Pub Date : 2022-09-13DOI: 10.1080/1343943X.2022.2120506
N. Vu, T. Dinh, A. Tran, T. Le, T. Vu, Thi-Thu-Thuy Nguyen, Tuan-Anh Pham, Ngoc-Lan Vu, Shimotani Koji, Shugo Hama, I. Kim, D. Jang, Dea-Hoon Kim
ABSTRACT The use of eggshells as an alternative source of calcium carbonate for groundnut can reduce the impact on the natural reserves of limestone, a non-renewable natural source. This study aimed to investigate the effects of eggshell powder application on the growth and yield of groundnut. The calcium treatments were lime application (A0) at 500 kg ha−1 and four rates of eggshell powder application including A1 (200 kg ha−1), A2 (300 kg ha−1), A3 (400 kg ha−1), and A4 (500 kg ha−1). Two application times, T1 (applying 5-days before sowing) and T2 (applying 5-days after flowering) were employed. The result showed that eggshell powder could be a useful alternative source to supply Ca for groundnut. Application of eggshell powder before sowing resulted in significantly higher pod yield and total calcium uptake with better growth parameters than after flowering. Increasing eggshell powder application rates also increased soil pH and calcium contents, and plant calcium uptake. The application rate of eggshell powder before sowing at the rate of 300 kg ha−1 produced the highest pod yield and was suggested to be optimum. Graphical Abstract
摘要使用蛋壳作为花生碳酸钙的替代来源，可以减少对石灰石自然储量的影响，石灰石是一种不可再生的自然资源。本研究旨在研究蛋壳粉对花生生长和产量的影响。钙处理是以500 kg ha−1施用石灰（A0）和四种蛋壳粉施用率，包括A1（200 kg ha−2）、A2（300 kg ha−3）、A3（400 kg ha−4）和A4（500 kg ha–1）。采用两次施用时间，T1（播种前施用5天）和T2（开花后施用5天后）。结果表明，蛋壳粉可作为花生钙的有效替代来源。播种前施用蛋壳粉可显著提高豆荚产量和总钙吸收量，且生长参数优于开花后。蛋壳粉施用量的增加也增加了土壤pH值和钙含量，并增加了植物对钙的吸收。蛋壳粉在播种前的施用量为300kg ha−1，产荚量最高，并被认为是最佳的。图形摘要
{"title":"Eggshell powder as calcium source on growth and yield of groundnut (Arachis hypogaea L.)","authors":"N. Vu, T. Dinh, A. Tran, T. Le, T. Vu, Thi-Thu-Thuy Nguyen, Tuan-Anh Pham, Ngoc-Lan Vu, Shimotani Koji, Shugo Hama, I. Kim, D. Jang, Dea-Hoon Kim","doi":"10.1080/1343943X.2022.2120506","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2120506","url":null,"abstract":"ABSTRACT The use of eggshells as an alternative source of calcium carbonate for groundnut can reduce the impact on the natural reserves of limestone, a non-renewable natural source. This study aimed to investigate the effects of eggshell powder application on the growth and yield of groundnut. The calcium treatments were lime application (A0) at 500 kg ha−1 and four rates of eggshell powder application including A1 (200 kg ha−1), A2 (300 kg ha−1), A3 (400 kg ha−1), and A4 (500 kg ha−1). Two application times, T1 (applying 5-days before sowing) and T2 (applying 5-days after flowering) were employed. The result showed that eggshell powder could be a useful alternative source to supply Ca for groundnut. Application of eggshell powder before sowing resulted in significantly higher pod yield and total calcium uptake with better growth parameters than after flowering. Increasing eggshell powder application rates also increased soil pH and calcium contents, and plant calcium uptake. The application rate of eggshell powder before sowing at the rate of 300 kg ha−1 produced the highest pod yield and was suggested to be optimum. Graphical Abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"413 - 420"},"PeriodicalIF":2.5,"publicationDate":"2022-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42047312","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-07-03DOI: 10.1080/1343943X.2022.2097098
H. Takaragawa, Ken Okamoto, Y. Terajima, T. Anzai
ABSTRACT Nitrate-nitrogen leaching from farmland has adverse effects on drinking water and environmental conservation in tropical and subtropical island regions such as the Southwest Islands of Japan. Sugarcane is widely grown in these areas, and it is necessary to increase the nitrogen use efficiency of this crop to reduce nitrogen leaching. Studies on nitrogen utilization in this species have focused on yield potential and fertilizer management; however, there have been only a few breeding attempts. The relationship between root system characteristics and nitrogen utilization is also unclear, while improvement of nitrogen utilization using Erianthus can be expected because of its unique root system characteristics. In the present study, nitrogen leaching and root system characteristics of sugarcane × Erianthus intergeneric hybrid and parental genotypes were investigated using a lysimeter to verify the possibility of improving nitrogen utilization characteristics. Nitrogen leaching was significantly lower under the parental Erianthus from the early growth stage, while it was significantly lower in the intergeneric hybrid in the mid-growth stage than that in the parental sugarcane. The nitrogen use efficiencies of Erianthus and the intergeneric hybrid were significantly greater than that of sugarcane. Erianthus and the intergeneric hybrid exhibited lower shoot/root ratio and deeper rooting than sugarcane and consumed significant amounts of soil moisture in the deeper layers, suggesting that root mass and deeper rooting may be factors in reducing nitrogen leaching. These results indicate the possibility of improving the nitrogen utilization characteristics of sugarcane by improving its root system characteristics using Erianthus. GRAPHICAL ABSTRACT
