Pub Date : 2026-02-13DOI: 10.1038/s41538-026-00726-6
Zhaoshuo Yu, Ting Lu, Sihao Luo, Xiangyu Meng, Fangzhou He, Zhangwen Peng, Ji Yu, Yajiao Gu, Xianhui Dong, Pengwei Zhang, Tianfang Peng, Li Li, Anlong Xu, Patrick Wall
Plant-derived self-assembled nanoparticles, especially from food-medicine homology sources, are gaining attention, yet their structure-function relationships remain unclear. This study identified such nanoparticles from leaf decoction of Eucommia ulmoides, a key plant in traditional Asian medicine and diet, termed EUPs. These spherical particles (~287.8 nm) were primarily composed of polysaccharides and polyphenols, with 268 polyphenolic compounds detected via UPLC-QTOF-MS. Stepwise dissociation-ultrafiltration and spectroscopic analyses revealed that polyphenols were bound to the polysaccharide through noncovalent interactions, including hydrogen bonding and hydrophobic forces, forming a layered structure with sustained-release and thermo-responsive properties. Compared with free polyphenols, EUPs exhibited significantly prolonged anti-inflammatory effects in LPS-stimulated RAW 264.7 macrophages, reflected by the suppression of key inflammatory cytokines, including TNF-α, IL-6 and NO. Therefore, it aims to offer mechanistic insights into the multi-component synergistic anti-inflammatory effects of E. ulmoides and supporting the material basis of food-medicine homology.
{"title":"Food-medicine homology nanostructures: self-assembly, sustained release, and extended anti-inflammatory effects of Eucommia ulmoides nanoparticles.","authors":"Zhaoshuo Yu, Ting Lu, Sihao Luo, Xiangyu Meng, Fangzhou He, Zhangwen Peng, Ji Yu, Yajiao Gu, Xianhui Dong, Pengwei Zhang, Tianfang Peng, Li Li, Anlong Xu, Patrick Wall","doi":"10.1038/s41538-026-00726-6","DOIUrl":"https://doi.org/10.1038/s41538-026-00726-6","url":null,"abstract":"<p><p>Plant-derived self-assembled nanoparticles, especially from food-medicine homology sources, are gaining attention, yet their structure-function relationships remain unclear. This study identified such nanoparticles from leaf decoction of Eucommia ulmoides, a key plant in traditional Asian medicine and diet, termed EUPs. These spherical particles (~287.8 nm) were primarily composed of polysaccharides and polyphenols, with 268 polyphenolic compounds detected via UPLC-QTOF-MS. Stepwise dissociation-ultrafiltration and spectroscopic analyses revealed that polyphenols were bound to the polysaccharide through noncovalent interactions, including hydrogen bonding and hydrophobic forces, forming a layered structure with sustained-release and thermo-responsive properties. Compared with free polyphenols, EUPs exhibited significantly prolonged anti-inflammatory effects in LPS-stimulated RAW 264.7 macrophages, reflected by the suppression of key inflammatory cytokines, including TNF-α, IL-6 and NO. Therefore, it aims to offer mechanistic insights into the multi-component synergistic anti-inflammatory effects of E. ulmoides and supporting the material basis of food-medicine homology.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146181426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-13DOI: 10.1038/s41538-026-00748-0
Yifan Tang, Ping Yu, Feng Xiong, Zhilai Zhan, Kai Xie, Shuyan Yu, Yifan Ning, Zhanhan Zhou, Chun Wang, Weisen Qian, Xiwen Zhang, Yike Liang, Ruijiao Wang, Guoxia Han, Jian Yang
Lithocarpus litseifolius (sweet tea) is a medicinal and edible plant rich in flavonoids and essential nutrients, with potential as a hepatoprotective beverages and natural sweetener. Although widely cultivated across several provinces in China, the quality and consistency of its raw material remain poorly regulated. To address this, 163 samples (n ≥ 18) from 7 main producing regions were analyzed for 22 functional compounds, 4 stable isotope ratios, and 49 multi-element to discriminate cultivation practices and geographical origins. Orthogonal partial least squares discriminant analysis (OPLS-DA) successfully generated prediction models across two cultivation regions. Integrating 8 machine-learning algorithms with multi-level data fusion identified 6 key variables-caffeine, Rb, Ce, δ¹⁵N, Sr, and 3"-O-acetylphlorizin. Five base learners built on these variables were then combined via soft-voting ensemble learning, yielding an optimal origin classifier with 100.00% accuracy. Additionally, the study delivered the first comprehensive analysis of quality variations in sweet tea and identified seven primary influenced environmental factors, offering insights into cultivation strategies and quality formation mechanisms.
