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A new method to improve RF safety of implantable medical devices using inductive coupling at 3.0 T MRI. 一种利用3.0 T MRI感应耦合提高植入式医疗器械射频安全性的新方法。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-08-11 DOI: 10.1007/s10334-023-01109-8
Bu S Park, Joshua W Guag, Hongbae Jeong, Sunder S Rajan, Brent McCright

Objective: To enhance RF safety when implantable medical devices are located within the body coil but outside the imaging region by using a secondary resonator (SR) to reduce electric fields, the corresponding specific absorption rate (SAR), and temperature change during MRI.

Materials and methods: This study was conducted using numerical simulations with an American Society for Testing and Materials (ASTM) phantom and adult human models of Ella and Duke from Virtual Family Models, along with corresponding experimental results of temperature change obtained using the ASTM phantom. The circular SR was designed with an inner diameter of 150 mm and a width of 6 mm. Experimental measurements were carried out using a 3 T Medical Implant Test System (MITS) body coil, electromagnetic (EM) field mapping probes, and an ASTM phantom.

Results: The magnitudes of B1+ (|B1+|) and SAR1g were reduced by 15.2% and 5.85% within the volume of interest (VoI) of an ASTM phantom, when a SR that generates opposing electromagnetic fields was utilized. Likewise, the Δ|B1+| and ΔSAR1g were reduced by up to 56.7% and 57.5% within the VoI of an Ella model containing a copper rod when an opposing SR was used.

Conclusion: A novel method employing the designed SR, which generates opposing magnetic fields to partially shield a sample, has been proposed to mitigate the risk of induced-RF heating at the VoI through numerical simulations and corresponding experiments under various conditions at 3.0 T.

目的:利用二次谐振器(SR)减小磁场、相应的比吸收率(SAR)和MRI过程中的温度变化,提高植入式医疗器械位于人体线圈内而非成像区域时的射频安全性。材料与方法:本研究采用美国材料试验学会(ASTM)模型和虚拟家庭模型中Ella和Duke的成人模型进行数值模拟,并使用ASTM模型获得相应的温度变化实验结果。设计了内径为150mm,宽度为6mm的圆形SR。实验测量使用3t医疗植入物测试系统(MITS)体线圈、电磁(EM)场测绘探头和ASTM模体进行。结果:当使用产生相反电磁场的SR时,B1+ (|B1+|)和SAR1g在ASTM模体感兴趣体积(VoI)内的大小分别降低了15.2%和5.85%。同样,当使用相反的SR时,含有铜棒的Ella模型的VoI内Δ|B1+|和ΔSAR1g减少了56.7%和57.5%。结论:通过数值模拟和相关实验,提出了一种利用所设计的SR产生相反磁场来部分屏蔽样品的新方法,以减轻在3.0 T下各种条件下VoI处的感应射频加热风险。
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引用次数: 0
Automated inversion time selection for black-blood late gadolinium enhancement cardiac imaging in clinical practice. 临床应用黑血晚期钆增强心脏成像的自动反演时间选择。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-06-09 DOI: 10.1007/s10334-023-01101-2
Aurélien Maillot, Soumaya Sridi, Xavier Pineau, Amandine André-Billeau, Stéphanie Hosteins, Jean-David Maes, Géraldine Montier, Marta Nuñez-Garcia, Bruno Quesson, Maxime Sermesant, Hubert Cochet, Matthias Stuber, Aurélien Bustin

Objective: To simplify black-blood late gadolinium enhancement (BL-LGE) cardiac imaging in clinical practice using an image-based algorithm for automated inversion time (TI) selection.

Materials and methods: The algorithm selects from BL-LGE TI scout images, the TI corresponding to the image with the highest number of sub-threshold pixels within a region of interest (ROI) encompassing the blood-pool and myocardium. The threshold value corresponds to the most recurrent pixel intensity of all scout images within the ROI. ROI dimensions were optimized in 40 patients' scans. The algorithm was validated retrospectively (80 patients) versus two experts and tested prospectively (5 patients) on a 1.5 T clinical scanner.

Results: Automated TI selection took ~ 40 ms per dataset (manual: ~ 17 s). Fleiss' kappa coefficient for automated-manual, intra-observer and inter-observer agreements were [Formula: see text]= 0.73, [Formula: see text] = 0.70 and [Formula: see text] = 0.63, respectively. The agreement between the algorithm and any expert was better than the agreement between the two experts or between two selections of one expert.

Discussion: Thanks to its good performance and simplicity of implementation, the proposed algorithm is a good candidate for automated BL-LGE imaging in clinical practice.