{"title":"Evaluation of root distribution and nitrate leaching in sugarcane, Erianthus, and their intergeneric hybrid at new planting","authors":"H. Takaragawa, Ken Okamoto, Y. Terajima, T. Anzai","doi":"10.1080/1343943X.2022.2097098","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2097098","url":null,"abstract":"ABSTRACT Nitrate-nitrogen leaching from farmland has adverse effects on drinking water and environmental conservation in tropical and subtropical island regions such as the Southwest Islands of Japan. Sugarcane is widely grown in these areas, and it is necessary to increase the nitrogen use efficiency of this crop to reduce nitrogen leaching. Studies on nitrogen utilization in this species have focused on yield potential and fertilizer management; however, there have been only a few breeding attempts. The relationship between root system characteristics and nitrogen utilization is also unclear, while improvement of nitrogen utilization using Erianthus can be expected because of its unique root system characteristics. In the present study, nitrogen leaching and root system characteristics of sugarcane × Erianthus intergeneric hybrid and parental genotypes were investigated using a lysimeter to verify the possibility of improving nitrogen utilization characteristics. Nitrogen leaching was significantly lower under the parental Erianthus from the early growth stage, while it was significantly lower in the intergeneric hybrid in the mid-growth stage than that in the parental sugarcane. The nitrogen use efficiencies of Erianthus and the intergeneric hybrid were significantly greater than that of sugarcane. Erianthus and the intergeneric hybrid exhibited lower shoot/root ratio and deeper rooting than sugarcane and consumed significant amounts of soil moisture in the deeper layers, suggesting that root mass and deeper rooting may be factors in reducing nitrogen leaching. These results indicate the possibility of improving the nitrogen utilization characteristics of sugarcane by improving its root system characteristics using Erianthus. GRAPHICAL ABSTRACT","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"298 - 310"},"PeriodicalIF":2.5,"publicationDate":"2022-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45669555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-07-03DOI: 10.1080/1343943X.2022.2077223
M. Saleem, Huiqun Zhu, Lijun Liu
ABSTRACT Ramie (Boehmeria nivea L.) is China’s unique environmentally friendly cash crop. To protect the environment more strictly and develop sustainably, the planting process will reduce the input of fertilizer (nitrogen fertilizer). The effect of reduced nitrogen fertilizer on the yield and quality of ramie is still under systematic investigation. Taking the fiber variety ‘H5’ as the target, 4 N application rates of 100% (N 390 kg/hm2), 85%, 70%, and 55% were set, with no N application as the control (marked as N100, N85, N70, N55, and CK), to study the effects of N reduction on ramie yield, N uptake and utilization, and soil fertility. The results showed that the total production of ramie first harvest raw fiber and nitrogen accumulation showed a trend of first rising and then falling with the decrease of nitrogen application, the output of secondary and tertiary harvest ramie decreased with the reduction of nitrogen application, and the total production of N85 treatment was the highest. Compared with N100, N70 and N85 can improve n utilization, N agronomic utilization, N partial productivity, and N harvest index. Nitrogen reduction can reduce the content of soil organic matter, available phosphorus, and available potassium in ramie, and the difference between N85 and N100 is not significant. Nitrogen fertilizer application can be reduced by 15% in ramie production. Graphical abstract
