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Theoretical Insights Into the Effects of Water Solvent and Intermolecular Hydrogen Bond on Excited State Intramolecular Proton Transfer (ESIPT) of 2-Butyl-4-Hydroxyisoindoline-1,3-Dione 水溶剂和分子间氢键对2-丁基-4-羟基异吲哚-1,3-二酮激发态分子内质子转移影响的理论认识
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-18 DOI: 10.1002/qua.70132
Feiyang Yin, Zexi Huang, Hua Fang

The fluorophore 2-butyl-4-hydroxyisoindoline-1,3-dione (BHD) has been obtained experimentally (RSC Adv., 2015, 5, 18177–18182). However, the influence of protic solvent and intermolecular hydrogen bond (InterHB) between BHD and solvent has not been considered. On this foundation, we systematically explored the effect of protic water on the ESIPT mechanism of BHD adopting density functional theory (DFT) and time-dependent DFT (TD-DFT). From a series of data, it can be ensured that the intramolecular hydrogen bonds (IntraHBs) and InterHBs in BHD and its hydrogen-bonded complexes (BHDH2O, BHD(H2O)cyc) are enhanced upon photoexcitation. For BHD, BHDH2O and BHD(H2O)cyc, the proton transfer process can only occur in the excited state. The potential barriers of ESIPT in BHD and BHDH2O are 2.6362 and 3.8611 kcal/mol, respectively. Clearly, the extra InterHB that does not involve in the proton transfer reaction hinders the ESIPT process in BHDH2O. For the cyclic hydrogen-bonded complex BHD(H2O)cyc, excited state double proton transfer (ESDPT) process occurs in a concerted but asynchronous protolysis pattern, requiring only conquering a potential barrier of 0.0356 kcal/mol, as shown in the potential energy curve. Compared with BHD, the two InterHBs in BHD(H2O)cyc obviously reduce the potential barrier and effectively accelerate the ESPT process.

通过实验获得了2-丁基-4-羟基异吲哚-1,3-二酮(BHD)荧光基团(RSC Adv., 2015, 5, 18177-18182)。然而,质子溶剂和BHD与溶剂之间的分子间氢键(InterHB)的影响尚未被考虑。在此基础上,采用密度泛函理论(DFT)和时变泛函理论(TD-DFT)系统探讨了质子水对BHD ESIPT机理的影响。从一系列的数据可以确定,BHD及其氢键配合物(BHD (H2O) H2O, BHD (H2O)cyc)中的分子内氢键(IntraHBs)和InterHBs在光激发下得到增强。对于BHD、BHD H2O和BHD (H2O)循环,质子转移过程只能发生在激发态。ESIPT在BHD和BHD - H2O中的势垒分别为2.6362和3.8611 kcal/mol。显然,不参与质子转移反应的额外InterHB阻碍了BHD - H2O中的ESIPT过程。对于环氢键配合物BHD - _ (H2O)cyc,激发态双质子转移(ESDPT)过程以协调但异步的方式发生,只需克服0.0356 kcal/mol的势垒,如势能曲线所示。与BHD相比,BHD (H2O)循环中的两种InterHBs明显降低了势垒,有效加快了ESPT过程。
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引用次数: 0
On the Search of a Modified STO-3G Basis Set Optimized for Molecules 基于分子优化的改进STO-3G基集的搜索
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-12 DOI: 10.1002/qua.70125
Rudraditya Sarkar, Šimon Budzák, Denis Jacquemin

Atomic basis sets play a central role in molecular chemistry and computational studies. While numerous large and specialized basis sets have been developed, the minimal STO-3G basis set continues to be used. It is commonly employed in the testing phase of calculations, for determining magnetic properties of larger systems, and for describing chemical environments in multilayer QM/QM' calculations focused on extended biological or material systems. The original STO-3G basis set was optimized to fit a single atomic Slater-type orbital, with no emphasis on energy or properties. In this study, we explore the possibilities, advantages, and drawbacks of re-optimizing the STO-3G basis set in the following ways: (i) targeting the total energy of different organic molecules rather than atoms during the optimization process; (ii) introducing different basis set “atom types” for the same atom, inspired by force fields; (iii) optimizing the basis set to improve equilibrium geometries and/or electric properties.

