首页 > 最新文献

NMR in Biomedicine最新文献

英文 中文
Depth-wise multiparametric assessment of articular cartilage layers with single-sided NMR. 利用单面核磁共振对关节软骨层进行深度多参数评估
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-11-07 DOI: 10.1002/nbm.5287
Carlo Golini, Marco Barbieri, Anastasiia Nagmutdinova, Villiam Bortolotti, Claudia Testa, Leonardo Brizi

Articular cartilage (AC) is a specialized connective tissue that covers the ends of long bones and facilitates the load-bearing of joints. It consists of chondrocytes distributed throughout an extracellular matrix and organized into three zones: superficial, middle, and deep. Nuclear magnetic resonance (NMR) techniques can be used to characterize this layered structure. In this study, devoted to a better understanding of the NMR response of this complex tissue, 20 specimens excised from femoral and tibial cartilage of bovine samples were analyzed by the low-field single-sided NMR-MOUSE-PM10. A multiparametric depth-wise analysis was performed to characterize the laminar structure of AC and investigate the origin of the NMR dependence on depth. The depth dependence of the single parameters T1, T2, and D has been described in literature, but their simultaneous measurement has not been fully exploited yet, as well as the extent of their variability. A novel parameter, α, evaluated by applying a double-quantum-like sequence, has been measured. The significant decrease in T1, T2, and D from the middle to the deep zone is consistent with depth-dependent composition and structure changes of the complex matrix of fibers confining and interacting with water. The α parameter appears to be a robust marker of the layered structure with a well-reproducible monotonic trend across the zones. The discrimination of cartilage zones was reinforced by a multivariate principal component analysis statistical analysis. The large number of samples allowed for the identification of the smallest number of parameters or their combination able to classify samples. The first two components clustered the data according to the different zones, highlighting the sensitivity of the NMR parameters to the structural and compositional variations of AC. Using two parameters, the best result was obtained by considering T1 and α. Single-sided NMR devices, portable and low-cost, provide information on NMR parameters related to tissue composition and structure.

关节软骨(AC)是一种特殊的结缔组织,覆盖在长骨的末端,有助于关节的承重。它由分布在细胞外基质中的软骨细胞组成,分为表层、中层和深层三个区域。核磁共振(NMR)技术可用于描述这种分层结构。为了更好地了解这种复杂组织的核磁共振响应,本研究采用低场单面核磁共振-MOUSE-PM10 分析了从牛股骨和胫骨软骨上切除的 20 个标本。进行了多参数深度分析,以确定 AC 层状结构的特征,并研究 NMR 深度依赖性的起源。单一参数 T1、T2 和 D 的深度依赖性在文献中已有描述,但它们的同步测量及其变化程度尚未得到充分利用。我们测量了一个新参数α,它是通过应用双量子样序列来评估的。从中层到深层,T1、T2 和 D 显著下降,这与限制水和与水相互作用的复杂纤维基质的成分和结构随深度变化而变化是一致的。α参数似乎是分层结构的可靠标记,在各区具有良好的单调趋势。多变量主成分分析统计分析加强了对软骨区的区分。由于样本数量众多,因此可以确定能够对样本进行分类的最小参数数量或参数组合。前两个成分根据不同区域对数据进行了分组,突出了核磁共振参数对 AC 结构和成分变化的敏感性。单面核磁共振设备便于携带且成本低廉,可提供与组织成分和结构相关的核磁共振参数信息。
{"title":"Depth-wise multiparametric assessment of articular cartilage layers with single-sided NMR.","authors":"Carlo Golini, Marco Barbieri, Anastasiia Nagmutdinova, Villiam Bortolotti, Claudia Testa, Leonardo Brizi","doi":"10.1002/nbm.5287","DOIUrl":"10.1002/nbm.5287","url":null,"abstract":"<p><p>Articular cartilage (AC) is a specialized connective tissue that covers the ends of long bones and facilitates the load-bearing of joints. It consists of chondrocytes distributed throughout an extracellular matrix and organized into three zones: superficial, middle, and deep. Nuclear magnetic resonance (NMR) techniques can be used to characterize this layered structure. In this study, devoted to a better understanding of the NMR response of this complex tissue, 20 specimens excised from femoral and tibial cartilage of bovine samples were analyzed by the low-field single-sided NMR-MOUSE-PM10. A multiparametric depth-wise analysis was performed to characterize the laminar structure of AC and investigate the origin of the NMR dependence on depth. The depth dependence of the single parameters T<sub>1</sub>, T<sub>2</sub>, and D has been described in literature, but their simultaneous measurement has not been fully exploited yet, as well as the extent of their variability. A novel parameter, α, evaluated by applying a double-quantum-like sequence, has been measured. The significant decrease in T<sub>1</sub>, T<sub>2</sub>, and D from the middle to the deep zone is consistent with depth-dependent composition and structure changes of the complex matrix of fibers confining and interacting with water. The α parameter appears to be a robust marker of the layered structure with a well-reproducible monotonic trend across the zones. The discrimination of cartilage zones was reinforced by a multivariate principal component analysis statistical analysis. The large number of samples allowed for the identification of the smallest number of parameters or their combination able to classify samples. The first two components clustered the data according to the different zones, highlighting the sensitivity of the NMR parameters to the structural and compositional variations of AC. Using two parameters, the best result was obtained by considering T<sub>1</sub> and α. Single-sided NMR devices, portable and low-cost, provide information on NMR parameters related to tissue composition and structure.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5287"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602265/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142591264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Stimulated echo acquisition mode (STEAM) diffusion tensor imaging with different diffusion encoding times in the supraspinatus muscle: Test-retest reliability and comparison to spin echo diffusion tensor imaging. 不同弥散编码时间的刺激回波采集模式(STEAM)冈上肌弥散张量成像:测试-重复可靠性以及与自旋回波弥散张量成像的比较。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-10-24 DOI: 10.1002/nbm.5279
Adrian Alexander Marth, Stefan Sommer, Thorsten Feiweier, Reto Sutter, Daniel Nanz, Constantin von Deuster

