Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20220621070609
Perinçek Seçkinozan Şeker
For contributing to a better understanding of the phylogenetic position and evolutionary history of Turkish roe deer, mitochondrial DNA sequence data belonging to a population from Artvin, Turkey were introduced by this study. The cytochrome b (cyt b ) and cytochrome c oxidase subunit I (COI) genes of mitochondrial DNA belonging to the four samples of Capreolus capreolus were partially sequenced and analyzed alongside the sequences obtained from GenBank. The cyt b and COI data sets included sequences that were 1059 and 646 bp long, respectively. The Turkish roe deer population in Artvin had a relatively low nucleotide diversity and high haplotype diversity. A total of two haplotypes were identified for cyt b , while three haplotypes were identified for COI. Of the haplotypes detected, two cyt b and two COI haplotypes were specific to Turkey. Molecular phylogenetic analyses; Maximum Likelihood (ML), Bayesian Inference (BI), and Network revealed topologies and evolutionary networks which were not definitely resolved. Consequently, Turkish roe deer haplotypes were intertwined with the roe deer haplotypes from Central Europe instead of forming an independent evolutionary clade, and were also, found genetically close to Central European haplotypes. According to the evolutionary dating analysis, the divergence of C. capreolus populations in Europe started at the beginning of the Pleistocene (approximately 2.72 mya). This analysis also demonstrated that the divergence of Turkish roe deer began at approximately 0.58 mya. Given the existence of, shared haplotypes, the relative positions of Turkish roe deer haplotypes in the topologies of the ML and BI phylogenetic trees and evolutionary networks, and the times of evolutionary divergence events within this species; the following results may be inferred: (1) roe deer individuals with the same genotype as those in Europe can also be found in areas further east, such as Turkey; (2) these could be considered to be representatives, which may have contributed to the formation and shaping processes of the known admixed genetic structure of European roe deer populations in Europe; and finally, (3) the roe deer populations may have probably entered Turkey from Europe when evolutionary divergence times based on BI analysis are considered.
{"title":"Insight into the Phylogenetic Position of Capreolus capreolus, the European Roe Deer, (Mammalia: Cervidae) from Turkey using Mitochondrial Genes","authors":"Perinçek Seçkinozan Şeker","doi":"10.17582/journal.pjz/20220621070609","DOIUrl":"https://doi.org/10.17582/journal.pjz/20220621070609","url":null,"abstract":"For contributing to a better understanding of the phylogenetic position and evolutionary history of Turkish roe deer, mitochondrial DNA sequence data belonging to a population from Artvin, Turkey were introduced by this study. The cytochrome b (cyt b ) and cytochrome c oxidase subunit I (COI) genes of mitochondrial DNA belonging to the four samples of Capreolus capreolus were partially sequenced and analyzed alongside the sequences obtained from GenBank. The cyt b and COI data sets included sequences that were 1059 and 646 bp long, respectively. The Turkish roe deer population in Artvin had a relatively low nucleotide diversity and high haplotype diversity. A total of two haplotypes were identified for cyt b , while three haplotypes were identified for COI. Of the haplotypes detected, two cyt b and two COI haplotypes were specific to Turkey. Molecular phylogenetic analyses; Maximum Likelihood (ML), Bayesian Inference (BI), and Network revealed topologies and evolutionary networks which were not definitely resolved. Consequently, Turkish roe deer haplotypes were intertwined with the roe deer haplotypes from Central Europe instead of forming an independent evolutionary clade, and were also, found genetically close to Central European