原子基集在分子化学和计算研究中起着核心作用。虽然已经开发了许多大型和专门的基组,但仍继续使用最小的STO-3G基组。它通常用于计算的测试阶段,用于确定较大系统的磁性,以及用于描述扩展生物或材料系统的多层QM/QM计算中的化学环境。最初的STO-3G基集被优化为适合单个原子slater型轨道,不强调能量或性质。在本研究中,我们从以下几个方面探讨了STO-3G基集再优化的可能性、优缺点:(1)在优化过程中,以不同有机分子而非原子的总能量为目标;(ii)根据力场的启发,为同一原子引入不同的基集“原子类型”;(iii)优化基组以改善平衡几何形状和/或电性能。
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引用次数: 0
Synthesis, Characterization, DFT Analysis, and Antimicrobial Evaluation of Thiazolo[4,5-d]Pyrimidine and Thiazolo[4,5-b]Pyridine Derivatives 噻唑[4,5-d]嘧啶和噻唑[4,5-b]吡啶衍生物的合成、表征、DFT分析及抗菌评价
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-11 DOI: 10.1002/qua.70127
Abdullah Y. Abdullah Alzahrani, Amira A. Ghoneim, Wael A. Zordok, Wassila Derafa

Heterocyclic compounds containing thiazolo and pyrimidine rings have attracted significant interest due to their diverse biological activities and structural versatility. The fusion of thiazole with pyrimidine or pyridine frameworks enhances their pharmacological potential and electronic stability. This work aimed to synthesize new heterocyclic derivatives based on benzylidene-thiazolidin-4-one scaffolds and evaluate their electronic, structural, and biological characteristics using both experimental and computational approaches. Benzylidene-thiazolidin-4-one derivatives 1 and 2 were condensed with guanidine hydrochloride to afford thiazolo[4,5-d]pyrimidin-5-amine and methyl benzoate 4. Subsequent reactions with malononitrile yielded thiazolo[4,5-d]pyrimidin-5(6H)-thione (5) and thiazolo[4,5-b]pyridine-6-carbonitrile 6. Density Functional Theory (DFT) calculations were performed to predict the molecular geometry, dipole moments, bond angles, bond lengths, and electronic properties. Reactivity and stability were evaluated from the HOMO–LUMO energy gap. Molecular docking studies were conducted to assess binding affinity with antibacterial and antimalarial protein targets. DFT analysis indicated that compound 3 exhibited the highest softness (σ = 16.129 au), whereas compound 6 behaved as a hard compound (σ = 18.519 au). HOMO electron density in compounds 3 and 5 was mainly localized on the NO2 group (98.4–100%), while in compounds 4 and 6, it was delocalized across the dihydrothiazolo and aromatic rings. Excited states of compound (3) were assigned to π–π* transitions (λ = 208.09–223.42 nm) and n–π* transitions (λ = 255.38–324.46 nm). Molecular docking revealed strong ligand–protein interactions, including four conventional hydrogen bonds, confirming high stability and binding affinity toward antibacterial and antimalarial targets. The synthesized thiazolo[4,5-d] and thiazolo[4,5-b] derivatives demonstrated favorable electronic properties and strong protein binding affinities, suggesting their potential as promising scaffolds for antimicrobial and antimalarial drug development.