目的:利用基于图像的自动反转时间(TI)选择算法,简化临床黑血晚期钆增强(BL-LGE)心脏成像。材料和方法:该算法从BL-LGE TI侦察图像中选择在包括血池和心肌的感兴趣区域(ROI)内亚阈值像素数最高的图像对应的TI。阈值对应于ROI内所有侦察图像中最常出现的像素强度。对40例患者的扫描进行ROI维度优化。该算法经过回顾性验证(80例患者)和两位专家的验证,并在1.5 T临床扫描仪上进行前瞻性测试(5例患者)。结果:每个数据集的自动TI选择时间为~ 40 ms(手动:~ 17 s),自动-手动、观察者内部和观察者之间的Fleiss kappa系数分别为[公式:见文]= 0.73、[公式:见文]= 0.70和[公式:见文]= 0.63。算法与任一专家的一致性优于两位专家的一致性或同一专家的两次选择的一致性。讨论:由于其良好的性能和简单的实现,所提出的算法是临床实践中自动BL-LGE成像的良好候选者。
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引用次数: 0
Dynamic cardiac MRI with high spatiotemporal resolution using accelerated spiral-out and spiral-in/out bSSFP pulse sequences at 1.5 T. 采用1.5 T加速螺旋出和螺旋进/出bSSFP脉冲序列的高时空分辨率动态心脏MRI。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-09-04 DOI: 10.1007/s10334-023-01116-9
Zhixing Wang, Xue Feng, Michael Salerno, Christopher M Kramer, Craig H Meyer

Objective: To develop two spiral-based bSSFP pulse sequences combined with L + S reconstruction for accelerated ungated, free-breathing dynamic cardiac imaging at 1.5 T.

Materials and methods: Tiny golden angle rotated spiral-out and spiral-in/out bSSFP sequences combined with view-sharing (VS), compressed sensing (CS), and low-rank plus sparse (L + S) reconstruction were evaluated and compared via simulation and in vivo dynamic cardiac imaging studies. The proposed methods were then validated against the standard cine, in terms of quantitative image assessment and qualitative quality rating.

Results: The L + S method yielded the least residual artifacts and the best image sharpness among the three methods. Both spiral cine techniques showed clinically diagnostic images (score > 3). Compared to standard cine, there were significant differences in global image quality and edge sharpness for spiral cine techniques, while there was significant difference in image contrast for the spiral-out cine but no significant difference for the spiral-in/out cine. There was good agreement in left ventricular ejection fraction for both the spiral-out cine (- 1.6 [Formula: see text] 3.1%) and spiral-in/out cine (- 1.5 [Formula: see text] 2.8%) against standard cine.

Discussion: Compared to the time-consuming standard cine (~ 5 min) which requires ECG-gating and breath-holds, the proposed spiral bSSFP sequences achieved ungated, free-breathing cardiac movies at a similar spatial (1.5 × 1.5 × 8 mm3) and temporal resolution (36 ms) per slice for whole heart coverage (10-15 slices) within 45 s, suggesting the clinical potential for improved patient comfort or for imaging patients with arrhythmias or who cannot hold their breath.

目的:开发两种基于螺旋的bSSFP脉冲序列联合L + S重建用于1.5 t加速无门、自由呼吸动态心脏成像。材料和方法:通过模拟和体内动态心脏成像研究,评估和比较小黄金角旋转螺旋出和螺旋进/出bSSFP序列联合视图共享(VS)、压缩感知(CS)和低秩加稀疏(L + S)重建。然后,在定量图像评价和定性质量评定方面,针对标准电影验证了所提出的方法。结果:三种方法中,L + S法产生的残余伪影最少,图像清晰度最好。两种螺旋电影技术均显示临床诊断图像(评分> 3)。与标准电影相比,螺旋电影技术在整体图像质量和边缘清晰度方面存在显著差异,螺旋输出电影的图像对比度存在显著差异,而螺旋输入/输出电影的图像对比度无显著差异。在左心室射血分数上,螺旋出片(- 1.6[公式:见文]3.1%)和螺旋入/出片(- 1.5[公式:见文]2.8%)与标准片都有很好的一致性。讨论:与需要心电图门控和屏气的耗时标准电影(约5分钟)相比,所提出的螺旋bSSFP序列在45秒内获得了全心脏覆盖(10-15片)的空间(1.5 × 1.5 × 8 mm3)和时间分辨率(36 ms)的无门控,自由呼吸的心脏电影,这表明了改善患者舒适度或对心律失常或无法屏住呼吸的患者进行成像的临床潜力。
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引用次数: 0
Arterial occlusion duration affects the cuff-induced hyperemic response in skeletal muscle BOLD perfusion imaging as shown in young healthy subjects. 动脉闭塞持续时间影响年轻健康受试者骨骼肌BOLD灌注成像中袖带诱导的充血反应。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-06-17 DOI: 10.1007/s10334-023-01105-y
Jonathan Arvidsson, Stefanie Eriksson, Edvin Johansson, Kerstin Lagerstrand

Objective: Dynamic BOLD MRI with cuff compression, inducing ischemia and post-occlusive hyperemia in skeletal muscle, has been pointed out as a potential diagnostic tool to assess peripheral limb perfusion. The objective was to explore the robustness of this technique and its sensitivity to the occlusion duration.