甜茶(Lithocarpus litseifolius)是一种富含黄酮类化合物和必需营养素的药用和食用植物,具有作为保肝饮料和天然甜味剂的潜力。尽管在中国几个省份广泛种植,但其原材料的质量和一致性仍然监管不力。为了解决这一问题,来自7个主要产区的163份样品(n≥18)进行了22种功能化合物、4种稳定同位素比率和49种多元素的分析,以区分种植方式和地理来源。正交偏最小二乘判别分析(OPLS-DA)成功地建立了跨两个种植区的预测模型。将8种机器学习算法与多层次数据融合结合,识别出6个关键变量:咖啡因、Rb、Ce、δ¹5 N、Sr和3 ' ' - o -乙酰苯丙醇。然后通过软投票集成学习将基于这些变量的五个基本学习器组合在一起,产生具有100.00%准确率的最优起源分类器。此外,该研究首次全面分析了甜茶的品质差异,并确定了七个主要影响环境因素,为种植策略和品质形成机制提供了见解。
{"title":"Tracing origin and cultivation practice of Lithocarpus litseifolius via multi-data fusion and machine learning approaches.","authors":"Yifan Tang, Ping Yu, Feng Xiong, Zhilai Zhan, Kai Xie, Shuyan Yu, Yifan Ning, Zhanhan Zhou, Chun Wang, Weisen Qian, Xiwen Zhang, Yike Liang, Ruijiao Wang, Guoxia Han, Jian Yang","doi":"10.1038/s41538-026-00748-0","DOIUrl":"https://doi.org/10.1038/s41538-026-00748-0","url":null,"abstract":"<p><p>Lithocarpus litseifolius (sweet tea) is a medicinal and edible plant rich in flavonoids and essential nutrients, with potential as a hepatoprotective beverages and natural sweetener. Although widely cultivated across several provinces in China, the quality and consistency of its raw material remain poorly regulated. To address this, 163 samples (n ≥ 18) from 7 main producing regions were analyzed for 22 functional compounds, 4 stable isotope ratios, and 49 multi-element to discriminate cultivation practices and geographical origins. Orthogonal partial least squares discriminant analysis (OPLS-DA) successfully generated prediction models across two cultivation regions. Integrating 8 machine-learning algorithms with multi-level data fusion identified 6 key variables-caffeine, Rb, Ce, δ¹⁵N, Sr, and 3\"-O-acetylphlorizin. Five base learners built on these variables were then combined via soft-voting ensemble learning, yielding an optimal origin classifier with 100.00% accuracy. Additionally, the study delivered the first comprehensive analysis of quality variations in sweet tea and identified seven primary influenced environmental factors, offering insights into cultivation strategies and quality formation mechanisms.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146195191","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-11DOI: 10.1038/s41538-026-00747-1
Ivan K Chudinov, Anastasia A Krinitsina, Diana A Petukhova, Aleksandra V Lukina-Gronskaya, Elena V Korneenko, Veronika D Gremyacheva, Alexey V Kovalenko, Oleg V Fedorov, Grigory L Kozhemyakin, Kirill S Mironov, Maxim I Antipin, Ivan O Butenko, Maria D Logacheva, Anna S Speranskaya
Manufacturing adulteration is the major cause of discrepancies between the declared and actual composition of food products. While high-throughput sequencing (HTS) of DNA barcodes is a promising method to identify adulterants, its practical application is hampered by technical challenges. Food pre-processing and differences in GC composition can lead to unequal amplification or complete loss of DNA barcode components. Consequently, HTS results require independent confirmation using an orthogonal method based on very different physical principles than DNA sequencing. To address this, we evaluated the suitability of a multi-omic approach that coupled DNA barcode HTS analysis with proteomic analysis, to enhance the detection of food fraud in herbal beverages. To resolve discrepancies between genomic and proteomic findings, we employed traditional botanical morphology as an arbiter. Among the samples studied, the combined approach revealed two main adulterations of Epilobium with Lythrum - a substitution potentially hazardous to consumers - as well as several minor substitutions, all confirmed by orthogonal methods. Our findings demonstrate that proteomic analysis provides enhanced confidence for verifying the presence or absence of plant components identified by HTS. However, its effective application is guided by prior sequencing to define specific targets for subsequent proteomic verification. This study established that a multimodal analytical approach is not only beneficial, but essential for the reliable and comprehensive characterization of components in complex plant mixtures.
