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Twenty years of integrated disease surveillance and response in Sub-Saharan Africa: challenges and opportunities for effective management of infectious disease epidemics. 撒哈拉以南非洲20年的综合疾病监测和应对:有效管理传染病流行病的挑战和机遇。
Pub Date : 2021-11-09 DOI: 10.1186/s42522-021-00052-9
Irene R Mremi, Janeth George, Susan F Rumisha, Calvin Sindato, Sharadhuli I Kimera, Leonard E G Mboera

Introduction: This systematic review aimed to analyse the performance of the Integrated Disease Surveillance and Response (IDSR) strategy in Sub-Saharan Africa (SSA) and how its implementation has embraced advancement in information technology, big data analytics techniques and wealth of data sources.

Methods: HINARI, PubMed, and advanced Google Scholar databases were searched for eligible articles. The review followed the Preferred Reporting Items for Systematic Reviews and Meta-Analysis Protocols.

Results: A total of 1,809 articles were identified and screened at two stages. Forty-five studies met the inclusion criteria, of which 35 were country-specific, seven covered the SSA region, and three covered 3-4 countries. Twenty-six studies assessed the IDSR core functions, 43 the support functions, while 24 addressed both functions. Most of the studies involved Tanzania (9), Ghana (6) and Uganda (5). The routine Health Management Information System (HMIS), which collects data from health care facilities, has remained the primary source of IDSR data. However, the system is characterised by inadequate data completeness, timeliness, quality, analysis and utilisation, and lack of integration of data from other sources. Under-use of advanced and big data analytical technologies in performing disease surveillance and relating multiple indicators minimises the optimisation of clinical and practice evidence-based decision-making.

Conclusions: This review indicates that most countries in SSA rely mainly on traditional indicator-based disease surveillance utilising data from healthcare facilities with limited use of data from other sources. It is high time that SSA countries consider and adopt multi-sectoral, multi-disease and multi-indicator platforms that integrate other sources of health information to provide support to effective detection and prompt response to public health threats.

引言:本系统综述旨在分析撒哈拉以南非洲(SSA)综合疾病监测和应对(IDSR)战略的绩效,以及其实施如何包含信息技术、大数据分析技术和丰富数据源的进步。方法:检索HINARI、PubMed和高级Google Scholar数据库中符合条件的文章。该综述遵循了系统综述和荟萃分析方案的首选报告项目。结果:共有1809篇文章在两个阶段被识别和筛选。45项研究符合纳入标准,其中35项针对具体国家,7项涉及SSA地区,3项涉及3-4个国家。26项研究评估了IDSR的核心职能,43项评估了支持职能,24项评估了这两项职能。大多数研究涉及坦桑尼亚(9)、加纳(6)和乌干达(5)。从医疗机构收集数据的常规健康管理信息系统(HMIS)一直是IDSR数据的主要来源。然而,该系统的特点是数据的完整性、及时性、质量、分析和利用不足,以及缺乏对其他来源数据的整合。在进行疾病监测和相关多个指标时,未充分使用先进的大数据分析技术,最大限度地减少了临床和实践循证决策的优化。结论:本综述表明,SSA中的大多数国家主要依赖传统的基于指标的疾病监测,利用医疗机构的数据来自其他来源的数据。SSA国家现在应该考虑并采用多部门、多疾病和多指标平台,整合其他卫生信息来源,为有效发现和及时应对公共卫生威胁提供支持。
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引用次数: 19
Antimicrobial resistance national level dialogue and action in Ghana: setting and sustaining the agenda and outcomes. 加纳抗菌素耐药性国家一级对话与行动:制定和维持议程和成果。
Pub Date : 2021-10-19 DOI: 10.1186/s42522-021-00051-w
Augustina Koduah, Martha Gyansa-Lutterodt, George Kwesi Hedidor, Reginald Sekyi-Brown, Michelle Asiedu-Danso, Brian Adu Asare, Angela Ama Ackon, Edith Andrews Annan

Background: Antimicrobial resistance (AMR) has gained national and international attention. The design and launch of national policy on antimicrobial use and resistance and action plan marked a milestone in Ghana's commitment to control AMR. These strategies are some outcomes of getting and sustaining AMR issues prominence on government's agenda. Understanding the agenda setting processes, policy actors involved and policy change is important as this provides insights on how and why policy actors defined and framed AMR issues to sustain its prominence despite the changing priorities of government agenda.

Objective: To examine the processes of setting and sustaining AMR issues on government agenda, the policy actors involved and resulting outcomes.

Methods: A qualitative study was conducted and data collected through interviewing twenty-four respondents and reviewing technical working group meeting reports and health sector documents. Data was analysed drawing on Kingdon's agenda setting framework.

Result: Members of a multisectoral technical working group (AMR platform) formed in 2011 constantly built consensus on AMR problem definition, solutions and actively engaged decision makers to mobilise support and interest. The AMR platform members sustained AMR attention and prominence on government's agenda through the following multisectoral coordination mechanisms: (1) institutionalising AMR platform activities (2) gathering evidence, sharing findings, and supporting research (3) creating awareness and training (4) gaining and maintaining political support. The activities of the AMR platform contributed to three remarkable outcomes and these are (1) maintained network of AMR Champions, (2) design of a national policy on antimicrobial use and resistance in Ghana (1st edition) and national action plan (2017-2021), and (3) Ghana's hosting of the second Global call to action on AMR.