Materials and methods: BOLD images were acquired at 3 T in 14 healthy volunteers. [Formula: see text]-imaging with 5- and 1.5-min occlusions were acquired and several semi-quantitative BOLD parameters were derived from ROI-based [Formula: see text]-time curves. Differences in parameters from the two different occlusion durations were evaluated in the gastrocnemius and soleus muscles using non-parametrical tests. Intra- and inter-scan repeatability were evaluated with coefficient of variation.

Results: Longer occlusion duration resulted in an increased hyperemic signal effect yielding significantly different values (p < 0.05) in gastrocnemius for all parameters describing the hyperemic response, and in soleus for two of these parameters. Specifically, 5-min occlusion yielded steeper hyperemic upslope in gastrocnemius (41.0%; p < 0.05) and soleus (59.7%; p = 0.03), shorter time to half peak in gastrocnemius (46.9%; p = 0.00008) and soleus (33.5%; p = 0.0003), and shorter time to peak in gastrocnemius (13.5%; p = 0.02). Coefficients of variation were lower than percentage differences that were found significant.

Discussion: Findings show that the occlusion duration indeed influences the hyperemic response and thus should play a part in future methodological developments.

目的:动态BOLD MRI带袖带压缩,引起骨骼肌缺血和闭塞后充血,已被认为是评估周围肢体灌注的潜在诊断工具。目的是探讨该技术的鲁棒性及其对遮挡时间的敏感性。材料与方法:对14名健康志愿者进行3t时的BOLD图像采集。[公式:见文本]获取5和1.5 min闭塞的图像,并根据基于roi的[公式:见文本]时间曲线得出几个半定量的BOLD参数。使用非参数测试评估腓肠肌和比目鱼肌两种不同咬合时间参数的差异。用变异系数评价扫描内和扫描间的重复性。结果:较长的闭塞时间导致充血信号效应增加,产生显著不同的值(p)讨论:研究结果表明,闭塞时间确实影响充血反应,因此应该在未来的方法学发展中发挥作用。
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引用次数: 0
High-field magnetic resonance microscopy of aortic plaques in a mouse model of atherosclerosis. 小鼠动脉粥样硬化模型主动脉斑块的高场磁共振显微镜观察。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-07-08 DOI: 10.1007/s10334-023-01102-1
Rita Castro, Sean Gullette, Courtney Whalen, Floyd J Mattie, Ximing Ge, A Catharine Ross, Thomas Neuberger

Objectives: Pre-clinical models of human atherosclerosis are extensively used; however, traditional histological methods do not allow for a holistic view of vascular lesions. We describe an ex-vivo, high-resolution MRI method that allows the 3 dimensional imaging of the vessel for aortic plaque visualization and quantification.

Materials and methods: Aortas from apolipoprotein-E-deficient (apoE-/-) mice fed an atherogenic diet (group 1) or a control diet (group 2) were subjected to 14 T MR imaging using a 3D gradient echo sequence. The obtained data sets were reconstructed (Matlab), segmented, and analyzed (Avizo). The aortas were further sectioned and subjected to traditional histological analysis (Oil-Red O and hematoxylin staining) for comparison.

Results: A resolution up to 15 × 10x10 μm3 revealed that plaque burden (mm3) was significantly (p < 0.05) higher in group 1 (0.41 ± 0.25, n = 4) than in group 2 (0.01 ± 0.01, n = 3). The achieved resolution provided similar detail on the plaque and the vessel wall morphology compared with histology. Digital image segmentation of the aorta's lumen, plaque, and wall offered three-dimensional visualizations of the entire, intact aortas.

Discussion: 14 T MR microscopy provided histology-like details of pathologically relevant vascular lesions. This work may provide the path research needs to take to enable plaque characterization in clinical applications.

