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Substrate promiscuity catalyzed by an O-glycosyltransferase MrOGT2 from Metarhizium robertsii. 罗伯特绿僵菌o -糖基转移酶MrOGT2催化底物混杂。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-03-24 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2478073
Yihan Ma, Jixia Ren, Wen-Bing Yin, Xiaoqing Liu, Wei Li

Glycosides tremendously extend the wide spectrum of biological activities of flavonoids and phenolics, which are catalysed by the glycosyltransferases (GTs) in diverse plants, bacteria, and fungi. However, the glycosyltransferases identified from fungi are still limited. Herein, one novel O-glycosyltransferase of MrOGT2 from the entomopathogenic fungus Metarhizium robertsii was presented. MrOGT2 exhibited typical substrate promiscuity characteristics towards four uridine diphosphate (UDP) sugar donors and 17 sugar receptors including flavonols, flavanones, flavones, isoflavones, and phenolics five types of compounds. Molecular docking and site-directed mutagenesis revealed the key substrate binding sites in the binding pocket and possible conservative catalytic mechanism of the O-glycosyltransferase MrOGT2. Our research provides an advance in the knowledge of glycosyltransferase in fungi and contributes the application potential for the efficient biocatalyst of O-glycosylation to both agricultural and pharmaceutical industries.

糖苷极大地扩展了黄酮类和酚类化合物的生物活性,这些活性是由糖基转移酶(GTs)在多种植物、细菌和真菌中催化的。然而,从真菌中鉴定的糖基转移酶仍然有限。本文报道了一种来自罗伯特绿僵菌(Metarhizium robertsii)的新型o -糖基转移酶。MrOGT2对四种二磷酸尿苷(UDP)糖供体和17种糖受体(黄酮醇、黄酮、黄酮、异黄酮和酚类化合物)表现出典型的底物混杂特性。分子对接和定点突变揭示了o -糖基转移酶MrOGT2在结合口袋中的关键底物结合位点和可能的保守催化机制。我们的研究为真菌糖基转移酶的研究提供了新的进展,并为o -糖基化的高效生物催化剂在农业和制药行业的应用提供了潜力。
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引用次数: 0
Functionalization of cationic porphyrins with peripheral platinum(II) complexes to optimize photodynamic therapy against Candida-associated infections: a focus on denture stomatitis and burn wounds. 阳离子卟啉与外周铂(II)配合物功能化以优化抗念珠菌相关感染的光动力疗法:对假牙口炎和烧伤创面的关注。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-03-11 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2468756
Maíra Terra Garcia, Lara Luise Castro Pedroso, Paulo Henrique Fonseca Do Carmo, Luciana Andrade Nascimento da Silva, Thainá Lopes Bueno, Vinicius Gabriel Ramos Dos Santos, Amanda Siqueira Fraga, Patrícia Michelle Nagai de Lima, Newton Soares da Silva, Lucas Ramos de Paula, Luciane Dias de Oliveira, Bernardo Almeida Iglesias, Juliana Campos Junqueira

Candida spp. are opportunistic pathogens associated with mucosal and cutaneous infections. Its increased resistance to antifungals has instigated the development of adjunct treatments, such as antimicrobial photodynamic therapy (aPDT). This study evaluated the antifungal effects of aPDT mediated by two tetra-cationic porphyrins with peripheral platinum(II) complexes (3-Pt and 4-Pt). A thorough investigation was performed using in vitro and in vivo assays to determine their antifungal activity on Candida albicans and toxicity in human cells. Next, specific models were employed to search for understanding of the action of aPDT on Candida-associated infections. As a result, a MIC value of 16 μmol/L was found for both porphyrins, with low toxicity to keratinocytes even in higher concentrations. Planktonic cultures of C. albicans treated by aPDT with 3-Pt achieved complete inhibition in 40 s, while 4-Pt reduced 1.3 Log10 (CFU) within 80 s. These effects were also extended to C. albicans biofilms, in which 3-Pt and 4-Pt reduced 4 and 0.8 Log10 (CFU), respectively. The mechanisms of action of 3-Pt were related to hyphae inhibition, increased ROS production, and cell wall damage. Finally, 3-Pt showed efficacy against denture stomatitis biofilms in a microcosm model and burn wounds in Galleria mellonella, indicating its potential for treating Candida-associated infections.