Conclusion: The AMR platform members as influencers concentrated their efforts to move and sustain AMR issues on government agenda. The identified multisectoral coordination mechanisms collectively contributed to agenda setting processes and policy change. The AMR platform engagements are ongoing and it is important the momentum is maintained. As multisectoral coordination and activities are vital especially for AMR 'One Health' approach, we hope this paper presents lessons for better understanding of how and why multisectoral groups influence national level agenda setting processes.

背景:抗微生物药物耐药性(AMR)已引起国内外的关注。制定和启动关于抗菌素使用和耐药性的国家政策和行动计划标志着加纳致力于控制抗菌素耐药性的一个里程碑。这些策略是使抗菌素耐药性问题在政府议程上占据突出地位的一些结果。了解议程制定过程、政策参与者和政策变化是很重要的,因为这可以深入了解政策参与者如何以及为什么定义和框架AMR问题,以便在政府议程优先事项不断变化的情况下保持其突出地位。目的:研究在政府议程上设置和维持抗微生物药物耐药性问题的过程,所涉及的政策行为者和结果。方法:通过对24名受访者进行访谈,查阅技术工作组会议报告和卫生部门文件,进行定性研究并收集数据。根据金敦的议程设置框架分析了数据。结果:2011年成立的多部门技术工作组(AMR平台)成员不断就AMR问题定义和解决方案达成共识,并积极让决策者参与,以调动支持和兴趣。抗菌素耐药性平台成员通过以下多部门协调机制保持抗菌素耐药性在政府议程上的关注和突出地位:(1)将抗菌素耐药性平台活动制度化;(2)收集证据、分享发现和支持研究;(3)提高认识和培训;(4)获得和维持政治支持。抗微生物药物耐药性平台的活动促成了三个显著成果,即:(1)维持抗微生物药物耐药性倡导者网络;(2)设计了加纳抗微生物药物使用和耐药性国家政策(第一版)和国家行动计划(2017-2021年);(3)加纳主办了第二次抗微生物药物耐药性全球行动呼吁。结论:AMR平台成员作为有影响力的人集中精力推动和维持AMR问题在政府议程上。已确定的多部门协调机制共同促进了议程制定进程和政策改变。AMR平台的合作正在进行中,重要的是保持这种势头。由于多部门协调和活动是至关重要的,特别是对抗微生物药物耐药性“一个健康”方法而言,我们希望本文提供一些经验教训,以便更好地理解多部门团体如何以及为什么影响国家一级的议程制定进程。
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引用次数: 6
South-to-south mentoring as a vehicle for implementing sustainable health security in Africa. 南南指导作为在非洲实施可持续卫生安全的工具。
Pub Date : 2021-10-06 DOI: 10.1186/s42522-021-00050-x
Stephanie Marie Norlock, Patrick W Okanya, Anastasia Trataris, Michael E Hildebrand, Jean de Dieu Baziki, Imane Belkourati, Maureen Ellis

Background: While sustainability has become a universal precept in the development of global health security systems, supporting policies often lack mechanisms to drive policies into regular practice. 'On-paper' norms and regulations are to a great extent upheld by frontline workers who often lack the opportunity to communicate their first-hand experiences to decisionmakers; their role is an often overlooked, yet crucial, aspect of a sustainable global health security landscape. Initiatives and programs developing transdisciplinary professional skills support the increased bidirectional dialogue between these frontline workers and key policy- and decisionmakers which may sustainably narrow the gap between global health security policy design and implementation.

Methods: The International Federation of Biosafety Associations' (IFBA) Global Mentorship Program recruits biosafety and biosecurity champions across Africa to provide local peer mentorship to developing professionals in their geographic region. Mentors and mentees complete structured one year program cycles, where they are provided with written overviews of monthly discussion topics, and attend optional virtual interactive activities. Feedback from African participants of the 2019-2020 program cycle was collected using a virtual Exit Survey, where aspects of program impact and structure were assessed.

Results: Following its initial call for applications, the IFBA Global Mentorship Program received considerable interest from professionals across the African continent, particularly in East and North Africa. The pilot program cycle matched a total of 62 individuals from an array of professional disciplines across several regions, 40 of which were located on the African continent. The resulting mentorship pairs shared knowledge, skills, and experiences towards translating policy objectives to action on the front lines. Mentorship pairs embraced multidisciplinary approaches to harmonize health security strategies across the human and animal health sectors. South-to-South mentorship therefore provided mentees with locally relevant support critical to translation of best technical practices to local capacity and work.

Conclusion: The IFBA's South-to-South Global Mentorship Program has demonstrated its ability to form crucial links between frontline biosafety professionals, laboratory workers, and policy- and decision-makers across several implicated sectors. By supporting regionally relevant peer mentorship programs, the gap between health security policy development and implementation may be narrowed.

