) shows a high level of similarity with that of Eriocheir sinensis reovirus 905, suggesting that CsRV2 belongs to the genus Cardoreovirus. The CsRV2 particles are icosahedral, measuring approximately 65 nm in diameter, and exhibit typical non-turreted reovirus morphology. High throughput sequencing data revealed the presence of an additional putative virus genome similar to bunyavirus, called Callinectes danae Portunibunyavirus 1 (CdPBV1). The CdPBV1 genome is tripartite, consisting of 6,654 nt, 3,120 nt and 1,656 nt single-stranded RNA segments that each encode a single protein. Each segment has a high identity with European shore crab virus 1, suggesting that CdPBV1 is a new representative of the family Cruliviridae. The putative spherical particles of CdPBV1 measure ∼120 nm in diameter and present a typical bunyavirus morphology. The results of the histopathological analysis suggest that these new viruses can affect the health and, consequently, the survival of C. danae in captivity. Therefore, the findings reported here should be used to improve prophylactic and pathogen control practices and contribute to the development and optimization of the production of soft-shell crabs on a commercial scale in Brazil.

梭子蟹分布于世界各地,在水产养殖业中具有很高的价值。病毒感染是这些动物生存的主要限制因素,因此也是商业规模养殖成功的主要限制因素。然而,人们对全球养殖的梭子蟹所感染的病毒仍然缺乏了解。本文描述了Callinectes sapidus reovirus 2(CsRV2)的基因组序列和系统发育,并报告了在巴西南部养殖的Callinectes danae中发现的一种新的布尼亚病毒。CsRV2 基因组序列由 12 个 dsRNA 片段(20,909 nt)组成,编码 13 个蛋白质。预测的 RNA 依赖性 RNA 聚合酶(RdRp)与 Eriocheir sinensis reovirus 905 高度相似,表明 CsRV2 属于 Cardoreovirus 属。CsRV2 颗粒呈二十面体,直径约 65 nm,表现出典型的非卷曲再病毒形态。高通量测序数据揭示了另一种与布尼亚病毒相似的假定病毒基因组,名为Callinectes danae Portunibunyavirus 1(CdPBV1)。CdPBV1 基因组由 6,654 nt、3,120 nt 和 1,656 nt 单链 RNA 片段组成,每个片段编码一种蛋白质。每个片段都与欧洲滨蟹病毒 1 有很高的同一性,这表明 CdPBV1 是 Cruliviridae 科的一个新代表。CdPBV1 的假定球形颗粒直径为 120 nm,呈现典型的布尼亚病毒形态。组织病理学分析结果表明,这些新病毒会影响丹顶鹤的健康,进而影响其在人工饲养条件下的生存。因此,本文的研究结果应用于改善预防和病原体控制措施,并有助于巴西软壳蟹商业规模生产的发展和优化。
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引用次数: 0
Characterisation of Nematoda and Digenea in selected Australian freshwater snails 选定的澳大利亚淡水蜗牛中线虫纲和 Digenea 纲的特征
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-27 DOI: 10.1016/j.jip.2024.108116
Shokoofeh Shamsi , Alice Banfield , Nidhish Francis , Diane P. Barton , Matthew McLellan

Freshwater snails are integral to local ecosystems as a primary food source for various vertebrate species, thereby contributing significantly to ecological food webs. However, their role as intermediate hosts also makes them pivotal in the transmission of parasites. In Australia, research on freshwater snails has predominantly focused on their role as intermediate hosts for livestock parasites, while there has been limited exploration of the impact of these parasites on snail health and population dynamics. The aim of this study was to determine parasitic infection in freshwater snails. This study was conducted in the south-eastern region of Australia, in 2022. A total of 163 freshwater snails from four different species were collected and examined in the Murrumbidgee catchment area in the southeastern part of Australia during the Southern Hemisphere summer and autumn months (February to May). The species included Isidorella hainesii, Glyptophysa novaehollandica, Bullastra lessoni (endemic species), and Physella acuta (an introduced species). Through the analysis of sequence data from the various regions of the nuclear ribosomal DNA, we determined that the Digenea species in this study belonged to three distinct species, including Choanocotyle hobbsi, Petasiger sp. and an unidentified species belonging to Plagiorchioidea. Additionally, analysis of the sequences from Nematoda found in this study, revealed they could be categorized into two separate taxa, including Krefftascaris sp. and an unidentified nematode closely associated with plant and soil nematodes. This research holds significant implications for the future understanding and conservation of Australian freshwater ecosystems. Most parasites found in the present study complete their life cycle in snails and turtles. As many of freshwater snail and turtle species in Australia are endemic and face population threats, exploring the potential adverse impacts of parasitic infections on snail and turtle health, is crucial for advancing our understanding of these ecosystems and also paving the way for future research and conservation efforts. While none of the native snail species in the present study have been listed as endangered or threatened, this may simply be attributed to the absence of regular population surveys.

