首页 > 最新文献

Journal of Plant Interactions最新文献

英文 中文
Finding optimal microorganisms to increase crop productivity and sustainability under drought – a structured reflection 在干旱条件下寻找提高作物生产力和可持续性的最佳微生物——一种结构化的反映
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2023-03-12 DOI: 10.1080/17429145.2023.2178680
Ana Paula Rosa, Teresa Dias, A. Mouazen, C. Cruz, M. Santana
ABSTRACT Considering the more frequent and longer drought events due to climate change, improving plant drought tolerance became a priority. The search for plant growth promoting rhizobacteria (PGPR) able to improve plant drought tolerance has been long addressed, but with inconsistent results. Here, we summarize the PGPR mechanisms that improve plant drought tolerance, identify the pitfalls in current PGPR isolation and selection routines, and discuss the key points to define new strategies to get optimal PGPR for plant drought tolerance. Drought and host genotype impact rhizo-communities, and host-mediated selection strategies may be used to obtain a drought-adapted rhizomicrobiome that can be a source for PGPR isolation. Alternatively, an integrated omics-level analysis can improve our knowledge on the mechanisms of rhizomicrobiome construction, and a targeted approach can be designed, which will be focused on key PGP traits. New strategies to build PGPR consortia for improvement of plant drought tolerance are also suggested.
{"title":"Finding optimal microorganisms to increase crop productivity and sustainability under drought – a structured reflection","authors":"Ana Paula Rosa, Teresa Dias, A. Mouazen, C. Cruz, M. Santana","doi":"10.1080/17429145.2023.2178680","DOIUrl":"https://doi.org/10.1080/17429145.2023.2178680","url":null,"abstract":"ABSTRACT Considering the more frequent and longer drought events due to climate change, improving plant drought tolerance became a priority. The search for plant growth promoting rhizobacteria (PGPR) able to improve plant drought tolerance has been long addressed, but with inconsistent results. Here, we summarize the PGPR mechanisms that improve plant drought tolerance, identify the pitfalls in current PGPR isolation and selection routines, and discuss the key points to define new strategies to get optimal PGPR for plant drought tolerance. Drought and host genotype impact rhizo-communities, and host-mediated selection strategies may be used to obtain a drought-adapted rhizomicrobiome that can be a source for PGPR isolation. Alternatively, an integrated omics-level analysis can improve our knowledge on the mechanisms of rhizomicrobiome construction, and a targeted approach can be designed, which will be focused on key PGP traits. New strategies to build PGPR consortia for improvement of plant drought tolerance are also suggested.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43180641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Genome-wide identification and expression analysis of the CHYR gene family in Phaseolus vulgaris under abiotic stress at the seeding stage 苗期非生物胁迫下菜豆CHYR基因家族的全基因组鉴定及表达分析
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2023-02-24 DOI: 10.1080/17429145.2023.2182922
Xianxin Meng, Zhengong Yin, Guangdong Yang, Shuhong Wei, Y. Guo, Wei Zhang, Qianqian Wang
{"title":"Genome-wide identification and expression analysis of the CHYR gene family in Phaseolus vulgaris under abiotic stress at the seeding stage","authors":"Xianxin Meng, Zhengong Yin, Guangdong Yang, Shuhong Wei, Y. Guo, Wei Zhang, Qianqian Wang","doi":"10.1080/17429145.2023.2182922","DOIUrl":"https://doi.org/10.1080/17429145.2023.2182922","url":null,"abstract":"","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43180845","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phytoconstituents of Butterbur (P. japonicus), their metabolic pathway and ability to modulate bone morphogenic protein (BMP) signaling 刺桐的植物成分、代谢途径和调节骨形态发生蛋白(BMP)信号传导的能力
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2023-02-24 DOI: 10.1080/17429145.2023.2181415
A. Belal, Mona H. Ibrahim, W. Mahdi, Sultan Alshehri, H. Ebrahim, M. Ghoneim, M. El-Sherbiny, Ahmed B. M. Mehany, Heba I. Ghamry
ABSTRACT A library of natural sesquiterpene and phenolic compounds from Petasites japonicus are being investigated through different computational techniques to study their ability to target BMP. Lipinski rule, ADMET, molecular docking studies and metabolism were used to reach promising candidates with proposed activity against BMP. Four sesquiterpenes (kablicin, petisinol, bakkenolide D and bakkenolide IIIa) and four phenolic compounds exhibited drug-like properties (caffeic acid, petasiphenol, petasitesin A and petasitesin B), so they deserve further clinical exploration as bone loss modulators. The phenolic compounds specially fukinolic acid and petasiphenol showed lower binding energy with both BMPRIA and BMPRII than Icariin agonist and sesquiterpenes. Bakkenolide IIIa showed dual potential on both BMPRIA and BMPRII with binding energies equal – 7.82 and – 9.9 Kcal/mol respectively, which is more better score than Betulinic acid agonist. This research is focusing on plant-human interactions and exploring the ability of plant constituents to modulate a human protein such as BMP.