目的:人类动脉粥样硬化临床前模型应用广泛;然而,传统的组织学方法不允许血管病变的整体视图。我们描述了一种离体,高分辨率的MRI方法,允许血管的三维成像主动脉斑块可视化和量化。材料和方法:将载脂蛋白e缺乏(apoE-/-)小鼠的主动脉喂食致动脉粥样硬化饮食(1组)或对照组饮食(2组),使用3D梯度回波序列进行14t磁共振成像。对得到的数据集进行重构(Matlab)、分割和分析(Avizo)。主动脉进一步切片,进行传统组织学分析(油红O和苏木精染色)进行比较。结果:高达15 × 10 × 10 μm3的分辨率显示斑块负担(mm3)显著(p)。讨论:14t磁共振显微镜提供病理相关血管病变的组织学样细节。这项工作可能为临床应用中的斑块表征提供研究所需的途径。
{"title":"High-field magnetic resonance microscopy of aortic plaques in a mouse model of atherosclerosis.","authors":"Rita Castro, Sean Gullette, Courtney Whalen, Floyd J Mattie, Ximing Ge, A Catharine Ross, Thomas Neuberger","doi":"10.1007/s10334-023-01102-1","DOIUrl":"10.1007/s10334-023-01102-1","url":null,"abstract":"<p><strong>Objectives: </strong>Pre-clinical models of human atherosclerosis are extensively used; however, traditional histological methods do not allow for a holistic view of vascular lesions. We describe an ex-vivo, high-resolution MRI method that allows the 3 dimensional imaging of the vessel for aortic plaque visualization and quantification.</p><p><strong>Materials and methods: </strong>Aortas from apolipoprotein-E-deficient (apoE<sup>-/-</sup>) mice fed an atherogenic diet (group 1) or a control diet (group 2) were subjected to 14 T MR imaging using a 3D gradient echo sequence. The obtained data sets were reconstructed (Matlab), segmented, and analyzed (Avizo). The aortas were further sectioned and subjected to traditional histological analysis (Oil-Red O and hematoxylin staining) for comparison.</p><p><strong>Results: </strong>A resolution up to 15 × 10x10 μm<sup>3</sup> revealed that plaque burden (mm<sup>3</sup>) was significantly (p < 0.05) higher in group 1 (0.41 ± 0.25, n = 4) than in group 2 (0.01 ± 0.01, n = 3). The achieved resolution provided similar detail on the plaque and the vessel wall morphology compared with histology. Digital image segmentation of the aorta's lumen, plaque, and wall offered three-dimensional visualizations of the entire, intact aortas.</p><p><strong>Discussion: </strong>14 T MR microscopy provided histology-like details of pathologically relevant vascular lesions. This work may provide the path research needs to take to enable plaque characterization in clinical applications.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667155/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9758838","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Streamlined quantitative BOLD for detecting visual stimulus-induced changes in oxygen extraction fraction in healthy participants: toward clinical application in human glioma. 流线型定量BOLD用于检测健康参与者视觉刺激诱导的氧提取部分变化:在人类胶质瘤中的临床应用
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-08-09 DOI: 10.1007/s10334-023-01110-1
Fatemeh Arzanforoosh, Avery J L Berman, Marion Smits, Esther A H Warnert

Objective: Monitoring brain oxygenation is critical in brain tumors, as low oxygenation influences tumor growth, pathological angiogenesis, and treatment resistance. This study examined the ability of the streamlined quantitative (sq)BOLD MRI technique to detect oxygenation changes in healthy individuals, as well as its potential application in a clinical setting.

Methods: We used the asymmetric spin echo (ASE) technique with FLAIR preparation, along with model-based Bayesian inference to quantify the reversible transverse relaxation rate (R2') and oxygen extraction fraction (OEF) across the brain at baseline and during visual stimulation in eight healthy participants at 3T; and two patients with glioma at rest only.

Results: Comparing sqBOLD-derived parameters between baseline and visual stimulation revealed a decrease in OEF from 0.56 ± 0.09 at baseline to 0.54 ± 0.07 at the activated state (p = 0.04, paired t test) within a functional localizer-defined volume of interest, and a decline in R2' from 6.5 ± 1.3s-1 at baseline to 6.2 ± 1.4s-1 at the activated state (p = 0.006, paired t test) in the visual cortex.

Conclusion: The sqBOLD technique is sensitive enough to detect and quantify changes in oxygenation in the healthy brain and shows potential for integration into clinical settings to provide valuable information on oxygenation in glioma.

