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Dynamics of Hydrated Y3+ Ions in an Aqueous Environment: A Quantum Mechanical Charge Field Molecular Dynamics Simulation Study 水合Y3+离子在水环境中的动力学:量子力学电荷场分子动力学模拟研究
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-30 DOI: 10.1002/qua.70108
Niko Prasetyo

This work presents a quantum mechanical charge field molecular dynamics (QMCF MD) simulation study exploring the structural and dynamic properties of hydrated Y3+ ions in an aqueous solution. The simulation results reveal the formation of two hydration shells over a simulation time of 180 ps. The first hydration shell predominantly consists of eight water molecules, with a lower probability of nine, indicating a flexible hydration structure. A total of 84 successful ligand exchange events were recorded during the simulation. The mean residence times of the water molecules in the first and second hydration shells were 18.0 and 2.27 ps, respectively. The square antiprism geometry was adopted for the octahydrate, whereas the gyroelongated square antiprism geometry was adopted for the nonahydrate. The vibrational stretching frequency of Y3+O bonds was determined to be 352 cm−1, consistent with the experimental values of 384 and 379 cm−1 of hydrated yttrium perchlorate and yttrium nitrate. These findings indicate that the QMCF MD simulations can effectively describe the hydration structure and dynamics of Y3+, providing valuable insights into the behavior of this rare earth ion in aqueous environments and complementing experimental studies of hydrated Y3+.

本文提出了一种量子力学电荷场分子动力学(qmcfmd)模拟研究,探讨了水溶液中水合Y3+离子的结构和动力学性质。模拟结果表明,在180 ps的模拟时间内形成了两个水化壳。第一个水化壳主要由8个水分子组成,9个水分子的概率较低,表明水化结构灵活。模拟过程中共记录了84次成功的配体交换事件。水分子在第一和第二水化壳中的平均停留时间分别为18.0和2.27 ps。八水化合物采用方形反棱镜结构,非水化合物采用陀螺细长方形反棱镜结构。Y3+ - O键的振动拉伸频率为352 cm−1,与水合高氯酸钇和硝酸钇的384 cm−1和379 cm−1的实验值一致。这些发现表明,QMCF MD模拟可以有效地描述Y3+的水化结构和动力学,为了解这种稀土离子在水环境中的行为提供了有价值的见解,并补充了水化Y3+的实验研究。
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引用次数: 0
Exploring Stability, Mechanical, Optoelectronic, and Thermoelectric Characteristics of Halide Double Perovskites Li2YAuX6 (X = Br or I) for Energy Harvesting: A DFT and AIMD Approach 用于能量收集的卤化物双钙钛矿Li2YAuX6 (X = Br or I)的稳定性、机械、光电和热电特性研究:DFT和AIMD方法
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-29 DOI: 10.1002/qua.70103
Noura Dawas Alkhaldi, Ahmad Ayyaz, Shereen M. Al-Shomar, Fekhra Hedhili, Hissah Saedoon Albaqawi, Selma Abdelrahman, Nwuyer A. Al-Shammari, Q. Mahmood

Herein, the structural features, mechanical stability, electronic response, optical properties, and thermoelectric aspects of Li2YAuX6 (X = Br or I) are examined via first-principles computations. The Born-Huang criterion, formation energy, and tolerance factor ensure the mechanical, thermal, and structural stabilities. Several elastic characteristics have been obtained, including elastic constants, moduli, ductility, wave velocities, Debye temperature, and melting points. The data on elastic features indicate that Li2YAuBr6 and Li2YAuI6 possess ductility and sufficient flexibility to be employed in flexible solar devices. Moreover, the estimated band gap values for Li2YAuBr6 and Li2YAuI6 are 2.65 and 2.15 eV, respectively. The obtained band structures demonstrate the semiconducting nature with indirect band gaps. The density of states has been ascertained to determine the contributing states in electronic transitions. The optical features have been calculated to evaluate the response of both materials to incoming light photons. Li2YAuBr6 is effective at photon absorption over the ultraviolet (UV) spectrum, whereas Li2YAuI6 demonstrates visible and UV light absorption, making them suitable for photovoltaics. Thermoelectric aspects have been calculated to analyze the performance of materials for deployment in wasted heat conversion technologies. The minimum heat conduction and increased power factor lead to considerable ZT values of 0.79 and 0.81. These findings suggest that these materials have great promise for application in photovoltaic and thermoelectric systems.