含噻唑环和嘧啶环的杂环化合物由于其多样的生物活性和结构的通用性而引起了人们的极大兴趣。噻唑与嘧啶或吡啶框架的融合增强了它们的药理学潜力和电子稳定性。本工作旨在合成基于苄基-噻唑烷-4-one支架的新型杂环衍生物,并通过实验和计算方法评价其电子、结构和生物学特性。苄基噻唑烷-4- 1衍生物1和2与盐酸胍缩合得到噻唑[4,5-d]嘧啶-5-胺和苯甲酸甲酯4。随后与丙二腈反应生成噻唑[4,5-d]吡啶-5(6H)-硫酮(5)和噻唑[4,5-b]吡啶-6-碳腈6。密度泛函理论(DFT)计算进行预测分子几何,偶极矩,键角,键长,和电子性质。用HOMO-LUMO能隙评价反应性和稳定性。通过分子对接研究来评估其与抗菌和抗疟蛋白靶点的结合亲和力。DFT分析表明,化合物3的柔软度最高(σ = 16.129 au),而化合物6的硬度最高(σ = 18.519 au)。化合物3和5的HOMO电子密度主要分布在NO2基团上(98.4 ~ 100%),而化合物4和6的HOMO电子密度分布在二氢噻唑环和芳香环上。化合物(3)的激发态分别为π -π *跃迁(λ = 208.09 ~ 223.42 nm)和n -π *跃迁(λ = 255.38 ~ 324.46 nm)。分子对接显示,配体与蛋白质之间有很强的相互作用,包括四个常规氢键,证实了对抗菌和抗疟疾靶点的高稳定性和结合亲和力。合成的噻唑[4,5-d]和噻唑[4,5-b]衍生物表现出良好的电子性质和较强的蛋白质结合亲和力,表明它们有潜力成为抗微生物和抗疟疾药物开发的有前途的支架。
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引用次数: 0
Dynamically Tunable Terahertz Triple Plasmon-Induced Transparency in a Patterned Graphene Metamaterial 图像化石墨烯超材料中动态可调谐太赫兹三等离子体诱导的透明度
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-09 DOI: 10.1002/qua.70126
Boyun Wang, Qunchao Xie, Qiqi Zhan, Yang Liu, Huaqing Yu, Xiang Yan, Chunchao Yu, Tao Wang

In this study, we achieve polarization and temperature-insensitive triple plasmon-induced transparency (triple-PIT) at terahertz frequencies using a novel graphene metamaterial comprising a graphene block, four graphene squares, and four graphene strips. The insensitivity of this structure to changes in the incident light's polarization angle is attributed to its high symmetry. The expressions of nth-order coupled mode theory are derived accurately, and its theoretical predictions closely align with the findings of numerical finite-difference time-domain simulations for a triple-PIT system with n = 4. Our results reveal that two synergistic single-PIT phenomena lead to a distinct and tunable triple-PIT effect in the designed metamaterial. This observation is further validated through field distribution studies. Additionally, given the continuous nature of graphene used in the metamaterial, its Fermi level and carrier mobility are easily and dynamically tunable under an applied voltage bias. Notably, the group index of the designed triple-PIT system varies between 603 and 817 as graphene's Fermi level rises from 0.8 to 1.2 eV. In contrast, the group index ranges between 778 and 1216 as graphene's carrier mobility increases from 2.5 to 4.5 m2/(V s). Moreover, the maximum group index reaches 1216 at 4.5 m2/(V s), demonstrating the potential of the system in slow-light applications. Thus, the proposed patterned graphene metamaterial and its related findings provide valuable insights for advancing optical switches, dynamically tunable modulators, multichannel filters, and high-performance slow-light devices.