{"title":"Synergistic and sustainable impact of reducing nitrogen fertilizer on growth, yield, and quality of ramie (Boehmeria nivea L.)","authors":"M. Saleem, Huiqun Zhu, Lijun Liu","doi":"10.1080/1343943X.2022.2077223","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2077223","url":null,"abstract":"ABSTRACT Ramie (Boehmeria nivea L.) is China’s unique environmentally friendly cash crop. To protect the environment more strictly and develop sustainably, the planting process will reduce the input of fertilizer (nitrogen fertilizer). The effect of reduced nitrogen fertilizer on the yield and quality of ramie is still under systematic investigation. Taking the fiber variety ‘H5’ as the target, 4 N application rates of 100% (N 390 kg/hm2), 85%, 70%, and 55% were set, with no N application as the control (marked as N100, N85, N70, N55, and CK), to study the effects of N reduction on ramie yield, N uptake and utilization, and soil fertility. The results showed that the total production of ramie first harvest raw fiber and nitrogen accumulation showed a trend of first rising and then falling with the decrease of nitrogen application, the output of secondary and tertiary harvest ramie decreased with the reduction of nitrogen application, and the total production of N85 treatment was the highest. Compared with N100, N70 and N85 can improve n utilization, N agronomic utilization, N partial productivity, and N harvest index. Nitrogen reduction can reduce the content of soil organic matter, available phosphorus, and available potassium in ramie, and the difference between N85 and N100 is not significant. Nitrogen fertilizer application can be reduced by 15% in ramie production. Graphical abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"289 - 297"},"PeriodicalIF":2.5,"publicationDate":"2022-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48400539","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-07-03DOI: 10.1080/1343943X.2022.2103003
Rintaro Kondo, Yu Tanaka, T. Shiraiwa
ABSTRACT Canopy photosynthesis is an important component of biomass production in field-grown rice (Oryza sativa L.). Although canopy temperature differences (CTD) provide important information for evaluating canopy photosynthesis, the measurement of CTD is still a labor-intensive task. Therefore, we designed this study to establish a model for predicting CTD under different field conditions using meteorological data and evaluated the environmental response of CTD using the established model. Our study collected 2,056,264 CTD data points from two rice cultivars having different photosynthetic capacities, ‘Koshihikari’ and ‘Takanari’, and then used these data to create a novel model using a neural network (NN). The input variables were limited to meteorological data, and the output variable was set to CTD. The established NN model produced a prediction accuracy of R2 = 0.792 and RMSE = 0.605°C. We then used this NN model to simulate the CTD response of the Koshihikari and Takanari cultivars in response to various environmental changes. These predictions revealed that Takanari had a lower CTD than Koshihikari when exposed to high relative humidity (RH) or low to moderate solar radiation (Rs ). In contrast, the CTD of Koshihikari tended to be lower than that of Takanari under lower RH or higher Rs . This result implies that the advantages of the single-leaf gas exchange system in Takanari can be mitigated under extremely high-VPD conditions. Thus, our new method may provide a powerful tool to gain a better understanding of gas exchange, growth processes, and varietal differences in rice cultivated under field conditions. Graphical Abstract
{"title":"Predicting rice (Oryza sativa L.) canopy temperature difference and estimating its environmental response in two rice cultivars, ‘Koshihikari’ and ‘Takanari’, based on a neural network","authors":"Rintaro Kondo, Yu Tanaka, T. Shiraiwa","doi":"10.1080/1343943X.2022.2103003","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2103003","url":null,"abstract":"ABSTRACT Canopy photosynthesis is an important component of biomass production in field-grown rice (Oryza sativa L.). Although canopy temperature differences (CTD) provide important information for evaluating canopy photosynthesis, the measurement of CTD is still a labor-intensive task. Therefore, we designed this study to establish a model for predicting CTD under different field conditions using meteorological data and evaluated the environmental response of CTD using the established model. Our study collected 2,056,264 CTD data points from two rice cultivars having different photosynthetic capacities, ‘Koshihikari’ and ‘Takanari’, and then used these data to create a novel model using a neural network (NN). The input variables were limited to meteorological data, and the output variable was set to CTD. The established NN model produced a prediction accuracy of R2 = 0.792 and RMSE = 0.605°C. We then used this NN model to simulate the CTD response of the Koshihikari and Takanari cultivars in response to various environmental changes. These predictions revealed that Takanari had a lower CTD than Koshihikari when exposed to high relative humidity (RH) or low to moderate solar radiation (Rs ). In contrast, the CTD of Koshihikari tended to be lower than that of Takanari under lower RH or higher Rs . This result implies that the advantages of the single-leaf gas exchange system in Takanari can be mitigated under extremely high-VPD conditions. Thus, our new method may provide a powerful tool to gain a better understanding of gas exchange, growth processes, and varietal differences in rice cultivated under field conditions. Graphical Abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"394 - 406"},"PeriodicalIF":2.5,"publicationDate":"2022-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48384924","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-06-20DOI: 10.1080/1343943X.2022.2090392
S. Agarie, M. Tada, Masako Kimura, Hitoshi Suzuki, M. Morokuma, M. Toyota, I. Nakamura
ABSTRACT Halophytes are salt-tolerant plant that grows naturally in saline areas where almost all conventional crops die due to NaCl toxicity. The common ice plant, Mesembryanthemum crystallinum L., an annual halophyte native to South Africa, tolerates high salinity levels and accumulates NaCl in a shoot at a high level. To check the availability of the ice plant for desalinization of soils, we cultured the ice plant in soils collected from 16 sites located along coastal regions in the prefectures of Miyagi and Iwate, where were attacked by the tsunami disaster in the wake of the 2011 earthquake off the Pacific coast of Tohoku on 11 March 2011. In the soils obtained from some tsunami affected areas, the growth was better than that in the non-contaminated soil. The factors associated with growth inhibition were suggested to be water ratio (an index of water content) and soil water permeability. The ice plant’s estimated biological yield ranged from 0.33 to 14.6 kg m−2, equivalent to 2.3 to 101.7 t ha−1. The sum of Na+ and Cl− was about 9.5 g in the shoot (31.8% on a dry weight basis), and the estimated total amount of these ions removed from salinized soil was 2.38 t ha−1. These results indicated that the common ice plant could be used as a crop under salinity and a tool for ameliorating NaCl from salinized soils. Graphical Abstract
盐生植物是一种耐盐植物，自然生长在盐碱地，在盐碱地，几乎所有传统作物都因盐中毒而死亡。常见的冰植物，Mesembryanthemum crystinum L.，一种原产于南非的一年生盐生植物，耐高盐度并在茎部积累高水平的NaCl。为了检查冰植物对土壤脱盐的有效性，我们在宫城县和岩手县沿海地区的16个地点收集的土壤中培养了冰植物，这两个地区在2011年3月11日日本东北太平洋沿岸发生地震后遭受了海啸的袭击。在海啸灾区的土壤中，生长情况比未受污染的土壤好。与生长抑制有关的因子是水分比(水分含量指标)和土壤透水性。冰厂的估计生物产量范围为0.33至14.6 kg m - 2，相当于2.3至101.7 t ha - 1。茎部Na+和Cl−的总量约为9.5 g(占干重的31.8%)，盐渍化土壤中Na+和Cl−的总量估计为2.38 t ha−1。这些结果表明，普通冰植物可以作为盐胁迫下的作物，也可以作为盐渍化土壤改良NaCl的工具。图形抽象
{"title":"Growth and salt accumulation capacity of the common ice plant in the tsunami-affected soil","authors":"S. Agarie, M. Tada, Masako Kimura, Hitoshi Suzuki, M. Morokuma, M. Toyota, I. Nakamura","doi":"10.1080/1343943X.2022.2090392","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2090392","url":null,"abstract":"ABSTRACT Halophytes are salt-tolerant plant that grows naturally in saline areas where almost all conventional crops die due to NaCl toxicity. The common ice plant, Mesembryanthemum crystallinum L., an annual halophyte native to South Africa, tolerates high salinity levels and accumulates NaCl in a shoot at a high level. To check the availability of the ice plant for desalinization of soils, we cultured the ice plant in soils collected from 16 sites located along coastal regions in the prefectures of Miyagi and Iwate, where were attacked by the tsunami disaster in the wake of the 2011 earthquake off the Pacific coast of Tohoku on 11 March 2011. In the soils obtained from some tsunami affected areas, the growth was better than that in the non-contaminated soil. The factors associated with growth inhibition were suggested to be water ratio (an index of water content) and soil water permeability. The ice plant’s estimated biological yield ranged from 0.33 to 14.6 kg m−2, equivalent to 2.3 to 101.7 t ha−1. The sum of Na+ and Cl− was about 9.5 g in the shoot (31.8% on a dry weight basis), and the estimated total amount of these ions removed from salinized soil was 2.38 t ha−1. These results indicated that the common ice plant could be used as a crop under salinity and a tool for ameliorating NaCl from salinized soils. Graphical Abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"384 - 393"},"PeriodicalIF":2.5,"publicationDate":"2022-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44119711","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-06-20DOI: 10.1080/1343943X.2022.2090393
