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Phase separation rewires chromatin in breast cancer. 相分离重构乳腺癌染色质
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-25 DOI: 10.1038/s43018-024-00843-9
Rosaria Benedetti, Lucia Altucci
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引用次数: 0
Selenocysteine tRNA methylation promotes oxidative stress resistance in melanoma metastasis. 硒半胱氨酸 tRNA 甲基化促进黑色素瘤转移过程中的氧化应激抵抗力
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-22 DOI: 10.1038/s43018-024-00844-8
Leona A Nease, Kellsey P Church, Ines Delclaux, Shino Murakami, Maider Astorkia, Marwa Zerhouni, Graciela Cascio, Riley O Hughes, Kelsey N Aguirre, Paul Zumbo, Lukas E Dow, Samie Jaffrey, Doron Betel, Elena Piskounova

Selenocysteine-containing proteins play a central role in redox homeostasis. Their translation is a highly regulated process and is dependent on two tRNASec isodecoders differing by a single 2'-O-ribose methylation called Um34. Here we characterized FTSJ1 as the Um34 methyltransferase and show that its activity is required for efficient selenocysteine insertion at the UGA stop codon during translation. Specifically, loss of Um34 leads to ribosomal stalling and decreased UGA recoding. FTSJ1-deficient cells are more sensitive to oxidative stress and show decreased metastatic colonization in xenograft models of melanoma metastasis. We found that FTSJ1 mediates efficient translation of selenoproteins essential for the cellular antioxidant response. Our findings uncover a role for tRNASec Um34 modification in oxidative stress resistance and highlight FTSJ1 as a potential therapeutic target specific for metastatic disease.

含硒半胱氨酸的蛋白质在氧化还原平衡中发挥着核心作用。它们的翻译是一个高度受调控的过程,依赖于两个 tRNASec 同编码器,这两个同编码器之间存在一个称为 Um34 的 2'-O-ribose 甲基化。在这里,我们将 FTSJ1 鉴定为 Um34 甲基转移酶,并证明其活性是翻译过程中在 UGA 终止密码子处有效插入硒半胱氨酸所必需的。具体来说,Um34 的缺失会导致核糖体停滞和 UGA 重编码的减少。FTSJ1缺陷细胞对氧化应激更敏感,并在黑色素瘤转移的异种移植模型中显示出转移定植能力下降。我们发现,FTSJ1介导了对细胞抗氧化反应至关重要的硒蛋白的高效翻译。我们的研究结果揭示了 tRNASec Um34 修饰在氧化应激抵抗中的作用,并强调 FTSJ1 是转移性疾病的一个潜在治疗靶点。
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引用次数: 0
Two distinct epithelial-to-mesenchymal transition programs control invasion and inflammation in segregated tumor cell populations. 两种不同的上皮-间质转化程序控制着隔离肿瘤细胞群的侵袭和炎症。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-16 DOI: 10.1038/s43018-024-00839-5
Khalil Kass Youssef, Nitin Narwade, Aida Arcas, Angel Marquez-Galera, Raúl Jiménez-Castaño, Cristina Lopez-Blau, Hassan Fazilaty, David García-Gutierrez, Amparo Cano, Joan Galcerán, Gema Moreno-Bueno, Jose P Lopez-Atalaya, M Angela Nieto

Epithelial-to-mesenchymal transition (EMT) triggers cell plasticity in embryonic development, adult injured tissues and cancer. Combining the analysis of EMT in cell lines, embryonic neural crest and mouse models of renal fibrosis and breast cancer, we find that there is not a cancer-specific EMT program. Instead, cancer cells dedifferentiate and bifurcate into two distinct and segregated cellular trajectories after activating either embryonic-like or adult-like EMTs to drive dissemination or inflammation, respectively. We show that SNAIL1 acts as a pioneer factor in both EMT trajectories, and PRRX1 drives the progression of the embryonic-like invasive trajectory. We also find that the two trajectories are plastic and interdependent, as the abrogation of the EMT invasive trajectory by deleting Prrx1 not only prevents metastasis but also enhances inflammation, increasing the recruitment of antitumor macrophages. Our data unveil an additional role for EMT in orchestrating intratumor heterogeneity, driving the distribution of functions associated with either inflammation or metastatic dissemination.

