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Reaction of soybean cultivars to two races of Meloidogyne enterolobii and their aggressiveness under plastic house conditions 大豆品种对2个小种肠曲裂蝇的反应及其在塑料温室条件下的侵袭性
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-08-01 DOI: 10.1163/15685411-bja10266
Jorge B. S. Verssiani, Caio F. B. Souza, P. S. Santos, C. Arias, J. Cares, R. G. Carneiro
Limited information is available regarding the susceptibility or resistance of soybean cultivars to Meloidogyne enterolobii. Recently, a new race of this species was detected in Brazil parasitising cotton and soybean. This nematode has the potential to pose a problem in both of these crops, since it is pathogenic and virulent to several economically important plants that have resistance genes to other Meloidogyne species. The aim of this study was to assess the responses of EMBRAPA’s main soybean cultivars with confirmed resistance to M. incognita and M. javanica to the two races of M. enterolobii detected in Brazil. Additionally, this study aimed to characterise the aggressiveness of these nematode races. The experiments were conducted in a plastic house, in a factorial scheme with 16 soybean cultivars × two M. enterolobii races (guava and cotton), totalling 32 treatments × eight replications, and evaluated with two replications over time. Soybean sowing took place in pots containing 1.7 l of a mixture of soil, sand and Bioplant® substrate (1:1:1), previously autoclaved. Each soybean plant was inoculated with 5000 eggs of M. enterolobii. After 75 days for the first experiment, and 90 days for the second, the following variables were evaluated: gall index (GI), egg mass index (EMI), total number of eggs per g root (NEGR) and the reproduction factor (RF). Both races of M. enterolobii showed reproductive ability in all soybean genotypes (with or without known genetic resistance), albeit with moderate to low values in comparison to their reproduction on tomato plants. The race from cotton was considered statistically more aggressive than the guava population on soybean cultivars. Only ‘BRS 7180 IPRO’ was moderately resistant to both races in both experiments. In view of the importance and prospects for expansion of the soybean crop, the findings of this study contribute to a better understanding of the resistance and aggressiveness exhibited by the two races of M. enterolobii, Moreover, the study highlights the significant challenge that lies ahead in developing breeding programmes to select soybean genotypes with multiple resistance to Meloidogyne spp.
关于大豆品种对肠根结线虫的易感性或抗性的信息有限。最近,在巴西发现了一个寄生在棉花和大豆上的新品种。这种线虫有可能在这两种作物中造成问题,因为它对几种对其他根结线虫物种具有抗性基因的经济重要植物具有致病性和毒力。本研究的目的是评估EMBRAPA的主要大豆品种对在巴西检测到的两个小种的M.enterolobii的反应。此外,本研究旨在描述这些线虫小种的攻击性。实验在塑料房中进行,采用析因方案,用16个大豆品种×两个肠叶豆小种(番石榴和棉花),共32个处理×8个重复,并随着时间的推移用两个重复进行评估。大豆播种在盛有1.7升土壤、沙子和Bioplant®基质(1:1:1)混合物的花盆中进行,之前经过高压灭菌。每株大豆植株接种5000个肠杆菌卵。第一个实验75天后,第二个实验90天后,评估以下变量:胆囊指数(GI)、卵子质量指数(EMI)、每克根卵子总数(NEGR)和繁殖因子(RF)。两个小种在所有大豆基因型中都表现出繁殖能力(具有或不具有已知的遗传抗性),尽管与它们在番茄植株上的繁殖相比具有中等到较低的值。从统计数据来看,棉花品种比番石榴品种对大豆品种更具攻击性。在两个实验中,只有“BRS 7180 IPRO”对两个小种都具有中等抗性。鉴于扩大大豆作物的重要性和前景,本研究的结果有助于更好地了解两个小种M.enterolobii表现出的抗性和攻击性。此外,这项研究强调了在制定育种计划以选择对根结线虫具有多重抗性的大豆基因型方面面临的重大挑战。
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引用次数: 0
Molecular characterisation of the potato cyst nematode, Globodera ellingtonae Handoo et al., 2012 (Tylenchida: Heteroderidae) from Bolivia 马铃薯胞囊线虫的分子特征,Globodera ellingtonae Handoo等人,2012(Tylenchida:异脊线虫科),来自玻利维亚
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-08-01 DOI: 10.1163/15685411-bja10269