念珠菌属是与粘膜和皮肤感染有关的机会致病菌。它对抗真菌药物的抗性增加,促使了辅助治疗的发展,如抗菌光动力治疗(aPDT)。本研究评估了两种具有外周铂(II)配合物(3-Pt和4-Pt)的四阳离子卟啉介导的aPDT的抗真菌作用。通过体外和体内实验进行了彻底的研究,以确定它们对白色念珠菌的抗真菌活性和对人体细胞的毒性。接下来,采用特定模型来了解aPDT对念珠菌相关感染的作用。结果表明,两种卟啉的MIC值均为16 μmol/L,即使在较高浓度下对角质形成细胞的毒性也较低。aPDT加3-Pt处理浮游培养的白色念珠菌在40 s内达到完全抑制,而4-Pt在80 s内降低了1.3 Log10 (CFU)。这些效应也扩展到白色念珠菌生物膜,3-Pt和4- pt分别降低4和0.8 Log10 (CFU)。3-Pt的作用机制与菌丝抑制、ROS生成增加和细胞壁损伤有关。最后,3-Pt在微观模型中对假牙口炎生物膜和mellonella烧伤创面有效,表明其治疗念珠菌相关感染的潜力。
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引用次数: 0
Application of a One-Step method for rapid detection of nucleic acids from fungi. 一步法在真菌核酸快速检测中的应用。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-03-10 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2471979
Jingye Yuan, Fengchao Qiao, Weijie Chang, Yujie Yang, Linhao Song, Xiao-Lan Liu, Wen-Xia Tian, Jianle Ren, Xiao Liu

PCR-based techniques play a crucial role in genotyping and genetic screening in fungal biology. Rapid access to nucleic acids for these reactions can significantly improve the efficiency of fungal analysis, especially when multiple samples need to be tested. In this study, we introduced a simple and rapid method for detecting small amounts of fungal DNA or RNA, named the One-Step method, and confirmed its applicability across various experimental scenarios for fungal detection. The method involves scraping a small quantity of spores or mycelium into sterile water, followed by heat shock, vortexing, and centrifugation to obtain a supernatant that serves as a template for the PCR reaction. Notably, nucleic acids were successfully extracted using the One-Step method from four different genera of fungi-Neurospora crassa, Aspergillus fumigatus, Fusarium oxysporum, and Schizosaccharomyces pombe, as well as from two mycovirus-containing strains, yielding reliable results in PCR identification. However, the nucleic acids of Cryptococcus neoformans were not successfully extracted using the One-Step method, possibly due to the challenge of cleaving its polysaccharide capsule. Taken together, the One-Step method significantly reduces nucleic acids extraction time while enhancing strain screening efficiency in four different fungi, indicating a broad applicability in fungal biology.

pcr技术在真菌生物学的基因分型和遗传筛选中起着至关重要的作用。快速获取这些反应的核酸可以显著提高真菌分析的效率,特别是当需要测试多个样品时。在本研究中,我们介绍了一种简单快速的检测少量真菌DNA或RNA的方法,命名为One-Step法,并证实了其在各种实验场景下对真菌检测的适用性。该方法包括将少量孢子或菌丝体刮入无菌水中,然后进行热休克、涡旋和离心,以获得作为PCR反应模板的上清。值得注意的是,采用“一步法”成功地从四个不同属的真菌——粗神经孢子菌、烟曲霉、尖孢镰刀菌和pombe裂糖菌,以及两个含分枝病毒的菌株中提取了核酸,并获得了可靠的PCR鉴定结果。然而,使用One-Step法未能成功提取新型隐球菌的核酸,可能是由于切割其多糖胶囊的挑战。综上所述,One-Step方法显著缩短了核酸提取时间,同时提高了四种不同真菌的菌株筛选效率,在真菌生物学中具有广泛的适用性。
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引用次数: 0
Deciphering the role of mitochondria in human fungal drug resistance. 破译线粒体在人类真菌耐药性中的作用。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-03-10 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2473507
Yuanyuan Ma, Yachun Zhou, Tianyuan Jia, Zilin Zhuang, Peng Xue, Liang Yang

As pathogenic fungi increasingly threaten public health, particularly in immunocompromised populations, understanding the mechanisms behind fungal drug resistance has become critical. This review focuses on the pivotal role of mitochondria in this process. Evidence indicates that mitochondria are essential not only for cellular energy metabolism and responses to oxidative stress but also for significantly influencing the expression and activity of drug efflux pumps, which facilitate the expulsion of antifungal agents. Moreover, the intricate roles of mitochondria in iron homoeostasis and calcium signalling are closely linked to the development of drug resistance in fungi. By elucidating these mechanisms, we can identify potential therapeutic targets and pave the way for more effective strategies to combat resistant fungal infections.