T. Sakaigaichi, Keisuke Suematsu, Y. Terajima, A. Kobâyashi, Yukari Kawata, Y. Kai
ABSTRACT Direct planting (i.e. the planting of seed roots) in sweet potato results in the formation of two root types – ‘mother’ and ‘daughter’ roots. High and stable daughter root yields are necessary to improve the acceptance of direct planting cultivation because mother roots have no commercial value. To establish a basis for the effective breeding, the root traits of 28 sweet potato genotypes cultivated by direct planting were evaluated for mother root weight, daughter root weight (DRW), total root weight (TRW), ratio of DRW to TRW (RDRW), and ratio of mother root enlargement. Significant differences between the genotypes were observed for all five traits (p < 0.01). However, we concluded that RDRW is a reliable indicator for performance under direct planting cultivation because it showed the highest estimated heritability (0.57), and genotypes with high RDRW also indicated notably low values for coefficient of variation. Graphical abstract
{"title":"Evaluation of mother and daughter root traits in sweet potato germplasm cultivated by direct planting","authors":"T. Sakaigaichi, Keisuke Suematsu, Y. Terajima, A. Kobâyashi, Yukari Kawata, Y. Kai","doi":"10.1080/1343943X.2022.2090393","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2090393","url":null,"abstract":"ABSTRACT Direct planting (i.e. the planting of seed roots) in sweet potato results in the formation of two root types – ‘mother’ and ‘daughter’ roots. High and stable daughter root yields are necessary to improve the acceptance of direct planting cultivation because mother roots have no commercial value. To establish a basis for the effective breeding, the root traits of 28 sweet potato genotypes cultivated by direct planting were evaluated for mother root weight, daughter root weight (DRW), total root weight (TRW), ratio of DRW to TRW (RDRW), and ratio of mother root enlargement. Significant differences between the genotypes were observed for all five traits (p < 0.01). However, we concluded that RDRW is a reliable indicator for performance under direct planting cultivation because it showed the highest estimated heritability (0.57), and genotypes with high RDRW also indicated notably low values for coefficient of variation. Graphical abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"407 - 412"},"PeriodicalIF":2.5,"publicationDate":"2022-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43413157","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-06-17DOI: 10.1080/1343943X.2022.2085588
Hanh thi Nguyen, A. Kamoshita, Poornima Ramalingam, Phoura Y
ABSTRACT The genetic basis for root vascular traits in rice, despite its direct impacts on root axial and radial hydraulic conductivity, has not been widely studied compared with deep rooting traits. We used five phenotyping datasets (i.e. from maturity stage grown in upland field in 2013, and from vegetative and maturity stages grown in upland and lowland fields in 2019) to quantify the genotypic variations and genomic regions of root vascular traits in a temperate japonica mapping population (from lowland Otomemochi (OTM) and upland Yumenohatamochi (YHM)). YHM had larger stele transversal area (STA) and total late metaxylem area (LMXA), as well as higher deep root ratio and total root length at deeper layers (>30 cm) than OTM. Root vascular traits were significantly different among progenies in each dataset, and the size of genotype-by-environment interactions was comparable. Root vascular traits were not positively correlated with deep rooting traits. From the multi-environment analysis of all five datasets, four key genomic regions related to STA in both joint and separate analyses were detected on chromosome 2 (RM3703-RM6379, RM6933-RM3857), chromosome 4 (RM1388-RM5503) and chromosome 12 (RM247-RM155), with the first and third collocated with deep rooting traits. QTL-by-environment interaction was comparable to the main additive effect. This study is the first report on genomic regions of root vascular traits in a japonica mapping population. GRAPHICAL ABSTRACT