S. Subbotin, C. Sainz, Carmen L. Villarroel, J. Franco
In 2022, during potato cyst nematode surveys in several departments of Bolivia, the potato cyst nematode Globodera ellingtonae Handoo et al., 2012 was detected for the first time in Bolivia from potato fields located in the Department of Tarija. Cysts and second-stage juveniles of the Bolivian populations were morphologically and morphometrically similar to those of the USA (Oregon and Idaho) and Argentina. Nine new ITS rRNA, 15 COI, 13 cytb gene sequences of G. ellingtonae from ten Bolivian populations were obtained in this study. The phylogenetic analyses of the ITS rRNA and cytb genes showed that all Bolivian sequences clustered together and formed a major clade with other G. ellingtonae sequences from Argentina, Chile and the USA. Molecular results confirmed the hypothesis that the mountain region in southern Bolivia, northwest Argentina and northern Chile could be considered as an ancient centre of origin of G. ellingtonae. The present molecular results suggested that G. ellingtonae was likely introduced into the USA from Chile, rather than from Bolivia and Argentina.
2022年,在玻利维亚多个省的马铃薯囊肿线虫调查中,在玻利维亚Tarija省的马铃薯田首次发现了Globodera ellingtonae Handoo等,2012。玻利维亚种群的包囊和第二阶段幼鱼在形态和形态计量学上与美国(俄勒冈州和爱达荷州)和阿根廷的相似。从玻利维亚10个种群中获得了9个新的ITS rRNA、15个COI、13个cytb基因序列。ITS rRNA和cytb基因的系统发育分析表明,所有玻利维亚序列聚集在一起,与来自阿根廷、智利和美国的G. ellingtonae序列形成一个主进化支。分子结果证实了玻利维亚南部、阿根廷西北部和智利北部的山区可能被认为是G. ellingtonae的古代起源中心的假设。目前的分子结果表明,G. ellingtonae可能是从智利传入美国的,而不是从玻利维亚和阿根廷。
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引用次数: 0
Molecular characterisation and redescription of Ficophagus religiosus (Bajaj & Tomar, 2014) Davies & Bartholomaeus, 2015 from Ficus religiosa in India Ficogaus religiosus的分子表征和重新描述(Bajaj&Tomar,2014)Davies&Bartholomaeus,2015来自印度的Ficus religiosa
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-07-11 DOI: 10.1163/15685411-bja10264
Chandramani D. Waghmare, M. R. Khan, V. Somvanshi, Md Niraul Islam, Razia Sultana, Artha Kundu
A population of Ficophagus was discovered in the syconia of sacred fig (Ficus religiosa) grown in New Delhi (India). Based on morphology, morphometric characters and molecular data, we redescribed the population as Ficophagus religiosus. Here, major morphological characteristics are described in depth, with measurements of the male-female specimens’ taxonomic characters and photomicrography. Ficophagus religiosus can be easily identified by the spiral to J-spiral-shaped body, labial disc not offset, SE pore close to the base of the lip region, stylet length 17.7 (16-19) μm in males, and 19 (15-22) μm in females, a short post-uterine sac of length 8.3 μm (5-10 μm), a spicule with broad and high condylus, capitulum flat or depressed, a small bluntly rounded rostrum, the spicule tip (bluntly rounded or pointed), no cucullus, no gubernaculum, three pairs (P3, P3a, P4) of subventral caudal papillae, and broadly or bluntly rounded tail tip, without mucron. Additionally, new sequence data for the D2-D3 region of 28S rDNA (LSU) and 18S rDNA (SSU) marker genes are provided. Maximum likelihood and Bayesian methods were used to infer phylogenetic relationships of the Indian population of F. religiosus with other Ficophagus species. Phylogenetic analyses based on D2-D3 and SSU molecular markers resulted in a clear separation of F. religiosus from other Ficophagus species. The present study redescribes the species F. religiosus and provides molecular data to identify and establish phylogenetic relationships with other species.