背景:虽然可持续性已成为全球卫生安全体系发展的普遍准则,但支持政策往往缺乏推动政策正常实施的机制。”纸面上的规范和规定在很大程度上得到了一线工作者的支持,他们往往缺乏向决策者传达第一手经验的机会;在可持续的全球卫生安全格局中,他们的作用是一个经常被忽视但至关重要的方面。发展跨学科专业技能的举措和计划有助于加强这些一线工作者与关键政策和决策者之间的双向对话,从而可持续地缩小全球卫生安全政策设计和实施之间的差距。方法:国际生物安全协会联合会(IFBA)的全球导师计划在非洲各地招募生物安全和生物安保冠军,为所在地理区域的发展中专业人员提供当地同行指导。导师和学员完成结构化的一年课程周期,每月向他们提供讨论主题的书面概述,并参加可选的虚拟互动活动。2019-2020年项目周期的非洲参与者的反馈是通过虚拟退出调查收集的,在该调查中评估了项目影响和结构的各个方面。结果:在最初的申请呼吁之后,IFBA全球导师计划受到了非洲大陆,特别是东非和北非专业人士的极大兴趣。试点项目周期共匹配了来自多个地区一系列专业学科的62人,其中40人位于非洲大陆。由此产生的指导配对分享了将政策目标转化为前线行动的知识、技能和经验。导师配对采用多学科方法,协调人类和动物卫生部门的卫生安全战略。因此,南南指导为学员提供了与当地相关的支持,这对将最佳技术实践转化为当地能力和工作至关重要。结论:IFBA的南南全球导师计划证明了其在一线生物安全专业人员、实验室工作人员以及几个相关部门的政策和决策者之间建立关键联系的能力。通过支持区域相关的同行指导计划,可以缩小卫生安全政策制定和实施之间的差距。
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引用次数: 2
The vital importance of a web of prevention for effective biosafety and biosecurity in the twenty-first century. 二十一世纪建立有效的生物安全和生物保障预防网至关重要。
Pub Date : 2021-09-20 DOI: 10.1186/s42522-021-00049-4
Tatyana A Novossiolova, Simon Whitby, Malcolm Dando, Graham S Pearson

Biological threats are complex and multifaceted, as evidenced by the ongoing COVID-19 pandemic. Their effective prevention and countering require multiple lines of collaborative action and sustained cross-sectorial coordination. This paper reviews the conclusions of Graham Pearson's 1997 JAMA article titled 'The Complementary Role of Environmental and Security Biological Control Regimes in the 21st Century', taking into account the international policy developments that have occurred over the past two decades. The paper underscores the utility of the concept of a 'web of prevention' for elucidating the need for continuous interaction between the international biosafety and international biosecurity regimes, in order to ensure that the life sciences are used only for peaceful purposes. The terms 'biosafety' and 'biosecurity' are used to denote the primary purpose of the two regimes: the international biosafety regime seeks to prevent the unintentional (accidental) release of pathogens and toxins, including naturally occurring disease, whereas the biosecurity regime seeks to prevent the deliberate release and misuse of pathogens and toxins. The paper concludes by recommending practical steps for strengthening the implementation of all elements of the web of prevention and upholding the norms against the hostile misuse of life sciences.

当前的COVID-19大流行证明了生物威胁是复杂和多方面的。有效预防和打击这些疾病需要多种合作行动和持续的跨部门协调。本文回顾了Graham Pearson 1997年在JAMA发表的题为“21世纪环境与安全生物控制制度的互补作用”的文章的结论,并考虑了过去二十年来发生的国际政策发展。这篇论文强调了“预防网”概念在阐明国际生物安全和国际生物安全制度之间持续互动的必要性方面的效用,以便确保生命科学仅用于和平目的。"生物安全"和"生物安全"这两个术语用来表示这两个制度的主要目的:国际生物安全制度力求防止病原体和毒素的无意(意外)释放,包括自然发生的疾病,而生物安全制度则力求防止病原体和毒素的故意释放和滥用。论文最后建议采取切实可行的步骤,加强实施预防网络的所有要素,并坚持反对恶意滥用生命科学的规范。
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引用次数: 6
Prevalence and epidemiological distribution of selected foodborne pathogens in human and different environmental samples in Ethiopia: a systematic review and meta-analysis. 埃塞俄比亚人类和不同环境样本中选定食源性病原体的患病率和流行病学分布:系统回顾和荟萃分析。
Pub Date : 2021-09-03 DOI: 10.1186/s42522-021-00048-5
Dinaol Belina, Yonas Hailu, Tesfaye Gobena, Tine Hald, Patrick Murigu Kamau Njage