上皮细胞向间质转化(EMT)在胚胎发育、成人损伤组织和癌症中引发细胞可塑性。结合对细胞系、胚胎神经嵴以及肾脏纤维化和乳腺癌小鼠模型中 EMT 的分析,我们发现并不存在癌症特异性 EMT 程序。相反,癌细胞在激活胚胎样或成体样 EMTs 以分别驱动扩散或炎症后,会发生去分化并分叉成两种不同的隔离细胞轨迹。我们发现,SNAIL1 在两种 EMT 轨迹中都起着先驱因子的作用,而 PRRX1 则驱动着胚胎样侵袭性轨迹的发展。我们还发现,这两种轨迹具有可塑性和相互依赖性,因为通过删除 Prrx1 来消除 EMT 侵袭轨迹不仅能防止转移,还能增强炎症反应,增加抗肿瘤巨噬细胞的招募。我们的数据揭示了 EMT 在协调肿瘤内异质性方面的另一个作用,它推动了与炎症或转移扩散相关的功能的分布。
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引用次数: 0
Developmental mosaicism underlying EGFR-mutant lung cancer presenting with multiple primary tumors. 表皮生长因子受体(EGFR)突变型肺癌伴多发性原发肿瘤的发育嵌合基础。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-15 DOI: 10.1038/s43018-024-00840-y
Risa Burr, Ignaty Leshchiner, Christina L Costantino, Martin Blohmer, Tilak Sundaresan, Justin Cha, Karsen Seeger, Sara Guay, Brian P Danysh, Ira Gore, Raquel A Jacobs, Kara Slowik, Filippo Utro, Kahn Rhrissorrakrai, Chaya Levovitz, Jaimie L Barth, Taronish Dubash, Brian Chirn, Laxmi Parida, Lecia V Sequist, Jochen K Lennerz, Mari Mino-Kenudson, Shyamala Maheswaran, Kamila Naxerova, Gad Getz, Daniel A Haber

Although the development of multiple primary tumors in smokers with lung cancer can be attributed to carcinogen-induced field cancerization, the occurrence of multiple tumors at presentation in individuals with EGFR-mutant lung cancer who lack known environmental exposures remains unexplained. In the present study, we identified ten patients with early stage, resectable, non-small cell lung cancer who presented with multiple, anatomically distinct, EGFR-mutant tumors. We analyzed the phylogenetic relationships among multiple tumors from each patient using whole-exome sequencing (WES) and hypermutable poly(guanine) (poly(G)) repeat genotyping as orthogonal methods for lineage tracing. In four patients, developmental mosaicism, assessed by WES and poly(G) lineage tracing, indicates a common non-germline cell of origin. In two other patients, we identified germline EGFR variants, which confer moderately enhanced signaling when modeled in vitro. Thus, in addition to germline variants, developmental mosaicism defines a distinct mechanism of genetic predisposition to multiple EGFR-mutant primary tumors, with implications for their etiology and clinical management.

虽然吸烟者肺癌患者出现多发性原发肿瘤的原因可能是致癌物质诱发的野外癌化,但对于没有已知环境暴露的表皮生长因子受体(EGFR)突变肺癌患者来说,出现多发性肿瘤的原因仍然不明。在本研究中,我们发现了十名早期、可切除的非小细胞肺癌患者,他们出现了多个解剖学上不同的表皮生长因子受体突变肿瘤。我们使用全外显子组测序(WES)和高变异多聚鸟嘌呤(poly(G))重复基因分型作为正交的世系追踪方法,分析了每位患者多个肿瘤之间的系统发育关系。在四名患者中,通过 WES 和多聚(G)系谱追踪评估的发育马赛克现象表明有一个共同的非生殖细胞来源。在另外两名患者中,我们发现了表皮生长因子受体(EGFR)的种系变体,这些变体在体外建模时可适度增强信号传导。因此,除了种系变异外,发育嵌合还定义了一种独特的遗传易感性机制,即多种表皮生长因子受体突变原发性肿瘤,这对其病因学和临床治疗都有影响。
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引用次数: 0
The neuroendocrine transition in prostate cancer is dynamic and dependent on ASCL1. 前列腺癌的神经内分泌转变是动态的,依赖于 ASCL1。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-11 DOI: 10.1038/s43018-024-00838-6
Rodrigo Romero, Tinyi Chu, Tania J González Robles, Perianne Smith, Yubin Xie, Harmanpreet Kaur, Sara Yoder, Huiyong Zhao, Chenyi Mao, Wenfei Kang, Maria V Pulina, Kayla E Lawrence, Anuradha Gopalan, Samir Zaidi, Kwangmin Yoo, Jungmin Choi, Ning Fan, Olivia Gerstner, Wouter R Karthaus, Elisa DeStanchina, Kelly V Ruggles, Peter M K Westcott, Ronan Chaligné, Dana Pe'er, Charles L Sawyers