在这项研究中,我们使用一种新型石墨烯超材料,包括一个石墨烯块、四个石墨烯正方形和四个石墨烯条,在太赫兹频率下实现了极化和温度不敏感的三重等离子体诱导透明(triple- pit)。这种结构对入射光偏振角的变化不敏感是由于它的高对称性。得到了n阶耦合模理论的精确表达式,其理论预测与n = 4的三坑系统时域有限差分数值模拟结果吻合较好。我们的研究结果表明,在设计的超材料中,两种协同的单pit现象导致了独特的可调三重pit效应。通过现场分布研究进一步验证了这一观察结果。此外,考虑到石墨烯在超材料中的连续特性,它的费米能级和载流子迁移率在施加的电压偏置下很容易动态调节。值得注意的是,当石墨烯的费米能级从0.8 eV上升到1.2 eV时,所设计的三pit系统的群指数在603和817之间变化。相反,当石墨烯的载流子迁移率从2.5增加到4.5 m2/(V s)时,基团指数在778到1216之间。此外,在4.5 m2/(V s)下,最大群指数达到1216,证明了该系统在慢光应用中的潜力。因此,提出的图像化石墨烯超材料及其相关发现为推进光开关、动态可调调制器、多通道滤波器和高性能慢光器件提供了有价值的见解。
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引用次数: 0
Electronic and Optical Properties, and Quantum Capacitance of Twisted III-Nitride AlN, BN, and GaN 扭曲iii -氮化物AlN, BN和GaN的电子光学性质和量子电容
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-11-28 DOI: 10.1002/qua.70124
Lin-Tao Zhu, Xiao-Hong Li, Rui-Zhou Zhang, Hong-Ling Cui

Twist angle between adjacent two-dimensional (2D) materials can provide an exotic degree of freedom and lead to superior properties such as fascinating electronic structure, tunable bandgaps, and excellent carrier transport. The electronic and optical properties, and quantum capacitance of AA1 and AA2 stackings of twisted III-nitride bilayers AlN, BN, and GaN at a 21.79° twist angle are investigated by density functional theory (DFT). Compared with no-twisted systems, the twisted angle drastically reduces the band gaps of bilayer systems. The stacking mode is sensitive to the electronic structures of twisted bilayer AlN, but insensitive to the electronic structures of twisted bilayers BN and GaN. Flat bands of twisted bilayers AlN and GaN are introduced after atomic reconstruction and mainly originate from N-p states, especially for AA2 stackings of twisted bilayers AlN and GaN. Twisted bilayer BN has the strongest absorptions of 16.4% for AA1 stacking and 14.8% for AA2 stacking in the ultraviolet region. Electrical conductivity is insensitive to stacking modes, and twisted bilayer GaN possesses the strongest electrical conductivity. Different stacking modes have little impact on the electrode type of twisted bilayer materials. All systems are cathode materials at the whole voltage. Effective mass and work function are further studied.