在新德里(印度)生长的神圣无花果树(Ficus religiosa)中发现了大量的无花果。根据形态学、形态计量学特征和分子数据,我们将该种群重新定义为Ficophagus religiosus。在这里,通过对雄性和雌性标本分类特征的测量和显微照片,对主要的形态学特征进行了深入的描述。宗教性食道可以很容易地通过螺旋到J螺旋形的身体、唇盘不偏移、SE孔靠近唇区的基部、探针长度男性为17.7(16-19)μm,女性为19(15-22)μm、长度为8.3μm(5-10μm)的短子宫后囊、具有宽而高的髁突的针状物、小头扁平或凹陷、,穗状尖端(钝圆形或尖头),没有葫芦,没有引带,三对(P3,P3a,P4)尾下乳头,和宽或钝圆形的尾尖,没有短尖头。此外,还提供了28S rDNA(LSU)和18S rNA(SSU)标记基因的D2-D3区的新序列数据。利用最大似然和贝叶斯方法推断印度宗教F.religiosus种群与其他食Ficophagus物种的系统发育关系。基于D2-D3和SSU分子标记的系统发育分析结果表明,宗教F.religiosus与其他Ficophagus物种明显分离。本研究重新描述了宗教F.religiosus物种,并为识别和建立与其他物种的系统发育关系提供了分子数据。
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引用次数: 0
Description of Ektaphelenchus phoenicis n. sp. (Rhabditida: Ektaphelenchinae), a morphological and molecular phylogenetic study 文章标题腓大鼠的形态与分子系统发育研究(横纹肌目:腓大鼠科)
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-23 DOI: 10.1163/15685411-bja10263
Mojtaba Keramat, Zeinab Mahboubi, M. R. Atighi, E. Pourjam, J. Abolafia, Saif Abdulhussin Alghanimi, M. Pedram
A new species of Ektaphelenchinae was recovered from the bark of a dead date palm (Phoenix dactylifera) tree, and from a soil sample collected from the rhizosphere of gramineous grasses in Iraq and Iran, respectively. It was assigned to the genus Ektaphelenchus mainly by the lack of a functional anus and rectum, and having a conical posterior body end (tail) in female, not ending to a filiform tip, and males lacking a bursa. The recovered populations were described based on morphological and molecular data. Ektaphelenchus phoenicis n. sp. is characterised by 346-441 μm long females, having three lines in lateral field, a 12.3-15.8 μm long stylet with wide lumen lacking basal knobs or swellings, high lip region separated from the rest of body by a depression, metacorpus elliptical with refractive valve plates almost in the middle to slightly posterior, excretory pore posterior to metacorpus, postvulval uterine sac (PUS) 9.3-14.8 μm long, usually containing sperm, posterior body end (tail) with ventrally bent distal end, males common in population with seven precloacal + cloacal + caudal papillae and slightly elevated cloacal lips under SEM, appearing as a differentiated flap-like structure under LM. The new species was morphologically compared with typologically similar species of Ektaphelenchus with a similar body size, namely: E. golestanicus, E. oleae and E. taiwanensis; a similar female posterior body end, namely: E. cupressi, E. kanzakii, E. prolobos and E. riograndensis; and E. goffarti having a similar postcloacal structure. The phylogenetic relationships of the new species with other relevant genera and species were reconstructed using near full length sequences of small and D2-D3 expansion segments of large subunit (SSU and LSU D2-D3) rDNA. In both inferred phylogenies, the newly generated sequences of Ektaphelenchus phoenicis n. sp. occupied a placement inside a maximally supported clade including sequences of three genera Ektaphelenchus, Ektaphelenchoides and Devibursaphelenchus.