Bacterial Foodborne Pathogens (FBP) are the commonest cause of foodborne illness or foodborne diseases (FBD) worldwide. They contaminate food at any stages in the entire food chain, from farm to dining-table. Among these, the Diarrheagenic Escherichia coli (DEC), Non typhoidal Salmonella (NTS), Shigella spp. and Campylobacter spp. are responsible for a large proportion of illnesses, deaths; and, particularly, as causes of acute diarrheal diseases. Though existing studies indicate the problem may be severe in developing countries like Ethiopia, the evidence is commonly based on fragmented data from individual studies. A review of published and unpublished manuscripts was conducted to obtain information on major FBP and identify the gaps in tracking their source attributions at the human, animal and environmental interface. A total of 1753 articles were initially retrieved after restricting the study period to between January 2000 and July 2020. After the second screening, only 51 articles on the humans and 43 on the environmental sample based studies were included in this review. In the absence of subgroups, overall as well as human stool and environmental sample based pooled prevalence estimate of FBP were analyzed. Since, substantial heterogeneity is expected, we also performed a subgroup analyses for principal study variables to estimate pooled prevalence of FBP at different epidemiological settings in both sample sources. The overall random pooled prevalence estimate of FBP (Salmonella, pathogenic Escherichia coli (E. coli), Shigella and Campylobacter spp.) was 8%; 95% CI: 6.5-8.7, with statistically higher (P <  0.01) estimates in environmental samples (11%) than in human stool (6%). The subgroup analysis depicted that Salmonella and pathogenic E. coli contributed to 5.7% (95% CI: 4.7-6.8) and 11.6% (95% CI: 8.8-15.1) respectively, of the overall pooled prevalence estimates of FBD in Ethiopia. The result of meta-regression showed, administrative regional state, geographic area of the study, source of sample and categorized sample size all significantly contributed to the heterogeneity of Salmonella and pathogenic E. coli estimates. Besides, the multivariate meta- regression indicated the actual study year between 2011 and 2015 was significantly associated with the environmental sample-based prevalence estimates of these FBP. This systematic review and meta-analysis depicted FBP are important in Ethiopia though majority of the studies were conducted separately either in human, animal or environmental samples employing routine culture based diagnostic method. Thus, further FBD study at the human, animal and environmental interface employing advanced diagnostic methods is needed to investigate source attributions of FBD in one health approach.

细菌性食源性病原体(FBP)是世界范围内食源性疾病或食源性疾病(FBD)的最常见原因。从农场到餐桌,它们在整个食物链的任何阶段都会污染食物。其中,腹泻性大肠杆菌(DEC)、非伤寒沙门氏菌(NTS)、志贺菌属和弯曲杆菌属是造成大量疾病和死亡的原因;尤其是作为急性腹泻疾病的病因。尽管现有研究表明,埃塞俄比亚等发展中国家的问题可能很严重,但证据通常基于个别研究的零散数据。对已发表和未发表的手稿进行了审查,以获得有关主要FBP的信息,并确定在人类、动物和环境界面追踪其来源归因方面的差距。在将研究期限限制在2000年1月至2020年7月之间后,最初共检索到1753篇文章。在第二次筛选后,本综述仅收录了51篇关于人类的文章和43篇关于基于环境样本的研究的文章。在没有亚组的情况下,分析了基于人类粪便和环境样本的FBP总患病率估计。由于预期存在显著的异质性,我们还对主要研究变量进行了亚组分析,以估计两个样本来源中不同流行病学环境下FBP的合并流行率。FBP(沙门氏菌、致病性大肠杆菌、志贺菌和弯曲杆菌属)的总体随机汇总患病率估计为8%;95%可信区间:6.5-8.7,具有统计学意义(P
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引用次数: 10
Circulating Brucella species in wild animals of the Serengeti ecosystem, Tanzania. 坦桑尼亚塞伦盖蒂生态系统野生动物中的循环布鲁氏菌物种。
Pub Date : 2021-08-24 DOI: 10.1186/s42522-021-00047-6
R M Sambu, C Mathew, H E Nonga, A S Lukambagire, R B Yapi, J Akoko, G Fokou, J D Keyyu, B Bonfoh, R R Kazwala

Background: Brucellosis is a bacterial zoonosis of public health and economic importance worldwide. It affects a number of domestic animals, wild animals and humans. Human brucellosis originates from either livestock or wildlife. The species of Brucella circulating in wild animals in Tanzania is largely unknown due to insufficient surveillance. This study was carried out to identify Brucella species found in selected wildlife hosts in the Serengeti ecosystem.

Methodology: The study used a total of 189 archived samples that were obtained from cross-sectional studies previously conducted between 2000 and 2017 in the Serengeti ecosystem in Tanzania. Whole blood, serum and amniotic fluid collected from buffalos, lions, wildebeest, impala, zebra and hyena were available for DNA extraction. Multiplex polymerase chain reaction for B. abortus, B. melitensis, B. ovis and B. suis (AMOS PCR) and quantitative real-time PCR (qPCR) targeting the bcsp31 and IS711 genes for Brucella genus detection and the IS711 targets alkB for B. abortus and BMEI1162 for B. melitensis were used to detect Brucella strains.

Results: Out of the 189 samples tested, 12 (6.35 %) and 22 (11.6 %) were positive to AMOS-PCR and qPCR, respectively. Most of the positive samples were from lions (52.6 %) and buffaloes (19.6 %). Other animals that were positive included: wildebeest (13.6 %), impala (13.6 %), zebra (4.5 %) and hyena (4.5 %). Out of 22 positive samples, 16 (66.7 %) were identified as B. abortus and the other six samples did not amplify for neither B. abortus nor B. melitensis.

Conclusions: The detection of Brucella DNA in archived wild animal samples shows testing potential of samples collected from this population. The zoonotic species B. abortus and B. melitensis detected in wild animals have previously been reported in livestock and humans in the region. The findings suggest that, due to the contact network, some of the identified wild animal hosts in this study could be reservoirs for infections in domestic animals and humans within the Serengeti ecosystem while others are likely dead-end hosts. One Health control strategies and continuous surveillance programs in other wildlife reserved areas should be implemented to help predicting transmission in livestock and humans in the region.

