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Advancing single-cell omics and cell-based therapeutics with quantum computing. 利用量子计算推进单细胞组学和基于细胞的治疗。
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2026-01-02 DOI: 10.1038/s41580-025-00918-0
Aritra Bose, Kahn Rhrissorrakrai, Filippo Utro, Laxmi Parida

The generation of highly accurate models of behaviours of individual cells and cell populations through integration of high-resolution assays with advanced computational tools would transform precision medicine. Recent breakthroughs in single-cell and spatial transcriptomics and multi-omics technologies, coupled with artificial intelligence, are driving rapid progress in model development. Complementing the advances in artificial intelligence, quantum computing is maturing as a novel compute paradigm that may offer potential solutions to overcome the computational bottlenecks inherent to capturing cellular dynamics. In this Roadmap article, we discuss the advancements and challenges in spatiotemporal single-cell analysis, explore the possibility of quantum computing to address the challenges and present a case study on how quantum computing may be integrated into cell-based therapeutics. The specific confluence of quantum and classical computing with high-resolution assays may offer a crucial path towards the generation of transformative models of cellular behaviours and perturbation responses.

通过将高分辨率分析与先进的计算工具相结合,生成个体细胞和细胞群体的高度精确的行为模型,将改变精准医学。单细胞、空间转录组学和多组学技术的最新突破,加上人工智能,正在推动模型开发的快速进展。与人工智能的进步相辅相成,量子计算作为一种新的计算范式正在成熟,它可能为克服捕获细胞动力学固有的计算瓶颈提供潜在的解决方案。在这篇路线图文章中,我们讨论了时空单细胞分析的进展和挑战,探讨了量子计算解决这些挑战的可能性,并提出了一个关于量子计算如何整合到基于细胞的治疗方法中的案例研究。量子计算和经典计算与高分辨率分析的具体融合可能为生成细胞行为和扰动响应的转换模型提供重要途径。
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引用次数: 0
Biology and therapeutic potential of extracellular vesicle targeting and uptake. 细胞外囊泡靶向和摄取的生物学和治疗潜力。
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2026-01-02 DOI: 10.1038/s41580-025-00922-4
Léa Ripoll, Antje M Zickler, Pieter Vader, Samir El Andaloussi, Frederik J Verweij, Guillaume van Niel

Extracellular vesicles (EVs) have gained significant attention owing to their role in pathophysiological processes and potential as therapeutic tools. EVs are small vesicles (30 nm-5 µm) containing specific cargo (proteins, nucleic acids and lipids) and are released from most cell types. Their capacity to target and induce phenotypical changes in recipient cells has established them as key mediators of intercellular communication. Although EV biogenesis is well studied, their uptake and fate in recipient cells are still poorly understood. In this Review, we focus on the cell biology underlying EV interactions with recipient cells and their intracellular fate. We discuss the mechanisms EVs use to achieve cell-specific targeting, cell signalling and functional cargo delivery and list the key challenges currently limiting our ability to harness these EVs into efficient therapeutic nanovehicles. We explore how our understanding of the molecular mechanisms supporting interactions of EVs with recipient cells and their functions herein can provide new strategies to use them for therapeutic approaches.

细胞外囊泡(EVs)由于其在病理生理过程中的作用和作为治疗工具的潜力而受到了极大的关注。ev是含有特定货物(蛋白质、核酸和脂质)的小囊泡(30 nm-5µm),可以从大多数细胞类型中释放出来。它们靶向和诱导受体细胞表型变化的能力使它们成为细胞间通讯的关键介质。虽然EV的生物发生机制已经得到了很好的研究,但它们在受体细胞中的摄取和命运仍然知之甚少。在这篇综述中,我们主要关注EV与受体细胞相互作用及其细胞内命运的细胞生物学基础。我们讨论了电动汽车用于实现细胞特异性靶向,细胞信号传导和功能性货物递送的机制,并列出了目前限制我们利用这些电动汽车成为有效治疗纳米车辆的能力的关键挑战。我们探索了我们对支持ev与受体细胞相互作用的分子机制及其功能的理解如何为它们的治疗方法提供新的策略。
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引用次数: 0
Organization of replicated chromosomes by DNA loops and sister chromatid cohesion. 通过DNA环和姐妹染色单体内聚来组织复制染色体。
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2026-01-02 DOI: 10.1038/s41580-025-00933-1
Fena Ochs, Daniel W Gerlich

Cohesin is a key regulator of three-dimensional genome organization, contributing to gene regulation, recombination, DNA repair and chromosome segregation. Like other members of the evolutionary conserved structural maintenance of chromosomes (SMC) protein-complex family, cohesin folds DNA through motor-driven loop extrusion. Cohesin has a unique, second activity of genome organization: it physically links sister chromatids together in replicated chromosomes, a process termed sister chromatid cohesion. Sister chromatid cohesion and loop extrusion are mediated by two distinct pools of cohesin, which share common core subunits, but associate with distinct regulatory subunits to interact with chromosomes in fundamentally different ways. In this Review, we discuss how sister chromatid cohesion is established and regulated, and how an interplay between cohesion and chromatin loops organizes replicated chromosomes. We also discuss how cohesion supports chromosome segregation in mitosis and meiosis, and how it contributes to DNA double-strand break repair and age-related oocyte aneuploidy. We outline recent technological advances that provide new opportunities to study cohesion and the conformation of replicated chromosomes, and we provide a perspective on how these tools might be applied to answer fundamental questions in cohesin biology.