相邻二维(2D)材料之间的扭转角可以提供一种奇异的自由度,并导致诸如迷人的电子结构,可调谐的带隙和出色的载流子输运等优越性能。利用密度泛函理论(DFT)研究了扭转角度为21.79°的扭曲iii -氮化物双分子层AlN、BN和GaN的AA1和AA2层的电子光学性质和量子电容。与无扭曲体系相比,扭曲角度大大减小了双层体系的带隙。叠加模式对双扭曲层AlN的电子结构敏感,而对双扭曲层BN和GaN的电子结构不敏感。原子重构后引入了双扭曲层AlN和GaN的平带,主要来源于N-p态,特别是对于双扭曲层AlN和GaN的AA2堆叠。在紫外区,扭曲双层BN对AA1和AA2的吸光率分别为16.4%和14.8%。电导率对堆叠模式不敏感,扭曲双层氮化镓具有最强的电导率。不同的堆叠方式对扭曲双层材料的电极类型影响不大。在整个电压下,所有系统都是正极材料。进一步研究了有效质量和功函数。
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引用次数: 0
Evaluating Degree-Based Topological Indices in QSPR Modeling of Anticancer Drugs Using Linear and Multilinear Regression 利用线性和多元线性回归评价抗癌药物QSPR模型中基于度的拓扑指标
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-11-14 DOI: 10.1002/qua.70123
Bharathi Shettahalli Nagaraje Urs, Srikumar Krishnamurthy, Anand Solomon Kamalakaran, Deepika Togarichetu
<div> <p>Cancer arises from the rapid growth of aberrant cells within the body. A range of treatment options are available, including surgery, radiation, hormone therapy, and more, for managing this perilous condition. Anticancer drugs encompassing alkylates and metabolites are employed in the treatment of this malignant ailment. Numerous studies indicate that the attributes of alkanes, such as their chemical structures, boiling points, melting points, flash points, vapor pressure, molar refraction, enthalpy, pH, and so forth, exhibit correlations with anticancer drugs. In this proposed study, five topological indices VL(G), <span></span><math> <semantics> <mrow> <msqrt> <mrow> <mi>VL</mi> <mrow> <mo>(</mo> <mi>G</mi> <mo>)</mo> </mrow> <mspace></mspace> </mrow> </msqrt> </mrow> <annotation>$$ sqrt{mathrm{VL}left(mathrm{G}right) } $$</annotation> </semantics></math>, [VL(G)]<sup>2</sup>, <span></span><math> <semantics> <mrow> <mfrac> <mn>1</mn> <mrow> <mi>VL</mi> <mrow> <mo>(</mo> <mi>G</mi> <mo>)</mo> </mrow> </mrow> </mfrac> </mrow> <annotation>$$ frac{1}{mathrm{VL}left(mathrm{G}right)} $$</annotation> </semantics></math>, <span></span><math> <semantics> <mrow> <mfrac> <mn>1</mn> <msqrt> <mrow> <mi>VL</mi> <mrow> <mo>(</mo> <mi>G</mi> <mo>)</mo> </mrow> </mrow> </msqrt> </mfrac> </mrow> <annotation>$$ frac{1}{sqrt{mathrm{VL}left(mathrm{G}right)}} $$</annotation> </semantics></math> are discussed to assist researchers in comprehending the properties and reactions of 17 anticancer drugs: Amathaspiramid E, Aminopterin, Aspidostomide E, Carmustine, Caulibugulone E, Convolutamide A, Convolutamine F, Convolutamydine A, Daunorubicin, Deguelin, Melatonin, Minocycline, Perfragilin A, Podophyllotoxin, Pterocellin B, Raloxifene, and Tambjamine K. Furthermore, we delve into the Quantitative Structure–Property Relationship (QSPR) analysis of these five degree-based topological indices using linear and multilinear regression an
癌症是由体内异常细胞的快速生长引起的。有一系列的治疗选择,包括手术、放射、激素治疗等等,来控制这种危险的状况。含有烷基酸盐和代谢物的抗癌药物被用于治疗这种恶性疾病。大量研究表明,烷烃的性质,如化学结构、沸点、熔点、闪点、蒸气压、摩尔折射、焓、pH等,都与抗癌药物有关。在本研究中,五个拓扑指标VL(G), VL(G) $$ sqrt{mathrm{VL}left(mathrm{G}right) } $$, [VL(G)]2,1 VL (G) $$ frac{1}{mathrm{VL}left(mathrm{G}right)} $$,讨论了1 VL (G) $$ frac{1}{sqrt{mathrm{VL}left(mathrm{G}right)}} $$,以帮助研究人员理解17的性质和反应抗癌药物:阿马匹斯匹林E、氨基蝶呤、阿斯匹啶E、卡莫司汀、考利布谷酮E、Convolutamide A、Convolutamine F、Convolutamydine A、柔红霉素、去桂林、褪黑素、米诺环素、Perfragilin A、鬼藻毒素、Pterocellin B、雷洛昔芬和Tambjamine k。此外,我们利用线性和多元线性回归分析了这五个基于度的拓扑指标的定量结构-性质关系(QSPR)分析。我们的研究结果表明,5个指标中有3个与抗癌药物的理化性质有很强的相关性。
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引用次数: 0
Revisiting Boron Cluster Dihydrogen Bonding: Improved Reference Energies and Benchmark of Localized Coupled Cluster and DFT Methods 重述硼团簇二氢键:改进的参考能和局域耦合团簇和DFT方法的基准
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-11-03 DOI: 10.1002/qua.70120
Golokesh Santra