{"title":"Proteogenomic investigation of plant constituents in herbal beverages.","authors":"Ivan K Chudinov, Anastasia A Krinitsina, Diana A Petukhova, Aleksandra V Lukina-Gronskaya, Elena V Korneenko, Veronika D Gremyacheva, Alexey V Kovalenko, Oleg V Fedorov, Grigory L Kozhemyakin, Kirill S Mironov, Maxim I Antipin, Ivan O Butenko, Maria D Logacheva, Anna S Speranskaya","doi":"10.1038/s41538-026-00747-1","DOIUrl":"https://doi.org/10.1038/s41538-026-00747-1","url":null,"abstract":"<p><p>Manufacturing adulteration is the major cause of discrepancies between the declared and actual composition of food products. While high-throughput sequencing (HTS) of DNA barcodes is a promising method to identify adulterants, its practical application is hampered by technical challenges. Food pre-processing and differences in GC composition can lead to unequal amplification or complete loss of DNA barcode components. Consequently, HTS results require independent confirmation using an orthogonal method based on very different physical principles than DNA sequencing. To address this, we evaluated the suitability of a multi-omic approach that coupled DNA barcode HTS analysis with proteomic analysis, to enhance the detection of food fraud in herbal beverages. To resolve discrepancies between genomic and proteomic findings, we employed traditional botanical morphology as an arbiter. Among the samples studied, the combined approach revealed two main adulterations of Epilobium with Lythrum - a substitution potentially hazardous to consumers - as well as several minor substitutions, all confirmed by orthogonal methods. Our findings demonstrate that proteomic analysis provides enhanced confidence for verifying the presence or absence of plant components identified by HTS. However, its effective application is guided by prior sequencing to define specific targets for subsequent proteomic verification. This study established that a multimodal analytical approach is not only beneficial, but essential for the reliable and comprehensive characterization of components in complex plant mixtures.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146166190","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-11DOI: 10.1038/s41538-026-00750-6
Kit-Leong Cheong, Eric Biney, Min Wang, Hai-Jing Zhong, Saiyi Zhong, Malairaj Sathuvan
Polysaccharides are structurally diverse biopolymers that interact intimately with the colonic mucus barrier, modulating its physicochemical properties and biological functions. This review explores direct and indirect interactions between polysaccharides and colonic mucus that collectively shape mucus rheology, penetrability, and barrier function. After brief, separate descriptions of colonic mucus (bilayered architecture and goblet cell-driven secretion) and polysaccharide structural classes (e.g., charge, molecular weight, branching, and substitution patterns), we dissect the molecular and biophysical mechanisms governing polysaccharide-mucus interactions-including electrostatic and hydrogen bonding, hydrophobic association, and steric or depletion effects-and integrate evidence from in vitro, ex vivo, in vivo, organoid, and gut-on-a-chip models. Functional consequences for mucin secretion and degradation, mucus viscosity and structure, barrier integrity, and epithelial and immune signalling are critically evaluated, with particular focus on protection against oxidative stress-induced mucosal dysfunction. By linking specific physicochemical features of polysaccharides to their behaviour within the mucus barrier, we outline design principles for improving gastrointestinal health, optimising mucosal drug delivery, and guiding the development of next-generation polysaccharide-based therapeutics.