目的:监测脑氧合在脑肿瘤治疗中至关重要,因为低氧合会影响肿瘤生长、病理性血管生成和治疗抵抗。本研究考察了流线型定量(sq)BOLD MRI技术检测健康个体氧合变化的能力,以及其在临床环境中的潜在应用。方法:采用FLAIR制备的非对称自旋回波(ASE)技术,结合基于模型的贝叶斯推断,量化8名健康参与者在基线和视觉刺激期间的可逆横向松弛率(R2′)和氧提取分数(OEF)。两名神经胶质瘤患者只能休息。结果:比较基线和视觉刺激之间的sqbold衍生参数显示,在功能定位者定义的兴趣体积内,OEF从基线时的0.56±0.09下降到激活状态时的0.54±0.07 (p = 0.04,配对t检验),视觉皮层的R2从基线时的6.5±1.3s-1下降到激活状态时的6.2±1.4s-1 (p = 0.006,配对t检验)。结论:sqBOLD技术足够灵敏,可以检测和量化健康大脑中的氧合变化,并显示出整合到临床环境中的潜力,为胶质瘤中的氧合提供有价值的信息。
{"title":"Streamlined quantitative BOLD for detecting visual stimulus-induced changes in oxygen extraction fraction in healthy participants: toward clinical application in human glioma.","authors":"Fatemeh Arzanforoosh, Avery J L Berman, Marion Smits, Esther A H Warnert","doi":"10.1007/s10334-023-01110-1","DOIUrl":"10.1007/s10334-023-01110-1","url":null,"abstract":"<p><strong>Objective: </strong>Monitoring brain oxygenation is critical in brain tumors, as low oxygenation influences tumor growth, pathological angiogenesis, and treatment resistance. This study examined the ability of the streamlined quantitative (sq)BOLD MRI technique to detect oxygenation changes in healthy individuals, as well as its potential application in a clinical setting.</p><p><strong>Methods: </strong>We used the asymmetric spin echo (ASE) technique with FLAIR preparation, along with model-based Bayesian inference to quantify the reversible transverse relaxation rate (R<sub>2</sub><sup>'</sup>) and oxygen extraction fraction (OEF) across the brain at baseline and during visual stimulation in eight healthy participants at 3T; and two patients with glioma at rest only.</p><p><strong>Results: </strong>Comparing sqBOLD-derived parameters between baseline and visual stimulation revealed a decrease in OEF from 0.56 ± 0.09 at baseline to 0.54 ± 0.07 at the activated state (p = 0.04, paired t test) within a functional localizer-defined volume of interest, and a decline in R<sub>2</sub><sup>'</sup> from 6.5 ± 1.3s<sup>-1</sup> at baseline to 6.2 ± 1.4s<sup>-1</sup> at the activated state (p = 0.006, paired t test) in the visual cortex.</p><p><strong>Conclusion: </strong>The sqBOLD technique is sensitive enough to detect and quantify changes in oxygenation in the healthy brain and shows potential for integration into clinical settings to provide valuable information on oxygenation in glioma.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667381/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10014652","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The impact of pre-processing and disease characteristics on reproducibility of T2-weighted MRI radiomics features. 预处理和疾病特征对t2加权MRI放射组学特征再现性的影响。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-08-09 DOI: 10.1007/s10334-023-01112-z
Dyah Ekashanti Octorina Dewi, Mohammed R S Sunoqrot, Gabriel Addio Nketiah, Elise Sandsmark, Guro F Giskeødegård, Sverre Langørgen, Helena Bertilsson, Mattijs Elschot, Tone Frost Bathen

Purpose: To evaluate the reproducibility of radiomics features derived via different pre-processing settings from paired T2-weighted imaging (T2WI) prostate lesions acquired within a short interval, to select the setting that yields the highest number of reproducible features, and to evaluate the impact of disease characteristics (i.e., clinical variables) on features reproducibility.

Materials and methods: A dataset of 50 patients imaged using T2WI at 2 consecutive examinations was used. The dataset was pre-processed using 48 different settings. A total of 107 radiomics features were extracted from manual delineations of 74 lesions. The inter-scan reproducibility of each feature was measured using the intra-class correlation coefficient (ICC), with ICC values > 0.75 considered good. Statistical differences were assessed using Mann-Whitney U and Kruskal-Wallis tests.

Results: The pre-processing parameters strongly influenced the reproducibility of radiomics features of T2WI prostate lesions. The setting that yielded the highest number of features (25 features) with high reproducibility was the relative discretization with a fixed bin number of 64, no signal intensity normalization, and outlier filtering by excluding outliers. Disease characteristics did not significantly impact the reproducibility of radiomics features.

Conclusion: The reproducibility of T2WI radiomics features was significantly influenced by pre-processing parameters, but not by disease characteristics. The selected pre-processing setting yielded 25 reproducible features.