Dihydrogen bonds involving boron clusters have gained significant attention in chemistry, biology, and medicine. The reference interaction energies of diH-norm and diH-linear datasets (Fanfrlík et al., ChemPhysChem 2020, 21, 2599), which include such bonds both in bent and linear configurations, have been re-evaluated at the gold standard. This re-evaluation utilizes explicitly correlated MP2-F12 near the complete basis set limit, CCSD(F12*)/VQZ-F12, and a (T) correction from conventional CCSD(T)/haV{T,Q}Z calculations. Relative to the updated reference data, Fanfrlík's original reference shows very small root mean square deviations, resulting from significant error compensation between the [CCSD-MP2] and (T) high-level corrections. The new reference data were subsequently used to assess the performance of various localized-orbital coupled-cluster methods, such as PNO-LCCSD(T), DLPNO-CCSD(T1), and LNO-CCSD(T), at their respective “Normal”, “Tight”, “vTight”, and “vvTight” accuracy settings. For these methods, gradually increasing the basis set size and tightening the accuracy cutoffs consistently improves their performance. For the dihydrogen bonds in the diH-norm set, two cost-effective and accurate methods—PNO-LCCSD(T)/Tight/haV{T,Q}Z and DLPNO-CCSD(T1)/TightPNO/CPS(6,7)/haV{T,Q}Z—yields RMS errors of just 0.010 and 0.027 kcal·mol−1, respectively. For the diH-linear set, the best-performing low-cost options are LNO-CCSD(T)/vTight/haV{T,Q}Z and PNO-LCCSD(T)/Tight/haV{T,Q}Z, with RMS errors of 0.013 and 0.016 kcal·mol−1, respectively. None of the explicitly correlated localized coupled-cluster methods tested surpass the accuracy of these efficient low-cost methods. Among the more affordable density functional methods, r2SCAN-3c stands out for delivering excellent accuracy at minimal cost. For hybrid and double-hybrid functionals, the incorporation of range separation significantly enhances performance.

含硼团簇的二氢键在化学、生物学和医学领域引起了广泛的关注。diH-norm和diH-linear数据集的参考相互作用能(Fanfrlík等人,ChemPhysChem 2020, 21, 2599),其中包括弯曲和线性配置的这些键,已经在金标准下重新评估。这种重新评估利用了在完全基集极限附近显式相关的MP2-F12, CCSD(F12*)/VQZ-F12,以及传统CCSD(T)/haV{T,Q}Z计算的(T)校正。相对于更新后的参考数据,Fanfrlík的原始参考数据显示出非常小的均方根偏差,这是由于[CCSD-MP2]和(T)高级校正之间存在显著的误差补偿。随后,利用新的参考数据评估了PNO-LCCSD(T)、DLPNO-CCSD(T1)和LNO-CCSD(T)在各自的“Normal”、“Tight”、“vTight”和“vvTight”精度设置下的各种定位轨道耦合簇方法的性能。对于这些方法,逐渐增大基集大小和不断收紧精度截止点可以提高它们的性能。对于二氢规范集中的二氢键,pno - lccsd (T)/Tight/haV{T,Q}Z和DLPNO-CCSD(T1)/TightPNO/CPS(6,7)/haV{T,Q}Z的均方根误差分别为0.010和0.027 kcal·mol−1。对于diH-linear集合,性能最好的低成本方案是LNO-CCSD(T)/vTight/haV{T,Q}Z和PNO-LCCSD(T)/Tight/haV{T,Q}Z, RMS误差分别为0.013和0.016 kcal·mol−1。所测试的明确相关的局部耦合聚类方法都没有超过这些高效低成本方法的准确性。在更实惠的密度函数方法中,r2SCAN-3c以最低的成本提供出色的精度。对于混合动力和双混合动力功能,结合范围分离显着提高性能。
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引用次数: 0
An Iterative Correction of Wavefunction Using a Residual Vector for Efficient Calculations of Ab Initio Energy 基于残差矢量的波函数迭代修正,用于从头算能量的有效计算
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-11-02 DOI: 10.1002/qua.70118
Linping Hu, Yanoar P. Sarwono, Fang He, Yonglong Ding, Muhammad Yusrul Hanna, Rui-Qin Zhang