{"title":"Polysaccharides and the colon mucus barrier: a review of biophysical interactions and functional impacts.","authors":"Kit-Leong Cheong, Eric Biney, Min Wang, Hai-Jing Zhong, Saiyi Zhong, Malairaj Sathuvan","doi":"10.1038/s41538-026-00750-6","DOIUrl":"https://doi.org/10.1038/s41538-026-00750-6","url":null,"abstract":"<p><p>Polysaccharides are structurally diverse biopolymers that interact intimately with the colonic mucus barrier, modulating its physicochemical properties and biological functions. This review explores direct and indirect interactions between polysaccharides and colonic mucus that collectively shape mucus rheology, penetrability, and barrier function. After brief, separate descriptions of colonic mucus (bilayered architecture and goblet cell-driven secretion) and polysaccharide structural classes (e.g., charge, molecular weight, branching, and substitution patterns), we dissect the molecular and biophysical mechanisms governing polysaccharide-mucus interactions-including electrostatic and hydrogen bonding, hydrophobic association, and steric or depletion effects-and integrate evidence from in vitro, ex vivo, in vivo, organoid, and gut-on-a-chip models. Functional consequences for mucin secretion and degradation, mucus viscosity and structure, barrier integrity, and epithelial and immune signalling are critically evaluated, with particular focus on protection against oxidative stress-induced mucosal dysfunction. By linking specific physicochemical features of polysaccharides to their behaviour within the mucus barrier, we outline design principles for improving gastrointestinal health, optimising mucosal drug delivery, and guiding the development of next-generation polysaccharide-based therapeutics.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146166241","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Antarctic krill oil (KO) is a richsource of omega-3 polyunsaturated fatty acids (PUFAs). Endogenous PUFA-derived specialized pro-resolving mediators (SPMs) have garnered attention due to their beneficial effects on body, especially the cardiovascular system. This study integrated non-targeted and targeted lipidomics to investigate KO's time-dependent effects on the comprehensive lipid profile and SPMs in rats. After 1- and 6-week supplementation, KO significantly altered lipid profiles, reducing arachidonic acid (ARA, 20:4)-containing lipids while elevating eicosapentaenoic acid (EPA, 20:5)/docosahexaenoic acid (DHA, 22:6)-containing lipids. Targeted analysis identified and quantified 33 PUFA-derived oxylipins, including derivatives of ARA, 8 derivatives of EPA, and 13 derivatives of DHA. Notably, KO consumption substantially decreased pro-inflammatory oxylipins like LTB4, PGE2, and TXB2, while increasing anti-inflammatory LXA4 and SPMs such as RvE1, RvE2, RvD1, RvD4, and MaR1. Long-term intake amplified SPM accumulation, suggesting temporal regulation. These findings elucidate KO's potential mechanism in inflammation management through lipidome remodeling, supporting its application in functional foods for metabolic health enhancement.