{"title":"Phytoconstituents of Butterbur (P. japonicus), their metabolic pathway and ability to modulate bone morphogenic protein (BMP) signaling","authors":"A. Belal, Mona H. Ibrahim, W. Mahdi, Sultan Alshehri, H. Ebrahim, M. Ghoneim, M. El-Sherbiny, Ahmed B. M. Mehany, Heba I. Ghamry","doi":"10.1080/17429145.2023.2181415","DOIUrl":"https://doi.org/10.1080/17429145.2023.2181415","url":null,"abstract":"ABSTRACT A library of natural sesquiterpene and phenolic compounds from Petasites japonicus are being investigated through different computational techniques to study their ability to target BMP. Lipinski rule, ADMET, molecular docking studies and metabolism were used to reach promising candidates with proposed activity against BMP. Four sesquiterpenes (kablicin, petisinol, bakkenolide D and bakkenolide IIIa) and four phenolic compounds exhibited drug-like properties (caffeic acid, petasiphenol, petasitesin A and petasitesin B), so they deserve further clinical exploration as bone loss modulators. The phenolic compounds specially fukinolic acid and petasiphenol showed lower binding energy with both BMPRIA and BMPRII than Icariin agonist and sesquiterpenes. Bakkenolide IIIa showed dual potential on both BMPRIA and BMPRII with binding energies equal – 7.82 and – 9.9 Kcal/mol respectively, which is more better score than Betulinic acid agonist. This research is focusing on plant-human interactions and exploring the ability of plant constituents to modulate a human protein such as BMP.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49212450","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Transcriptome analyses revealed chilling response genes in mango (Mangifera indica L. cv. Keitt) leaf 转录组分析揭示了芒果(Mangifera indica L. cv.)的低温反应基因。Keitt)叶
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2023-02-15 DOI: 10.1080/17429145.2023.2172226
Mark Owusu Adjei, Jun Ma, R. Luo, Jianfeng Huang, Zhichang Zhao, Yingying Wang, A. Gao
ABSTRACT Mangifera indica L. cv. Keitt is a cold-stress fruit plant native to China's drought river valley. Chilling stress affects productivity. Understanding the mechanisms of chilling stress is important to increasing chilling resistance in mango. Leaves of Keitti were subjected to 4 °C for 0, 3, 6, and 9 h for RNA-Seq-based transcriptome analysis, respectively. The chlorophyll content, carotenoid content, catalase, and peroxidase activities significantly increased during 9 h. The leaves responded to the stress by enhancing photosynthetic pigment content and antioxidant enzyme activity. After 3 h of chilling, 410 genes were differentially expressed. WRKY70 and PLD1 were significantly up-regulated after 9 h. Compared to 9 and 0 h, there were 1123 DEG. The DEGs are enriched in hormonal signal transduction, secondary metabolites, and the abiotic stress response. Similarly, the transcriptional factor families including NCED2, MYB73, and HLH162 up-regulated. The study will promote research on the development of chill-resistant mangoes.