Diffusion tensor imaging (DTI) provides insight into the skeletal muscle microstructure and can be acquired using a stimulated echo acquisition mode (STEAM)-based approach to quantify time-dependent tissue diffusion. This study examined diffusion metrics and signal-to-noise ratio (SNR) in the supraspinatus muscle obtained with a STEAM-DTI sequence with different diffusion encoding times (Δ) and compared them to measures from a spin echo (SE) sequence. Ten healthy subjects (mean age 31.5 ± 4.7 years; five females) underwent 3-Tesla STEAM and SE-DTI of the shoulder in three sessions. STEAM was acquired with Δ of 100/200/400/600 ms. The diffusion encoding time in SE scans was 19 ms (b = 500 s/mm2). Region of interest-based measurement of fractional anisotropy (FA), mean diffusivity (MD), and SNR was performed. Intraclass correlation coefficients (ICCs) were computed to assess test-retest reliability. ANOVA with post-hoc pairwise tests was used to compare measures between different Δ of STEAM as well as STEAM and SE, respectively. FA was significantly higher (FASTEAM: 0.38-0.46 vs. FASE: 0.26) and MD significantly lower (MDSTEAM: 1.20-1.33 vs. MDSE: 1.62 × 10-3 mm2/s) in STEAM compared to SE (p < 0.001, respectively). SNR was significantly higher for SE (72.3 ± 8.7) than for STEAM (p < 0.001). ICCs were excellent for FA in STEAM (≥0.911) and SE (0.960). For MD, ICCs were good for STEAM100ms-600ms (≥0.759) and SE (0.752). STEAM and SE exhibited excellent reliability for FA and good reliability for MD in the supraspinatus muscle. SNR was significantly higher in SE compared to STEAM.

弥散张量成像(DTI)有助于深入了解骨骼肌的微观结构,可采用基于刺激回波采集模式(STEAM)的方法来量化随时间变化的组织弥散。本研究考察了使用不同扩散编码时间(Δ)的 STEAM-DTI 序列获得的冈上肌扩散指标和信噪比(SNR),并将其与自旋回波(SE)序列的测量结果进行了比较。十名健康受试者(平均年龄 31.5 ± 4.7 岁;五名女性)分三次接受了肩部的 3-Tesla STEAM 和 SE-DTI 检查。STEAM的Δ为100/200/400/600 ms。SE 扫描的扩散编码时间为 19 ms(b = 500 s/mm2)。对分数各向异性(FA)、平均扩散率(MD)和信噪比进行了基于感兴趣区的测量。计算类内相关系数(ICC)以评估测试-再测试的可靠性。方差分析和事后配对检验分别用于比较 STEAM 不同 Δ 之间以及 STEAM 和 SE 之间的测量结果。与 SE(p 100ms-600ms (≥0.759) 和 SE (0.752))相比,STEAM 的 FA 明显更高(FASTEAM: 0.38-0.46 vs. FASE: 0.26),MD 明显更低(MDSTEAM: 1.20-1.33 vs. MDSE: 1.62 × 10-3 mm2/s)。STEAM 和 SE 对冈上肌的 FA 显示出极佳的可靠性,对冈上肌的 MD 显示出良好的可靠性。与 STEAM 相比,SE 的信噪比明显更高。
{"title":"Stimulated echo acquisition mode (STEAM) diffusion tensor imaging with different diffusion encoding times in the supraspinatus muscle: Test-retest reliability and comparison to spin echo diffusion tensor imaging.","authors":"Adrian Alexander Marth, Stefan Sommer, Thorsten Feiweier, Reto Sutter, Daniel Nanz, Constantin von Deuster","doi":"10.1002/nbm.5279","DOIUrl":"10.1002/nbm.5279","url":null,"abstract":"<p><p>Diffusion tensor imaging (DTI) provides insight into the skeletal muscle microstructure and can be acquired using a stimulated echo acquisition mode (STEAM)-based approach to quantify time-dependent tissue diffusion. This study examined diffusion metrics and signal-to-noise ratio (SNR) in the supraspinatus muscle obtained with a STEAM-DTI sequence with different diffusion encoding times (Δ) and compared them to measures from a spin echo (SE) sequence. Ten healthy subjects (mean age 31.5 ± 4.7 years; five females) underwent 3-Tesla STEAM and SE-DTI of the shoulder in three sessions. STEAM was acquired with Δ of 100/200/400/600 ms. The diffusion encoding time in SE scans was 19 ms (b = 500 s/mm<sup>2</sup>). Region of interest-based measurement of fractional anisotropy (FA), mean diffusivity (MD), and SNR was performed. Intraclass correlation coefficients (ICCs) were computed to assess test-retest reliability. ANOVA with post-hoc pairwise tests was used to compare measures between different Δ of STEAM as well as STEAM and SE, respectively. FA was significantly higher (FA<sub>STEAM</sub>: 0.38-0.46 vs. FA<sub>SE</sub>: 0.26) and MD significantly lower (MD<sub>STEAM</sub>: 1.20-1.33 vs. MD<sub>SE</sub>: 1.62 × 10<sup>-3</sup> mm<sup>2</sup>/s) in STEAM compared to SE (p < 0.001, respectively). SNR was significantly higher for SE (72.3 ± 8.7) than for STEAM (p < 0.001). ICCs were excellent for FA in STEAM (≥0.911) and SE (0.960). For MD, ICCs were good for STEAM<sub>100ms-600ms</sub> (≥0.759) and SE (0.752). STEAM and SE exhibited excellent reliability for FA and good reliability for MD in the supraspinatus muscle. SNR was significantly higher in SE compared to STEAM.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5279"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602640/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142504950","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Motion and magnetic field inhomogeneity correction techniques for chemical exchange saturation transfer (CEST) MRI: A contemporary review. 化学交换饱和传递(CEST)磁共振成像的运动和磁场不均匀性校正技术:当代综述。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-11-12 DOI: 10.1002/nbm.5294
Gizeaddis Lamesgin Simegn, Phillip Zhe Sun, Jinyuan Zhou, Mina Kim, Ravinder Reddy, Zhongliang Zu, Moritz Zaiss, Nirbhay Narayan Yadav, Richard A E Edden, Peter C M van Zijl, Linda Knutsson

Chemical exchange saturation transfer (CEST) magnetic resonance imaging (MRI) has emerged as a powerful imaging technique sensitive to tissue molecular composition, pH, and metabolic processes in situ. CEST MRI uniquely probes the physical exchange of protons between water and specific molecules within tissues, providing a window into physiological phenomena that remain invisible to standard MRI. However, given the very low concentration (millimolar range) of CEST compounds, the effects measured are generally only on the order of a few percent of the water signal. Consequently, a few critical challenges, including correction of motion artifacts and magnetic field (B0 and B1 +) inhomogeneities, have to be addressed in order to unlock the full potential of CEST MRI. Motion, whether from patient movement or inherent physiological pulsations, can distort the CEST signal, hindering accurate quantification. B0 and B1 + inhomogeneities, arising from scanner hardware imperfections, further complicate data interpretation by introducing spurious variations in the signal intensity. Without proper correction of these confounding factors, reliable analysis and clinical translation of CEST MRI remain challenging. Motion correction methods aim to compensate for patient movement during (prospective) or after (retrospective) image acquisition, reducing artifacts and preserving data quality. Similarly, B0 and B1 + inhomogeneity correction techniques enhance the spatial and spectral accuracy of CEST MRI. This paper aims to provide a comprehensive review of the current landscape of motion and magnetic field inhomogeneity correction methods in CEST MRI. The methods discussed apply to saturation transfer (ST) MRI in general, including semisolid magnetization transfer contrast (MTC) and relayed nuclear Overhauser enhancement (rNOE) studies.