淡水蜗牛是当地生态系统不可或缺的一部分,是各种脊椎动物的主要食物来源,因此对生态食物网的贡献很大。然而,淡水蜗牛作为中间宿主的角色也使它们在寄生虫的传播中起着举足轻重的作用。在澳大利亚,对淡水蜗牛的研究主要集中在它们作为家畜寄生虫中间宿主的作用上,而对这些寄生虫对蜗牛健康和种群动态的影响的探索却很有限。本研究旨在确定淡水蜗牛的寄生虫感染情况。这项研究于 2022 年在澳大利亚东南部地区进行。在南半球的夏秋季节(2 月至 5 月),研究人员在澳大利亚东南部的 Murrumbidgee 集水区共采集并检测了 163 只淡水蜗牛,这些蜗牛来自 4 个不同的物种。这些物种包括 Isidorella hainesii、Glyptophysa novaehollandica、Bullastra lessoni(特有物种)和 Physella acuta(引进物种)。通过分析核核糖体 DNA 各区域的序列数据,我们确定本研究中的 Digenea 物种属于三个不同的物种,包括 Choanocotyle hobbsi、Petasiger sp.和属于 Plagiorchioidea 的一个未确定物种。此外,对本研究中发现的线虫序列的分析表明,它们可分为两个独立的类群,包括 Krefftascaris sp.这项研究对未来了解和保护澳大利亚淡水生态系统具有重要意义。本研究中发现的大多数寄生虫都是在蜗牛和海龟体内完成其生命周期的。由于澳大利亚的许多淡水蜗牛和海龟物种都是地方性物种,面临着种群威胁,因此探索寄生虫感染对蜗牛和海龟健康的潜在不利影响,对于增进我们对这些生态系统的了解至关重要,同时也为未来的研究和保护工作铺平了道路。虽然本研究中没有一个本地蜗牛物种被列为濒危或受威胁物种,但这可能仅仅是因为缺乏定期的种群调查。
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引用次数: 0
First report of Perkinsus marinus occurrence associated with wild Pacific oysters Crassostrea gigas from the west coast of Korea 首次报告与韩国西海岸的野生太平洋牡蛎(Crassostrea gigas)有关的海鲈发生情况
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-27 DOI: 10.1016/j.jip.2024.108119
Seung-Hyeon Kim , S.D.N.K. Bathige , Hyung-Bae Jeon , Donghyun Lee , Kwang-Sik Choi , Hyoun Joong Kim , Kyung-Il Park

This study reports the occurrence of Perkinsus marinus associated with wild Pacific oyster (Crassostrea gigas) specimens collected along the west coast of Korea. Confirmation of P. marinus presence was achieved by conventional PCR using World Organization of Animal Health (WOAH)-recommended primers that specifically targeted regions of the rDNA locus (ITS1, 5.8S, and ITS2). Sequencing of 10 samples revealed two distinct sequences differing by a single base pair, indicating potential haplotype variability. One sequence closely resembled the P. marinus strain found in Maryland, USA, whereas the other exhibited divergence, indicative of species diversity in the Korean strain, as was evident from the haplotype network analysis. Further validation involved the Ray’s Fluid Thioglycollate Medium (RFTM) assay, which initially yielded inconclusive results, possibly due to low infection intensity. Subsequently, RFTM and 2 M NaOH assays conducted on the isolates in the present study, cultured P. marinus cells in standard DMEM/F12 medium, and a positive P. marinus strain (ATCC 50509), revealed characteristic hypnospores of P. marinus upon Lugol’s iodine staining. These comprehensive investigations underscore the conclusive confirmation of P. marinus in Korean waters and mark a significant milestone in our understanding of the distribution and characteristics of this parasite in previously unreported regions.