{"title":"Genetic analysis of root vascular traits in a population from two temperate japonica rice ecotypes","authors":"Hanh thi Nguyen, A. Kamoshita, Poornima Ramalingam, Phoura Y","doi":"10.1080/1343943X.2022.2085588","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2085588","url":null,"abstract":"ABSTRACT The genetic basis for root vascular traits in rice, despite its direct impacts on root axial and radial hydraulic conductivity, has not been widely studied compared with deep rooting traits. We used five phenotyping datasets (i.e. from maturity stage grown in upland field in 2013, and from vegetative and maturity stages grown in upland and lowland fields in 2019) to quantify the genotypic variations and genomic regions of root vascular traits in a temperate japonica mapping population (from lowland Otomemochi (OTM) and upland Yumenohatamochi (YHM)). YHM had larger stele transversal area (STA) and total late metaxylem area (LMXA), as well as higher deep root ratio and total root length at deeper layers (>30 cm) than OTM. Root vascular traits were significantly different among progenies in each dataset, and the size of genotype-by-environment interactions was comparable. Root vascular traits were not positively correlated with deep rooting traits. From the multi-environment analysis of all five datasets, four key genomic regions related to STA in both joint and separate analyses were detected on chromosome 2 (RM3703-RM6379, RM6933-RM3857), chromosome 4 (RM1388-RM5503) and chromosome 12 (RM247-RM155), with the first and third collocated with deep rooting traits. QTL-by-environment interaction was comparable to the main additive effect. This study is the first report on genomic regions of root vascular traits in a japonica mapping population. GRAPHICAL ABSTRACT","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"320 - 336"},"PeriodicalIF":2.5,"publicationDate":"2022-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41631307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-06-14DOI: 10.1080/1343943X.2022.2085589
T. Ishimaru, K. Sasaki, Patrick D. Lumanglas, Carlo Leo U. Cabral, C. Ye, M. Yoshimoto, Arvind Kumar, A. Henry
ABSTRACT Rice is most susceptible to heat and drought stress at flowering stage, but flowering characteristics under drought stress are not well characterized. This study investigated flowering characteristics of rice genotypes contrasting in their flower opening time (FOT) and level of drought tolerance. Near-isogenic lines for the early-morning flowering trait (IR64+ qEMF3) and for drought tolerance (IR87707-445-B-B-B), and their recurrent parent cultivar (IR64) were used. IR64+ qEMF3 had stable earlier FOT than IR64 and IR87707-445-B-B-B under drought stress conditions. Drought stress occasionally affects FOT depending on genotype. The number of open spikelets was higher in IR87707-445-B-B-B than in IR64 and IR64+ qEMF3, and the difference among genotypes increased as the rice plants were subjected to more severe stress levels. Panicle temperature increased under drought stress conditions and was similar among genotypes when it was measured at the same time of day, demonstrating that earlier FOT in IR64+ qEMF3 must be beneficial to avoid heat stress at flowering under drought stress conditions. However, IR64+ qEMF3 did not exhibit drought avoidance, as evidenced by the root mass at depth. To assess the potential for the EMF trait to complement ongoing drought breeding efforts, heat tolerance among 13 advanced drought breeding lines and released cultivars was tested. Wide variation in heat tolerance at flowering was observed and, notably, none of the 13 lines possessed the EMF trait. This study therefore proposes that a breeding strategy that transfers the EMF trait into drought tolerant lines could enhance the resilience of rice spikelets to the combined stresses of heat and drought at flowering. Abbreviations: Analysis of variance (ANOVA), dry season (DS), early-morning flowering (EMF), flower opening time (FOT), near-isogenic line (NIL), panicle water potential (PWP), quantitative trait locus (QTL), wet season (WS) Graphical abstract
{"title":"Effect of drought stress on flowering characteristics in rice (Oryza sativa L.): a study using genotypes contrasting in drought tolerance and flower opening time","authors":"T. Ishimaru, K. Sasaki, Patrick D. Lumanglas, Carlo Leo U. Cabral, C. Ye, M. Yoshimoto, Arvind Kumar, A. Henry","doi":"10.1080/1343943X.2022.2085589","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2085589","url":null,"abstract":"ABSTRACT Rice is most susceptible to heat and drought stress at flowering stage, but flowering characteristics under drought stress are not well characterized. This study investigated flowering characteristics of rice genotypes contrasting in their flower opening time (FOT) and level of drought tolerance. Near-isogenic lines for the early-morning flowering trait (IR64+ qEMF3) and for drought tolerance (IR87707-445-B-B-B), and their recurrent parent cultivar (IR64) were used. IR64+ qEMF3 had stable earlier FOT than IR64 and IR87707-445-B-B-B