目的:评估在短时间内获得的配对T2WI前列腺病变通过不同预处理设置获得的放射组学特征的可重复性,选择可产生最多可重复性特征的设置,并评估疾病特征(即临床变量)对特征可重复性的影响。材料和方法:使用了50例患者连续2次T2WI成像的数据集。使用48种不同的设置对数据集进行预处理。从74个病变的人工圈定中提取了107个放射组学特征。使用类内相关系数(ICC)测量每个特征的扫描间再现性,ICC值> 0.75被认为是良好的。采用Mann-Whitney U检验和Kruskal-Wallis检验评估统计差异。结果:预处理参数对T2WI前列腺病变放射组学特征的再现性有较大影响。产生最高数量特征(25个特征)的高再现性设置是相对离散化,固定bin数为64,不进行信号强度归一化,通过排除异常值进行异常值滤波。疾病特征对放射组学特征的可重复性没有显著影响。结论:T2WI放射组学特征的再现性受预处理参数的显著影响,而不受疾病特征的影响。选定的预处理设置产生了25个可重复的特征。
{"title":"The impact of pre-processing and disease characteristics on reproducibility of T2-weighted MRI radiomics features.","authors":"Dyah Ekashanti Octorina Dewi, Mohammed R S Sunoqrot, Gabriel Addio Nketiah, Elise Sandsmark, Guro F Giskeødegård, Sverre Langørgen, Helena Bertilsson, Mattijs Elschot, Tone Frost Bathen","doi":"10.1007/s10334-023-01112-z","DOIUrl":"10.1007/s10334-023-01112-z","url":null,"abstract":"<p><strong>Purpose: </strong>To evaluate the reproducibility of radiomics features derived via different pre-processing settings from paired T2-weighted imaging (T2WI) prostate lesions acquired within a short interval, to select the setting that yields the highest number of reproducible features, and to evaluate the impact of disease characteristics (i.e., clinical variables) on features reproducibility.</p><p><strong>Materials and methods: </strong>A dataset of 50 patients imaged using T2WI at 2 consecutive examinations was used. The dataset was pre-processed using 48 different settings. A total of 107 radiomics features were extracted from manual delineations of 74 lesions. The inter-scan reproducibility of each feature was measured using the intra-class correlation coefficient (ICC), with ICC values > 0.75 considered good. Statistical differences were assessed using Mann-Whitney U and Kruskal-Wallis tests.</p><p><strong>Results: </strong>The pre-processing parameters strongly influenced the reproducibility of radiomics features of T2WI prostate lesions. The setting that yielded the highest number of features (25 features) with high reproducibility was the relative discretization with a fixed bin number of 64, no signal intensity normalization, and outlier filtering by excluding outliers. Disease characteristics did not significantly impact the reproducibility of radiomics features.</p><p><strong>Conclusion: </strong>The reproducibility of T2WI radiomics features was significantly influenced by pre-processing parameters, but not by disease characteristics. The selected pre-processing setting yielded 25 reproducible features.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667400/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10316884","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Repeatability and reproducibility of apparent exchange rate measurements in yeast cell phantoms using filter-exchange imaging. 使用滤光片交换成像的酵母细胞幻象中表观交换率测量的重复性和再现性。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-07-12 DOI: 10.1007/s10334-023-01107-w
Mathias Schillmaier, Athanasia Kaika, Geoffrey J Topping, Rickmer Braren, Franz Schilling

Objectives: Development of a protocol for validation and quality assurance of filter-exchange imaging (FEXI) pulse sequences with well-defined and reproducible phantoms.

Materials and methods: A FEXI pulse sequence was implemented on a 7 T preclinical MRI scanner. Six experiments in three different test categories were established for sequence validation, demonstration of the reproducibility of phantoms and the measurement of induced changes in the apparent exchange rate (AXR). First, an ice-water phantom was used to investigate the consistency of apparent diffusion coefficient (ADC) measurements with different diffusion filters. Second, yeast cell phantoms were utilized to validate the determination of the AXR in terms of repeatability (same phantom and session), reproducibility (separate but comparable phantoms in different sessions) and directionality of diffusion encodings. Third, the yeast cell phantoms were, furthermore, used to assess potential AXR bias because of altered cell density and temperature. In addition, a treatment experiment with aquaporin inhibitors was performed to evaluate the influence of these compounds on the cell membrane permeability in yeast cells.

Results: FEXI-based ADC measurements of an ice-water phantom were performed for three different filter strengths, showed good agreement with the literature value of 1.099 × 10-3 mm2/s and had a maximum coefficient of variation (CV) of 0.55% within the individual filter strengths. AXR estimation in a single yeast cell phantom and imaging session with five repetitions resulted in an overall mean value of (1.49 ± 0.05) s-1 and a CV of 3.4% between the chosen regions of interest. For three separately prepared phantoms, AXR measurements resulted in a mean value of (1.50 ± 0.04) s-1 and a CV of 2.7% across the three phantoms, demonstrating high reproducibility. Across three orthogonal diffusion directions, a mean value of (1.57 ± 0.03) s-1 with a CV of 1.9% was detected, consistent with isotropy of AXR in yeast cells. Temperature and AXR were linearly correlated (R2 = 0.99) and an activation energy EA of 37.7 kJ/mol was determined by Arrhenius plot. Furthermore, a negative correlation was found between cell density (as determined by the reference ADC/fe) and AXR (R2 = 0.95). The treatment experiment resulted in significantly decreased AXR values at different temperatures in the treated sample compared to the untreated control indicating an inhibiting effect.