{"title":"Effects of Antarctic krill oil on lipid profiles and SPM levels in rats over time.","authors":"Weibo Lu, Ning Huangfu, Lijun Ge, Huixiang Wu, Shitong Wang, Jiahui Wu, Jing Xue, Chunlai Zeng, Tianming Xuan, Liqun Cui, Jianliang Zhang, Linhua Wang, Qingcheng Wang, Jie Yuan, Hongqiang Wang, Hong Yuan, Xinghua Bai, Huamin Yu, Xi Chen, Qing Shen, Keyun Cheng","doi":"10.1038/s41538-026-00727-5","DOIUrl":"https://doi.org/10.1038/s41538-026-00727-5","url":null,"abstract":"<p><p>Antarctic krill oil (KO) is a richsource of omega-3 polyunsaturated fatty acids (PUFAs). Endogenous PUFA-derived specialized pro-resolving mediators (SPMs) have garnered attention due to their beneficial effects on body, especially the cardiovascular system. This study integrated non-targeted and targeted lipidomics to investigate KO's time-dependent effects on the comprehensive lipid profile and SPMs in rats. After 1- and 6-week supplementation, KO significantly altered lipid profiles, reducing arachidonic acid (ARA, 20:4)-containing lipids while elevating eicosapentaenoic acid (EPA, 20:5)/docosahexaenoic acid (DHA, 22:6)-containing lipids. Targeted analysis identified and quantified 33 PUFA-derived oxylipins, including derivatives of ARA, 8 derivatives of EPA, and 13 derivatives of DHA. Notably, KO consumption substantially decreased pro-inflammatory oxylipins like LTB<sub>4</sub>, PGE<sub>2</sub>, and TXB<sub>2</sub>, while increasing anti-inflammatory LXA<sub>4</sub> and SPMs such as RvE1, RvE2, RvD1, RvD4, and MaR1. Long-term intake amplified SPM accumulation, suggesting temporal regulation. These findings elucidate KO's potential mechanism in inflammation management through lipidome remodeling, supporting its application in functional foods for metabolic health enhancement.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146157635","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-09DOI: 10.1038/s41538-026-00749-z
Guoqing Ma, Yunfeng Li, Chen He, Junqi Li, Jiawen Xie, Maab Mohammed Alballa, Kun Xu, Xinran Feng, Juan He, Kaizhen Jia, Yifei He, Wei Li, Fangyao Chen, Baibing Mi, Jiaomei Yang, Hang Yu, Xia Liao, Baoming Zhang, Nan Yang, Quanfeng Dong, Qian Wang, Xiaolei Ze, Xin Liu
In this 12-week trial, 136 participants with moderately dyslipidemia were randomly assigned to receive Lactiplantibacillus plantarum (LP) or placebo. In the intention-to-treat analysis, the group-by-time interaction did not reach statistical significance. However, in per-protocol set (adherence ≥85% and no antibiotic use), LP supplementation reduced low-density lipoprotein cholesterol (LDL-C) (-0.118 mmol/L) and total cholesterol (TC) (-0.163 mmol/L), compared with the placebo (both Pgroup×time < 0.05). Post-intervention group differences were identified in gut microbial genera and species, correlated with changes in bile acids, which in turn were jointly related to lipid reduction. Microbiota-based machine learning models well-predicted the lipid reductions. Subjects with lower genetic risk scores experienced large decreases in LDL-C (Mean ± SD: -0.749 ± 0.632 mmol/L) and TC (-1.306 ± 0.436 mmol/L) (both Ptrend and Pinteraction < 0.001). Our data supported the beneficial effects of LP in patients with moderate dyslipidemia involving gut microbiota and host genetics.