化学交换饱和转移(CEST)磁共振成像(MRI)已成为一种强大的成像技术,对组织分子成分、pH 值和原位代谢过程非常敏感。CEST 磁共振成像能独特地探测组织内水和特定分子之间质子的物理交换,为了解标准磁共振成像看不到的生理现象提供了一个窗口。然而,由于 CEST 化合物的浓度非常低(在毫摩尔范围内),所测得的效果通常只有水信号的百分之几。因此,为了充分释放 CEST MRI 的潜力,必须解决一些关键难题,包括纠正运动伪影和磁场(B0 和 B1 +)不均匀性。运动,无论是患者的移动还是固有的生理脉动,都会扭曲 CEST 信号,阻碍精确量化。扫描仪硬件缺陷导致的 B0 和 B1 + 不均匀性会在信号强度中引入虚假变化,从而使数据解读更加复杂。如果不对这些干扰因素进行适当的校正,CEST MRI 的可靠分析和临床应用仍然具有挑战性。运动校正方法旨在补偿患者在图像采集期间(前瞻性)或采集之后(回顾性)的运动,从而减少伪影并保持数据质量。同样,B0 和 B1 + 不均匀性校正技术可提高 CEST MRI 的空间和频谱精度。本文旨在全面回顾目前 CEST MRI 中运动和磁场不均匀校正方法的现状。所讨论的方法一般适用于饱和转移(ST)磁共振成像,包括半固体磁化转移对比(MTC)和中继核奥豪斯增强(rNOE)研究。
{"title":"Motion and magnetic field inhomogeneity correction techniques for chemical exchange saturation transfer (CEST) MRI: A contemporary review.","authors":"Gizeaddis Lamesgin Simegn, Phillip Zhe Sun, Jinyuan Zhou, Mina Kim, Ravinder Reddy, Zhongliang Zu, Moritz Zaiss, Nirbhay Narayan Yadav, Richard A E Edden, Peter C M van Zijl, Linda Knutsson","doi":"10.1002/nbm.5294","DOIUrl":"10.1002/nbm.5294","url":null,"abstract":"<p><p>Chemical exchange saturation transfer (CEST) magnetic resonance imaging (MRI) has emerged as a powerful imaging technique sensitive to tissue molecular composition, pH, and metabolic processes in situ. CEST MRI uniquely probes the physical exchange of protons between water and specific molecules within tissues, providing a window into physiological phenomena that remain invisible to standard MRI. However, given the very low concentration (millimolar range) of CEST compounds, the effects measured are generally only on the order of a few percent of the water signal. Consequently, a few critical challenges, including correction of motion artifacts and magnetic field (B<sub>0</sub> and B<sub>1</sub> <sup>+</sup>) inhomogeneities, have to be addressed in order to unlock the full potential of CEST MRI. Motion, whether from patient movement or inherent physiological pulsations, can distort the CEST signal, hindering accurate quantification. B<sub>0</sub> and B<sub>1</sub> <sup>+</sup> inhomogeneities, arising from scanner hardware imperfections, further complicate data interpretation by introducing spurious variations in the signal intensity. Without proper correction of these confounding factors, reliable analysis and clinical translation of CEST MRI remain challenging. Motion correction methods aim to compensate for patient movement during (prospective) or after (retrospective) image acquisition, reducing artifacts and preserving data quality. Similarly, B<sub>0</sub> and B<sub>1</sub> <sup>+</sup> inhomogeneity correction techniques enhance the spatial and spectral accuracy of CEST MRI. This paper aims to provide a comprehensive review of the current landscape of motion and magnetic field inhomogeneity correction methods in CEST MRI. The methods discussed apply to saturation transfer (ST) MRI in general, including semisolid magnetization transfer contrast (MTC) and relayed nuclear Overhauser enhancement (rNOE) studies.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5294"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11606773/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624737","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Noninvasive Grading of Liver Fibrosis Based on Texture Analysis From MRI-Derived Radiomics. 基于mri放射组学纹理分析的无创肝纤维化分级。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 DOI: 10.1002/nbm.5301
Jennifer Gotta, Leon D Gruenewald, Philipp Reschke, Christian Booz, Scherwin Mahmoudi, Bram Stieltjes, Moon Hyung Choi, Tommaso D'Angelo, Simon Bernatz, Thomas J Vogl, Ralph Sinkus, Robert Grimm, Ralph Strecker, Sebastian Haberkorn, Vitali Koch

Given the increasing global prevalence of metabolic syndrome, this study aimed to assess the potential of MRI-derived radiomics in noninvasively grading fibrosis. The study included 79 prospectively enrolled participants who had undergone MRE due to known or suspected liver disease between November 2022 and September 2023. Among them, 48 patients were diagnosed with histopathologically confirmed liver fibrosis. A total of 107 radiomic features per patient were extracted from MRI imaging. The dataset was then divided into training and test sets for model development and validation. Stepwise feature reduction was employed to identify the most relevant features and subsequently used to train a gradient-boosted tree model. The gradient-boosted tree model, trained on the training cohort with identified radiomic features to differentiate fibrosis grades, exhibited good performances, achieving AUC values from 0.997 to 0.998. In the independent test cohort of 24 patients, the radiomics model demonstrated AUC values ranging from 0.617 to 0.830, with the highest AUC of 0.830 (95% CI 0.520-0.830) for classifying fibrosis grade 2. Incorporating ADC values did not improve the model's performance. In conclusion, our study emphasizes the significant promise of using radiomics analysis on MRI images for noninvasively staging liver fibrosis. This method provides valuable insights into tissue characteristics and patterns, enabling a retrospective liver fibrosis severity assessment from nondedicated MRI scans.