背景:布鲁氏菌病是一种在世界范围内具有公共卫生和经济重要性的细菌性人畜共患疾病。它影响了许多家畜、野生动物和人类。人类布鲁氏菌病源于牲畜或野生动物。由于监测不足,在坦桑尼亚野生动物中传播的布鲁氏菌的种类在很大程度上是未知的。本研究旨在确定在塞伦盖蒂生态系统中选定的野生动物宿主中发现的布鲁氏菌物种。方法:该研究共使用了189个存档样本,这些样本是从2000年至2017年间在坦桑尼亚塞伦盖蒂生态系统进行的横断面研究中获得的。从水牛、狮子、角马、黑斑羚、斑马和鬣狗身上采集的全血、血清和羊水可用于DNA提取。采用流产B.B.melitensis,B.ovis和B.suis的多重聚合酶链式反应(AMOS PCR)和针对bcsp31和IS711基因的定量实时PCR(qPCR)检测布鲁氏菌属,以及针对流产B.alkB和针对B.meliteensis的IS711靶点BMEI1162检测布鲁氏杆菌菌株。结果:在189个测试样本中,12个(6.35 %) 和22(11.6 %) AMOS-PCR和qPCR阳性。大多数阳性样本来自狮子(52.6 %) 和水牛(19.6 %). 其他呈阳性的动物包括:角马(13.6 %), 黑斑羚(13.6 %), 斑马(4.5 %) 和鬣狗(4.5 %). 在22个阳性样本中,16个(66.7 %) 被鉴定为流产B.abortus,而其他六个样品既没有扩增出流产B.aboratus也没有扩增出melitensis。结论:在存档的野生动物样本中检测布鲁氏菌DNA显示了从该种群采集的样本的检测潜力。在野生动物中检测到的人畜共患物种B.abortus和B.melitensis此前曾在该地区的牲畜和人类中报告过。研究结果表明,由于接触网络,本研究中确定的一些野生动物宿主可能是塞伦盖蒂生态系统中家畜和人类感染的宿主,而其他宿主可能是死胡同宿主。应在其他野生动物保护区实施健康控制策略和持续监测计划,以帮助预测该地区牲畜和人类的传播。
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引用次数: 0
Prevalence of dog-mediated rabies in Ethiopia: a systematic review and Meta-analysis from 2010 to 2020. 埃塞俄比亚犬媒狂犬病流行情况:2010 年至 2020 年系统回顾和元分析。
Pub Date : 2021-08-04 DOI: 10.1186/s42522-021-00046-7
Shiret Belete, Melke Meseret, Haileyesus Dejene, Ayalew Assefa

Background: Ethiopia accommodates the second largest number of human rabies deaths in Africa. This systematic review and meta-analysis aimed to summarize and pool estimates of dog-mediated rabies status in Ethiopia.

Methods: Published researches between 2010 and 2020 were comprehensively searched and the required information was extracted. The prevalence was estimated using the random-effects meta-analysis because higher heterogeneity between studies was expected.

Results: The pooled estimate of rabies was 32% (95% CI: 19-46%), with individual study prevalence estimates ranged from 1 to 78%. Studies were approximately weighted equally with individual weight ranging from 5.19-5.28%. Subgroup analysis indicated that the random pooled prevalence of rabies was 28% (95% CI: 0-81%) in animals and 33% (95% CI: 20-47%) in humans. Furthermore, a subgroup analysis across regions indicated that the pooled prevalence was 78% in Addis Ababa, 46% in Oromia, 40% in Tigray and 5% in Amhara regional states. No single study was reported from the country's eastern and southern parts to be included in this meta-analysis.

Conclusion: The estimated pooled rabies prevalence was found high and showed varying among study regions. Therefore, focusing on mass dog vaccination campaigns and public awareness should be implemented to control the disease.

背景:埃塞俄比亚是非洲人类狂犬病死亡人数第二多的国家。本系统综述和荟萃分析旨在总结和汇集埃塞俄比亚由犬介导的狂犬病状况的估计值:全面检索了 2010 年至 2020 年间发表的研究报告,并提取了所需信息。由于预计研究之间的异质性较高,因此采用随机效应荟萃分析法估算患病率:狂犬病的汇总估计值为 32%(95% CI:19-46%),单个研究的流行率估计值介于 1% 与 78% 之间。各项研究的权重大致相当,单项权重在 5.19-5.28% 之间。分组分析表明,狂犬病的随机汇总流行率在动物中为 28%(95% CI:0-81%),在人类中为 33%(95% CI:20-47%)。此外,跨地区分组分析表明,亚的斯亚贝巴的综合发病率为 78%,奥罗莫州为 46%,提格雷州为 40%,阿姆哈拉州为 5%。该国东部和南部地区没有任何研究报告被纳入此次荟萃分析:结论:经汇总的狂犬病发病率估计值较高,且各研究地区之间存在差异。因此,应重点开展大规模的狗疫苗接种活动和提高公众意识,以控制狂犬病。
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引用次数: 0
Informing resilience building: FAO's Surveillance Evaluation Tool (SET) Biothreat Detection Module will help assess national capacities to detect agro-terrorism and agro-crime. 为抗灾能力建设提供信息:粮农组织的监测评估工具(SET)生物威胁检测模块将有助于评估国家检测农业恐怖主义和农业犯罪的能力。
Pub Date : 2021-07-19 DOI: 10.1186/s42522-021-00045-8
Gisela Vasconcelos Gioia, Gaël Lamielle, Ryan Aguanno, Ihab ElMasry, Béatrice Mouillé, Cristian De Battisti, Angélique Angot, Fanny Ewann, Adrien Sivignon, Daniel Donachie, Orr Rozov, Étienne Bonbon, Frédéric Poudevigne, Sophie VonDobschuetz, Ludovic Plée, Wantanee Kalpravidh, Keith Sumption