{"title":"Effects of Lactiplantibacillus plantarum on moderate dyslipidemia before medication involving gut microbiota and host genetics.","authors":"Guoqing Ma, Yunfeng Li, Chen He, Junqi Li, Jiawen Xie, Maab Mohammed Alballa, Kun Xu, Xinran Feng, Juan He, Kaizhen Jia, Yifei He, Wei Li, Fangyao Chen, Baibing Mi, Jiaomei Yang, Hang Yu, Xia Liao, Baoming Zhang, Nan Yang, Quanfeng Dong, Qian Wang, Xiaolei Ze, Xin Liu","doi":"10.1038/s41538-026-00749-z","DOIUrl":"https://doi.org/10.1038/s41538-026-00749-z","url":null,"abstract":"<p><p>In this 12-week trial, 136 participants with moderately dyslipidemia were randomly assigned to receive Lactiplantibacillus plantarum (LP) or placebo. In the intention-to-treat analysis, the group-by-time interaction did not reach statistical significance. However, in per-protocol set (adherence ≥85% and no antibiotic use), LP supplementation reduced low-density lipoprotein cholesterol (LDL-C) (-0.118 mmol/L) and total cholesterol (TC) (-0.163 mmol/L), compared with the placebo (both P<sub>group×time</sub> < 0.05). Post-intervention group differences were identified in gut microbial genera and species, correlated with changes in bile acids, which in turn were jointly related to lipid reduction. Microbiota-based machine learning models well-predicted the lipid reductions. Subjects with lower genetic risk scores experienced large decreases in LDL-C (Mean ± SD: -0.749 ± 0.632 mmol/L) and TC (-1.306 ± 0.436 mmol/L) (both P<sub>trend</sub> and P<sub>interaction</sub> < 0.001). Our data supported the beneficial effects of LP in patients with moderate dyslipidemia involving gut microbiota and host genetics.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146150317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-09DOI: 10.1038/s41538-026-00741-7
Ting Yu Yeh, Deniz Turan
Food packaging is critical for ensuring food safety, quality, and shelf life. However, growing environmental concerns with conventional plastics drive the search for sustainable alternatives. A major challenge is that many biobased and biodegradable materials show poor barrier properties, limiting their use for food. This study provides a proof-of-concept for classifying sustainable packaging materials by clustering oxygen transmission rate (OTR) and water vapor transmission rate (WVTR) data. A dataset from 49 studies (2000 to 2016) was analyzed using K-Means, Gaussian Mixture Model (GMM), and Density-Based Spatial Clustering of Applications with Noise (DBSCAN). DBSCAN emerged as best performing algorithm, achieving the highest Silhouette Score (0.910) and lowest Davies-Bouldin Index (0.374). Results validated that while many sustainable films exhibit high permeability, nanocomposites achieved improved barrier performance. This data-driven framework demonstrates clustering as a tool for systematic grouping of packaging materials, with future work requiring broader datasets, industrial benchmarks, and standardized reporting for practical application.
{"title":"Mapping gas permeability of sustainable packaging materials to link food barrier needs by clustering algorithms.","authors":"Ting Yu Yeh, Deniz Turan","doi":"10.1038/s41538-026-00741-7","DOIUrl":"https://doi.org/10.1038/s41538-026-00741-7","url":null,"abstract":"<p><p>Food packaging is critical for ensuring food safety, quality, and shelf life. However, growing environmental concerns with conventional plastics drive the search for sustainable alternatives. A major challenge is that many biobased and biodegradable materials show poor barrier properties, limiting their use for food. This study provides a proof-of-concept for classifying sustainable packaging materials by clustering oxygen transmission rate (OTR) and water vapor transmission rate (WVTR) data. A dataset from 49 studies (2000 to 2016) was analyzed using K-Means, Gaussian Mixture Model (GMM), and Density-Based Spatial Clustering of Applications with Noise (DBSCAN). DBSCAN emerged as best performing algorithm, achieving the highest Silhouette Score (0.910) and lowest Davies-Bouldin Index (0.374). Results validated that while many sustainable films exhibit high permeability, nanocomposites achieved improved barrier performance. This data-driven framework demonstrates clustering as a tool for systematic grouping of packaging materials, with future work requiring broader datasets, industrial benchmarks, and standardized reporting for practical application.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146150366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-09DOI: 10.1038/s41538-025-00695-2
Bojana D Blagojević, Sophie Brunel-Muguet, Rada Šućur, Velimir Mladenov, Igor Balaž, Johann Vollmann, Vasileios Fotopoulos, Karsten Mäder
Growing demands for healthier diets are driving agricultural and food scientists to develop climate-resilient crops and food systems that ensure nutritionally effective food. Beyond providing basic energy requirements, nutrients may actively influence human physiology and health. One such molecule, spermidine, a polyamine abundant in wheat and soybean, has attracted particular interest. From the aspect of human health, spermidine is mainly studied for healthy ageing properties and has been associated with cardioprotective, neuroprotective, and anti-cancerogenic effects. On the other hand, being present in all plants, spermidine is essential for growth, development, and stress adaptation. Endogenously or when exogenously applied, spermidine can help plants adapt to harsh climate change conditions. Bringing together current knowledge on the significance of spermidine in both plants and humans, this review aims to trace its journey From Farm to Pharm, highlighting its importance for sustainable crop production, improved nutrition, and emerging pharmacological applications.