鉴于代谢综合征的全球患病率不断上升,本研究旨在评估mri衍生放射组学在无创纤维化分级中的潜力。该研究纳入了79名前瞻性参与者,他们在2022年11月至2023年9月期间因已知或疑似肝脏疾病接受了MRE。其中48例经组织病理学确诊为肝纤维化。每例患者共提取107个放射学特征。然后将数据集分为训练集和测试集,用于模型开发和验证。采用逐步特征约简来识别最相关的特征,随后用于训练梯度增强树模型。梯度增强树模型在具有确定的放射学特征的训练队列上进行训练以区分纤维化等级,表现出良好的性能,AUC值在0.997至0.998之间。在24例患者的独立测试队列中,放射组学模型显示的AUC值范围为0.617至0.830,将纤维化分级为2级的AUC最高为0.830 (95% CI 0.52 -0.830)。加入ADC值并没有提高模型的性能。总之,我们的研究强调了在MRI图像上使用放射组学分析进行无创肝纤维化分期的重要前景。该方法提供了对组织特征和模式的有价值的见解,可以通过非专用MRI扫描进行回顾性肝纤维化严重程度评估。
{"title":"Noninvasive Grading of Liver Fibrosis Based on Texture Analysis From MRI-Derived Radiomics.","authors":"Jennifer Gotta, Leon D Gruenewald, Philipp Reschke, Christian Booz, Scherwin Mahmoudi, Bram Stieltjes, Moon Hyung Choi, Tommaso D'Angelo, Simon Bernatz, Thomas J Vogl, Ralph Sinkus, Robert Grimm, Ralph Strecker, Sebastian Haberkorn, Vitali Koch","doi":"10.1002/nbm.5301","DOIUrl":"10.1002/nbm.5301","url":null,"abstract":"<p><p>Given the increasing global prevalence of metabolic syndrome, this study aimed to assess the potential of MRI-derived radiomics in noninvasively grading fibrosis. The study included 79 prospectively enrolled participants who had undergone MRE due to known or suspected liver disease between November 2022 and September 2023. Among them, 48 patients were diagnosed with histopathologically confirmed liver fibrosis. A total of 107 radiomic features per patient were extracted from MRI imaging. The dataset was then divided into training and test sets for model development and validation. Stepwise feature reduction was employed to identify the most relevant features and subsequently used to train a gradient-boosted tree model. The gradient-boosted tree model, trained on the training cohort with identified radiomic features to differentiate fibrosis grades, exhibited good performances, achieving AUC values from 0.997 to 0.998. In the independent test cohort of 24 patients, the radiomics model demonstrated AUC values ranging from 0.617 to 0.830, with the highest AUC of 0.830 (95% CI 0.520-0.830) for classifying fibrosis grade 2. Incorporating ADC values did not improve the model's performance. In conclusion, our study emphasizes the significant promise of using radiomics analysis on MRI images for noninvasively staging liver fibrosis. This method provides valuable insights into tissue characteristics and patterns, enabling a retrospective liver fibrosis severity assessment from nondedicated MRI scans.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":"38 1","pages":"e5301"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11659494/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142865016","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Automated detection of motion artifacts in brain MR images using deep learning. 利用深度学习自动检测脑部 MR 图像中的运动伪影。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-10-22 DOI: 10.1002/nbm.5276
Marina Manso Jimeno, Keerthi Sravan Ravi, Maggie Fung, Dotun Oyekunle, Godwin Ogbole, John Thomas Vaughan, Sairam Geethanath

Quality assessment, including inspecting the images for artifacts, is a critical step during magnetic resonance imaging (MRI) data acquisition to ensure data quality and downstream analysis or interpretation success. This study demonstrates a deep learning (DL) model to detect rigid motion in T1-weighted brain images. We leveraged a 2D convolutional neural network (CNN) trained on motion-synthesized data for three-class classification and tested it on publicly available retrospective and prospective datasets. Grad-CAM heatmaps enabled the identification of failure modes and provided an interpretation of the model's results. The model achieved average precision and recall metrics of 85% and 80% on six motion-simulated retrospective datasets. Additionally, the model's classifications on the prospective dataset showed 93% agreement with the labeling of a radiologist a strong inverse correlation (-0.84) compared to average edge strength, an image quality metric indicative of motion. This model is aimed at inline automatic detection of motion artifacts, accelerating part of the time-consuming quality assessment (QA) process and augmenting expertise on-site, particularly relevant in low-resource settings where local MR knowledge is scarce.

在磁共振成像(MRI)数据采集过程中,质量评估(包括检查图像是否存在伪影)是确保数据质量和下游分析或解读成功的关键步骤。本研究展示了一种深度学习(DL)模型,用于检测 T1 加权脑图像中的刚性运动。我们利用在运动合成数据上训练的二维卷积神经网络(CNN)进行了三类分类,并在公开的回顾性和前瞻性数据集上进行了测试。Grad-CAM 热图能够识别故障模式,并对模型的结果进行解释。在六个运动模拟回顾数据集上,该模型的平均精确度和召回率分别达到 85% 和 80%。此外,该模型在前瞻性数据集上的分类与放射科医生的标注显示出 93% 的一致性,与指示运动的图像质量指标--平均边缘强度相比,两者之间存在较强的反相关性(-0.84)。该模型旨在实现运动伪影的在线自动检测,加快耗时的质量评估(QA)过程,并增强现场的专业知识,尤其适用于当地磁共振知识匮乏的低资源环境。
{"title":"Automated detection of motion artifacts in brain MR images using deep learning.","authors":"Marina Manso Jimeno, Keerthi Sravan Ravi, Maggie Fung, Dotun Oyekunle, Godwin Ogbole, John Thomas Vaughan, Sairam Geethanath","doi":"10.1002/nbm.5276","DOIUrl":"10.1002/nbm.5276","url":null,"abstract":"<p><p>Quality assessment, including inspecting the images for artifacts, is a critical step during magnetic resonance imaging (MRI) data acquisition to ensure data quality and downstream analysis or interpretation success. This study demonstrates a deep learning (DL) model to detect rigid motion in T<sub>1</sub>-weighted brain images. We leveraged a 2D convolutional neural network (CNN) trained on motion-synthesized data for three-class classification and tested it on publicly available retrospective and prospective datasets. Grad-CAM heatmaps enabled the identification of failure modes and provided an interpretation of the model's results. The model achieved average precision and recall metrics of 85% and 80% on six motion-simulated retrospective datasets. Additionally, the model's classifications on the prospective dataset showed 93% agreement with the labeling of a radiologist a strong inverse correlation (-0.84) compared to average edge strength, an image quality metric indicative of motion. This model is aimed at inline automatic detection of motion artifacts, accelerating part of the time-consuming quality assessment (QA) process and augmenting expertise on-site, particularly relevant in low-resource settings where local MR knowledge is scarce.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5276"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142504948","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Saturation transfer (CEST and MT) MRI for characterization of U-87 MG glioma in the rat. 饱和转移(CEST 和 MT)磁共振成像用于描述大鼠 U-87 MG 胶质瘤的特征。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-10-29 DOI: 10.1002/nbm.5282
Wilfred W Lam, Agata Chudzik, Natalia Lehman, Artur Łazorczyk, Paulina Kozioł, Anna Niedziałek, Athavan Gananathan, Anna Orzyłowska, Radosław Rola, Greg J Stanisz