Attacks using animal pathogens can have devastating socioeconomic, public health and national security consequences. The livestock sector has some inherent vulnerabilities which put it at risk to the deliberate or accidental spread of disease. The growing concern of countries about the risks of agro-terrorism and agro-crime has led to efforts to prepare against potential attacks. One recent international effort is the launch of a joint OIE, FAO and INTERPOL project in 2019 to build resilience against agro-terrorism and agro-crime targeting animal health with the financial support of the Weapons Threat Reduction Programme of Global Affairs Canada. Given the importance of strong animal health surveillance systems for the early and effective response to agro-terrorism and agro-crime, the project will use the FAO Surveillance Evaluation Tool (SET) and its new Biothreat Detection Module to evaluate beneficiary countries' capacities to detect criminal or terrorist animal health events. This paper presents the development of the new SET Biothreat Detection Module and how it will be used to evaluate surveillance for agro-terrorism and agro-crime animal disease threats. The module will be piloted in early 2021 and, once finalized, will be used by beneficiary countries of the joint OIE-FAO-INTERPOL project. Results from evaluations using SET and its Biothreat Detection Module are expected to provide a baseline from which countries can build targeted capacity for animal disease surveillance including early detection and investigation of potential terrorist or criminal events involving zoonotic and non-zoonotic animal pathogens.

利用动物病原体发动攻击可能会造成毁灭性的社会经济、公共卫生和国家安全后果。畜牧业具有一些固有的脆弱性,使其面临故意或意外传播疾病的风险。各国对农业恐怖主义和农业犯罪风险的日益关注促使各国努力防范潜在的袭击。最近的一项国际努力是,在加拿大全球事务减少武器威胁方案的财政支持下,于2019年启动了世界动物卫生组织、粮农组织和国际刑警组织的联合项目,以建立抵御以动物卫生为目标的农业恐怖主义和农业犯罪的能力。鉴于强大的动物卫生监测系统对于及早有效应对农业恐怖主义和农业犯罪的重要性,该项目将使用粮农组织监测评估工具及其新的生物威胁检测模块来评估受惠国发现犯罪或恐怖主义动物卫生事件的能力。本文介绍了新的SET生物威胁检测模块的开发,以及如何将其用于评估对农业恐怖主义和农业犯罪动物疾病威胁的监测。该模块将于2021年初试行,一旦最终确定,将由世界动物卫生组织-粮农组织-国际刑警组织联合项目的受益国使用。使用生物威胁检测技术及其生物威胁检测模块的评估结果预计将提供一个基线,各国可据此建立有针对性的动物疾病监测能力,包括早期发现和调查涉及人畜共患和非人畜共患动物病原体的潜在恐怖主义或犯罪事件。
{"title":"Informing resilience building: FAO's Surveillance Evaluation Tool (SET) Biothreat Detection Module will help assess national capacities to detect agro-terrorism and agro-crime.","authors":"Gisela Vasconcelos Gioia,&nbsp;Gaël Lamielle,&nbsp;Ryan Aguanno,&nbsp;Ihab ElMasry,&nbsp;Béatrice Mouillé,&nbsp;Cristian De Battisti,&nbsp;Angélique Angot,&nbsp;Fanny Ewann,&nbsp;Adrien Sivignon,&nbsp;Daniel Donachie,&nbsp;Orr Rozov,&nbsp;Étienne Bonbon,&nbsp;Frédéric Poudevigne,&nbsp;Sophie VonDobschuetz,&nbsp;Ludovic Plée,&nbsp;Wantanee Kalpravidh,&nbsp;Keith Sumption","doi":"10.1186/s42522-021-00045-8","DOIUrl":"https://doi.org/10.1186/s42522-021-00045-8","url":null,"abstract":"<p><p>Attacks using animal pathogens can have devastating socioeconomic, public health and national security consequences. The livestock sector has some inherent vulnerabilities which put it at risk to the deliberate or accidental spread of disease. The growing concern of countries about the risks of agro-terrorism and agro-crime has led to efforts to prepare against potential attacks. One recent international effort is the launch of a joint OIE, FAO and INTERPOL project in 2019 to build resilience against agro-terrorism and agro-crime targeting animal health with the financial support of the Weapons Threat Reduction Programme of Global Affairs Canada. Given the importance of strong animal health surveillance systems for the early and effective response to agro-terrorism and agro-crime, the project will use the FAO Surveillance Evaluation Tool (SET) and its new Biothreat Detection Module to evaluate beneficiary countries' capacities to detect criminal or terrorist animal health events. This paper presents the development of the new SET Biothreat Detection Module and how it will be used to evaluate surveillance for agro-terrorism and agro-crime animal disease threats. The module will be piloted in early 2021 and, once finalized, will be used by beneficiary countries of the joint OIE-FAO-INTERPOL project. Results from evaluations using SET and its Biothreat Detection Module are expected to provide a baseline from which countries can build targeted capacity for animal disease surveillance including early detection and investigation of potential terrorist or criminal events involving zoonotic and non-zoonotic animal pathogens.</p>","PeriodicalId":19490,"journal":{"name":"One Health Outlook","volume":"3 1","pages":"14"},"PeriodicalIF":0.0,"publicationDate":"2021-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s42522-021-00045-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39197974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Two decades of one health surveillance of Nipah virus in Thailand. 泰国尼帕病毒二十年的一次卫生监测。
Pub Date : 2021-07-05 DOI: 10.1186/s42522-021-00044-9
Supaporn Wacharapluesadee, Siriporn Ghai, Prateep Duengkae, Pattarapol Manee-Orn, Weerapong Thanapongtharm, Abhinbhen W Saraya, Sangchai Yingsakmongkon, Yutthana Joyjinda, Sanipa Suradhat, Weenassarin Ampoot, Bundit Nuansrichay, Thongchai Kaewpom, Rachod Tantilertcharoen, Apaporn Rodpan, Kachen Wongsathapornchai, Teerada Ponpinit, Rome Buathong, Saowalak Bunprakob, Sudarat Damrongwatanapokin, Chanida Ruchiseesarod, Sininat Petcharat, Wantanee Kalpravidh, Kevin J Olival, Martha M Stokes, Thiravat Hemachudha