{"title":"Transcriptome analyses revealed chilling response genes in mango (Mangifera indica L. cv. Keitt) leaf","authors":"Mark Owusu Adjei, Jun Ma, R. Luo, Jianfeng Huang, Zhichang Zhao, Yingying Wang, A. Gao","doi":"10.1080/17429145.2023.2172226","DOIUrl":"https://doi.org/10.1080/17429145.2023.2172226","url":null,"abstract":"ABSTRACT Mangifera indica L. cv. Keitt is a cold-stress fruit plant native to China's drought river valley. Chilling stress affects productivity. Understanding the mechanisms of chilling stress is important to increasing chilling resistance in mango. Leaves of Keitti were subjected to 4 °C for 0, 3, 6, and 9 h for RNA-Seq-based transcriptome analysis, respectively. The chlorophyll content, carotenoid content, catalase, and peroxidase activities significantly increased during 9 h. The leaves responded to the stress by enhancing photosynthetic pigment content and antioxidant enzyme activity. After 3 h of chilling, 410 genes were differentially expressed. WRKY70 and PLD1 were significantly up-regulated after 9 h. Compared to 9 and 0 h, there were 1123 DEG. The DEGs are enriched in hormonal signal transduction, secondary metabolites, and the abiotic stress response. Similarly, the transcriptional factor families including NCED2, MYB73, and HLH162 up-regulated. The study will promote research on the development of chill-resistant mangoes.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42601282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Temporal behavior of wheat – Puccinia striiformis interaction prompted defense-responsive genes 小麦与纹状锈菌互作的时间行为提示防御反应基因
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2022-12-31 DOI: 10.1080/17429145.2022.2082570
C. Lata, P. Prasad, O. P. Gangwar, S. Adhikari, R. Thakur, Siddanna Savadi, K. Kumar, Subodh Kumar, G. Singh, S. C. Bhardwaj
ABSTRACT Wheat stripe rust caused by Puccinia striiformis Westend. f.sp. tritici (Pst) is a global threat to wheat production. Genetic modification of defense-responsive factors in wheat rust interactions could help devise strategies to control stripe rust on wheat. This experiment studied the interaction between Pst pathotype 78S84 in PBW343 and FLW-3 by evaluating the quantitative temporal transcription profiles of defense-related genes at different time points. This is the first attempt to exhibit inter-connections among different proteins and depict a hypothetical model for the mechanism of R gene-mediated resistance. Transcript levels of LTP, AQP1, PR1, PR2, PR4, and PR10 were relatively higher under compatible interaction, while under incompatible interaction, transcript levels of COMT1, PRA2, WCAB, and PR9 were significantly high. This study projected the role of defense-responsive genes, inter-networking of proteins, and R gene-mediated resistance between wheat and stripe rust.
小麦条锈病是由小麦条锈病引起的。f.sp。小麦小麦黑穗病(Pst)是小麦生产的全球性威胁。对小麦锈病相互作用中的防御反应因子进行基因改造,有助于制定小麦条锈病防治策略。本实验通过评估不同时间点防御相关基因的定量转录谱,研究PBW343中Pst病理型78S84与FLW-3之间的相互作用。这是首次尝试展示不同蛋白质之间的相互联系,并描绘了R基因介导的抗性机制的假设模型。相容互作条件下,LTP、AQP1、PR1、PR2、PR4和PR10的转录水平相对较高,而不相容互作条件下,COMT1、PRA2、WCAB和PR9的转录水平显著较高。本研究预测了小麦与条锈病之间防御反应基因、蛋白间网络和R基因介导的抗性的作用。
{"title":"Temporal behavior of wheat – Puccinia striiformis interaction prompted defense-responsive genes","authors":"C. Lata, P. Prasad, O. P. Gangwar, S. Adhikari, R. Thakur, Siddanna Savadi, K. Kumar, Subodh Kumar, G. Singh, S. C. Bhardwaj","doi":"10.1080/17429145.2022.2082570","DOIUrl":"https://doi.org/10.1080/17429145.2022.2082570","url":null,"abstract":"ABSTRACT Wheat stripe rust caused by Puccinia striiformis Westend. f.sp. tritici (Pst) is a global threat to wheat production. Genetic modification of defense-responsive factors in wheat rust interactions could help devise strategies to control stripe rust on wheat. This experiment studied the interaction between Pst pathotype 78S84 in PBW343 and FLW-3 by evaluating the quantitative temporal transcription profiles of defense-related genes at different time points. This is the first attempt to exhibit inter-connections among different proteins and depict a hypothetical model for the mechanism of R gene-mediated resistance. Transcript levels of LTP, AQP1, PR1, PR2, PR4, and PR10 were relatively higher under compatible interaction, while under incompatible interaction, transcript levels of COMT1, PRA2, WCAB, and PR9 were significantly high. This study projected the role of defense-responsive genes, inter-networking of proteins, and R gene-mediated resistance between wheat and stripe rust.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":"17 1","pages":"674 - 684"},"PeriodicalIF":3.2,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43058469","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Previous interaction with phytopathogenic bacteria alters the response of Arabidopsis against Tetranychus urticae herbivory 先前与植物病原菌的相互作用改变了拟南芥对二斑叶螨草食性的反应
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2022-12-29 DOI: 10.1080/17429145.2022.2144651
Estefanía Contreras, J. Rodríguez-Herva, I. Díaz, E. López-Solanilla, Miguel Ángel Martínez
ABSTRACT Plant response to individual biotic stresses depends on its physiological state when the challenge is perceived. Optimal conditions for infestation of the spider mite Tetranychus urticae are associated with high temperatures and scarce precipitation. Here, we analyze the impact of previous interactions with the hemibiotrophic bacteria Pseudomonas syringae pv. tomato DC3000 or the necrotroph Dickeya dadantii 3937 on Arabidopsis thaliana plants under mite optimal conditions. Our results showed that both bacterial strains inoculated at adverse low humidity conditions induced the expression of JA-related genes in the plant even when disease symptoms are not observed. This effect was more evident when heat-inactivated bacteria were used, but a significant reduction in mite leaf damage was only detected when plants were previously inoculated with the heat-inactivated hemibiotroph bacteria. These results indicate that bacterial interaction compromises the plant response to subsequent herbivore stress, even under suboptimal conditions for bacterial multiplication.