Lineage plasticity is a hallmark of cancer progression that impacts therapy outcomes, yet the mechanisms mediating this process remain unclear. Here, we introduce a versatile in vivo platform to interrogate neuroendocrine lineage transformation throughout prostate cancer progression. Transplanted mouse prostate organoids with human-relevant driver mutations (Rb1-/-; Trp53-/-; cMyc+ or Pten-/-; Trp53-/-; cMyc+) develop adenocarcinomas, but only those with Rb1 deletion advance to aggressive, ASCL1+ neuroendocrine prostate cancer (NEPC) resistant to androgen receptor signaling inhibitors. Notably, this transition requires an in vivo microenvironment not replicated by conventional organoid culture. Using multiplexed immunofluorescence and spatial transcriptomics, we reveal that ASCL1+ cells arise from KRT8+ luminal cells, progressing into transcriptionally heterogeneous ASCL1+;KRT8- NEPC. Ascl1 loss in established NEPC causes transient regression followed by recurrence, but its deletion before transplantation abrogates lineage plasticity, resulting in castration-sensitive adenocarcinomas. This dynamic model highlights the importance of therapy timing and offers a platform to identify additional lineage plasticity drivers.

系谱可塑性是癌症进展的一个标志,会影响治疗效果,但这一过程的介导机制仍不清楚。在这里,我们引入了一个多功能体内平台来研究前列腺癌进展过程中的神经内分泌谱系转化。移植的小鼠前列腺器官组织具有人类相关的驱动突变(Rb1-/-; Trp53-/-; cMyc+或Pten-/-; Trp53-/-; cMyc+),会发展成腺癌,但只有Rb1缺失的组织才会发展成对雄激素受体信号抑制剂有抵抗力的侵袭性ASCL1+神经内分泌前列腺癌(NEPC)。值得注意的是,这种转变需要体内微环境,而传统的类器官培养无法复制。利用多重免疫荧光和空间转录组学,我们揭示了 ASCL1+ 细胞来源于 KRT8+ 管腔细胞,并发展成为转录异质性的 ASCL1+;KRT8- NEPC。在已建立的 NEPC 中缺失 Ascl1 会导致一过性消退,随后复发,但在移植前缺失 Ascl1 则会削弱细胞系的可塑性,导致对阉割敏感的腺癌。这一动态模型强调了治疗时机的重要性,并为确定其他细胞系可塑性驱动因素提供了一个平台。
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引用次数: 0
Publisher Correction: Integrative proteogenomic profiling of high-risk prostate cancer samples from Chinese patients indicates metabolic vulnerabilities and diagnostic biomarkers. 出版商更正:中国高危前列腺癌样本的综合蛋白质基因组分析显示了代谢脆弱性和诊断生物标志物。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-01 DOI: 10.1038/s43018-024-00845-7
Baijun Dong, Jun-Yu Xu, Yuqi Huang, Jiacheng Guo, Qun Dong, Yanqing Wang, Ni Li, Qiuli Liu, Mingya Zhang, Qiang Pan, Hanling Wang, Jun Jiang, Bairun Chen, Danqing Shen, Yiming Ma, Linhui Zhai, Jian Zhang, Jing Li, Wei Xue, Minjia Tan, Jun Qin
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引用次数: 0
CAR-redirected natural killer T cells demonstrate superior antitumor activity to CAR-T cells through multimodal CD1d-dependent mechanisms. CAR-redirected 自然杀伤 T 细胞通过 CD1d 依赖性多模式机制显示出优于 CAR-T 细胞的抗肿瘤活性。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-01 DOI: 10.1038/s43018-024-00830-0
Xin Zhou, Ying Wang, Zhangqi Dou, Gloria Delfanti, Ourania Tsahouridis, Caroline Marnata Pellegry, Manuela Zingarelli, Gatphan Atassi, Mark G Woodcock, Giulia Casorati, Paolo Dellabona, William Y Kim, Linjie Guo, Barbara Savoldo, Ageliki Tsagaratou, J Justin Milner, Leonid S Metelitsa, Gianpietro Dotti

Human natural killer T (NKT) cells have been proposed as a promising cell platform for chimeric antigen receptor (CAR) therapy in solid tumors. Here we generated murine CAR-NKT cells and compared them with CAR-T cells in immune-competent mice. Both CAR-NKT cells and CAR-T cells showed similar antitumor effects in vitro, but CAR-NKT cells showed superior antitumor activity in vivo via CD1d-dependent immune responses in the tumor microenvironment. Specifically, we show that CAR-NKT cells eliminate CD1d-expressing M2-like macrophages. In addition, CAR-NKT cells promote epitope spreading and activation of endogenous T cell responses against tumor-associated neoantigens. Finally, we observed that CAR-NKT cells can co-express PD1 and TIM3 and show an exhaustion phenotype in a model of high tumor burden. PD1 blockade as well as vaccination augmented the antitumor activity of CAR-NKT cells. In summary, our results demonstrate the multimodal function of CAR-NKT cells in solid tumors, further supporting the rationale for developing CAR-NKT therapies in the clinic.