随着致病真菌日益威胁公众健康,特别是在免疫功能低下人群中,了解真菌耐药性背后的机制变得至关重要。本文就线粒体在这一过程中的关键作用作一综述。有证据表明,线粒体不仅对细胞能量代谢和氧化应激反应至关重要,而且对促进抗真菌药物排出的药物外排泵的表达和活性也有重要影响。此外,线粒体在铁稳态和钙信号传导中的复杂作用与真菌耐药的发展密切相关。通过阐明这些机制,我们可以确定潜在的治疗靶点,并为更有效地对抗耐药真菌感染铺平道路。
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引用次数: 0
Fungal graviresponses: Physiological and molecular insights from tissue reorientation in the gravity vector. 真菌重力反应:重力矢量中组织重定向的生理和分子见解。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-03-09 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2474154
Alexander Baena, D Marshall Porterfield

Graviresponses, the growth responses of organisms to gravitational alterations, are pivotal yet understudied phenomena in fungi compared to plants and animals. Fungi perceive gravity through proposed statoliths, including nuclei connected to actin filaments, octahedral protein crystals, and floating lipid globules. These mechanisms generate sufficient potential energy to overcome thermal noise and establish detectable gradients within cells. Signal transduction involves ion fluxes, reactive oxygen species, and cytoskeletal components, transducing physical signals into polarised cell wall loosening. In mushroom-forming fungi, gravitropic responses manifest primarily through differential hyphal elongation in the stipe, while gravimorphogenetic responses cause broader developmental and morphological changes. Though basic fruiting body formation can occur in microgravity, proper spore dispersal requires gravity sensing which triggers molecular mechanisms involving precise regulation of cell wall modification, vesicle trafficking, and complex signalling cascades, particularly in specialised tissues of the fruiting body. Curvature compensation mechanisms ensure optimal vertical alignment of spore-bearing tissues through feedback systems. Studies of model organisms like Coprinopsis cinerea, Flammulina velutipes, and Phycomyces blakesleeanus have revealed species-specific gravisensing mechanisms that reflect diverse ecological strategies for spore dispersal. Despite advances in understanding these mechanisms, key questions remain about morphogenetic regulation and signal transduction. This review examines classical and modern findings while highlighting opportunities for investigation using contemporary molecular approaches.

重力反应是生物体对重力变化的生长反应,与植物和动物相比,真菌是一个关键但尚未得到充分研究的现象。真菌通过静石感知重力,包括连接肌动蛋白丝的核、八面体蛋白晶体和漂浮的脂质球。这些机制产生足够的势能来克服热噪声并在细胞内建立可检测的梯度。信号转导涉及离子通量、活性氧和细胞骨架成分,将物理信号转导成极化细胞壁松动。在成菇真菌中,向地性反应主要表现为茎柄中菌丝的差异伸长,而向地形态发生反应则引起更广泛的发育和形态变化。尽管基本的子实体形成可以在微重力条件下发生,但孢子的适当传播需要重力感应,这触发了包括细胞壁修饰、囊泡运输和复杂信号级联的精确调节的分子机制,特别是在子实体的特殊组织中。曲率补偿机制通过反馈系统确保孢子组织的最佳垂直对齐。对铜opsis cinerea、金针菇(Flammulina velutipes)和黑藻(Phycomyces blakesleanus)等模式生物的研究揭示了物种特有的重力感知机制,反映了孢子传播的多种生态策略。尽管在理解这些机制方面取得了进展,但关于形态发生调控和信号转导的关键问题仍然存在。这篇综述考察了经典和现代的发现,同时强调了使用当代分子方法进行调查的机会。
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引用次数: 0
Genetic diversity and molecular evolution of 3-carboxymuconate cyclase (Gp60-70), the major antigen in pathogenic Sporothrix species. 致病性孢子菌主要抗原3-羧酸环化酶(Gp60-70)的遗传多样性及分子进化
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-03-08 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2467118
Jamile Ambrósio de Carvalho, Thiago Costa Machado, Alexandre Augusto Sasaki, Fabian Glaser, Primavera Alvarado, Alexandro Bonifaz, Sarah Santos Gonçalves, Isabella Dib Gremião, Sandro Antonio Pereira, Olga Fischman Gompertz, Zoilo Pires de Camargo, Anderson Messias Rodrigues