本文通过第一性原理计算对Li2YAuX6 (X = Br或I)的结构特征、机械稳定性、电子响应、光学性质和热电特性进行了研究。Born-Huang准则、地层能量和容差系数确保了机械、热和结构的稳定性。得到了几种弹性特性,包括弹性常数、模量、延性、波速、德拜温度和熔点。弹性特性数据表明,Li2YAuBr6和Li2YAuI6具有延展性和足够的柔韧性,可用于柔性太阳能器件。Li2YAuBr6和Li2YAuI6的带隙估计值分别为2.65和2.15 eV。所得的能带结构具有间接带隙的半导体性质。确定了态的密度,以确定电子跃迁中的贡献态。计算了这两种材料的光学特性,以评估它们对入射光子的响应。Li2YAuBr6在紫外(UV)光谱上有效吸收光子,而Li2YAuI6则表现出可见光和紫外光吸收,使其适合光伏电池。对热电方面进行了计算,分析了废热转换技术中部署材料的性能。最小的热传导和增大的功率因数导致相当大的ZT值为0.79和0.81。这些发现表明这些材料在光伏和热电系统中具有很大的应用前景。
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引用次数: 0
Single Water Molecules Release Hydrogen on the Surface of Ga5 and Ga4Be Clusters 单个水分子在Ga5和Ga4Be簇表面释放氢
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-29 DOI: 10.1002/qua.70097
Kai Diao, Wenlei Cao, Yi He, Xuxu Shen, Jiang Fan, Shunping Shi, Deliang Chen

This study addresses the global rise in energy demand and the environmental challenges posed by fossil fuel usage, such as greenhouse gas emissions and pollution. It explores the potential of cluster catalysts, specifically gallium (Ga) and beryllium (Be) clusters, for splitting water molecules to generate hydrogen. Using density functional theory (DFT), we conducted an in-depth analysis of the interactions between Ga5 and Ga4Be clusters with water molecules and the mechanisms of hydrogen production. The results indicate that while Be doping slightly reduces the binding energy and structural stability of the clusters, it significantly decreases the band gap, promoting electron transfer and enhancing catalytic activity. Adsorption energy calculations reveal that Be doping notably increases the adsorption strength of water molecules on the cluster surface, particularly through the formation of Be-O chemical bonds. This enhanced adsorption effect facilitates the breaking of O-H bonds in water molecules, significantly lowering the reaction energy barrier and transforming the process from an energy-driven to a spontaneous exothermic reaction. Furthermore, the resulting hydrogen molecules are adsorbed on the cluster surface through van der Waals forces, making them easy to desorb. This indicates that the catalytic system is highly efficient in hydrogen production and holds strong potential for practical applications.

本研究解决了全球能源需求的增长以及化石燃料使用带来的环境挑战,如温室气体排放和污染。它探索了团簇催化剂的潜力,特别是镓(Ga)和铍(Be)团簇,用于分裂水分子产生氢。利用密度泛函理论(DFT)深入分析了Ga5和Ga4Be簇与水分子的相互作用及其产氢机理。结果表明,Be掺杂虽然会轻微降低团簇的结合能和结构稳定性,但会显著减小带隙,促进电子转移,增强催化活性。吸附能计算表明,Be掺杂显著增加了水分子在簇表面的吸附强度,特别是通过形成Be- o化学键。这种增强的吸附效应促进了水分子中O-H键的断裂,显著降低了反应能垒,使反应过程从能量驱动转变为自发放热反应。此外,产生的氢分子通过范德华力吸附在团簇表面,使它们易于解吸。这表明该催化体系制氢效率高,具有较强的实际应用潜力。
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引用次数: 0
A New Green's Function Formalism for Kinetic Energy Density Functional for Atomic and Molecular System: Emergence of N-Dependence Using Model Potentials 原子和分子系统动能密度泛函的一种新的格林函数形式:利用模型势的n依赖性的出现
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-28 DOI: 10.1002/qua.70098
Priya, Mainak Sadhukhan