内聚蛋白是三维基因组组织的关键调控因子,参与基因调控、重组、DNA修复和染色体分离。与进化保守结构维持染色体(SMC)蛋白复合体家族的其他成员一样,内聚蛋白通过马达驱动的环挤压折叠DNA。内聚蛋白在基因组组织中具有独特的第二种活性:它将复制染色体中的姐妹染色单体物理地连接在一起,这一过程称为姐妹染色单体内聚。姐妹染色单体内聚和环挤出是由两种不同的内聚蛋白介导的,它们具有共同的核心亚基,但与不同的调节亚基相关联,以根本不同的方式与染色体相互作用。在这篇综述中,我们讨论了姐妹染色单体内聚是如何建立和调节的,以及内聚和染色质环之间的相互作用是如何组织复制染色体的。我们还讨论了内聚如何在有丝分裂和减数分裂中支持染色体分离,以及它如何促进DNA双链断裂修复和年龄相关的卵母细胞非整倍体。我们概述了最近的技术进步,为研究内聚和复制染色体的构象提供了新的机会,并提供了如何应用这些工具来回答内聚生物学中的基本问题的观点。
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引用次数: 0
Space travel affects haematopoietic stem cells 太空旅行会影响造血干细胞。
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-12-08 DOI: 10.1038/s41580-025-00941-1
Kim Baumann
Jamieson and colleagues report the effects of spaceflight on haematopoietic stem and progenitor cells isolated from astronauts.
贾米森和他的同事报告了太空飞行对从宇航员身上分离的造血干细胞和祖细胞的影响。
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引用次数: 0
Developmental triggers of microRNA decay microRNA衰变的发育触发因素
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-12-05 DOI: 10.1038/s41580-025-00937-x
Eytan Zlotorynski
Target-directed miRNA degradation through interaction with non-coding parts of mRNAs is required for proper mammalian development.
通过与mrna的非编码部分相互作用,靶向miRNA降解是哺乳动物正常发育所必需的。
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引用次数: 0
Fatty acid signalling promotes hair regrowth 脂肪酸信号促进头发再生
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-12-04 DOI: 10.1038/s41580-025-00939-9
Kim Baumann
Following skin injury, macrophages infiltrate the adipose tissue, promoting adipocyte lipolysis, and the released fatty acids induce hair regrowth by activating hair follicle stem cells.
皮肤损伤后,巨噬细胞浸润脂肪组织,促进脂肪细胞脂解,释放的脂肪酸通过激活毛囊干细胞诱导毛发再生。
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引用次数: 0
A lunapark for secretory mRNA translation at ER junctions 内质网连接处分泌性mRNA翻译的月球公园
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-12-04 DOI: 10.1038/s41580-025-00938-w
Lisa Heinke
The transmembrane protein lunpark is enriched at endoplasmic reticulum junctions where it acts as an organization hub, integrating translation initiation control with nutrient sensing through association with lysosomes.
跨膜蛋白lunpark在内质网连接处富集,在那里它作为组织中心,通过与溶酶体的关联将翻译起始控制与营养感知结合起来。
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引用次数: 0
Critical constituents and assembly principles of centriole biogenesis in human cells 人细胞中中心粒生物发生的关键成分和组装原理
IF 112.7 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-11-27 DOI: 10.1038/s41580-025-00921-5
Pierre Gönczy
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引用次数: 0
Challenges and potential applications of AI in systems biology 人工智能在系统生物学中的挑战和潜在应用
IF 90.2 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-11-27 DOI: 10.1038/s41580-025-00934-0
Na Sun
Artificial intelligence (AI) offers new opportunities to model inter-organ communication and systemic biology. Integrating experimental advances with computational modelling presents key challenges, and here I propose future directions for building predictive, interpretable and generative frameworks that bridge molecular data to organism-level insights. In this Comment, Na Sun explores how artificial intelligence-driven methodologies are poised to transform systems biology, particularly in the realm of tissue modelling, and outlines the key challenges that must be overcome to enable the development of truly predictive biological systems.
人工智能(AI)为模拟器官间通讯和系统生物学提供了新的机会。将实验进展与计算建模相结合提出了关键的挑战,在这里,我提出了构建预测、可解释和生成框架的未来方向,这些框架将分子数据与生物水平的见解联系起来。在这篇评论中,Na Sun探讨了人工智能驱动的方法如何准备改变系统生物学,特别是在组织建模领域,并概述了必须克服的关键挑战,以实现真正可预测的生物系统的发展。
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引用次数: 0
Like water on rock, the microenvironment bends stem cell fate 就像岩石上的水一样,微环境改变了干细胞的命运
IF 112.7 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-11-27 DOI: 10.1038/s41580-025-00935-z
Shiri Gur-Cohen
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引用次数: 0
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