{"title":"The role of spermidine in plants and humans: a pathway from climate change adaptation to health benefits.","authors":"Bojana D Blagojević, Sophie Brunel-Muguet, Rada Šućur, Velimir Mladenov, Igor Balaž, Johann Vollmann, Vasileios Fotopoulos, Karsten Mäder","doi":"10.1038/s41538-025-00695-2","DOIUrl":"10.1038/s41538-025-00695-2","url":null,"abstract":"<p><p>Growing demands for healthier diets are driving agricultural and food scientists to develop climate-resilient crops and food systems that ensure nutritionally effective food. Beyond providing basic energy requirements, nutrients may actively influence human physiology and health. One such molecule, spermidine, a polyamine abundant in wheat and soybean, has attracted particular interest. From the aspect of human health, spermidine is mainly studied for healthy ageing properties and has been associated with cardioprotective, neuroprotective, and anti-cancerogenic effects. On the other hand, being present in all plants, spermidine is essential for growth, development, and stress adaptation. Endogenously or when exogenously applied, spermidine can help plants adapt to harsh climate change conditions. Bringing together current knowledge on the significance of spermidine in both plants and humans, this review aims to trace its journey From Farm to Pharm, highlighting its importance for sustainable crop production, improved nutrition, and emerging pharmacological applications.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":"68"},"PeriodicalIF":7.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12917199/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146150369","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study aimed to identify novel saltiness-enhancing peptides derived from Pleurotus eryngii and evaluate their influence on saltiness perception. Utilizing an integrated virtual screening strategy, 6 candidate peptides exhibiting potential saltiness-enhancing properties were identified. Sensory analysis revealed that these peptides displayed distinct taste profiles, with detection thresholds ranging between 0.04 and 0.12 mmol/L. Notably, peptides AGHDDFP, GYDTF, and NGYDMR enhanced the saltiness of a 3 mg/mL NaCl solution, demonstrating synergistic or additive effects, consistent with electronic tongue. Molecular docking analysis revealed that three saltiness-enhancing peptides primarily interacted with TMC4 through hydrogen bonding, identifying key interaction residues including Gln527, Glu531, Asp491, Asn404, Arg437, Lys567, Pro409, and Val498. Subsequent molecular dynamics simulations confirmed the structural stability and tightness of saltiness-enhancing peptides-TMC4 complexes, supporting their potential effectiveness in modulating saltiness perception. These results indicate a promising approach for identifying saltiness-enhancing peptides derived from Pleurotus eryngii, potentially serving as taste modulators in reduced-sodium food formulations.