An accurate expression of the kinetic energy density of an electronic distribution in terms of the single-particle reduced density matrix for atomic and molecular systems is a long-standing problem in electron structure theory. Existing kinetic energy density functionals are generally expressed as modifications over kinetic energy of homogeneous electron gas and/or von Weizsäcker kinetic energy. A large class of these functionals also requires empirical parametrizations to make accurate predictions of the kinetic energy for atomic and molecular systems restricting their transferability. Moreover, the correct kinetic energy density which produces accurate local properties such as atomic shell structure is still an unsolved problem. In this work, we have developed an exact methodology that can be used to derive the kinetic energy of an electronic system of arbitrary spin multiplicity. One of the attractive features of this present analytical formalism is the possibility of systematic improvement of the kinetic energy by virtue of a novel perturbation series. Applying this methodology to simple model systems such as one-dimensional quantum harmonic oscillator and homogeneous electron gas produces a qualitatively correct N$$ N $$-dependence of kinetic energy as a result. A one-to-one correspondence between our formalism to the traditional Green's function formalism is also demonstrated.

用原子和分子系统的单粒子约简密度矩阵精确地表示电子分布的动能密度是电子结构理论中一个长期存在的问题。现有的动能密度泛函一般表示为对均相电子气体动能和/或von Weizsäcker动能的修正。大量的这些泛函也需要经验参数化来对原子和分子系统的动能做出准确的预测,从而限制它们的可转移性。此外,正确的动能密度产生准确的局部性质,如原子壳结构,仍然是一个未解决的问题。在这项工作中,我们开发了一种精确的方法,可以用来推导任意自旋多重性的电子系统的动能。目前这种分析形式的一个吸引人的特点是,利用一种新的摄动级数,有可能系统地改进动能。将这种方法应用于简单的模型系统,如一维量子谐振子和均质电子气体,结果产生定性正确的N $$ N $$依赖于动能。我们的形式主义与传统的格林函数形式主义是一一对应的。
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引用次数: 0
Refractory Metals Enhanced the Mechanical and Thermodynamic Properties of B-Rich Region YB12 Borides 难熔金属增强了富b区YB12硼化物的力学和热力学性能
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-26 DOI: 10.1002/qua.70104
Yong Pan, Haibo Wang, Jin Zhang

To improve the overall properties of YB12 ceramics, the influence of refractory metals on the structural stability, Vicker hardness, elastic properties, elastic anisotropy, and thermodynamic properties of YB12 boride is studied using first-principles calculations. The result shows that the structural stability of TM-doped YB12 becomes better with decreasing the valence electronic density for these refractory metals. In particular, the calculated Vickers hardness of Re-doped YB12 is 40.2 GPa, which is higher than that of YB12 (36.21 GPa) and the other TM-doped YB12. The high hardness of TM-doped YB12 is demonstrated by the change of Poisson ratio (δ) and B/G ratio. Naturally, the high hardness of Re-doped YB12 is that the refractory metal enhances the localized hybridization between B and B atoms in B12 cage, which is demonstrated by the change of the B–B covalent bond. In addition, YB12 and TM-doped YB12 borides exhibit elastic isotropy. Finally, it is found that these refractory metals (except for Re) enhance the melting point of YB12.