从一棵死椰枣树的树皮和分别从伊拉克和伊朗的禾本科植物根际采集的土壤样本中发现了一个新的Ektaphelenchinae物种。它之所以被归入Ektaphelenchus属,主要是因为它缺乏功能性的肛门和直肠,雌性有一个圆锥形的身体后端(尾巴),没有末端到丝状尖端,雄性缺乏囊。根据形态学和分子数据对恢复的种群进行了描述。Ektaphelenchus phoenicis n.sp.的特征是346-41μm长的雌性,在侧视野中有三条线,12.3-15.8μm长管心针,管腔宽,没有基底结节或肿胀,高唇区通过凹陷与身体其他部分隔开,中心体椭圆形,折射阀板几乎在中心体的中间至稍后,中心体内有排泄孔,外阴后子宫囊(PUS)长9.3-14.8μm,通常含有精子,体后端(尾部)远端腹侧弯曲,SEM下男性常见,有7个阴道前+阴沟+尾乳头,阴沟唇略高,LM下呈分化的片状结构。将该新种与体型相似的Ektaphelenchus的形态相似种进行了比较,即:E.golestanicus、E.oleae和E.taiwanensis;一个类似的雌性后体末端,即:库佩西E.cupessi、坎崎E.kanzakii、Prorobos E.riograndensis;和具有相似的后循环结构的E.goffarti。利用大亚基(SSU和LSU D2-D3)rDNA的小片段和D2-D3扩增片段的近全长序列,重建了该新种与其他相关属和种的系统发育关系。在这两个推断的系统发育中,新生成的Ektaphelenchus phoenicis n.sp.序列位于一个最大支持的分支中,包括Ektapherenchus、Ektaphenenchoides和Devibursaphelenchus三个属的序列。
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引用次数: 0
Impact of cover crops on population density of the root-knot nematode Meloidogyne chitwoodi 覆盖作物对根结线虫种群密度的影响
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-20 DOI: 10.1163/15685411-bja10262
L. Taning, Eleni K. Tafes, S. Fleerakkers, L. Lippens, E. Formesyn, L. Tirry, W. Wesemael
Management strategies applied to reduce Meloidogyne chitwoodi populations below economic damage threshold depend strongly on measures taken during the intercrop period. Therefore, this study evaluated the reproductive potentials of M. chitwoodi on different cultivars of cover crops. Twenty-two different cultivars were evaluated against M. chitwoodi at low and high initial inoculum density in a pot experiment under controlled conditions. Fallow was used as control. Based on the reproductive factor, the cover crops were classified under five different categories: Non-host, Poor host, Maintenance host, Good host and Excellent host. In this study, at both low (10 second-stage juveniles (J2) 100 cm−3 soil) and high (100 J2 100 cm−3 soil) initial inoculum density of M. chitwoodi, fodder radish ‘Maximus’, ‘Contra’, ‘Dacapo’ and ‘Defender’, Italian ryegrass ‘Meroa’, rye ‘Matador’ and bird’s foot trefoil ‘Barguay’, ‘Franco’ and ‘Lotar’ were considered poor hosts reducing the M. chitwoodi population in the pot test based on reproductive factor (RF) values. Field experiments were carried out that confirmed most of our results in the pot experiments. However, the field experiments showed that the rotations in which the cover crops are implemented are influenced by weather conditions, previous crop grown, their growing period and initial population densities. Based on our findings, selected non- and poor-host cover crops could be recommended for integrated management of M. chitwoodi.