本研究报告了在韩国西海岸采集的野生太平洋牡蛎(Crassostrea gigas)标本中发现的Perkinsus marinus。使用世界动物卫生组织(WOAH)推荐的引物,通过传统的 PCR 方法确认了 P. marinus 的存在,这些引物专门针对 rDNA 基因座的区域(ITS1、5.8S 和 ITS2)。对 10 个样本进行测序后发现,两个不同的序列只有一个碱基对的差异,这表明可能存在单倍型变异。其中一个序列与在美国马里兰州发现的 P. marinus 菌株非常相似,而另一个序列则表现出差异,这表明韩国菌株存在物种多样性,单倍型网络分析也证明了这一点。进一步的验证涉及雷氏硫代胶体培养基(RFTM)检测,最初的结果并不确定,可能是由于感染强度较低。随后,对本研究中的分离菌株、在标准 DMEM/F12 培养基中培养的海蝽细胞以及阳性海蝽菌株(ATCC 50509)进行了 RFTM 和 2 M NaOH 检测,在鲁戈尔碘染色后发现了海蝽特有的下孢子。这些全面的调查强调了在韩国水域发现海牛寄生虫的确凿证据,标志着我们对这种寄生虫在以前未报道地区的分布和特征的了解达到了一个重要的里程碑。
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引用次数: 0
RNA virus diversity and prevalence in field and laboratory populations of melon fly throughout its distribution 瓜实蝇分布区田间和实验室种群中的 RNA 病毒多样性和流行率。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-26 DOI: 10.1016/j.jip.2024.108117
Sanjay Kumar Pradhan , Jennifer L. Morrow , Stephen R. Sharpe , Ashok Karuppannasamy , Ellango Ramasamy , Shivanna Bynakal , Manamohan Maligeppagol , Asokan Ramasamy , Markus Riegler

Insects have a rich diversity of RNA viruses that can either cause acute infections or persist in host populations without visible symptoms. The melon fly, Zeugodacus cucurbitae (Tephritidae) causes substantial economic losses through infestation of diverse cucurbit and other crops. Of Indomalayan origin, it is now established in many tropical regions of the world. The virome diversity of Z. cucurbitae is largely unknown across large parts of its distribution, including the Indian subcontinent. We have analysed three transcriptomes each of one field–collected and one laboratory-reared Z. cucurbitae population from Bangalore (India) and discovered genomes of ten putative RNA viruses: two sigmaviruses, one chimbavirus, one cripavirus, one noda-like virus, one nora virus, one orbivirus, one partiti-like virus, one sobemovirus and one toti-like virus. Analysis of the only available host genome of a Hawaiian Z. cucurbitae population did not detect host genome integration of the detected viruses. While all ten viruses were found in the Bangalore field population only seven were detected in the laboratory population, indicating that these seven may cause persistent covert infections. Using virus-specific RNA-dependent RNA polymerase gene primers, we detected nine of the RNA viruses with an overall low variant diversity in some but not all individual flies from four out of five Indian regions. We then screened 39 transcriptomes of Z. cucurbitae laboratory populations from eastern Asia (Guangdong, Hainan, Taiwan) and the Pacific region (Hawaii), and detected seven of the ten virus genomes. We found additional genomes of a picorna-like virus and a negev-like virus. Hawaii as the only tested population from the fly’s invasive range only had one virus. Our study provides evidence of new and high RNA virus diversity in Indian populations within the original range of Z. cucurbitae, as well as the presence of persistent covert infections in laboratory populations. It builds the basis for future research of tephritid-associated RNA viruses, including their host effects, epidemiology and application potential in biological control.