为了提高YB12陶瓷的整体性能,采用第一性原理计算方法研究了难熔金属对YB12硼化物的结构稳定性、维氏硬度、弹性性能、弹性各向异性和热力学性能的影响。结果表明,随着这些难熔金属的价电子密度的降低,掺杂tm的YB12的结构稳定性变得更好。其中,重掺杂YB12的维氏硬度计算值为40.2 GPa,高于YB12 (36.21 GPa)和其他tm掺杂YB12。通过泊松比(δ)和B/G比的变化可以看出掺tm的YB12具有较高的硬度。自然,重掺杂YB12的高硬度是由于难熔金属增强了B12笼中B和B原子之间的局域杂化,这可以通过B - B共价键的变化来证明。此外,YB12和tm掺杂的YB12硼化物均表现出弹性各向同性。最后,发现除Re外,这些难熔金属均提高了YB12的熔点。
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引用次数: 0
A Cross-Platform Graphical User Interface Using Web Technologies: Simplifying the Setup for PyBEST Calculations 使用Web技术的跨平台图形用户界面:简化PyBEST计算的设置
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-22 DOI: 10.1002/qua.70095
Lena Szczuczko, Katharina Boguslawski

We present how to use web technologies to generate a cross-platform GUI. Specifically, we use Electron to build a cross-platform desktop application with JavaScript, HTML, and CSS for the PyBEST quantum chemistry package. The interface offers easy access to PyBEST's methods, including Hartree-Fock (HF), Second-order Møller-Plesset perturbation (MP2), pair Coupled Cluster Doubles (pCCD), various Coupled Cluster (CC) ansätze, and Equation of Motion (EOM) approaches. Key features include molecular geometry input, Hamiltonian configuration, and method-specific settings through a tab-based interface. The GUI simplifies input generation and provides built-in validation to prevent common user errors. This development significantly reduces the learning curve for quantum chemistry software, enabling researchers to focus on scientific research rather than technical setup.

我们介绍了如何使用web技术来生成跨平台GUI。具体来说,我们使用Electron用JavaScript、HTML和CSS为PyBEST量子化学包构建一个跨平台的桌面应用程序。该界面提供了对PyBEST方法的轻松访问,包括harree - fock (HF),二阶Møller-Plesset摄动(MP2),成对耦合簇double (pCCD),各种耦合簇(CC) ansätze和运动方程(EOM)方法。主要功能包括分子几何输入、哈密顿配置和通过基于选项卡的界面进行的方法特定设置。GUI简化了输入生成,并提供内置验证以防止常见的用户错误。这一发展大大减少了量子化学软件的学习曲线,使研究人员能够专注于科学研究而不是技术设置。
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引用次数: 0
Exponential Harmonic Index and Its Applications in Structure Property Modeling 指数调和指数及其在结构特性建模中的应用
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-22 DOI: 10.1002/qua.70099
Kinkar Chandra Das, Manar Alharbi, Jayanta Bera

Topological indices, invariant under symmetry transformations that preserve a graph's connectivity, are fundamental tools in mathematical chemistry. By capturing intrinsic symmetries and connectivity patterns, these indices provide insightful analyses of molecular stability, reactivity, and other fundamental properties, making them indispensable in cheminformatics and theoretical chemistry. Among these, the harmonic index (H$$ H $$) is important in both chemistry and mathematics. It is a modification of the Randić index, widely recognized as a highly effective invariant in investigations of structure–property relationships. The H$$ H $$ index of a graph G$$ G $$ is formulated as