人类自然杀伤 T(NKT)细胞被认为是一种有希望用于实体瘤嵌合抗原受体(CAR)疗法的细胞平台。在这里,我们生成了小鼠 CAR-NKT 细胞,并在免疫功能正常的小鼠体内将其与 CAR-T 细胞进行了比较。CAR-NKT 细胞和 CAR-T 细胞在体外表现出相似的抗肿瘤效果,但 CAR-NKT 细胞通过肿瘤微环境中 CD1d 依赖性免疫反应在体内表现出更优越的抗肿瘤活性。具体来说,我们发现 CAR-NKT 细胞能消灭表达 CD1d 的 M2 样巨噬细胞。此外,CAR-NKT 细胞还能促进表位扩散,激活内源性 T 细胞对肿瘤相关新抗原的反应。最后,我们观察到 CAR-NKT 细胞能同时表达 PD1 和 TIM3,并在高肿瘤负荷模型中表现出衰竭表型。PD1 阻断和疫苗接种增强了 CAR-NKT 细胞的抗肿瘤活性。总之,我们的研究结果证明了CAR-NKT细胞在实体瘤中的多模式功能,进一步支持了在临床中开发CAR-NKT疗法的理由。
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引用次数: 0
Co-targeting metabolism and epigenetics in MDS with telaglenastat and azacytidine 泰拉格司他和氮杂胞苷共同靶向 MDS 的代谢和表观遗传学。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-27 DOI: 10.1038/s43018-024-00812-2
Azacytidine is used as standard treatment for myelodysplastic syndrome (MDS) but, although it induces responses, remissions are rare and not durable. In patients with MDS, malignant cells rely on glutamine for survival and exhibit elevated levels of glutaminase, an essential enzyme for glutamine metabolism. Our results from preclinical and clinical studies demonstrate the effectiveness of combining the glutaminase inhibitor telaglenastat with azacytidine in advanced MDS.
氮杂胞苷被用作骨髓增生异常综合征(MDS)的标准治疗方法,但尽管它能诱导反应,缓解却很少且不持久。在骨髓增生异常综合症患者中,恶性细胞依赖谷氨酰胺生存,并表现出谷氨酰胺酶水平的升高,而谷氨酰胺酶是谷氨酰胺代谢的必需酶。我们的临床前和临床研究结果表明,谷氨酰胺酶抑制剂泰拉格司他与氮杂胞苷联合治疗晚期MDS是有效的。
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引用次数: 0
Spatial single-cell protein landscape reveals vimentinhigh macrophages as immune-suppressive in the microenvironment of hepatocellular carcinoma 空间单细胞蛋白图谱揭示了高波形蛋白巨噬细胞在肝癌微环境中的免疫抑制作用。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-26 DOI: 10.1038/s43018-024-00824-y
Xinyao Qiu, Tao Zhou, Shuai Li, Jianmin Wu, Jing Tang, Guosheng Ma, Shuai Yang, Ji Hu, Kaiting Wang, Siyun Shen, Hongyang Wang, Lei Chen
Tumor microenvironment heterogeneity in hepatocellular carcinoma (HCC) on a spatial single-cell resolution is unclear. Here, we conducted co-detection by indexing to profile the spatial heterogeneity of 401 HCC samples with 36 biomarkers. By parsing the spatial tumor ecosystem of liver cancer, we identified spatial patterns with distinct prognosis and genomic and molecular features, and unveiled the progressive role of vimentin (VIM)high macrophages. Integration analysis with eight independent cohorts demonstrated that the spatial co-occurrence of VIMhigh macrophages and regulatory T cells promotes tumor progression and favors immunotherapy. Functional studies further demonstrated that VIMhigh macrophages enhance the immune-suppressive activity of regulatory T cells by mechanistically increasing the secretion of interleukin-1β. Our data provide deep insights into the heterogeneity of tumor microenvironment architecture and unveil the critical role of VIMhigh macrophages during HCC progression, which holds potential for personalized cancer prevention and drug discovery and reinforces the need to resolve spatial-informed features for cancer treatment. Qui et al. perform co-detection by indexing profiling of 401 hepatocellular carcinoma patient samples and identify a role for vimentinhigh macrophages in instructing an immune-suppressive microenvironment by enhancing the suppressive activity of regulatory T cells via interleukin-1β.