{"title":"Previous interaction with phytopathogenic bacteria alters the response of Arabidopsis against Tetranychus urticae herbivory","authors":"Estefanía Contreras, J. Rodríguez-Herva, I. Díaz, E. López-Solanilla, Miguel Ángel Martínez","doi":"10.1080/17429145.2022.2144651","DOIUrl":"https://doi.org/10.1080/17429145.2022.2144651","url":null,"abstract":"ABSTRACT Plant response to individual biotic stresses depends on its physiological state when the challenge is perceived. Optimal conditions for infestation of the spider mite Tetranychus urticae are associated with high temperatures and scarce precipitation. Here, we analyze the impact of previous interactions with the hemibiotrophic bacteria Pseudomonas syringae pv. tomato DC3000 or the necrotroph Dickeya dadantii 3937 on Arabidopsis thaliana plants under mite optimal conditions. Our results showed that both bacterial strains inoculated at adverse low humidity conditions induced the expression of JA-related genes in the plant even when disease symptoms are not observed. This effect was more evident when heat-inactivated bacteria were used, but a significant reduction in mite leaf damage was only detected when plants were previously inoculated with the heat-inactivated hemibiotroph bacteria. These results indicate that bacterial interaction compromises the plant response to subsequent herbivore stress, even under suboptimal conditions for bacterial multiplication.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2022-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45995384","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bottom-up effects of fertilization and jasmonate-induced resistance independently affect the interactions between tomato plants and an insect herbivore 施肥和茉莉素诱导抗性的自下而上效应分别影响番茄植株与食草昆虫的相互作用
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2022-12-29 DOI: 10.1080/17429145.2022.2154864
Paolo Salazar-Mendoza, J. Bento, D. Silva, S. F. Pascholati, Peng Han, C. Rodriguez-Saona
ABSTRACT Whether nutrient availability interacts with induced resistance to alter plant chemistry and, consequently, the preference and performance of herbivores on plants remains unclear. We hypothesized that changing fertilizer inputs modulates responses induced by exogenous application of the defensive phytohormone methyl jasmonate (MeJA) against Tuta absoluta, a devastating pest of tomatoes. We found that tomato plants grown at or 2-fold above optimal fertilizer rates had higher nutrient content and were more preferred by T. absoluta females for oviposition and were better hosts for their offspring. MeJA increased phenolic content and volatile emissions in plants, which correlated with lower T. absoluta oviposition preference and offspring performance. However, we found no significant interactions when fertilizer and MeJA were applied simultaneously, such that induced responses against T. absoluta in tomatoes were similar regardless of fertilizer rate. These results provide novel insights into the bottom-up effects of fertilization and induced resistance on plant-insect herbivore interactions.