under drought stress conditions. Drought stress occasionally affects FOT depending on genotype. The number of open spikelets was higher in IR87707-445-B-B-B than in IR64 and IR64+ qEMF3, and the difference among genotypes increased as the rice plants were subjected to more severe stress levels. Panicle temperature increased under drought stress conditions and was similar among genotypes when it was measured at the same time of day, demonstrating that earlier FOT in IR64+ qEMF3 must be beneficial to avoid heat stress at flowering under drought stress conditions. However, IR64+ qEMF3 did not exhibit drought avoidance, as evidenced by the root mass at depth. To assess the potential for the EMF trait to complement ongoing drought breeding efforts, heat tolerance among 13 advanced drought breeding lines and released cultivars was tested. Wide variation in heat tolerance at flowering was observed and, notably, none of the 13 lines possessed the EMF trait. This study therefore proposes that a breeding strategy that transfers the EMF trait into drought tolerant lines could enhance the resilience of rice spikelets to the combined stresses of heat and drought at flowering. Abbreviations: Analysis of variance (ANOVA), dry season (DS), early-morning flowering (EMF), flower opening time (FOT), near-isogenic line (NIL), panicle water potential (PWP), quantitative trait locus (QTL), wet season (WS) Graphical abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"12 1","pages":"359 - 370"},"PeriodicalIF":2.5,"publicationDate":"2022-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"59803332","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-06-09DOI: 10.1080/1343943X.2022.2086590
T. Tsukaguchi, Yuri Matsuno, Haruka Kobayashi, Nanako Kameda, Nana Matsue
ABSTRACT Nitrogen (N) partitioning to grain affects productivity and grain quality in rice. The objectives of this study were to clarify the difference between the rice cultivars ‘Momiroman’ (japonica) and ‘Takanari’ (indica) in the relation between the amount of total N in aboveground parts per grain dry weight (TNA/GW) and grain N concentration (GNC), to identify quantitative trait loci (QTLs) associated with the coefficient characterizing this relation by using populations derived from a cross between Momiroman and Takanari, and to verify the effects of the detected QTLs by using near-isogenic lines (NILs). We used 156 F2 plants grown under high N in 2015 and 156 F3 lines grown under high or low N in 2016, and determined N concentrations and contents in grain and aboveground vegetative parts. We found a logarithmic relation between GNC and TNA/GW in Momiroman and Takanari. The regression coefficient (A) was higher in Takanari. Under each N condition, A was calculated for each population and QTL analysis was performed. QTLs for A were detected on chromosomes (Chrs.) 6 and 10 in all conditions; the Takanari alleles of both QTLs increased the value. NILs with the Takanari allele in each region had higher A than NILs with the Momiroman alleles. We conclude that the QTLs for A are associated with N partitioning to grain in rice. Abbreviations: GNA, amount of N in grain; GNC, grain N concentration; GW, grain dry weight; TNA, amount of N in aboveground parts Graphical abstract
{"title":"Identification and validation of quantitative trait loci for a parameter associated with nitrogen partitioning to grain using a population derived from japonica- and indica-type cultivars of rice (Oryza sativa L.)","authors":"T. Tsukaguchi, Yuri Matsuno, Haruka Kobayashi, Nanako Kameda, Nana Matsue","doi":"10.1080/1343943X.2022.2086590","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2086590","url":null,"abstract":"ABSTRACT Nitrogen (N) partitioning to grain affects productivity and grain quality in rice. The objectives of this study were to clarify the difference between the rice cultivars ‘Momiroman’ (japonica) and ‘Takanari’ (indica) in the relation between the amount of total N in aboveground parts per grain dry weight (TNA/GW) and grain N concentration (GNC), to identify quantitative trait loci (QTLs) associated with the coefficient characterizing this relation by using populations derived from a cross between Momiroman and Takanari, and to verify the effects of the detected QTLs by using near-isogenic lines (NILs). We used 156 F2 plants grown under high N in 2015 and 156 F3 lines grown under high or low N in 2016, and determined N concentrations and contents in grain and aboveground vegetative parts. We found a logarithmic relation between GNC and TNA/GW in Momiroman and Takanari. The regression coefficient (A) was higher in Takanari. Under each N condition, A was