Background: Nipah virus (NiV) infection causes encephalitis and has > 75% mortality rate, making it a WHO priority pathogen due to its pandemic potential. There have been NiV outbreak(s) in Malaysia, India, Bangladesh, and southern Philippines. NiV naturally circulates among fruit bats of the genus Pteropus and has been detected widely across Southeast and South Asia. Both Malaysian and Bangladeshi NiV strains have been found in fruit bats in Thailand. This study summarizes 20 years of pre-emptive One Health surveillance of NiV in Thailand, including triangulated surveillance of bats, and humans and pigs in the vicinity of roosts inhabited by NiV-infected bats.

Methods: Samples were collected periodically and tested for NiV from bats, pigs and healthy human volunteers from Wat Luang village, Chonburi province, home to the biggest P. lylei roosts in Thailand, and other provinces since 2001. Archived cerebrospinal fluid specimens from encephalitis patients between 2001 and 2012 were also tested for NiV. NiV RNA was detected using nested reverse transcription polymerase chain reaction (RT-PCR). NiV antibodies were detected using enzyme-linked immunosorbent assay or multiplex microsphere immunoassay.

Results: NiV RNA (mainly Bangladesh strain) was detected every year in fruit bats by RT-PCR from 2002 to 2020. The whole genome sequence of NiV directly sequenced from bat urine in 2017 shared 99.17% identity to NiV from a Bangladeshi patient in 2004. No NiV-specific IgG antibodies or RNA have been found in healthy volunteers, encephalitis patients, or pigs to date. During the sample collection trips, 100 community members were trained on how to live safely with bats.

Conclusions: High identity shared between the NiV genome from Thai bats and the Bangladeshi patient highlights the outbreak potential of NiV in Thailand. Results from NiV cross-sectoral surveillance were conveyed to national authorities and villagers which led to preventive control measures, increased surveillance of pigs and humans in vicinity of known NiV-infected roosts, and increased vigilance and reduced risk behaviors at the community level. This proactive One Health approach to NiV surveillance is a success story; that increased collaboration between the human, animal, and wildlife sectors is imperative to staying ahead of a zoonotic disease outbreak.