The focus of this work was to identify the optimal magnetic resonance imaging (MRI) contrast between orthotopic U-87 MG tumours and normal appearing brain with the eventual goal of treatment response monitoring. U-87 MG human glioblastoma cells were injected into the brain of RNU nude rats (n = 9). The rats were imaged at 7 T at three timepoints for all animals: 3-5, 7-9, and 11-13 days after implantation. Whole-brain T1-weighted (before and after gadolinium contrast agent injection), diffusion, and fluid-attenuated inversion recovery scans were performed. In addition, single-slice saturation-transfer-weighted chemical exchange saturation transfer (CEST), magnetization transfer (MT), and water saturation shift referencing (WASSR) contrast Z-spectra and T1 and T2 maps were also acquired. The MT and WASSR Z-spectra and T1 map were fitted to a two-pool quantitative MT model to estimate the T2 of the free and macromolecular-bound water molecules, the relative macromolecular pool size (M0, MT), and the magnetization exchange rate from the macromolecular pool to the free pool (RMT). The T1-corrected apparent exchange-dependent relaxation (AREX) metric to isolate the CEST contributions was also calculated. The lesion on M0, MT and AREX maps with a B1 of 2 μT best matched the hyperintensity on the post-contrast T1-weighted image. There was also good separation in Z-spectra between the lesion and contralateral cortex in the 2-μT CEST and 3- and 5-μT MT Z-spectra at all time points. A pairwise Wilcoxon signed-rank tests with Holm-Bonferroni adjustment on MRI parameters was performed and the differences between enhancing lesion and contralateral cortex for the MT ratio with 2 μT saturation at 3.6 ppm frequency offset (corresponding to the amide chemical group) and M0, MT were both strongly significant (p < 0.001) at all time points. This work has identified that differences between enhancing lesion and contralateral cortex are strongest in MTR with B1 = 2 μT at 3.6 ppm and relative macromolecular pool size (M0, MT) images over entire period of 3-13 days after cancer cell implantation.

这项工作的重点是确定正位 U-87 MG 肿瘤与正常大脑之间的最佳磁共振成像(MRI)对比度,最终目的是监测治疗反应。将 U-87 MG 人胶质母细胞瘤细胞注射到 RNU 裸鼠(n = 9)的大脑中。在植入后 3-5、7-9 和 11-13 天三个时间点对所有动物进行 7 T 成像。进行了全脑 T1 加权(钆造影剂注射前后)、弥散和液体衰减反转恢复扫描。此外,还采集了单片饱和转移加权化学交换饱和转移(CEST)、磁化转移(MT)和水饱和转移参照(WASSR)对比 Z 谱以及 T1 和 T2 图。将 MT 和 WASSR Z 光谱及 T1 图拟合到双池定量 MT 模型中,以估算自由水分子和与大分子结合的水分子的 T2、大分子池的相对大小(M0,MT)以及从大分子池到自由池的磁化交换率(RMT)。此外,还计算了 T1 校正表观交换依赖性弛豫(AREX)指标,以分离 CEST 贡献。B1为2 μT的M0、MT和AREX图上的病灶与对比后T1加权图像上的高密度最为匹配。在所有时间点的 2-μT CEST、3-和 5-μT MT Z 频谱上,病变和对侧皮层之间的 Z 频谱也有很好的分离。在癌细胞植入后的整个 3-13 天期间,2μT 饱和、3.6 ppm 频率偏移的 MT 比值(对应于酰胺化学组)和 M0、MT 图像在增强病变区和对侧皮层之间的差异都非常显著(P 1 = 2 μT at 3.6 ppm 和相对大分子池大小(M0、MT))。
{"title":"Saturation transfer (CEST and MT) MRI for characterization of U-87 MG glioma in the rat.","authors":"Wilfred W Lam, Agata Chudzik, Natalia Lehman, Artur Łazorczyk, Paulina Kozioł, Anna Niedziałek, Athavan Gananathan, Anna Orzyłowska, Radosław Rola, Greg J Stanisz","doi":"10.1002/nbm.5282","DOIUrl":"10.1002/nbm.5282","url":null,"abstract":"<p><p>The focus of this work was to identify the optimal magnetic resonance imaging (MRI) contrast between orthotopic U-87 MG tumours and normal appearing brain with the eventual goal of treatment response monitoring. U-87 MG human glioblastoma cells were injected into the brain of RNU nude rats (n = 9). The rats were imaged at 7 T at three timepoints for all animals: 3-5, 7-9, and 11-13 days after implantation. Whole-brain T<sub>1</sub>-weighted (before and after gadolinium contrast agent injection), diffusion, and fluid-attenuated inversion recovery scans were performed. In addition, single-slice saturation-transfer-weighted chemical exchange saturation transfer (CEST), magnetization transfer (MT), and water saturation shift referencing (WASSR) contrast Z-spectra and T<sub>1</sub> and T<sub>2</sub> maps were also acquired. The MT and WASSR Z-spectra and T<sub>1</sub> map were fitted to a two-pool quantitative MT model to estimate the T<sub>2</sub> of the free and macromolecular-bound water molecules, the relative macromolecular pool size (M<sub>0, MT</sub>), and the magnetization exchange rate from the macromolecular pool to the free pool (R<sub>MT</sub>). The T<sub>1</sub>-corrected apparent exchange-dependent relaxation (AREX) metric to isolate the CEST contributions was also calculated. The lesion on M<sub>0, MT</sub> and AREX maps with a B<sub>1</sub> of 2 μT best matched the hyperintensity on the post-contrast T<sub>1</sub>-weighted image. There was also good separation in Z-spectra between the lesion and contralateral cortex in the 2-μT CEST and 3- and 5-μT MT Z-spectra at all time points. A pairwise Wilcoxon signed-rank tests with Holm-Bonferroni adjustment on MRI parameters was performed and the differences between enhancing lesion and contralateral cortex for the MT ratio with 2 μT saturation at 3.6 ppm frequency offset (corresponding to the amide chemical group) and M<sub>0, MT</sub> were both strongly significant (p < 0.001) at all time points. This work has identified that differences between enhancing lesion and contralateral cortex are strongest in MTR with B<sub>1</sub> = 2 μT at 3.6 ppm and relative macromolecular pool size (M<sub>0, MT</sub>) images over entire period of 3-13 days after cancer cell implantation.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5282"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11631369/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142546570","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Float solenoid balun for MRI. 用于核磁共振成像的浮动电磁平衡器。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-11-08 DOI: 10.1002/nbm.5292
Ming Lu, Yijin Yang, Shuyang Chai, Xinqiang Yan