Sporotrichosis, a neglected tropical disease caused by Sporothrix species, is a growing concern, particularly due to the emergence of highly virulent, cat-transmitted S. brasiliensis. Rapid diagnosis and surveillance are crucial for controlling sporotrichosis. This study investigated the 3-carboxymuconate cyclase (CMC) gene, which encodes the major Sporothrix antigen (Gp60-70), as a molecular marker to understand the genetic diversity and evolution of these fungi. Analysis of 104 isolates (S. brasiliensis, S. schenckii, S. globosa, and S. luriei) revealed 79 unique haplotypes, demonstrating superior discriminatory power over traditional molecular markers. High-CMC polymorphisms, especially in S. brasiliensis and S. schenckii, suggest recent population expansion or positive selection, potentially driven by environmental pressures such as polyaromatic hydrocarbon pollutants. The conserved chromosomal location of CMC in pathogenic Sporothrix and its absence in less virulent species suggest a role in virulence. Identifying conserved residues within predicted B-cell epitopes provides targets for diagnostics and therapeutics. Additionally, we identified N-linked glycosylation sequons (e.g. NGS at 62, NNT at 225, and NGT at 373/374) conserved in pathogenic Sporothrix but absent in environmental Sordariomycetes, possibly contributing to pathogenicity and niche adaptation. This study establishes CMC as a valuable marker for understanding Sporothrix evolution and virulence, aiding in sporotrichosis management.

孢子菌病是由孢子菌引起的一种被忽视的热带病,日益引起关注,特别是由于出现了高毒力的猫传播的巴西孢子虫。快速诊断和监测是控制孢子菌病的关键。本研究利用编码孢子丝菌主要抗原(Gp60-70)的3-羧酸环化酶(CMC)基因作为分子标记,了解孢子丝菌的遗传多样性和进化。对104个分离株(巴西孢子虫、申克孢子虫、全球孢子虫和卢氏孢子虫)的分析发现了79个独特的单倍型,显示出比传统分子标记更强的区分能力。高cmc多态性,特别是在巴西种和申克种中,表明最近的种群扩张或正选择可能是由环境压力(如多芳烃污染物)驱动的。CMC在致病孢子菌中染色体位置保守,而在毒性较弱的孢子菌中不存在,这表明它在毒力中起作用。在预测的b细胞表位内鉴定保守残基为诊断和治疗提供了靶点。此外,我们发现n -连锁糖基化序列(例如NGS 62, NNT 225和NGT 373/374)在致病性孢子菌中保守,但在环境型索达菌中不存在,可能有助于致病性和生态位适应。本研究确立了CMC作为了解孢子丝菌进化和毒力的有价值标记物,有助于孢子丝菌病的防治。
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引用次数: 0
The transcription factor PoMbp1 promotes the growth and development of Pleurotus ostreatus by regulating polysaccharide utilisation. 转录因子PoMbp1通过调节多糖的利用来促进平菇的生长发育。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-02-24 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2467115
Lijiao Zhang, Yingjie Zhang, Zeyin Wu, Mengran Zhao, Xiangli Wu, Chenyang Huang