This work presents an improved version of the residual vector correction (RVC) algorithm, designed to address the eigenproblem involved in electronic structure calculations. Instead of directly diagonalizing the entire Hamiltonian matrix, the proposed algorithm iteratively diagonalizes a 2 × 2 submatrix, focusing only on the relevant molecular orbitals. Molecular orbital energies are iteratively minimized along a residual vector, with the step size determined by diagonalizing the 2 × 2 submatrix. To obtain the subsequent eigenvalues, we employ Hotelling deflation, which constructs the necessary auxiliary Fock matrix. Since the size of the diagonalized matrix does not increase with the molecular system, this algorithm eliminates the cubic scaling dependence of computational efficiency on molecule size seen in direct diagonalization. Compared to the earlier version, the implementation within the Hartree–Fock framework shows that the current version is significantly more practical for the calculation of considerably large molecules. As demonstrated, the RVC method consistently surpasses existing iterative approaches in efficiency while maintaining high accuracy.

这项工作提出了残差矢量校正(RVC)算法的改进版本,旨在解决电子结构计算中涉及的特征问题。该算法不是直接对角化整个哈密顿矩阵,而是迭代对角化一个2 × 2的子矩阵,只关注相关的分子轨道。分子轨道能量沿残差矢量迭代最小化,步长由对角化2 × 2子矩阵确定。为了得到后续的特征值,我们使用了Hotelling通缩,它构造了必要的辅助Fock矩阵。由于对角化矩阵的大小不随分子系统的增加而增加,因此该算法消除了直接对角化中计算效率对分子大小的立方尺度依赖。与早期版本相比,在Hartree-Fock框架内的实现表明,当前版本对于相当大的分子的计算显着更加实用。结果表明,RVC方法在保持较高精度的同时,在效率上始终优于现有的迭代方法。
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引用次数: 0
First-Principles Investigation of P-Doped γ-Graphyne as an Anode Material for Lithium-Ion Batteries 掺p γ-石墨烯作为锂离子电池负极材料的第一性原理研究
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-11-01 DOI: 10.1002/qua.70119
Juan Ren, Shujing Chen, Lanxi Luo, Jingrong Huo

Lithium-ion batteries (LIBs) have dominated the energy storage field due to their high energy density, long cycle life, and environmental friendliness. In this study, we systematically investigated the electrochemical properties of phosphorus (P)-doped γ-graphyne as a promising LIBs anode material using density functional theory calculations. The formation energy and cohesive energy of γ-graphyne at varying doping concentrations are calculated, demonstrating excellent experimental synthesizability of P-doped γ-graphyne. Notably, the P-doped system exhibits enhanced electrical conductivity compared to pristine γ-graphyne. The adsorption energy of a single lithium (Li) atom on P-doped γ-graphyne is determined to be −3.72 eV, significantly higher than those of N-doped, Si-doped, and intrinsic γ-graphyne. Even with increasing Li storage, the Li adsorption energy remains greater than the cohesive energy of bulk lithium, while the average open-circuit voltage falls within the optimal range of 0–1 V, ensuring high operational safety. Remarkably, the theoretical Li storage capacity of P-doped γ-graphyne reaches 1150.68 mAh/g, which is 1.85 times that of pristine γ-graphyne and 3.09 times that of conventional graphite. Furthermore, the diffusion barrier calculations reveal that P-doped γ-graphyne substantially reduces the Li-ion migration energy barrier, indicating favorable lithium diffusion kinetics. In summary, P-doped γ-graphyne demonstrates exceptional advantages in specific capacity, structural stability, electrical conductivity, and Li-ion diffusion kinetics, providing critical theoretical insights and experimental guidance for designing next-generation high-performance LIBs anode materials.