肝细胞癌(HCC)肿瘤微环境异质性的空间单细胞分辨率尚不明确。在这里,我们通过索引进行了联合检测,用 36 个生物标记物对 401 个 HCC 样本的空间异质性进行了剖析。通过解析肝癌的空间肿瘤生态系统,我们发现了具有不同预后、基因组和分子特征的空间模式,并揭示了高波形蛋白(VIM)巨噬细胞的渐进作用。对八个独立队列的整合分析表明,VIM 高巨噬细胞和调节性 T 细胞的空间共存促进了肿瘤的进展并有利于免疫治疗。功能研究进一步证明,VIMhigh 巨噬细胞通过从机理上增加白细胞介素-1β的分泌来增强调节性T细胞的免疫抑制活性。我们的数据深入揭示了肿瘤微环境结构的异质性,并揭示了VIMhigh巨噬细胞在HCC进展过程中的关键作用,这为个性化癌症预防和药物发现提供了潜力,并加强了解决癌症治疗的空间信息特征的必要性。
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引用次数: 0
Spatial analysis reveals targetable macrophage-mediated mechanisms of immune evasion in hepatocellular carcinoma minimal residual disease 空间分析揭示了由巨噬细胞介导的肝癌极小残留病免疫逃避机制。
IF 23.5 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-20 DOI: 10.1038/s43018-024-00828-8
Lea Lemaitre, Nia Adeniji, Akanksha Suresh, Reshma Reguram, Josephine Zhang, Jangho Park, Amit Reddy, Alexandro E. Trevino, Aaron T. Mayer, Anja Deutzmann, Aida S. Hansen, Ling Tong, Vinodhini Arjunan, Neeraja Kambham, Brendan C. Visser, Monica M. Dua, C. Andrew Bonham, Nishita Kothary, H. Blaize D’Angio, Ryan Preska, Yanay Rosen, James Zou, Vivek Charu, Dean W. Felsher, Renumathy Dhanasekaran
Hepatocellular carcinoma (HCC) frequently recurs from minimal residual disease (MRD), which persists after therapy. Here, we identified mechanisms of persistence of residual tumor cells using post-chemoembolization human HCC (n = 108 patients, 1.07 million cells) and a transgenic mouse model of MRD. Through single-cell high-plex cytometric imaging, we identified a spatial neighborhood within which PD-L1 + M2-like macrophages interact with stem-like tumor cells, correlating with CD8+ T cell exhaustion and poor survival. Further, through spatial transcriptomics of residual HCC, we showed that macrophage-derived TGFβ1 mediates the persistence of stem-like tumor cells. Last, we demonstrate that combined blockade of Pdl1 and Tgfβ excluded immunosuppressive macrophages, recruited activated CD8+ T cells and eliminated residual stem-like tumor cells in two mouse models: a transgenic model of MRD and a syngeneic orthotopic model of doxorubicin-resistant HCC. Thus, our spatial analyses reveal that PD-L1+ macrophages sustain MRD by activating the TGFβ pathway in stem-like cancer cells and targeting this interaction may prevent HCC recurrence from MRD. Dhanasekaran and colleagues study minimal residual disease in hepatocellular carcinoma using single-cell spatial transcriptomic and proteomic analysis and find a targetable role for immunosuppressive macrophages.
肝细胞癌(HCC)经常因最小残留病(MRD)而复发,MRD 在治疗后仍然存在。在这里,我们利用化疗栓塞后人类 HCC(n = 108 例患者,107 万个细胞)和 MRD 转基因小鼠模型确定了残留肿瘤细胞的持续存在机制。通过单细胞高倍细胞计量成像,我们确定了PD-L1 + M2样巨噬细胞与干样肿瘤细胞相互作用的空间邻域,该邻域与CD8+ T细胞衰竭和生存率低下相关。此外,通过残留 HCC 的空间转录组学,我们发现巨噬细胞衍生的 TGFβ1 介导了干样肿瘤细胞的持续存在。最后,我们证明了在两种小鼠模型中联合阻断 Pdl1 和 Tgfβ 可排除免疫抑制巨噬细胞、招募活化的 CD8+ T 细胞并消除残留的干样肿瘤细胞:MRD 的转基因模型和多柔比星耐药 HCC 的同种异体模型。因此,我们的空间分析表明,PD-L1+巨噬细胞通过激活干样癌细胞中的TGFβ通路来维持MRD,针对这种相互作用可防止MRD导致的HCC复发。
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引用次数: 0
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Nature cancer
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