{"title":"Bottom-up effects of fertilization and jasmonate-induced resistance independently affect the interactions between tomato plants and an insect herbivore","authors":"Paolo Salazar-Mendoza, J. Bento, D. Silva, S. F. Pascholati, Peng Han, C. Rodriguez-Saona","doi":"10.1080/17429145.2022.2154864","DOIUrl":"https://doi.org/10.1080/17429145.2022.2154864","url":null,"abstract":"ABSTRACT Whether nutrient availability interacts with induced resistance to alter plant chemistry and, consequently, the preference and performance of herbivores on plants remains unclear. We hypothesized that changing fertilizer inputs modulates responses induced by exogenous application of the defensive phytohormone methyl jasmonate (MeJA) against Tuta absoluta, a devastating pest of tomatoes. We found that tomato plants grown at or 2-fold above optimal fertilizer rates had higher nutrient content and were more preferred by T. absoluta females for oviposition and were better hosts for their offspring. MeJA increased phenolic content and volatile emissions in plants, which correlated with lower T. absoluta oviposition preference and offspring performance. However, we found no significant interactions when fertilizer and MeJA were applied simultaneously, such that induced responses against T. absoluta in tomatoes were similar regardless of fertilizer rate. These results provide novel insights into the bottom-up effects of fertilization and induced resistance on plant-insect herbivore interactions.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":"1 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2022-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42592613","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Identification of quantitative trait loci associated with sorghum susceptibility to Asian stem borer damage 高粱对亚洲玉米螟危害易感性的数量性状基因座鉴定
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2022-12-29 DOI: 10.1080/17429145.2022.2153182
Cyprian Osinde, W. Sakamoto, H. Kajiya-Kanegae, I. Sobhy, A. Tugume, Anthony M. Nsubuga, I. Galis
{"title":"Identification of quantitative trait loci associated with sorghum susceptibility to Asian stem borer damage","authors":"Cyprian Osinde, W. Sakamoto, H. Kajiya-Kanegae, I. Sobhy, A. Tugume, Anthony M. Nsubuga, I. Galis","doi":"10.1080/17429145.2022.2153182","DOIUrl":"https://doi.org/10.1080/17429145.2022.2153182","url":null,"abstract":"","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2022-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44041914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Transcriptomic and physiological analysis reveals crucial biological pathways associated with low-temperature stress in Tunisian soft-seed pomegranate (Punica granatum L.) 转录组学和生理学分析揭示了突尼斯软籽石榴低温胁迫的关键生物学途径
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2022-12-28 DOI: 10.1080/17429145.2022.2152887
Sihui Guan, Yaqian Chai, Q. Hao, Yadong Ma, Wenliang Wan, Huiying Liu, M. Diao
ABSTRACT Low temperature severely affects the growth of pomegranate in the early spring during the production process under protected cultivation. To understand the molecular responses to cold stress in Tunisian soft-seed pomegranate, this study investigated the transcriptome profiles and physiological changes of pomegranate leaves exposed to cold stress (6 °C) and freezing stress (0°C). Some potential cold response/resistance genes involved in plant hormone signal transduction, photosynthetic systems and carbon fixation in the C4 pathway, and sucrose and galactose metabolism were identified. In addition, an analysis of physiological indicators indicated that both stresses caused cell membrane damage; the accumulation of soluble sugar, soluble protein and proline; and the occurrence of photoinhibition owing to the damage in photosynthetic apparatus and the decrease in light energy conversion efficiency and electron transfer rate as shown by the decrease in net photosynthetic rate [Pn], potential maximum photochemical efficiency of PSII [Fv/Fm], actual photochemical efficiency of PSII [YII] and photochemical quenching coefficient [qP], and the effect was much moresevere in pomegranate under freezing stress. This study results offer useful information to understand the molecular mechanism of pomegranate response to cold stress and also lay a foundation for the selection of major candidate genes to conduct molecular breeding for cold tolerance in pomegranate.