背景:尼帕病毒(NiV)感染可引起脑炎,死亡率> 75%,由于其大流行的潜力,使其成为世卫组织优先考虑的病原体。在马来西亚、印度、孟加拉国和菲律宾南部都发生了新冠肺炎疫情。新冠病毒在狐蝠属的果蝠中自然传播,在东南亚和南亚广泛发现。在泰国的果蝠中发现了马来西亚和孟加拉国的NiV菌株。本研究总结了泰国20年来对新冠病毒的预防性One Health监测,包括对蝙蝠、感染新冠病毒的蝙蝠居住的栖息地附近的人和猪进行三角监测。方法:自2001年以来,定期从泰国最大的莱雷疟原虫栖息地春武里省Wat Luang村和其他省份的蝙蝠、猪和健康人类志愿者身上采集样本并检测NiV。还对2001年至2012年脑炎患者存档的脑脊液标本进行了NiV检测。采用巢式逆转录聚合酶链反应(RT-PCR)检测NiV RNA。采用酶联免疫吸附法或多重微球免疫分析法检测NiV抗体。结果:2002 - 2020年,RT-PCR每年在果蝠中检测到NiV RNA(主要为孟加拉国株)。2017年从蝙蝠尿液中直接测序的NiV全基因组序列与2004年孟加拉国患者的NiV同源性为99.17%。迄今为止,未在健康志愿者、脑炎患者或猪中发现niv特异性IgG抗体或RNA。在收集样本的过程中,100名社区成员接受了如何与蝙蝠安全生活的培训。结论:来自泰国蝙蝠和孟加拉国患者的新冠病毒基因组具有高度同一性,这凸显了新冠病毒在泰国爆发的潜力。将新冠病毒跨部门监测结果传达给国家当局和村民,从而采取预防控制措施,加强对已知新冠病毒感染栖息地附近的猪和人的监测,并在社区一级提高警惕并减少危险行为。这种积极主动的“同一个健康”监测方法是一个成功的故事;加强人类、动物和野生动物部门之间的合作对于预防人畜共患疾病暴发至关重要。
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引用次数: 7
Sero-molecular epidemiology of hepatitis E virus in pigs and human contacts in Ghana. 加纳猪和人类接触者戊型肝炎病毒的血清分子流行病学。
Pub Date : 2021-06-22 DOI: 10.1186/s42522-021-00043-w
Richmond Yeboah, Augustina Angelina Sylverken, Michael Owusu, Philip El-Duah, Vitus Burimuah, Yaw Frimpong, Jones Lamptey, Isabella Eckerle, Benjamin Meyer, Christopher Antwi, Olivia Agbenyaga, Raphael Folitse, Benjamin Emikpe, Samuel Kingsley Oppong, Yaw Adu-Sarkodie, Christian Drosten

Background: Hepatitis E virus (HEV) is among the leading causes of viral hepatitis in most developing countries. Zoonotic acquisition of HEV genotype 3 from swine has come into focus more recently. Available studies on HEV in Ghana and other countries in the region do not provide enough information towards understanding the epidemiology of HEV in human and animal populations. Towards this end, we conducted a comparative cross-sectional study to determine the seroprevalence and risk factors associated with HEV exposure, both in swine and humans working on pig farms in typical local settings. The presence of viral RNA in human and swine samples was also evaluated, along with classification of viral sequences from HEV-positive samples.

Methods: Structured questionnaires soliciting information on pigs reared, as well as socio-demographic information including age, sex and educational background of humans was collected. A total of 10 ml and 5 ml of whole blood was collected from pigs and human participants respectively. ELISA and real-time RT-PCR were performed on the sera for the qualitative detection of IgG antibodies to hepatitis E virus and viral RNA, respectively.

Results: Five hundred and forty-four (544) human participants including 264 swine contacts and 280 swine non-contacts were enrolled in the study. Although the proportion of HEV IgG antibodies was higher in contact groups (114; 54.3%) than non-contact groups (96; 45.7%), a multivariate analysis did not show any significant difference. No HEV RNA was detected in human samples. Similarly, 720 pigs were sampled from 18 farms located in five regions in Ghana. Twenty-three (23) of the pigs (3.2, 95%CI = 2.0-4.8) were positive for HEV RNA by real-time RT-PCR testing. Sequences obtained from HEV-positive samples were found to share high sequence identities with each other and clustered with other genotype 3 viruses indicating the existence of circulating zoonotic genotype 3 viruses on farms. Although we did not find evidence of pig to human transmission of HEV genotype 3, the presence of this genotype in pigs shows the potential for possible zoonotic transmission in African farm settings and buttresses the importance of active surveillance for the infection among at risk populations.

背景:戊型肝炎病毒(HEV)是大多数发展中国家病毒性肝炎的主要病因之一。最近,从猪身上获得HEV基因3型的人畜共患性感染成为关注的焦点。目前在加纳和该地区其他国家进行的关于HEV的研究没有提供足够的信息,有助于了解HEV在人类和动物群体中的流行病学。为此,我们进行了一项比较横断面研究,以确定在典型的当地环境中猪场工作的猪和人的血清患病率和与HEV暴露相关的危险因素。还对人类和猪样本中病毒RNA的存在进行了评估,并对hev阳性样本中的病毒序列进行了分类。方法:采用结构化问卷调查方法,收集猪的饲养情况,以及人的年龄、性别、文化程度等社会人口学信息。从猪和人身上分别采集了10毫升和5毫升全血。ELISA和real-time RT-PCR分别定性检测血清中戊型肝炎病毒IgG抗体和病毒RNA。结果:544人(544人)被纳入研究,包括264名猪接触者和280名猪非接触者。虽然接触组中HEV IgG抗体比例较高(114;54.3%)高于非接触组(96;45.7%),多因素分析无显著差异。人标本未检出HEV RNA。同样,从加纳5个地区的18个农场取样720头猪。实时RT-PCR检测23头猪(3.2头,95%CI = 2.0 ~ 4.8) HEV RNA阳性。从hev阳性样本中获得的序列发现彼此具有很高的序列一致性,并与其他基因3型病毒聚集,表明农场中存在流行的人畜共患基因3型病毒。虽然我们没有发现HEV基因3型猪向人传播的证据,但该基因型在猪身上的存在表明,在非洲农场环境中可能存在人畜共患传播,并支持在危险人群中对感染进行主动监测的重要性。
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引用次数: 1
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