锂离子电池以其能量密度高、循环寿命长、环境友好等优点在储能领域占据主导地位。在本研究中,我们系统地研究了磷(P)掺杂γ-石墨炔作为一种很有前途的锂离子电池阳极材料的电化学性能。计算了不同掺杂浓度下γ-石墨烯的形成能和内聚能,证明了p掺杂γ-石墨烯具有良好的实验合成能力。值得注意的是,与原始的γ-石墨炔相比,p掺杂体系表现出更高的导电性。单个锂原子在p掺杂γ-石墨烯上的吸附能为- 3.72 eV,显著高于n掺杂、si掺杂和本征γ-石墨烯的吸附能。即使增加锂的储存量,锂的吸附能仍然大于大块锂的内聚能,而平均开路电压落在0-1 V的最佳范围内,确保了高的运行安全性。p掺杂的γ-石墨烯的理论锂存储容量达到1150.68 mAh/g,是原始γ-石墨烯的1.85倍,是普通石墨的3.09倍。此外,扩散势垒计算表明,掺p的γ-石墨烯显著降低了锂离子迁移能垒,表明有利的锂离子扩散动力学。综上所述,p掺杂γ-石墨烯在比容量、结构稳定性、电导率和锂离子扩散动力学方面具有卓越的优势,为设计下一代高性能锂离子阳极材料提供了重要的理论见解和实验指导。
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引用次数: 0
Spectroscopic Characterization, DFT Studies, Molecular Docking and Cytotoxic Evaluation of 2-(2-Bromophenyl)-1H-Benzimidazole: A Potent Anti-Breast Cancer Agent 2-(2-溴苯基)- 1h -苯并咪唑:一种有效的抗乳腺癌药物的光谱表征、DFT研究、分子对接和细胞毒性评价
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-11-01 DOI: 10.1002/qua.70121
V. S. Kunjumol, S. Sumathi, N. Karthik, S. Jeyavijayan

The molecular properties of 2-(2-Bromophenyl)-1H-benzimidazole (BPBZ) were calculated using the DFT-Becke-3-Lee-Yang-Parr functional and 6-311++G(d,p) basis set. The assigned vibrational wave numbers, the observed FT-IR and FT-Raman spectra accord fairly well. Frontier molecular orbitals and Mulliken charges were used to examine the energy gap and charge transfer interaction of the molecule. The total, partial density of states (TDOS and PDOS) and overlap population density of states (OPDOS) spectra have been computed. Using natural bond orbital analysis (NBO), the intramolecular stabilization interactions of the molecule have been evaluated. The electrophilic and nucleophilic reactivity sites were examined by the molecular electrostatic potential surface and the Fukui function. We have established whether a chemical is suitable to be a drug by using molecular docking with estrogen sulfotransferase receptor (binding energy of −8.5 kcal/mol) and ADMET prediction. The molecule's cytotoxicity (IC50 = 15.17 μg/mL with MCF-7 breast cancer cell line) and antibacterial properties have been done.

采用DFT-Becke-3-Lee-Yang-Parr泛函和6-311++G(d,p)基集计算了2-(2-溴苯基)- 1h -苯并咪唑(BPBZ)的分子性质。所分配的振动波数、观测到的傅里叶变换红外光谱和傅里叶变换拉曼光谱符合得很好。利用前沿分子轨道和Mulliken电荷来研究分子的能隙和电荷转移相互作用。计算了总态密度、偏态密度(TDOS和PDOS)和重叠态密度(OPDOS)谱。利用自然键轨道分析(NBO)对分子内稳定相互作用进行了评价。通过分子静电势面和福井函数对其亲电性和亲核性进行了表征。我们通过与雌激素硫转移酶受体(结合能为- 8.5 kcal/mol)的分子对接和ADMET预测,确定了一种化学物质是否适合作为药物。研究了该分子对MCF-7乳腺癌细胞株的细胞毒性(IC50 = 15.17 μg/mL)和抗菌性能。
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引用次数: 0
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International Journal of Quantum Chemistry
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