Baluns are crucial in MRI RF coils, essential for minimizing common-mode currents, maintaining signal-to-noise ratio, and ensuring patient safety. This paper introduces the innovative float solenoid balun, based on the renowned solenoid cable trap, and conducts a comparative analysis with the widely used float bazooka balun. Leveraging robust inductive coupling between the cable shield and float resonator, the float solenoid balun offers compact dimensions and post-installation adjustability. Through electromagnetic simulations and bench testing across static fields (1.5, 3, and 7 T), the float solenoid balun demonstrates superior common-mode rejection ratios compared to the float bazooka balun. Notably, its float design facilitates easy post-installation adjustment and eliminates the need for soldering on the cable shield, enhancing usability and reducing risks. Furthermore, the solenoid balun's compact footprint addresses the increasing demand for smaller baluns in modern MRI scanners with denser coil arrays. The float solenoid balun offers a promising solution by conserving valuable space within the RF coil, simplifying practical hardware implementation and cable routing, and accommodating more elements in RF arrays, with great potential for enhancing MRI performance.

平衡器在核磁共振射频线圈中至关重要,对于最大限度地减少共模电流、保持信噪比和确保患者安全至关重要。本文介绍了基于著名的螺线管电缆陷波器的创新型浮子螺线管平衡器,并与广泛使用的浮子巴祖卡平衡器进行了比较分析。浮控电磁平衡器利用电缆屏蔽和浮控谐振器之间强大的电感耦合,尺寸紧凑,安装后可调。通过静态场(1.5、3 和 7 T)的电磁仿真和台架测试,浮子螺线管平衡器与浮子巴祖卡平衡器相比,具有更出色的共模抑制比。值得注意的是,其浮动设计便于安装后调整,无需在电缆屏蔽上进行焊接,从而提高了可用性并降低了风险。此外,螺线管平衡器占地面积小,满足了线圈阵列更密集的现代核磁共振扫描仪对小型平衡器日益增长的需求。浮动螺线管平衡器提供了一种有前途的解决方案,它节省了射频线圈内的宝贵空间,简化了实际硬件实施和电缆布线,并可在射频阵列中容纳更多元件,在提高磁共振成像性能方面具有巨大潜力。
{"title":"Float solenoid balun for MRI.","authors":"Ming Lu, Yijin Yang, Shuyang Chai, Xinqiang Yan","doi":"10.1002/nbm.5292","DOIUrl":"10.1002/nbm.5292","url":null,"abstract":"<p><p>Baluns are crucial in MRI RF coils, essential for minimizing common-mode currents, maintaining signal-to-noise ratio, and ensuring patient safety. This paper introduces the innovative float solenoid balun, based on the renowned solenoid cable trap, and conducts a comparative analysis with the widely used float bazooka balun. Leveraging robust inductive coupling between the cable shield and float resonator, the float solenoid balun offers compact dimensions and post-installation adjustability. Through electromagnetic simulations and bench testing across static fields (1.5, 3, and 7 T), the float solenoid balun demonstrates superior common-mode rejection ratios compared to the float bazooka balun. Notably, its float design facilitates easy post-installation adjustment and eliminates the need for soldering on the cable shield, enhancing usability and reducing risks. Furthermore, the solenoid balun's compact footprint addresses the increasing demand for smaller baluns in modern MRI scanners with denser coil arrays. The float solenoid balun offers a promising solution by conserving valuable space within the RF coil, simplifying practical hardware implementation and cable routing, and accommodating more elements in RF arrays, with great potential for enhancing MRI performance.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5292"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11617134/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624728","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fatty acid composition evaluation of abdominal adipose tissue using chemical shiftencoded MRI: Association with diabetes. 利用化学位移编码核磁共振成像评估腹部脂肪组织的脂肪酸组成:与糖尿病的关系
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-11-07 DOI: 10.1002/nbm.5290
Dingxia Liu, Minyan Yin, Jiejun Chen, Caixia Fu, Manuel Schneider, Dominik Nickel, Xiuzhong Yao

This study investigated the association between the fatty acid composition of abdominal adipose tissue in NAFLD patients using chemical shift-encoded MRI and the development of insulin resistance and T2DM. We enrolled 231 subjects with NAFLD who underwent both abdominal magnetic resonance spectroscopy and chemical shift-encoded MRI: comprising of 49 T2DM patients and 182 subjects without. MRI- and MRS-based liver fat fraction was measured from a circular region of interest on the right lobe of the liver. The abdominal fatty acid compositions were measured at the umbilical level with chemical shift-encoded MRI. Bland-Altman analysis, Student's t test, Mann-Whitney U test, and Spearman correlation analysis were performed. The logistic regression was applied to identify the independent factors for T2DM. Then, the predictive performance was assessed by Receiver operating characteristic curve analyses. An excellent agreement was found between liver fat fraction measured by MRS and MRI. (slope = 0.8; bias =-0.92%). In, patients with T2DM revealed lower fractions of mono-unsaturated fatty acid (Fmufa) (33.68 ± 10.62 vs 38.62 ± 12.21, P =.0089) and higher fractions of saturated fatty acid (Fsfa) (34.11 ± 9.746 vs 31.25 ± 8.66, P =.0351) of visceral fat tissue compared with patients without. BMI, HDL-c, Fmufa and Fsfa of visceral fat were independent factors for T2DM. Furthermore, Fsfa-S% was positively correlated with liver enzyme levels (P =.003 and 0.04). However, Fmufa-V% was negatively correlated with fasting blood glucose, HbA1c and HOMA-IR (P =.004, P =.001 and P =.03 respectively). Hence, the evaluation of fatty acid compositions of abdominal fat tissue using chemical shift-encoded MRI may have a predictive value for T2DM in patients with NAFLD.