haplotypes. According to the evolutionary dating analysis, the divergence of C. capreolus populations in Europe started at the beginning of the Pleistocene (approximately 2.72 mya). This analysis also demonstrated that the divergence of Turkish roe deer began at approximately 0.58 mya. Given the existence of, shared haplotypes, the relative positions of Turkish roe deer haplotypes in the topologies of the ML and BI phylogenetic trees and evolutionary networks, and the times of evolutionary divergence events within this species; the following results may be inferred: (1) roe deer individuals with the same genotype as those in Europe can also be found in areas further east, such as Turkey; (2) these could be considered to be representatives, which may have contributed to the formation and shaping processes of the known admixed genetic structure of European roe deer populations in Europe; and finally, (3) the roe deer populations may have probably entered Turkey from Europe when evolutionary divergence times based on BI analysis are considered.","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67562527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20220701070727
Qurat-ul-Ain Ijaz
Qurat-ul-Ain Ijaz1, Amna Sulaman1, Dost Muhammad Baloch2, Muhammad Shafi2, Faiz Muhammad1* and Shahnaz Rashid1 1Center of Excellence in Marine Biology, University of Karachi, Karachi-75270, Pakistan 2Lasbella University of Agriculture, Water and Marine Sciences, Lasbella, Uthal Article Information Received 01 July 2022 Revised 15 August 2022 Accepted 14 September 2022 Available online 27 April 2023 (early access)
Qurat-ul-Ain Ijaz1, Amna Sulaman1, Dost Muhammad Baloch2, Muhammad Shafi2, Faiz Muhammad1*和Shahnaz Rashid1 1巴基斯坦卡拉奇-75270卡拉奇大学海洋生物学卓越中心2拉斯贝拉农业，水和海洋科学大学，拉斯贝拉，乌萨塔文章信息接收日期2022年7月1日修订2022年8月15日接受2022年9月14日2023年4月27日在线(提前获取)
{"title":"Identification of Nine Gastropod Species with Three New Records using Cytochrome Oxidase Sub-Unit 1 Marker","authors":"Qurat-ul-Ain Ijaz","doi":"10.17582/journal.pjz/20220701070727","DOIUrl":"https://doi.org/10.17582/journal.pjz/20220701070727","url":null,"abstract":"Qurat-ul-Ain Ijaz1, Amna Sulaman1, Dost Muhammad Baloch2, Muhammad Shafi2, Faiz Muhammad1* and Shahnaz Rashid1 1Center of Excellence in Marine Biology, University of Karachi, Karachi-75270, Pakistan 2Lasbella University of Agriculture, Water and Marine Sciences, Lasbella, Uthal Article Information Received 01 July 2022 Revised 15 August 2022 Accepted 14 September 2022 Available online 27 April 2023 (early access)","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67563212","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20220928070901
Hyun-Su Hwang
1Team of Specific Protected Area Research, National Institute of Ecology, Seocheon 33657, South Korea 2School of Bioresource and Bioscience, Chung-Ang University, Ansung, South Korea 3Animal Resources Division, National Institute of Biological Resources, Incheon 22689, South Korea. Article Information Received 28 September 2022 Revised 19 October 2022 Accepted 09 November 2022 Available online10 January 2023 (early access)
{"title":"Effect of Nutritional Content on Artificially Supplied Seed Utilization of Wintering Birds in a Mixed Forest, South Korea","authors":"Hyun-Su Hwang","doi":"10.17582/journal.pjz/20220928070901","DOIUrl":"https://doi.org/10.17582/journal.pjz/20220928070901","url":null,"abstract":"1Team of Specific Protected Area Research, National Institute of Ecology, Seocheon 33657, South Korea 2School of Bioresource and Bioscience, Chung-Ang University, Ansung, South Korea 3Animal Resources Division, National Institute of Biological Resources, Incheon 22689, South Korea. Article Information Received 28 September 2022 Revised 19 October 2022 Accepted 09 November 2022 Available online10 January 2023 (early access)","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67567553","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20221011021005
Cheng-Hong Chen
.