The transcription factor Mbp1 was reported to regulate cell growth and proliferation in some fungi; however, its role in Pleurotus ostreatus remains largely unexplored. Here, we cloned the PoMbp1 gene, which encodes a protein contains an APSES domain and is localised in the nucleus. The expression pattern analysis showed that PoMbp1 was expressed more in the caps of the fruiting body than in other stages. The growth rates of the PoMbp1 overexpression strains OE-PoMbp1 were similar to those of wild-type, while that in the interference strains RNAi-PoMbp1 were markedly reduced, indicating that PoMbp1 positively regulates P. ostreatus development. Transcriptome sequencing showed that the DEGs between PoMbp1 transformants and wild-type mainly enriched in carbohydrate metabolism, cell growth and death, etc. The DEGs in polysaccharide catabolic were highly expressed in the OE-PoMbp1 strains. Treat PoMbp1 transformants with different monosaccharides and polysaccharides, the OE-PoMbp1 strains grew faster than wild-type on medium containing polysaccharide, whereas no differences were observed with monosaccharides. The RNAi-PoMbp1 strains showed an opposite trend. These results indicated that PoMbp1 plays a positive role in fruit body development by enhancing the expression of genes related to polysaccharide utilisation. This study provides a theoretical reference for research on the mechanism of fruiting body development of P. ostreatus.

转录因子Mbp1被报道在一些真菌中调节细胞生长和增殖;然而,它在平菇中的作用在很大程度上仍未被探索。在这里,我们克隆了PoMbp1基因,该基因编码一种包含APSES结构域的蛋白质,并定位于细胞核中。表达谱分析表明,PoMbp1在子实体帽部的表达量高于其他部位。PoMbp1过表达菌株OE-PoMbp1的生长速率与野生型相似,而干扰菌株RNAi-PoMbp1的生长速率明显降低,表明PoMbp1正调控了P. ostreatus的发育。转录组测序显示,PoMbp1转化体与野生型之间的DEGs主要富集于碳水化合物代谢、细胞生长和死亡等方面。在OE-PoMbp1菌株中,多糖分解代谢中的DEGs表达量较高。用不同的单糖和多糖处理PoMbp1转化子,OE-PoMbp1菌株在含多糖培养基上的生长速度快于野生型,而单糖培养基无差异。RNAi-PoMbp1菌株表现出相反的趋势。这些结果表明,PoMbp1通过增强多糖利用相关基因的表达,在果实体发育中发挥积极作用。该研究结果为研究紫叶橐吾子实体发育机制提供了理论参考。
{"title":"The transcription factor PoMbp1 promotes the growth and development of <i>Pleurotus ostreatus</i> by regulating polysaccharide utilisation.","authors":"Lijiao Zhang, Yingjie Zhang, Zeyin Wu, Mengran Zhao, Xiangli Wu, Chenyang Huang","doi":"10.1080/21501203.2025.2467115","DOIUrl":"10.1080/21501203.2025.2467115","url":null,"abstract":"<p><p>The transcription factor Mbp1 was reported to regulate cell growth and proliferation in some fungi; however, its role in <i>Pleurotus ostreatus</i> remains largely unexplored. Here, we cloned the <i>PoMbp1</i> gene, which encodes a protein contains an APSES domain and is localised in the nucleus. The expression pattern analysis showed that <i>PoMbp1</i> was expressed more in the caps of the fruiting body than in other stages. The growth rates of the <i>PoMbp1</i> overexpression strains OE-<i>PoMbp1</i> were similar to those of wild-type, while that in the interference strains RNAi-<i>PoMbp1</i> were markedly reduced, indicating that <i>PoMbp1</i> positively regulates <i>P. ostreatus</i> development. Transcriptome sequencing showed that the DEGs between <i>PoMbp1</i> transformants and wild-type mainly enriched in carbohydrate metabolism, cell growth and death, etc. The DEGs in polysaccharide catabolic were highly expressed in the OE-<i>PoMbp1</i> strains. Treat <i>PoMbp1</i> transformants with different monosaccharides and polysaccharides, the OE-<i>PoMbp1</i> strains grew faster than wild-type on medium containing polysaccharide, whereas no differences were observed with monosaccharides. The RNAi-<i>PoMbp1</i> strains showed an opposite trend. These results indicated that PoMbp1 plays a positive role in fruit body development by enhancing the expression of genes related to polysaccharide utilisation. This study provides a theoretical reference for research on the mechanism of fruiting body development of <i>P. ostreatus</i>.</p>","PeriodicalId":18833,"journal":{"name":"Mycology","volume":"16 4","pages":"1781-1796"},"PeriodicalIF":4.4,"publicationDate":"2025-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12667323/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145661197","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Catalogue of fungi in China 6: Rhytismataceae on twigs of Rhododendron. 中国真菌目录(6):杜鹃枝上的曲曲霉科。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-02-19 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2461211
Mei-Jun Guo, Lan Zhuo, Shi-Juan Wang, Xiao-Nan Sui, Xiao-Ye Shen, Cheng-Lin Hou