calculated for each population and QTL analysis was performed. QTLs for A were detected on chromosomes (Chrs.) 6 and 10 in all conditions; the Takanari alleles of both QTLs increased the value. NILs with the Takanari allele in each region had higher A than NILs with the Momiroman alleles. We conclude that the QTLs for A are associated with N partitioning to grain in rice. Abbreviations: GNA, amount of N in grain; GNC, grain N concentration; GW, grain dry weight; TNA, amount of N in aboveground parts Graphical abstract","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"371 - 383"},"PeriodicalIF":2.5,"publicationDate":"2022-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46565115","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-05-22DOI: 10.1080/1343943X.2022.2073896
Daisuke Sasayama, Mayuko Niikawa, T. Hatanaka, H. Fukayama, T. Azuma
ABSTRACT In the present study, 15 accessions of wild rice species belonging to genome groups different from that of Oryza sativa were tested for their adaptive response to flooding at the seedling and mature stages. Under complete submergence at the seedling stage, reduced underwater shoot elongation and high survival rate after the recovery period were observed in the accessions of O. minuta as well as tetraploid O. punctata, O. eichingeri, O. officinalis, O. alta, O. grandiglumis, O. latifolia, and O. australiensis. This suggests that these species exhibit submergence tolerance at the seedling stage. During gradual submergence at mature stage, promoted internodal elongation was observed in the accessions of diploid and tetraploid O. punctata, O. alta, O. grandiglumis, O. latifolia, and O. brachyantha. This suggests that these species possess floating ability. Remarkably, two CCDD genome species, namely O. grandiglumis and O. latifolia, strongly displayed both submergence tolerance at the seedling stage and floating ability at mature stage, suggesting that these species are valuable genetic resources for improving rice adaptability to flooding. SUB1A and SNORKEL genes are known to confer submergence tolerance and floating ability to O. sativa, respectively. However, SUB1A, SNORKEL1, and SNORKEL2 genes were not detected in any of the wild rice accessions investigated in the present study. Our results suggest that adaptive responses to flooding in the investigated wild rice species can be achieved independently of the presence or absence of SUB1A and SNORKEL genes. GRAPHICAL ABSTRACT
{"title":"Adaptive responses to flooding in wild rice species with various genomes other than AA","authors":"Daisuke Sasayama, Mayuko Niikawa, T. Hatanaka, H. Fukayama, T. Azuma","doi":"10.1080/1343943X.2022.2073896","DOIUrl":"https://doi.org/10.1080/1343943X.2022.2073896","url":null,"abstract":"ABSTRACT In the present study, 15 accessions of wild rice species belonging to genome groups different from that of Oryza sativa were tested for their adaptive response to flooding at the seedling and mature stages. Under complete submergence at the seedling stage, reduced underwater shoot elongation and high survival rate after the recovery period were observed in the accessions of O. minuta as well as tetraploid O. punctata, O. eichingeri, O. officinalis, O. alta, O. grandiglumis, O. latifolia, and O. australiensis. This suggests that these species exhibit submergence tolerance at the seedling stage. During gradual submergence at mature stage, promoted internodal elongation was observed in the accessions of diploid and tetraploid O. punctata, O. alta, O. grandiglumis, O. latifolia, and O. brachyantha. This suggests that these species possess floating ability. Remarkably, two CCDD genome species, namely O. grandiglumis and O. latifolia, strongly displayed both submergence tolerance at the seedling stage and floating ability at mature stage, suggesting that these species are valuable genetic resources for improving rice adaptability to flooding. SUB1A and SNORKEL genes are known to confer submergence tolerance and floating ability to O. sativa, respectively. However, SUB1A, SNORKEL1, and SNORKEL2 genes were not detected in any of the wild rice accessions investigated in the present study. Our results suggest that adaptive responses to flooding in the investigated wild rice species can be achieved independently of the presence or absence of SUB1A and SNORKEL genes. GRAPHICAL ABSTRACT","PeriodicalId":20259,"journal":{"name":"Plant Production Science","volume":"25 1","pages":"350 - 358"},"PeriodicalIF":2.5,"publicationDate":"2022-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49097578","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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