将吉木螺种群减少到经济损失阈值以下的管理策略在很大程度上取决于间作期间采取的措施。因此,本研究评价了chitwoodi在不同覆盖作物品种上的繁殖潜力。在盆栽试验条件下,对22个不同品种在低、高初始接种密度条件下对赤木霉的抗性进行了评价。休耕作为对照。根据繁殖因子将覆盖作物分为非寄主、不良寄主、维持寄主、良好寄主和优良寄主5类。在本研究中,在低初始接种密度(10个第二阶段幼体(J2) 100 cm−3土壤)和高初始接种密度(100 J2 100 cm−3土壤)条件下,根据繁殖因子(RF)值,在盆栽试验中,饲料萝卜‘Maximus’、‘Contra’、‘Dacapo’和‘Defender’、意大利黑麦草‘Meroa’、黑麦‘Matador’和鸟脚三叶草‘Barguay’、‘Franco’和‘Lotar’被认为是降低chitwoodi种群的不良寄主。田间试验证实了盆栽试验的大部分结果。然而,田间试验表明,覆盖作物的轮作受天气条件、前茬作物、生长期和初始种群密度的影响。根据我们的研究结果,可以推荐经选择的非寄主和差寄主覆盖作物用于chitwoodi的综合管理。
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引用次数: 0
Isolation of Sheraphelenchus sucus from Epuraea (Haptoncus) ocularis collected from an Anoplolepis gracilipes nest in Okinawa, Japan 日本冲绳县长尾按蚊巢中斑点斑蝽的分离
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-15 DOI: 10.1163/15685411-bja10261
N. Kanzaki, Yuta Fujimori, K. Hamaguchi
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引用次数: 0
Detection and description of Ditylenchus israelensis n. sp. (Nematoda: Anguinidae) from bulbs of the Persian buttercup (Ranunculus asiaticus L.) 从波斯毛茛(Ranunculus asiaticus L.)球茎中发现以色列二齿线虫(diylenchus israelensis n. sp.)(线虫纲:鳗科)
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-12 DOI: 10.1163/15685411-bja10260
J. Gu, Xinxin Ma, P. Castillo, M. Munawar
The present study describes a new Ditylenchus species, isolated from the bulbs of the Persian buttercup (Ranunculus asiaticus L.) imported from Israel at the Ningbo plant quarantine lab, Ningbo, P.R. China. Ditylenchus israelensis n. sp. is an amphimictic species; females have six incisures in the lateral field, a long and slim body, a delicate, short stylet (7-8 μm) with small and rounded knobs, excretory pore in the anterior region of the basal pharyngeal bulb, posteriorly located vulva (V = 78.6-83.1), a short PUS (15.0-24.0 μm), and a long conical tail with a pointed terminus. Males are similar to females in general morphology and have 14.0-18.0 μm long spicules. The new species was also characterised molecularly using 18S, ITS and D2-D3 expansion segments of 28S rDNA genes. Our phylogenetic analyses showed its independent position among available Ditylenchus species and a close phylogenetic affinity with D. valveus. Several Ditylenchus species are regulated pests; their detection in a given sample can implement quarantine measures. However, to our knowledge D. israelensis n. sp. did not cause any damage to the R. asiaticus bulbs. In addition, future studies regarding fecundity and host association may shed some light on the pathogenic potential of D. israelensis n. sp.
本文报道了从以色列进口的波斯毛茛(Ranunculus asiaticus L.)球茎中分离到的一个新属。以色列双翅虫属(diylenchus israelensis n. sp.)是一两性生种;雌性有6个外侧切口,身体长而纤细,花柱纤细而短(7-8 μm),柄小而圆,在咽球基部前部有排泄孔,外阴位于后部(V = 78.6-83.1),脓液短(15.0-24.0 μm),尾长圆锥形,末端尖。雄性与雌性形态相似,针状体长14.0 ~ 18.0 μm。利用28S rDNA基因的18S、ITS和D2-D3扩增段对新种进行了分子表征。系统发育分析表明其在现有的双叶龙种中具有独立的地位,并与D. valveus有密切的系统发育亲缘关系。几种二叉蝇属受管制害虫;在给定样本中检测到它们可以实施检疫措施。然而,据我们所知,以色列剑齿虎对亚洲小茴香球茎没有造成任何损害。此外,未来关于繁殖能力和寄主关联的研究可能会对以色列家蝇的致病潜力有所帮助。
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引用次数: 0
Mesorhabditis sudafricana n. sp. (Rhabditida, Mesorhabditidae), a new species with a short tail from South Africa 苏africana n. sp.(横纹肌目,横纹肌科),一新种,短尾,产自南非
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.1163/15685411-bja10254
E. Shokoohi, J. Abolafia, A. Swart, N. Moyo, J. Eisenback
During a survey of soil nematodes in 2022, a free-living bacterivorous nematode, described here as Mesorhabditis sudafricana n. sp., was discovered in association with kikuyu grass in Limpopo Province, South Africa. The new species was distinguished by a relatively long body (716-815 μm in females and 605-689 μm in males), long spicules (61-66 μm), and gubernaculum (22-24 μm) and a short tail (15-20 μm in females and 18-21 μm in males). The vulva is positioned posteriad (93-95% of body length), and the distance from vulva to anus is long (1.5-1.9 times tail length). Additionally, the new species bears seven lateral field incisures and a peloderan bursa with the genital papillae in arrangement 2/3+ph+1+3, being two precloacal and eight postcloacal. The 28S rDNA BlastN showed 94% similarity with an unidentified Mesorhabditis (deposited as Bursilla (EF990722). By contrast, the ITS rDNA BlastN showed 82% similarity with Mesorhabditis paucipapillata (MT710243). The phylogenetic analysis of 28S and ITS rDNA placed the new species separately from the other Mesorhabditis. Description, measurements, illustrations and SEM micrographs for M. sudafricana n. sp. are provided.