．
{"title":"The Value of Procalcitonin Combined with C-Reactive Protein Assay in the Early Clinical Diagnosis of Bloodstream Infection","authors":"Cheng-Hong Chen","doi":"10.17582/journal.pjz/20221011021005","DOIUrl":"https://doi.org/10.17582/journal.pjz/20221011021005","url":null,"abstract":".","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67567828","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20220930120931
S. Abbas
Bovine coronavirus (BCoV) is a major viral pathogen linked to respiratory and enteric problems in newborn calves. The goal of this study is to look into the molecular occurrence, haemato-biochemical changes, and risk factors associated with the occurrence of BCoV infection in cattle calves at different dairy farms and small households in the district of Jhelum, Pakistan. From July 2020 to June 2021, 200 faecal samples were collected from newborn cattle calves exhibiting symptoms of diarrhoea and dysentery. S&C Biotech Bovine Coronavirus Antigen Rapid Test Kits were used to screen samples, which were then subjected to RT-PCR for molecular characterization. For the haemato-biochemical analysis, blood was taken from calves infected with BCoV. A questionnaire was used to collect information about the risk factors associated with the occurrence of BCoV infection. BCoV infection was found in 3.5% (7/200) of calves using diagnostic screening kits and 3.0% (6/200) of calves using RT-PCR. Breed, age, sex, vomiting, previous history of diarrhoea, body conditions, food type, colostrum feeding, deworming history, living environment, seasonal variation, and cohabitation with other animals were all assumed risk factors for BCoV infection ( p< 0.05). There was a significant ( p< 0.001) decrease in MCV (fl) and a significant ( p< 0.006) increase in TLC (1x10 3 /cm 3 ) on haematological analysis in BCoV-infected calves. TEC (1x10 6 /cm 3 ), WBC (1x10 6 /cm 3 ), RBC (1x10 6 /cm 3 ), and Hct% were significantly ( p< 0.05) higher. Similarly, infected calves had a non-significant ( p< 0.090) increase in K (mEq/L) and a significant ( p< 0.000) decrease in Na (mEq/L), Ca (mmol/L), Cu (mol/L), and Fe (mol/L) on biochemical analysis. It was concluded that the occurrence of BCoV infection was predisposed by assumed risk factors, and haemato-biochemical alterations were observed in BCoV infected calves.
{"title":"Haemato-biochemical Changes and Various Risk Factors Associated with Bovine Coronavirus Infection in Cattle Calves","authors":"S. Abbas","doi":"10.17582/journal.pjz/20220930120931","DOIUrl":"https://doi.org/10.17582/journal.pjz/20220930120931","url":null,"abstract":"Bovine coronavirus (BCoV) is a major viral pathogen linked to respiratory and enteric problems in newborn calves. The goal of this study is to look into the molecular occurrence, haemato-biochemical changes, and risk factors associated with the occurrence of BCoV infection in cattle calves at different dairy farms and small households in the district of Jhelum, Pakistan. From July 2020 to June 2021, 200 faecal samples were collected from newborn cattle calves exhibiting symptoms of diarrhoea and dysentery. S&C Biotech Bovine Coronavirus Antigen Rapid Test Kits were used to screen samples, which were then subjected to RT-PCR for molecular characterization. For the haemato-biochemical analysis, blood was taken from calves infected with BCoV. A questionnaire was used to collect information about the risk factors associated with the occurrence of BCoV infection. BCoV infection was found in 3.5% (7/200) of calves using diagnostic screening kits and 3.0% (6/200) of calves using RT-PCR. Breed, age, sex, vomiting, previous history of diarrhoea, body conditions, food type, colostrum feeding, deworming history, living environment, seasonal variation, and cohabitation with other animals were all assumed risk factors for BCoV infection ( p< 0.05). There was a significant ( p< 0.001) decrease in MCV (fl) and a significant ( p< 0.006) increase in TLC (1x10 3 /cm 3 ) on haematological analysis in BCoV-infected calves. TEC (1x10 6 /cm 3 ), WBC (1x10 6 /cm 3 ), RBC (1x10 6 /cm 3 ), and Hct% were significantly ( p< 0.05) higher. Similarly, infected calves had a non-significant ( p< 0.090) increase in K (mEq/L) and a significant ( p< 0.000) decrease in Na (mEq/L), Ca (mmol/L), Cu (mol/L), and Fe (mol/L) on biochemical analysis. It was concluded that the occurrence of BCoV infection was predisposed by assumed risk factors, and haemato-biochemical alterations were observed in BCoV infected calves.","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"32 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67568168","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20221013091007