Members of the Rhytismataceae (Rhytismatales) are found all over the world, which include saprobes, endophytes, and plant pathogens. They can infect a wide variety of host plants and cause plant diseases. As one of the most preferred hosts of rhytismatalean fungi, a total of 90 species of Rhytismatales in 21 genera are known by Rhododendron spp. worldwide, including 53 species on twigs and 37 species on leaves. In this research, a sum of 46 specimens were collected from the twigs of Rhododendron species in China. Subsequently, based on multi-gene phylogenetic analyses using molecular sequence data from the internal transcribed spacer (ITS) region, the large subunit of the ribosomal RNA gene (nrLSU), the mitochondrial small subunit (mtSSU), and morphological characteristics, three new genera were proposed (Neolophodermium, Truncomyces, and Virgamyces), and 21 species in 11 genera of Rhytismataceae were delimited, which include 18 new species and three new combinations. This study complements the diversity of Rhytismataceae on twigs of Rhododendron. An integrated taxonomic approach includes the evidence for morphological characteristics, the ecological data, and the phylogenetic analyses based on multiple loci and was demonstrated, which can be defined a natural classification of Rhytismataceae on the genus level.

Rhytismatales (Rhytismatales)的成员遍布世界各地,包括腐殖菌,内生菌和植物病原体。它们可以感染多种寄主植物并引起植物疾病。杜鹃花属(Rhododendron spp.)共有21属90种,其中枝上53种,叶上37种,是rhytismatalae真菌的首选寄主之一。本研究共采集了中国杜鹃花属植物枝条标本46份。随后,基于内部转录间隔区(ITS)分子序列数据、核糖体RNA基因大亚基(nrLSU)、线粒体小亚基(mtSSU)及形态特征的多基因系统发育分析,提出了3个新属(Neolophodermium、Truncomyces和Virgamyces),并划分了11属21种,其中包括18个新种和3个新组合。该研究补充了杜鹃属植物细枝上纹柳科植物的多样性。综合形态学特征证据、生态学数据和基于多位点的系统发育分析,提出了一种在属水平上的自然分类方法。
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引用次数: 0
Unraveling the mycobiota of Daqu at the species level using metabarcoding of full-length ITS sequences. 利用ITS全长序列元条形码在种水平上揭示大曲菌群。
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-02-19 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2460495
Da-Yong Han, Xue-Wei Wang, Jos Houbraken, Liang Song, Zhang Wen, Hai-Yan Zhu, Yu-Hua Wei, Lu-Jun Luo, Ju-Wei Wang, Shen-Xi Chen, Shang-Jie Yao, Zhen-Rong Liang, Meng-Meng Zhang, Chao-Jiu He, Feng-Yan Bai, Pei-Jie Han

Daqu, the starter used in Baijiu making process, is produced by spontaneous solid-state fermentation and contains numerous microbes and enzymes, significantly influencing the yield and flavour profile of Baijiu. In this study, we employed a full-length ITS metabarcoding approach using the PacBio sequencing technology to investigate the fungal diversity in 296 samples of low- (LTD), medium- (MTD) and high-temperature Daqu (HTD) collected from 10 provinces in China. In total, we identified 86 species or species groups in the fungal communities of Daqu. The fungal communities of the three types of Daqu were significantly different and the differences were also associated with their geographical origins. Ascoideales (relative abundance 21.04%), Pichiales (15.38%), Mucorales (39.54%) and Eurotiales (19.96%) totally accounted for 95.92% of the fungal community of the Daqu samples. The former two were significantly enriched in the LTD samples and the latter two in the MTD and HTD samples, respectively. We also identified the distinct fungal species that showed differential enrichment within each Daqu type as well as among samples of the same type originating from different regions. These findings offer a deeper insight into the fungal communities associated with various Daqu types and their geographical origins at the species level.