本研究利用化学位移编码磁共振成像技术研究了非酒精性脂肪肝患者腹部脂肪组织的脂肪酸组成与胰岛素抵抗和 T2DM 发生之间的关系。我们招募了 231 名同时接受腹部磁共振波谱和化学位移编码 MRI 检查的非酒精性脂肪肝患者:其中包括 49 名 T2DM 患者和 182 名非 T2DM 患者。基于磁共振成像和 MRS 的肝脏脂肪率是从肝脏右叶的圆形感兴趣区测量的。用化学位移编码核磁共振成像在脐部水平测量腹部脂肪酸组成。进行了Bland-Altman分析、Student's t检验、Mann-Whitney U检验和Spearman相关分析。采用逻辑回归确定 T2DM 的独立因素。然后,通过接收者工作特征曲线分析评估了预测性能。MRS和磁共振成像测量的肝脏脂肪率之间的一致性非常好(斜率=0.8;偏差=-0.92%)。与非 T2DM 患者相比,T2DM 患者内脏脂肪组织中单不饱和脂肪酸(Fmufa)含量较低(33.68 ± 10.62 vs 38.62 ± 12.21,P =.0089),饱和脂肪酸(Fsfa)含量较高(34.11 ± 9.746 vs 31.25 ± 8.66,P =.0351)。体重指数(BMI)、高密度脂蛋白胆固醇(HDL-c)、内脏脂肪的Fmufa和Fsfa是导致T2DM的独立因素。此外,Fsfa-S% 与肝酶水平呈正相关(P =.003 和 0.04)。然而,Fmufa-V% 与空腹血糖、HbA1c 和 HOMA-IR 呈负相关(分别为 P =.004、P =.001 和 P =.03)。因此,利用化学位移编码磁共振成像评估腹部脂肪组织的脂肪酸组成可能对非酒精性脂肪肝患者的 T2DM 具有预测价值。
{"title":"Fatty acid composition evaluation of abdominal adipose tissue using chemical shiftencoded MRI: Association with diabetes.","authors":"Dingxia Liu, Minyan Yin, Jiejun Chen, Caixia Fu, Manuel Schneider, Dominik Nickel, Xiuzhong Yao","doi":"10.1002/nbm.5290","DOIUrl":"10.1002/nbm.5290","url":null,"abstract":"<p><p>This study investigated the association between the fatty acid composition of abdominal adipose tissue in NAFLD patients using chemical shift-encoded MRI and the development of insulin resistance and T2DM. We enrolled 231 subjects with NAFLD who underwent both abdominal magnetic resonance spectroscopy and chemical shift-encoded MRI: comprising of 49 T2DM patients and 182 subjects without. MRI- and MRS-based liver fat fraction was measured from a circular region of interest on the right lobe of the liver. The abdominal fatty acid compositions were measured at the umbilical level with chemical shift-encoded MRI. Bland-Altman analysis, Student's t test, Mann-Whitney U test, and Spearman correlation analysis were performed. The logistic regression was applied to identify the independent factors for T2DM. Then, the predictive performance was assessed by Receiver operating characteristic curve analyses. An excellent agreement was found between liver fat fraction measured by MRS and MRI. (slope = 0.8; bias =-0.92%). In, patients with T2DM revealed lower fractions of mono-unsaturated fatty acid (F<sub>mufa</sub>) (33.68 ± 10.62 vs 38.62 ± 12.21, P =.0089) and higher fractions of saturated fatty acid (F<sub>sfa</sub>) (34.11 ± 9.746 vs 31.25 ± 8.66, P =.0351) of visceral fat tissue compared with patients without. BMI, HDL-c, F<sub>mufa</sub> and F<sub>sfa</sub> of visceral fat were independent factors for T2DM. Furthermore, F<sub>sfa</sub>-S% was positively correlated with liver enzyme levels (P =.003 and 0.04). However, F<sub>mufa</sub>-V% was negatively correlated with fasting blood glucose, HbA1c and HOMA-IR (P =.004, P =.001 and P =.03 respectively). Hence, the evaluation of fatty acid compositions of abdominal fat tissue using chemical shift-encoded MRI may have a predictive value for T2DM in patients with NAFLD.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5290"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142603525","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
In vivo rat brain mapping of multiple gray matter water populations using nonparametric D(ω)-R1-R2 distributions MRI. 利用非参数 D(ω)-R1-R2 分布核磁共振成像绘制体内大鼠大脑多个灰质水群图。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-11-24 DOI: 10.1002/nbm.5286
Maxime Yon, Omar Narvaez, Daniel Topgaard, Alejandra Sierra

Massively multidimensional diffusion magnetic resonance imaging combines tensor-valued encoding, oscillating gradients, and diffusion-relaxation correlation to provide multicomponent subvoxel parameters depicting some tissue microstructural features. This method was successfully implemented ex vivo in microimaging systems and clinical conditions with tensor-valued gradient waveform of variable duration giving access to a narrow diffusion frequency (ω) range. We demonstrate here its preclinical in vivo implementation with a protocol of 389 contrast images probing a wide diffusion frequency range of 18 to 92 Hz at b-values up to 2.1 ms/μm2 enabled by the use of modulated gradient waveforms and combined with multislice high-resolution and low-distortion echo planar imaging acquisition with segmented and full reversed phase-encode acquisition. This framework allows the identification of diffusion ω-dependence in the rat cerebellum and olfactory bulb gray matter (GM), and the parameter distributions are shown to resolve two water pools in the cerebellum GM with different diffusion coefficients, shapes, ω-dependence, relaxation rates, and spatial repartition whose attribution to specific microstructure could modify the current understanding of the origin of restriction in GM.

大规模多维弥散磁共振成像结合了张量值编码、振荡梯度和弥散-松弛相关性,以提供描绘某些组织微观结构特征的多组分子体参数。这种方法已在微成像系统和临床条件下成功实施,其张量值梯度波形持续时间可变,可进入较窄的扩散频率(ω)范围。我们在这里展示了其临床前体内应用,通过使用调制梯度波形,结合多片高分辨率和低失真回波平面成像采集,以及分段和全反向相位编码采集,在 18 到 92 Hz 的宽扩散频率范围内探测了 389 幅对比图像,b 值高达 2.1 ms/μm2。该框架可识别大鼠小脑和嗅球灰质(GM)中的扩散ω依赖性,其参数分布可解析小脑GM中的两个水池,这两个水池具有不同的扩散系数、形状、ω依赖性、弛豫速率和空间分布,其与特定微观结构的关系可改变目前对GM中限制起源的理解。
{"title":"In vivo rat brain mapping of multiple gray matter water populations using nonparametric D(ω)-R<sub>1</sub>-R<sub>2</sub> distributions MRI.","authors":"Maxime Yon, Omar Narvaez, Daniel Topgaard, Alejandra Sierra","doi":"10.1002/nbm.5286","DOIUrl":"10.1002/nbm.5286","url":null,"abstract":"<p><p>Massively multidimensional diffusion magnetic resonance imaging combines tensor-valued encoding, oscillating gradients, and diffusion-relaxation correlation to provide multicomponent subvoxel parameters depicting some tissue microstructural features. This method was successfully implemented ex vivo in microimaging systems and clinical conditions with tensor-valued gradient waveform of variable duration giving access to a narrow diffusion frequency (ω) range. We demonstrate here its preclinical in vivo implementation with a protocol of 389 contrast images probing a wide diffusion frequency range of 18 to 92 Hz at b-values up to 2.1 ms/μm<sup>2</sup> enabled by the use of modulated gradient waveforms and combined with multislice high-resolution and low-distortion echo planar imaging acquisition with segmented and full reversed phase-encode acquisition. This framework allows the identification of diffusion ω-dependence in the rat cerebellum and olfactory bulb gray matter (GM), and the parameter distributions are shown to resolve two water pools in the cerebellum GM with different diffusion coefficients, shapes, ω-dependence, relaxation rates, and spatial repartition whose attribution to specific microstructure could modify the current understanding of the origin of restriction in GM.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5286"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11628177/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142710775","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Simultaneous assessment of cerebral glucose and oxygen metabolism and perfusion in rats using interleaved deuterium (2H) and oxygen-17 (17O) MRS. 利用交错氘(2H)和氧-17(17O)磁共振成像(MRS)同时评估大鼠的脑葡萄糖和氧代谢及灌注。
IF 2.7 4区 医学 Q2 BIOPHYSICS Pub Date : 2025-01-01 Epub Date: 2024-11-06 DOI: 10.1002/nbm.5284
Guangle Zhang, Parker Jenkins, Wei Zhu, Wei Chen, Xiao-Hong Zhu