H=H(G)=vivjE(G)2
拓扑指标在对称变换下不变,保持图的连通性,是数学化学的基本工具。通过捕捉内在的对称性和连通性模式,这些指数提供了分子稳定性、反应性和其他基本性质的深刻分析,使它们在化学信息学和理论化学中不可或缺。其中,谐波指数(H $$ H $$)在化学和数学中都很重要。它是对randiski指数的修正,在结构-性质关系的研究中被广泛认为是一个非常有效的不变量。图G $$ G $$的索引H $$ H $$表示为H = H (G) =∑viv j∈E (G)2d +D j $$ H=H(G)=sum limits_{v_i{v}_jin E(G)}frac{2}{d_i+{d}_j} $$其中DJ $$ {d}_j $$表示顶点v J的度数$$ {v}_j $$。近年来,各种基于指数顶点度的拓扑指数被报道。 本文将指数调和指数(E H $$ EH $$)定义为:eh = eh (g) =∑V I Vj∈E (G) E2d I+ d + j$$ EH= EH(G)=sum limits_{v_ikern0.3em {v}_jin E(G)}kern0.3em {e}^{frac{2}{d_i+{d}_j}} $$指数调和指数(E H $$ EH $$)在这里从化学和数学的角度进行了研究。我们通过定量结构-性质关系(QSPR)分析来检验eh $$ EH $$指数预测各种物理化学性质的能力。此外,我们描述了关于eh$$ EH $$的极值树。此外,eh$$ EH $$的极大树与给定的最大度有关。
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引用次数: 0
Influence of Ca2+ and Mg2+ Ions on the Surface Properties and Reagent Adsorption of Hemimorphite (Zn4[Si2O7](OH)2·H2O): DFT and MD Study Ca2+和Mg2+离子对半亚铁(Zn4[Si2O7](OH)2·H2O)表面性能和试剂吸附的影响:DFT和MD研究
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-21 DOI: 10.1002/qua.70100
Zheng Li, Zhiqiang Wu, Ye Chen

Hemimorphite (Zn4[Si2O7](OH)2·H2O) is one of the sources of zinc metal, which is commonly recovered through flotation. The presence of Ca2+ and Mg2+ ions could inevitably impact the flotation process, yet the mechanism remains unclear. In this paper, the influence of the adsorption of [Ca(H2O)6]2+ and [Mg(H2O)6]2+ on the surface properties and reagent interactions of hemimorphite was investigated using density functional theory (DFT) calculations and molecular dynamics (MD) simulations. The results indicate that [Ca(H2O)6]2+ is chemically adsorbed through Ca-O bonding under both acidic and alkaline conditions, while [Mg(H2O)6]2+ is physically adsorbed through hydrogen bonding under acidic conditions but chemically adsorbed under alkaline conditions. Based on the work function results, [Ca(H2O)6]2+ enhances surface stability under acidic conditions, depressing sodium oleate adsorption, whereas [Mg(H2O)6]2+ has minimal impact. Under alkaline conditions, [Mg(H2O)6]2+ is more effective than [Ca(H2O)6]2+ in promoting sodium oleate adsorption. Additionally, mean square displacement results reveal that [Ca(H2O)6]2+ increases surface hydrophobicity under both acidic and alkaline conditions. However, [Mg(H2O)6]2+ decreases surface hydrophobicity under acidic conditions, while the opposite occurs under alkaline conditions. These findings elucidate the differences in mechanisms by which Ca2+ and Mg2+ ions influence the direct flotation of hemimorphite, providing a microscopic perspective for the direct flotation of hemimorphite.

半铁非晶(Zn4[Si2O7](OH)2·H2O)是金属锌的主要来源之一,一般采用浮选法回收。Ca2+和Mg2+离子的存在不可避免地会影响浮选过程,但其机制尚不清楚。本文采用密度泛函理论(DFT)计算和分子动力学(MD)模拟,研究了[Ca(H2O)6]2+和[Mg(H2O)6]2+的吸附对半亚铁表面性质和试剂相互作用的影响。结果表明:[Ca(H2O)6]2+在酸性和碱性条件下均通过Ca- o键进行化学吸附;[Mg(H2O)6]2+在酸性条件下通过氢键进行物理吸附,在碱性条件下进行化学吸附。根据功函数结果,[Ca(H2O)6]2+在酸性条件下增强了表面稳定性,抑制了油酸钠的吸附,而[Mg(H2O)6]2+的影响最小。在碱性条件下,[Mg(H2O)6]2+对油酸钠的吸附效果优于[Ca(H2O)6]2+。此外,均方置换结果表明,[Ca(H2O)6]2+在酸性和碱性条件下均能提高表面疏水性。[Mg(H2O)6]2+在酸性条件下降低了表面疏水性,而在碱性条件下则相反。这些发现阐明了Ca2+和Mg2+离子影响半亚铁正浮选的机制差异,为半亚铁正浮选提供了微观视角。
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引用次数: 0
Quantum-Mechanical Definition of the Classical Scalar Potential in Schrödinger-Pauli and Schrödinger Theory Schrödinger-Pauli和Schrödinger理论中经典标量势的量子力学定义
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-18 DOI: 10.1002/qua.70096
Viraht Sahni