大曲是白酒酿造过程中使用的发酵剂,它是由自然固态发酵产生的,含有大量的微生物和酶,对白酒的产量和风味有重要影响。本研究利用PacBio测序技术,采用ITS元条形码方法,对来自中国10个省份的296份低(LTD)、中(MTD)和高温大曲(HTD)样品的真菌多样性进行了研究。在大曲真菌群落中共鉴定出86种或种群。三种类型的大曲真菌群落存在显著差异,其差异也与其地理来源有关。Ascoideales(相对丰度21.04%)、Pichiales(相对丰度15.38%)、Mucorales(相对丰度39.54%)和Eurotiales(相对丰度19.96%)共占大曲样品真菌群落的95.92%。前两者在LTD样品中显著富集,后两者分别在MTD和HTD样品中显著富集。我们还发现了不同种类的真菌,它们在每个大曲类型中以及来自不同地区的同一类型样品中表现出不同的富集程度。这些发现在物种水平上对与不同大曲类型相关的真菌群落及其地理起源有了更深入的了解。
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引用次数: 0
Prevalence, drug resistance and genetic diversity of Candida glabrata in the reproductive tract of pregnant women in Hainan and comparison with global multilocus sequence data. 海南孕妇生殖道光念珠菌的流行、耐药性和遗传多样性及其与全球多位点序列数据的比较
IF 4.4 2区 生物学 Q1 MYCOLOGY Pub Date : 2025-02-18 eCollection Date: 2025-01-01 DOI: 10.1080/21501203.2025.2461725
Qiaoyi Meng, Huiting Wang, Weihao Xiao, Wenhui Mai, Yiwei Liu, Yaxuan Xiao, Peng Wang, Jinlei Sui, Xiaowen He, Feifei Yin, Jianping Xu, Jinyan Wu

This study investigates the prevalence, drug resistance, and genetic diversity of Candida glabrata, a significant non-albicans Candida species, among pregnant women in Hainan, China. We collected 3,806 reproductive tract secretion samples from women with vaginal discomfort and isolated 594 Candida strains, including C. albicans (45.1%), C. glabrata (36.2%), C. dubliniensis (12.2%), C. parapsilosis (2.7%), C. tropicalis (2.7%), and C. krusei (1.2%). Antifungal susceptibility testing showed that 64.5% of the isolates were intermediate or resistant to at least one of four antifungal agents: fluconazole, itraconazole, voriconazole, and amphotericin B. Among 215 C. glabrata isolates, 81.4% were intermediate or resistant to at least one antifungal, with 10% showing resistance to multiple agents. Multilocus sequence typing (MLST) of 52 C. glabrata strains from the reproductive tract, 53 from oral cavities, and 17 from environmental sources revealed 14 sequence types (STs), with six STs shared among these niches, indicating a highly clonal population structure. Comparisons with the global MLST database showed both shared and distinct characteristics among C. glabrata populations in Hainan and other regions, highlighting significant differentiation. We discuss the implications of these findings to the epidemiology and evolution of this pathogen.

本研究调查了海南孕妇中一种重要的非白色念珠菌——光念珠菌(Candida glabrata)的流行、耐药性和遗传多样性。共收集阴道不适女性生殖道分泌物标本3806份,分离出念珠菌594株,其中白色念珠菌(45.1%)、光丝念珠菌(36.2%)、杜布里尼念珠菌(12.2%)、拟裂丝念珠菌(2.7%)、热带念珠菌(2.7%)、克鲁塞念珠菌(1.2%)。抗真菌药敏试验显示,64.5%的分离株对氟康唑、伊曲康唑、伏立康唑和两性霉素b 4种抗真菌药物中至少有一种耐药,81.4%的分离株对至少一种抗真菌药物耐药,10%的分离株对多种抗真菌药物耐药。对52株来自生殖道、53株来自口腔和17株来自环境来源的光斑念珠菌进行多位点序列分型(MLST)分析,发现14个序列类型(STs),其中6个STs在这些生态位间共享,表明群体结构高度克隆化。与全球MLST数据库的比较显示,海南和其他地区的光棘草种群既有共同的特征,又有不同的特征,差异显著。我们讨论了这些发现的影响,流行病学和进化的病原体。
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