{"title":"Characterization of saltiness-enhancing peptides from Pleurotus eryngii: identification, sensory evaluations, and mechanism of saltiness-enhancing.","authors":"Min Yang, Wei Wang, Biyang Zhu, Changli Zeng, Aimin Ma, Hongbo Wang, Danyun Xu","doi":"10.1038/s41538-025-00681-8","DOIUrl":"10.1038/s41538-025-00681-8","url":null,"abstract":"<p><p>This study aimed to identify novel saltiness-enhancing peptides derived from Pleurotus eryngii and evaluate their influence on saltiness perception. Utilizing an integrated virtual screening strategy, 6 candidate peptides exhibiting potential saltiness-enhancing properties were identified. Sensory analysis revealed that these peptides displayed distinct taste profiles, with detection thresholds ranging between 0.04 and 0.12 mmol/L. Notably, peptides AGHDDFP, GYDTF, and NGYDMR enhanced the saltiness of a 3 mg/mL NaCl solution, demonstrating synergistic or additive effects, consistent with electronic tongue. Molecular docking analysis revealed that three saltiness-enhancing peptides primarily interacted with TMC4 through hydrogen bonding, identifying key interaction residues including Gln527, Glu531, Asp491, Asn404, Arg437, Lys567, Pro409, and Val498. Subsequent molecular dynamics simulations confirmed the structural stability and tightness of saltiness-enhancing peptides-TMC4 complexes, supporting their potential effectiveness in modulating saltiness perception. These results indicate a promising approach for identifying saltiness-enhancing peptides derived from Pleurotus eryngii, potentially serving as taste modulators in reduced-sodium food formulations.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":"39"},"PeriodicalIF":7.8,"publicationDate":"2026-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12887059/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146132009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-07DOI: 10.1038/s41538-026-00745-3
Hannah Mann, Akansha Prasad, Raveenaa Uthayasekaram, Kyle Jackson, Zeinab Hosseinidoust, Carlos D M Filipe, Tohid F Didar
Due to the significant healthcare burden associated with foodborne illness, developing platforms suitable for the on-site detection of food pathogens is of critical importance to public health. Low-cost, equipment-free approaches are desired to allow for point-of-use contamination monitoring along the food supply chain. Here, we demonstrate the compatibility of an Escherichia coli responsive colorimetric DNAzyme-crosslinked hydrogel sensor with a wide range of food products. Sensor functionality involves an E. coli detecting DNAzyme-substrate complex that cleaves the hydrogel crosslinking in the presence of the target bacteria, resulting in a release of gold nanoparticles that is visible to the naked eye. Naked-eye detection of E. coli at concentrations of 105 CFU mL-1 has been shown in milk as well as samples extracted from produce, leafy greens, and ready-to-eat foods such as rotisserie chickens. The functionality, simplicity, and versatility of this sensing platform may improve the feasibility of frequent pathogen monitoring in the food production pipeline, with the potential to mitigate future outbreaks of foodborne illness.
{"title":"Point-of-use colorimetric detection of Escherichia coli in food matrices with DNAzyme crosslinked hydrogels.","authors":"Hannah Mann, Akansha Prasad, Raveenaa Uthayasekaram, Kyle Jackson, Zeinab Hosseinidoust, Carlos D M Filipe, Tohid F Didar","doi":"10.1038/s41538-026-00745-3","DOIUrl":"https://doi.org/10.1038/s41538-026-00745-3","url":null,"abstract":"<p><p>Due to the significant healthcare burden associated with foodborne illness, developing platforms suitable for the on-site detection of food pathogens is of critical importance to public health. Low-cost, equipment-free approaches are desired to allow for point-of-use contamination monitoring along the food supply chain. Here, we demonstrate the compatibility of an Escherichia coli responsive colorimetric DNAzyme-crosslinked hydrogel sensor with a wide range of food products. Sensor functionality involves an E. coli detecting DNAzyme-substrate complex that cleaves the hydrogel crosslinking in the presence of the target bacteria, resulting in a release of gold nanoparticles that is visible to the naked eye. Naked-eye detection of E. coli at concentrations of 10<sup>5</sup> CFU mL<sup>-1</sup> has been shown in milk as well as samples extracted from produce, leafy greens, and ready-to-eat foods such as rotisserie chickens. The functionality, simplicity, and versatility of this sensing platform may improve the feasibility of frequent pathogen monitoring in the food production pipeline, with the potential to mitigate future outbreaks of foodborne illness.</p>","PeriodicalId":19367,"journal":{"name":"NPJ Science of Food","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2026-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146137464","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}