According to the Bohr correspondence principle, the external temporal scalar potential in the classical equation of motion is replicated in quantum theory as a multiplicative operator. An equivalent quantum-mechanical definition of the scalar potential in Schrödinger-Pauli/Schrödinger theory is provided. The potential is a known universal functional of the wave function. At each instant of time, it is the work done in a conservative “classical” field representative of internal properties of the system: Pauli and Coulomb correlations, kinetic effects, the density, the Lorentz force, an internal magnetic component, and the current density response. The Hamiltonians are thus rewritten in a new physical manner indicative of these properties. An application to the triplet 23S$$ {2}^3S $$ state of a 2-electron semiconductor quantum dot in a magnetic field is provided. The significance of the definition to the Hohenberg-Kohn theorem, and its relationship to Quantum and Kohn-Sham density functional theory, is discussed.

根据玻尔对应原理,经典运动方程中的外部时间标量势在量子理论中被复制为一个乘法算子。给出了Schrödinger-Pauli/Schrödinger理论中标量势的等效量子力学定义。势是已知的波函数的泛函。在每一个瞬间,它是在一个保守的“经典”场中完成的功,代表了系统的内部特性:泡利和库仑关联、动力学效应、密度、洛伦兹力、内部磁分量和电流密度响应。因此,哈密顿量被改写为一种新的物理方式,表明了这些性质。提供了一种在磁场中二电子半导体量子点的三重态23s $$ {2}^3S $$状态的应用。讨论了该定义对Hohenberg-Kohn定理的意义,以及它与量子和Kohn-Sham密度泛函理论的关系。
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引用次数: 0
From Perturbation Theory to Model Potential for Alkali Rare Gas Molecules 从微扰理论到碱稀有气体分子模型电位
IF 2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-08-15 DOI: 10.1002/qua.70066
E. Hochard, J. Douady, L. Dontot, B. Gervais

We present a derivation of an ab initio model potential (AIMP) based on the Van Vleck Perturbation theory. We applied the derivation to the specific case of a molecular system made of one alkali atom interacting with rare gas atoms. Our approach provides a formal background for the empirical potential often used to study this kind of molecular system and allows us to discuss their intrinsic limitations and some possible improvements. In particular, the use of AIMP, which keeps the nodal structure of the orbitals, allows us to take into account accurately the spin-orbit relativistic correction. Its application to alkali-rare gas diatomic molecules allows us to reproduce rather well the known experimental results and the best ab initio calculations at a lower computational cost.

我们提出了一个基于Van Vleck微扰理论的从头算模型势(AIMP)的推导。我们将推导应用于一个碱原子与稀有气体原子相互作用的分子体系的具体情况。我们的方法为经常用于研究这类分子系统的经验势提供了一个正式的背景,并允许我们讨论它们的内在局限性和一些可能的改进。特别是,AIMP的使用,它保持了轨道的节点结构,使我们能够准确地考虑自旋轨道的相对论性修正。它在碱稀有气体双原子分子上的应用使我们能够以较低的计算成本较好地再现已知的实验结果和最佳从头计算。
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引用次数: 0
期刊
International Journal of Quantum Chemistry
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