Cerebral glucose and oxygen metabolism and blood perfusion play key roles in neuroenergetics and oxidative phosphorylation to produce adenosine triphosphate (ATP) energy molecules in supporting cellular activity and brain function. Their impairments have been linked to numerous brain disorders. This study aimed to develop an in vivo magnetic resonance spectroscopy (MRS) method capable of simultaneously assessing and quantifying the major cerebral metabolic rates of glucose (CMRGlc) and oxygen (CMRO2) consumption, lactate formation (CMRLac), and tricarboxylic acid (TCA) cycle (VTCA); cerebral blood flow (CBF); and oxygen extraction fraction (OEF) via a single dynamic MRS measurement using an interleaved deuterium (2H) and oxygen-17 (17O) MRS approach. We introduced a single-loop multifrequency radio-frequency (RF) surface coil that can be used to acquire proton (1H) magnetic resonance imaging (MRI) or interleaved low-γ X-nuclei 2H and 17O MRS. By combining this RF coil with a modified MRS pulse sequence, 17O-isotope-labeled oxygen gas inhalation, and intravenous 2H-isotope-labeled glucose administration, we demonstrate for the first time the feasibility of simultaneously and quantitatively measuring six important physiological parameters, CMRGlc, CMRO2, CMRLac, VTCA, CBF, and OEF, in rat brains at 16.4 T. The interleaved 2H-17O MRS technique should be readily adapted to image and study cerebral energy metabolism and perfusion in healthy and diseased brains.

脑葡萄糖和氧代谢以及血液灌注在神经能量和氧化磷酸化过程中发挥着关键作用,以产生三磷酸腺苷(ATP)能量分子,支持细胞活动和大脑功能。它们的损伤与许多脑部疾病有关。本研究旨在开发一种体内磁共振光谱(MRS)方法,能够同时评估和量化葡萄糖(CMRGlc)和氧(CMRO2)消耗、乳酸形成(CMRLac)和三羧酸(TCA)循环(VTCA)等主要脑代谢率;我们采用交错氘(2H)和氧-17(17O)MRS 方法,通过单次动态 MRS 测量获得了脑血流量(CBF)和氧萃取分数(OEF)。我们引入了一种单回路多频射频(RF)表面线圈,可用于获取质子(1H)磁共振成像(MRI)或交错低γ X核 2H和17O MRS。通过将这种射频线圈与改进的 MRS 脉冲序列、17O-同位素标记的氧气吸入和静脉注射 2H-同位素标记的葡萄糖相结合,我们首次证明了在 16.4 T 下同时定量测量大鼠大脑中 CMRGlc、CMRO2、CMRLac、VTCA、CBF 和 OEF 这六个重要生理参数的可行性。交错 2H-17O MRS 技术应能很容易地用于健康和患病大脑能量代谢和灌注的成像和研究。
{"title":"Simultaneous assessment of cerebral glucose and oxygen metabolism and perfusion in rats using interleaved deuterium (<sup>2</sup>H) and oxygen-17 (<sup>17</sup>O) MRS.","authors":"Guangle Zhang, Parker Jenkins, Wei Zhu, Wei Chen, Xiao-Hong Zhu","doi":"10.1002/nbm.5284","DOIUrl":"10.1002/nbm.5284","url":null,"abstract":"<p><p>Cerebral glucose and oxygen metabolism and blood perfusion play key roles in neuroenergetics and oxidative phosphorylation to produce adenosine triphosphate (ATP) energy molecules in supporting cellular activity and brain function. Their impairments have been linked to numerous brain disorders. This study aimed to develop an in vivo magnetic resonance spectroscopy (MRS) method capable of simultaneously assessing and quantifying the major cerebral metabolic rates of glucose (CMR<sub>Glc</sub>) and oxygen (CMRO<sub>2</sub>) consumption, lactate formation (CMR<sub>Lac</sub>), and tricarboxylic acid (TCA) cycle (V<sub>TCA</sub>); cerebral blood flow (CBF); and oxygen extraction fraction (OEF) via a single dynamic MRS measurement using an interleaved deuterium (<sup>2</sup>H) and oxygen-17 (<sup>17</sup>O) MRS approach. We introduced a single-loop multifrequency radio-frequency (RF) surface coil that can be used to acquire proton (<sup>1</sup>H) magnetic resonance imaging (MRI) or interleaved low-γ X-nuclei <sup>2</sup>H and <sup>17</sup>O MRS. By combining this RF coil with a modified MRS pulse sequence, <sup>17</sup>O-isotope-labeled oxygen gas inhalation, and intravenous <sup>2</sup>H-isotope-labeled glucose administration, we demonstrate for the first time the feasibility of simultaneously and quantitatively measuring six important physiological parameters, CMR<sub>Glc</sub>, CMRO<sub>2</sub>, CMR<sub>Lac</sub>, V<sub>TCA</sub>, CBF, and OEF, in rat brains at 16.4 T. The interleaved <sup>2</sup>H-<sup>17</sup>O MRS technique should be readily adapted to image and study cerebral energy metabolism and perfusion in healthy and diseased brains.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5284"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602644/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142582969","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
NMR in Biomedicine
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1