{"title":"Transcriptomic and physiological analysis reveals crucial biological pathways associated with low-temperature stress in Tunisian soft-seed pomegranate (Punica granatum L.)","authors":"Sihui Guan, Yaqian Chai, Q. Hao, Yadong Ma, Wenliang Wan, Huiying Liu, M. Diao","doi":"10.1080/17429145.2022.2152887","DOIUrl":"https://doi.org/10.1080/17429145.2022.2152887","url":null,"abstract":"ABSTRACT Low temperature severely affects the growth of pomegranate in the early spring during the production process under protected cultivation. To understand the molecular responses to cold stress in Tunisian soft-seed pomegranate, this study investigated the transcriptome profiles and physiological changes of pomegranate leaves exposed to cold stress (6 °C) and freezing stress (0°C). Some potential cold response/resistance genes involved in plant hormone signal transduction, photosynthetic systems and carbon fixation in the C4 pathway, and sucrose and galactose metabolism were identified. In addition, an analysis of physiological indicators indicated that both stresses caused cell membrane damage; the accumulation of soluble sugar, soluble protein and proline; and the occurrence of photoinhibition owing to the damage in photosynthetic apparatus and the decrease in light energy conversion efficiency and electron transfer rate as shown by the decrease in net photosynthetic rate [Pn], potential maximum photochemical efficiency of PSII [Fv/Fm], actual photochemical efficiency of PSII [YII] and photochemical quenching coefficient [qP], and the effect was much moresevere in pomegranate under freezing stress. This study results offer useful information to understand the molecular mechanism of pomegranate response to cold stress and also lay a foundation for the selection of major candidate genes to conduct molecular breeding for cold tolerance in pomegranate.","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2022-12-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45760768","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Physiological and transcriptomic analysis of antioxidant mechanisms in sweet sorghum seedling leaves in response to single and combined drought and salinity stress 甜高粱幼苗叶片对单一和组合干旱和盐碱胁迫抗氧化机制的生理和转录组学分析
IF 3.2 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2022-11-21 DOI: 10.1080/17429145.2022.2146771
Zhiheng Wang, Yuqing Wei
ABSTRACT The effects of drought, salinity, and combined stress on ROS and ROS metabolic physiology and transcriptomics in sweet sorghum seedling leaves were evaluated. The results showed that drought stress had little effect on photosynthesis, while the SOD activity, CAT activity, and the expression of their related genes were elevated in leaves, but no excessive accumulation of O2 -, H2O2, or -OH was observed. Under salinity stress, photosynthesis was inhibited, the O2 -, H2O2 and -OH contents increased significantly, and the SOD, POD, CAT activities and the expression of their related genes in leaves were elevated. Under combined stress, photosynthesis was significantly inhibited, the highest accumulation of O2 -, H2O2 and -OH contents occurred, and the SOD and POD activities and the expression of related genes in leaves were significantly increased, but the CAT was significantly decreased. These results collectively indicate that oxidative damage to sweet sorghum seedling leaves was higher with combined stress than with either drought or salinity stress alone. Under combined stress the SOD and POD activities were increased, but the CAT activity in the AsA-GSH cycle was severely reduced, demonstrating that antioxidant mechanisms in seedlings did not play a normal protective role, leaving the plants severely damaged by oxidative stress. Abbreviations: AsA: Ascorbic acid; APX: Ascorbate peroxidase; CAT: Catalase; Chl a: Chlorophyll a; Chl b: Chlorophyll b; Ci: Intercellular CO2 concentration; DHAR: Dehydroascorbate reductase; DEGs: Differentially expressed genes; DW: Dry weight; ETR: Photosynthetic electron transport rate; FW: Fresh weight; Fv/Fm: Original light energy conversion efficiency; GPX: Glutathione peroxidase; GR: Glutathione reductase; Gs: Stomatal conductance; GSH: Oxidized glutathione; H2O2: Hydrogen peroxide; MDA: Malondialdehyde; MDHAR: Monodehydroascorbate reductase; O2-: Superoxide anion; PCA: Principal component analysis; PCD: Programed cell death; PEG-6000: Polyethylene glycol 6000; POD: Peroxidase; Pn: Photosynthetic rate; Pro: Proline; qRT–PCR: Quantitative real-time PCR; RNA-seq: RNA Sequencing; ROS: Reactive oxygen species; RWC: Relative water content; RMP: Relative membrane permeability; SOD: Superoxide dismutase; SW: Saturation weight; Tr: Transpiration rate; ΦPSII: Actual photochemical efficiency; -OH: Hydroxyl radical