Conclusions: Using ice-water and yeast cell-based phantoms, a protocol for the validation of FEXI pulse sequences was established for the assessment of stability, repeatability, reproducibility and directionality. In addition, a strong dependence of AXR on cell density and temperature was shown. As AXR is an emerging novel imaging biomarker,

目的:开发一种具有明确定义和可重复的幻象的滤波交换成像(FEXI)脉冲序列的验证和质量保证方案。材料和方法:FEXI脉冲序列在7 T临床前MRI扫描仪上执行。建立了3个不同测试类别的6个实验,用于序列验证、幻影再现性论证和诱导表观汇率(AXR)变化的测量。首先,利用冰-水模型研究了不同扩散滤波器下表观扩散系数(ADC)测量结果的一致性。其次,利用酵母细胞幻影来验证AXR在重复性(相同的幻影和会话)、再现性(不同会话中分离但可比较的幻影)和扩散编码方向性方面的测定。第三,此外,酵母细胞幻影被用于评估由于细胞密度和温度改变而导致的潜在AXR偏差。此外,还进行了水通道蛋白抑制剂处理实验,以评估这些化合物对酵母细胞细胞膜通透性的影响。结果:在三种不同的滤波器强度下,基于fxi的冰水模体ADC测量结果与文献值1.099 × 10-3 mm2/s吻合良好,并且在各个滤波器强度内的最大变异系数(CV)为0.55%。在单个酵母细胞幻影和5次重复的成像过程中,AXR估计的总体平均值为(1.49±0.05)s-1,所选感兴趣区域之间的CV为3.4%。对于三个单独制备的幻影,AXR测量结果显示,三个幻影的平均值为(1.50±0.04)s-1, CV为2.7%,具有高重复性。在三个正交扩散方向上,检测到的平均值为(1.57±0.03)s-1, CV为1.9%,与酵母细胞中AXR的各向同性一致。温度与AXR呈线性相关(R2 = 0.99),经Arrhenius图测定活化能EA为37.7 kJ/mol。此外,细胞密度(由参考ADC/fe确定)与AXR之间呈负相关(R2 = 0.95)。与未处理的对照相比,处理后的样品在不同温度下的AXR值显著降低,表明有抑制作用。结论:利用冰水和酵母细胞模型,建立了FEXI脉冲序列的验证方案,以评估其稳定性、可重复性、再现性和方向性。此外,AXR对细胞密度和温度有很强的依赖性。由于AXR是一种新兴的新型成像生物标志物,建议的方案将有助于在研究中以及可能跨多个位点进行AXR测量的质量保证。
{"title":"Repeatability and reproducibility of apparent exchange rate measurements in yeast cell phantoms using filter-exchange imaging.","authors":"Mathias Schillmaier, Athanasia Kaika, Geoffrey J Topping, Rickmer Braren, Franz Schilling","doi":"10.1007/s10334-023-01107-w","DOIUrl":"10.1007/s10334-023-01107-w","url":null,"abstract":"<p><strong>Objectives: </strong>Development of a protocol for validation and quality assurance of filter-exchange imaging (FEXI) pulse sequences with well-defined and reproducible phantoms.</p><p><strong>Materials and methods: </strong>A FEXI pulse sequence was implemented on a 7 T preclinical MRI scanner. Six experiments in three different test categories were established for sequence validation, demonstration of the reproducibility of phantoms and the measurement of induced changes in the apparent exchange rate (AXR). First, an ice-water phantom was used to investigate the consistency of apparent diffusion coefficient (ADC) measurements with different diffusion filters. Second, yeast cell phantoms were utilized to validate the determination of the AXR in terms of repeatability (same phantom and session), reproducibility (separate but comparable phantoms in different sessions) and directionality of diffusion encodings. Third, the yeast cell phantoms were, furthermore, used to assess potential AXR bias because of altered cell density and temperature. In addition, a treatment experiment with aquaporin inhibitors was performed to evaluate the influence of these compounds on the cell membrane permeability in yeast cells.</p><p><strong>Results: </strong>FEXI-based ADC measurements of an ice-water phantom were performed for three different filter strengths, showed good agreement with the literature value of 1.099 × 10<sup>-3</sup> mm<sup>2</sup>/s and had a maximum coefficient of variation (CV) of 0.55% within the individual filter strengths. AXR estimation in a single yeast cell phantom and imaging session with five repetitions resulted in an overall mean value of (1.49 ± 0.05) s<sup>-1</sup> and a CV of 3.4% between the chosen regions of interest. For three separately prepared phantoms, AXR measurements resulted in a mean value of (1.50 ± 0.04) s<sup>-1</sup> and a CV of 2.7% across the three phantoms, demonstrating high reproducibility. Across three orthogonal diffusion directions, a mean value of (1.57 ± 0.03) s<sup>-1</sup> with a CV of 1.9% was detected, consistent with isotropy of AXR in yeast cells. Temperature and AXR were linearly correlated (R<sup>2</sup> = 0.99) and an activation energy E<sub>A</sub> of 37.7 kJ/mol was determined by Arrhenius plot. Furthermore, a negative correlation was found between cell density (as determined by the reference ADC/f<sub>e</sub>) and AXR (R<sup>2</sup> = 0.95). The treatment experiment resulted in significantly decreased AXR values at different temperatures in the treated sample compared to the untreated control indicating an inhibiting effect.</p><p><strong>Conclusions: </strong>Using ice-water and yeast cell-based phantoms, a protocol for the validation of FEXI pulse sequences was established for the assessment of stability, repeatability, reproducibility and directionality. In addition, a strong dependence of AXR on cell density and temperature was shown. As AXR is an emerging novel imaging biomarker, ","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667135/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9770605","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A theoretical and experimental investigation on a volume coil with slotted end-rings for rat MRI at 7 T. 大鼠7 T MRI用开槽端环体积线圈的理论与实验研究。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-05-15 DOI: 10.1007/s10334-023-01096-w
Sergio Solis-Najera, Rodrigo Ruiz, Rodrigo Martin, Fabian Vazquez, Oscar Marrufo, Alfredo Odon Rodriguez