昆虫体内的 RNA 病毒种类丰富,既可引起急性感染,也可在寄主群体中持续存在而不出现明显症状。瓜实蝇(Zeugodacus cucurbitae,Tephritidae)为害多种葫芦科和其他作物,造成重大经济损失。它起源于印度洋,现已在世界许多热带地区定居。在包括印度次大陆在内的大部分地区,Z. cucurbitae 的病毒组多样性在很大程度上是未知的。我们分析了从印度班加罗尔(Bangalore)野外采集的和实验室饲养的葫芦科植物的三个转录组,发现了十种推测的 RNA 病毒的基因组:两种西格玛病毒(sigmaviruses)、一种chimbavirus、一种cripavirus、一种noda-like virus、一种nora virus、一种orbivirus、一种partiti-like virus、一种sobemovirus 和一种toti-like virus。对夏威夷 Z. cucurbitae 种群唯一可用的宿主基因组进行分析后,没有检测到所发现病毒的宿主基因组整合。虽然在班加罗尔田间种群中发现了所有十种病毒,但在实验室种群中只检测到七种,这表明这七种病毒可能会造成持续的隐性感染。利用病毒特异性 RNA 依赖性 RNA 聚合酶基因引物,我们在印度五个地区中的四个地区的部分而非全部苍蝇个体中检测到了九种 RNA 病毒,其变异多样性总体较低。然后,我们筛选了来自亚洲东部(广东、海南、台湾)和太平洋地区(夏威夷)的葫芦蝇实验室种群的 39 个转录组,检测到了 10 个病毒基因组中的 7 个。我们还发现了一种类似皮卡病毒和一种类似内盖夫病毒的基因组。夏威夷作为苍蝇入侵范围内唯一接受检测的种群,只有一种病毒。我们的研究提供了新的证据,证明葫芦蝇原始分布区内的印度种群中存在高度的 RNA 病毒多样性,以及实验室种群中存在持续的隐性感染。这项研究为今后研究与牛舌蝇相关的 RNA 病毒奠定了基础,包括其宿主效应、流行病学和在生物防治中的应用潜力。
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引用次数: 0
Molecular characterization, expression and antibacterial function of a macin, HdMac, from Haliotis discus hannai 一种来自汉白玉蝶形花的 macin(HdMac)的分子特征、表达和抗菌功能
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-16 DOI: 10.1016/j.jip.2024.108113
Chunli Jiao , Jian Ruan , Wei Sun , Xinze Zhang , Xiaobo Liu , Guodong Sun , Caili Liu , Chunxiao Sun , Xiuhui Tian , Dinglong Yang , Lizhu Chen , Zhongquan Wang

Macins are a family of antimicrobial peptides, which play multiple roles in the elimination of invading pathogens. In the present study, a macin was cloned and characterized from Pacific abalone Haliotis discus hannai (Designated as HdMac). Analysis of the conserved domain suggested that HdMac was a new member of the macin family. In non-stimulated abalones, HdMac transcripts were constitutively expressed in all five tested tissues, especially in hemocytes. After Vibrio harveyi stimulation, the expression of HdMac mRNA in hemocytes was significantly up-regulated at 12 hr (P < 0.01). RNAi-mediated knockdown of HdMac transcripts affected the survival rates of abalone against V. harveyi. Moreover, recombinant protein of HdMac (rHdMac) exhibited high antibacterial activities against invading bacteria, especially for Vibrio anguillarum. In addition, rHdMac possessed binding activities towards glucan, lipopolysaccharides (LPS), and peptidoglycan (PGN), but not chitin in vitro. Membrane integrity analysis revealed that rHdMac could increase the membrane permeability of bacteria. Meanwhile, both the phagocytosis and chemotaxis ability of hemocytes could be significantly enhanced by rHdMac. Overall, the results showed that HdMac could function as a versatile molecule involved in immune responses of H. discus hannai.

猕猴蛋白是抗菌肽的一个家族,在消灭入侵病原体方面发挥着多种作用。本研究克隆并鉴定了来自太平洋鲍鱼 Haliotis discus hannai 的一种 macin(命名为 HdMac)。对保守结构域的分析表明,HdMac 是 macin 家族的新成员。在未受刺激的鲍鱼体内,HdMac转录本在所有五个测试组织中均为组成型表达,尤其是在血细胞中。哈维弧菌刺激后,血细胞中 HdMac mRNA 的表达在 12 小时后显著上调(P < 0.01)。RNAi- 介导的 HdMac 转录本敲除影响了鲍鱼对 Harveyi弧菌的存活率。此外,HdMac 的重组蛋白(rHdMac)对入侵细菌,尤其是鳗弧菌具有很高的抗菌活性。此外,rHdMac 对葡聚糖、脂多糖(LPS)和肽聚糖(PGN)具有结合活性,但对几丁质不具有结合活性。膜完整性分析表明,rHdMac 可增加细菌的膜通透性。同时,rHdMac 还能显著增强血细胞的吞噬能力和趋化能力。总之,研究结果表明 HdMac 可作为一种多功能分子参与盘尾丝菌的免疫反应。
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引用次数: 0
期刊
Journal of invertebrate pathology
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