在2022年的一次土壤线虫调查中,在南非林波波省发现了一种与菊苣草有关的自由生活的食菌线虫,在这里被描述为南非中杆线虫。新物种的特征是相对较长的身体(雌性716-815μm,雄性605-689μm)、长针状物(61-66μm)和引带(22-24μm)以及短尾巴(雌性15-20μm,男性18-21μm)。外阴位于后方(体长的93-95%),外阴到肛门的距离较长(尾部长度的1.5-1.9倍)。此外,该新种有7个侧野切迹和一个peloderan囊,其生殖乳头排列为2/3+ph+1+3,分别为两个阴道前和八个阴道后。28S rDNA BlastN与一种未鉴定的中横纹肌炎(以Bursila(EF990722)保藏)显示出94%的相似性。相比之下,ITS rDNA BlastN显示出82%的相似性,与贫中横纹肌炎(MT710243)。28S和ITS rDNA的系统发育分析将该新种与其他中横纹肌炎分开。提供了南非乳杆菌的描述、测量、插图和SEM显微照片。
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引用次数: 0
Two new species of sedentary nematodes of the genus Meloidodera Chitwood, Hannon & Esser, 1956 (Tylenchida: Heteroderidae) from Mexico 墨西哥扁脊线虫属两新种,Hannon&Esser,1956(扁脊线虫:异脊线虫科)
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.1163/15685411-bja10259
I. Cid del Prado Vera, S. Subbotin
Two new species of the genus Meloidodera collected in Mexico are described here: M. ferrisi sp. n. parasitising roots of an oak tree in the State of Mexico and M. tecoacensis sp. n. parasitising roots of buffalo bur nightshade in the Tlaxcala State. Meloidodera ferrisi sp. n. is characterised by a spherical female body covered completely by a dark thick cuticular layer, length/width of the female body = 0.8-1.6, stylet = 35-43 μm and second-stage juvenile with average body = 340 μm and average tail length = 35.6 μm. Meloidodera tecoacensis sp. n. is characterised by the female having a spherical body covered with a yellow transparent material, length/width of the female body = 1.1-2.8, stylet = 20-33 μm and second-stage juvenile with average body = 340 μm and average tail length = 29.8 μm. These two species were molecularly characterised using the D2-D3 expansion segments of 28S rRNA, ITS rRNA and COI gene sequences. Phylogenetic analysis revealed that the two new species represent a separate evolutionary lineage within the subfamily Meloidoderinae. An identification key for 12 Meloidodera species is provided.