研究了干旱、盐度和复合胁迫对甜高粱幼苗叶片活性氧代谢生理和转录组学的影响。结果表明,干旱胁迫对叶片光合作用影响不大,但叶片SOD活性、CAT活性及其相关基因表达均有所升高,O2 -、H2O2和- oh均未过量积累。盐度胁迫下,叶片光合作用受到抑制,O2 -、H2O2和- oh含量显著升高,SOD、POD、CAT活性及其相关基因表达量升高。在联合胁迫下,光合作用受到显著抑制,O2 -、H2O2和- oh含量积累最高,叶片SOD、POD活性及相关基因表达显著升高,CAT显著降低。综上所述,综合胁迫对甜高粱幼苗叶片的氧化损伤高于单独干旱或盐胁迫。复合胁迫下,SOD和POD活性升高,而AsA-GSH循环中CAT活性严重降低,说明幼苗的抗氧化机制没有发挥正常的保护作用,导致植株受到氧化胁迫的严重损害。AsA:抗坏血酸;APX:抗坏血酸过氧化物酶;猫:过氧化氢酶;Chl a:叶绿素a;Chl b:叶绿素b;Ci:胞间CO2浓度;DHAR:脱氢抗坏血酸还原酶;DEGs:差异表达基因;DW:干重;ETR:光合电子传递速率;FW:鲜重;Fv/Fm:原始光能转换效率;GPX:谷胱甘肽过氧化物酶;GR:谷胱甘肽还原酶;Gs:气孔导度;GSH:氧化谷胱甘肽;H2O2:过氧化氢;MDA:丙二醛;MDHAR:单脱氢抗坏血酸还原酶;O2-:超氧阴离子;主成分分析;PCD:程序性细胞死亡;PEG-6000:聚乙二醇6000;豆荚:过氧化物酶;Pn:光合速率;职业:脯氨酸;qRT-PCR:实时定量PCR;RNA-seq: RNA测序;ROS:活性氧;RWC:相对含水量;RMP:相对膜透性;超氧化物歧化酶;SW:饱和重量;Tr:蒸腾速率;ΦPSII:实际光化学效率;-OH:羟基
{"title":"Physiological and transcriptomic analysis of antioxidant mechanisms in sweet sorghum seedling leaves in response to single and combined drought and salinity stress","authors":"Zhiheng Wang, Yuqing Wei","doi":"10.1080/17429145.2022.2146771","DOIUrl":"https://doi.org/10.1080/17429145.2022.2146771","url":null,"abstract":"ABSTRACT The effects of drought, salinity, and combined stress on ROS and ROS metabolic physiology and transcriptomics in sweet sorghum seedling leaves were evaluated. The results showed that drought stress had little effect on photosynthesis, while the SOD activity, CAT activity, and the expression of their related genes were elevated in leaves, but no excessive accumulation of O2 -, H2O2, or -OH was observed. Under salinity stress, photosynthesis was inhibited, the O2 -, H2O2 and -OH contents increased significantly, and the SOD, POD, CAT activities and the expression of their related genes in leaves were elevated. Under combined stress, photosynthesis was significantly inhibited, the highest accumulation of O2 -, H2O2 and -OH contents occurred, and the SOD and POD activities and the expression of related genes in leaves were significantly increased, but the CAT was significantly decreased. These results collectively indicate that oxidative damage to sweet sorghum seedling leaves was higher with combined stress than with either drought or salinity stress alone. Under combined stress the SOD and POD activities were increased, but the CAT activity in the AsA-GSH cycle was severely reduced, demonstrating that antioxidant mechanisms in seedlings did not play a normal protective role, leaving the plants severely damaged by oxidative stress. Abbreviations: AsA: Ascorbic acid; APX: Ascorbate peroxidase; CAT: Catalase; Chl a: Chlorophyll a; Chl b: Chlorophyll b; Ci: Intercellular CO2 concentration; DHAR: Dehydroascorbate reductase; DEGs: Differentially expressed genes; DW: Dry weight; ETR: Photosynthetic electron transport rate; FW: Fresh weight; Fv/Fm: Original light energy conversion efficiency; GPX: Glutathione peroxidase; GR: Glutathione reductase; Gs: Stomatal conductance; GSH: Oxidized glutathione; H2O2: Hydrogen peroxide; MDA: Malondialdehyde; MDHAR: Monodehydroascorbate reductase; O2-: Superoxide anion; PCA: Principal component analysis; PCD: Programed cell death; PEG-6000: Polyethylene glycol 6000; POD: Peroxidase; Pn: Photosynthetic rate; Pro: Proline; qRT–PCR: Quantitative real-time PCR; RNA-seq: RNA Sequencing; ROS: Reactive oxygen species; RWC: Relative water content; RMP: Relative membrane permeability; SOD: Superoxide dismutase; SW: Saturation weight; Tr: Transpiration rate; ΦPSII: Actual photochemical efficiency; -OH: Hydroxyl radical","PeriodicalId":16830,"journal":{"name":"Journal of Plant Interactions","volume":"17 1","pages":"1006 - 1016"},"PeriodicalIF":3.2,"publicationDate":"2022-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45271182","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
期刊
Journal of Plant Interactions
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1