Wenfang Lou
1Department of Pharmaceutical and Life Sciences, Jiujiang University, Jiujiang, China 2College of Animal Science and Technology, Jiangxi Agriculture University, Jiangxi Province Key Laboratory of Animal Nutrition, Engineering Research Center of Nutritional Feed Development, Nanchang, China 3College of Animal Science, Anhui Science and Technology University, Fengyang, China 4College of Veterinary Sciences, The University of Agriculture, Peshawar, Pakistan
{"title":"Ameliorative Effect of Dietary Glutamine on Antioxidant Capacity of Broiler Chicks During Starter Phase Under Cold Stress","authors":"Wenfang Lou","doi":"10.17582/journal.pjz/20221013091007","DOIUrl":"https://doi.org/10.17582/journal.pjz/20221013091007","url":null,"abstract":"1Department of Pharmaceutical and Life Sciences, Jiujiang University, Jiujiang, China 2College of Animal Science and Technology, Jiangxi Agriculture University, Jiangxi Province Key Laboratory of Animal Nutrition, Engineering Research Center of Nutritional Feed Development, Nanchang, China 3College of Animal Science, Anhui Science and Technology University, Fengyang, China 4College of Veterinary Sciences, The University of Agriculture, Peshawar, Pakistan","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67568378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20221013061003
Aatif Ahmad Khan
{"title":"Population Data and Internal Validation of the 21 Short Tandem Repeat Loci in Turkish Population","authors":"Aatif Ahmad Khan","doi":"10.17582/journal.pjz/20221013061003","DOIUrl":"https://doi.org/10.17582/journal.pjz/20221013061003","url":null,"abstract":"","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67568707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20221031021052
Xinyue Wang
Influenced by water pollution and flow
受水污染和水流影响
{"title":"Age and Growth of Triplophysa (Hedinichthys) yarkandensis (Day, 1877) in the Tarim River in Xinjiang, China","authors":"Xinyue Wang","doi":"10.17582/journal.pjz/20221031021052","DOIUrl":"https://doi.org/10.17582/journal.pjz/20221031021052","url":null,"abstract":"Influenced by water pollution and flow","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67569644","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20221101011143
Jinlong Cheng
{"title":"Effect of Supplementation of Short-Fatty Acid on PER2 and Genes Related to Volatile Fatty Acid in Isolated Goat Ruminal Epithelial Tissue","authors":"Jinlong Cheng","doi":"10.17582/journal.pjz/20221101011143","DOIUrl":"https://doi.org/10.17582/journal.pjz/20221101011143","url":null,"abstract":"","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67570121","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.17582/journal.pjz/20221110081129
Phuong-Thao Ho
1Laboratory of Ecology and Environmental Management, Science and Technology Advanced Institute, Van Lang University, Ho Chi Minh City, Vietnam 2Faculty of Applied Technology, School of Engineering and Technology, Van Lang University, Ho Chi Minh City, Vietnam 3Faculty of Chemistry-Biology-Environment, Pham Van Dong University, Quang Ngai City, 49000, Vietnam 4Biology Department, Hue University of Education, Hue University, 49000, Vietnam Article Information Received 10 November 2022 Revised 22 December 2022 Accepted 24 January 2023 Available online 22 May 2023 (early access)
{"title":"Morphological Description and Weight-Length Relationship of the Intertidal Sipuncula Siphonosoma australe (Keferstein, 1865) along the Central Coast of Vietnam","authors":"Phuong-Thao Ho","doi":"10.17582/journal.pjz/20221110081129","DOIUrl":"https://doi.org/10.17582/journal.pjz/20221110081129","url":null,"abstract":"1Laboratory of Ecology and Environmental Management, Science and Technology Advanced Institute, Van Lang University, Ho Chi Minh City, Vietnam 2Faculty of Applied Technology, School of Engineering and Technology, Van Lang University, Ho Chi Minh City, Vietnam 3Faculty of Chemistry-Biology-Environment, Pham Van Dong University, Quang Ngai City, 49000, Vietnam 4Biology Department, Hue University of Education, Hue University, 49000, Vietnam Article Information Received 10 November 2022 Revised 22 December 2022 Accepted 24 January 2023 Available online 22 May 2023 (early access)","PeriodicalId":19975,"journal":{"name":"Pakistan Journal of Zoology","volume":"1 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67570125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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