Objective: A volume coil with squared slots-end ring was developed to attain improved sensitivity for imaging of rat's brain at 7 T.

Material and methods: The principles of the high cavity resonator for the low-pass case and the law of Biot-Savart were used to derive a theoretical expression of [Formula: see text]. The slotted-end ring resonator showed a theoretical 2.22-fold sensitivity improvement over the standard birdcage coil with similar dimensions. Numerical studies were carried out for the electromagnetic fields and specific absorption rates for our coil and a birdcage coil loaded with a saline-filled spherical phantom and a digital brain of a rat.

Results: An improvement of the signal-to-noise ratio (SNR) can be observed for the slotted volume coil over the birdcage regardless of the load used in the electromagnetic simulations. The specific absorption rate simulations show a decrement for the digital brain and quite similar values with the saline solution phantom. Phantom and rat's brain images were acquired at 7 T to prove the viability of the coil design. The experimental noise figure of our coil design was four times less than the standard birdcage with similar dimensions, which showed a 44.5% increase in experimental SNR.

Discussion: There is remarkable agreement among the theoretical, numerical and experimental sensitivity values, which all demonstrate that the coil performance for MR imaging of small rodents can be improved using slotted end-rings.

目的:研制方形槽端环体积线圈,提高7t大鼠脑成像灵敏度。材料和方法:利用低通情况下的高腔谐振器原理和Biot-Savart定律推导出[公式:见文]的理论表达式。与相似尺寸的标准鸟笼线圈相比,开槽端环谐振器的理论灵敏度提高了2.22倍。我们对我们的线圈和一个装有装满盐水的球形假体和老鼠的数字大脑的鸟笼线圈的电磁场和特定吸收率进行了数值研究。结果:无论电磁模拟中使用的负载如何,鸟笼上的开槽容积线圈都可以提高信噪比。特定吸收率模拟显示,数字大脑的吸收率下降,与生理盐水模型的吸收率非常相似。在7 T时获得幻像和大鼠脑图像,以证明线圈设计的可行性。我们设计的线圈实验噪声系数比同等尺寸的标准鸟笼小4倍,实验信噪比提高44.5%。讨论:在理论,数值和实验灵敏度值之间有显着的一致性,这些值都表明使用开槽端环可以改善小型啮齿动物MR成像线圈的性能。
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引用次数: 0
Quantitative imaging through the production chain: from idea to application. 通过生产链的定量成像:从想法到应用。
IF 2.3 4区 医学 Q2 Medicine Pub Date : 2023-12-01 Epub Date: 2023-11-11 DOI: 10.1007/s10334-023-01131-w
Najat Salameh, Sebastian Weingärtner, Tom Hilbert, Valérie Vilgrain, Matthew D Robson, José P Marques
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引用次数: 0
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Magnetic Resonance Materials in Physics, Biology and Medicine
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