本文描述了在墨西哥采集的Meloidodera属的两个新种:寄生在墨西哥州橡树根上的M.ferrisi sp.n和寄生在特拉斯卡拉州睡莲根上的M.tecoacensis sp.n。铁球藻(Meloidodera ferrisi sp.n.)的特征在于完全被深色厚角质层覆盖的球形雌性身体、雌性身体的长度/宽度=0.8-1.6,管心针=35-43μm,第二期幼鱼平均体长=340μm,平均尾长=35.6μm。墨西哥瓜的特征是雌性的球形身体覆盖着黄色透明材料,雌性身体的长度/宽度=1.1-2.8,使用28S rRNA、ITS rRNA和COI基因序列的D2-D3扩增片段对这两个物种进行了分子表征。系统发育分析表明,这两个新物种代表了蜜瓜亚科中一个独立的进化谱系。提供了12个甜瓜属物种的鉴定密钥。
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引用次数: 0
New genotyping rescues old phenotypes: beneficial traits in Heterorhabditis bacteriophora wild type material and association to single nucleotide polymorphisms 新的基因分型拯救了旧的表型:异habditis bacteriophora野生型材料的有益性状及其与单核苷酸多态性的关联
IF 1.2 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.1163/15685411-bja10255
Giulia Godina, B. Vandenbossche, A. Centurión, Verena Dörfler, Mike Barg, R. Ehlers, C. Molina
The entomopathogenic nematode (EPN), Heterorhabditis bacteriophora, is a biocontrol agent with almost world-wide distribution, thus providing a huge source of biodiversity available for exploitation in breeding programmes to improve beneficial traits. For management of economically important insect pests, the nematode is mass-produced in liquid culture, formulated with inert carriers, and transported under controlled temperature conditions to maintain its quality. The biocontrol potential of nematode materials is defined by their genetic background. Previous reports have assessed the phenotypic plasticity of H. bacteriophora. Major beneficial traits are field efficacy influenced by their virulence, longevity and field persistence and tolerance to abiotic stresses like oxidative stress, desiccation and extreme low and high temperatures. For several of these traits high heritability values (h2) have been reported, providing a platform for trait improvement by selection. Modern breeding uses molecular markers to track beneficial traits. Recent studies reported hundreds of single nucleotide polymorphisms (SNPs) in H. bacteriophora. This investigation revived a large set of cryopreserved wild types, hybrids and phenotyped materials of H. bacteriophora. Additional phenotypic data on the virulence (LC50) of H. bacteriophora strains against mealworm (Tenebrio molitor) were produced ranging from 1.4 ± 0.3 to 8.0 ± 3.6 nematodes per insect. Markers linked to beneficial traits were used for a comprehensive genotype analysis transferring reported SNP sequence information into the multiplex platform SeqSNP. Specific alleles associated to beneficial traits were identified and 65 materials were classified for the presence of relevant SNPs associated to beneficial traits. This information provides a valuable platform for exploitation of the nematode’s biodiversity for future breeding and selection approaches.
昆虫病原线虫(Heterorhabditis bacteriophora)是一种几乎世界范围内分布的生物防治剂,因此为育种计划提供了巨大的生物多样性来源,可用于改善有益性状。为了管理经济上重要的害虫,线虫在液体培养中大量生产,用惰性载体配制,并在受控的温度条件下运输,以保持其质量。线虫材料的生物防治潜力是由它们的遗传背景决定的。以前的报告已经评估了嗜菌杆菌的表型可塑性。主要的有益性状是田间药效,受其毒力、寿命和田间持久性以及对氧化胁迫、干燥和极低温和高温等非生物胁迫的耐受性的影响。其中一些性状的高遗传力值(h2)已被报道,为通过选择进行性状改良提供了平台。现代育种使用分子标记来追踪有益的性状。最近的研究报道了数百个单核苷酸多态性(SNPs)。这项研究恢复了大量冷冻保存的野生型、杂交型和表型材料。结果表明,嗜杆菌H. bacteriophora菌株对粉虫(tenbrio molitor)的毒力LC50在1.4±0.3 ~ 8.0±3.6线虫/虫之间。利用与有益性状相关的标记进行全面的基因型分析,将报告的SNP序列信息转移到多重平台SeqSNP中。鉴定出与有益性状相关的特定等位基因,并根据存在与有益性状相关的snp对65份材料进行分类。这些信息为利用线虫的生物多样性为未来的育种和选择方法提供了有价值的平台。
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引用次数: 1
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Nematology
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