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Systemic and Lung Inflammation and Oxidative Stress Associated With Behavioral Changes Induced by Inhaled Paraquat Are Ameliorated by Carvacrol. 香芹酚可改善与吸入百草枯引起的行为改变有关的全身和肺部炎症及氧化应激反应
IF 3.5 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-24 eCollection Date: 2024-01-01 DOI: 10.1155/2024/4049448
Arghavan Memarzia, Fatemeh Amin, Amin Mokhtari-Zaer, Zohre Arab, Saeideh Saadat, Mahrokh Heydari, Zahra Ghasemi, Farzaneh Naghdi, Mahmoud Hosseini, Mohammad Hossein Boskabady

Paraquat (PQ) is an herbicide toxin that induces injury in different organs. The anti-inflammatory and antioxidant effects of carvacrol were reported previously. The effects of carvacrol and pioglitazone (Pio) alone and their combination on inhaled PQ-induced systemic and lung oxidative stress and inflammation as well as behavioral changes were examined in rats. In this study, animals were exposed to saline (control [Ctrl]) or PQ (PQ groups) aerosols. PQ-exposed animals were treated with 0.03 mg/kg/day dexamethasone (Dexa), 20 and 80 mg/kg/day carvacrol (C-L and C-H), 5 mg/kg/day Pio, and Pio+C-L for 16 days. Inhaled PQ markedly enhanced total and differential white blood cell (WBC) counts, nitric oxide (NO), and malondialdehyde (MDA) levels but decreased catalase (CAT) and superoxide dismutase (SOD) activities and thiol levels both in the bronchoalveolar lavage fluid (BALF) and blood and increased interferon-gamma (INF-γ) and interleukin-10 (IL-10) levels in the BALF (p < 0.001 for all cases) except lymphocyte count in blood which was not significantly changed. The escape latency and traveled distance were increased in the PQ group. However, the time spent in the target quadrant in the Morris water maze (MWM) test and the duration of time latency in the dark room in the shuttle box test were reduced after receiving an electrical shock (p < 0.05-p < 0.001). Inhaled PQ-induced changes were significantly improved in carvacrol, Pio, Dexa, and especially in the combination of the Pio+C-L treated groups (p < 0.05-p < 0.001). Carvacrol and Pio improved PQ-induced changes similar to Dexa, but ameliorative effects produced by combination treatments of Pio+C-L were more prominent than Pio and C-L alone, suggesting a potentiating effect for the combination of the two agents.

百草枯(PQ)是一种除草剂毒素,会对不同器官造成伤害。以前曾报道过香芹酚的抗炎和抗氧化作用。本研究以大鼠为研究对象,考察了香芹酚和吡格列酮单独使用或联合使用对吸入 PQ 引起的全身和肺部氧化应激、炎症以及行为变化的影响。在这项研究中,动物暴露于生理盐水(对照组 [Ctrl])或 PQ(PQ 组)气溶胶中。暴露于 PQ 的动物接受了 0.03 毫克/千克/天的地塞米松(Dexa)、20 和 80 毫克/千克/天的香芹酚(C-L 和 C-H)、5 毫克/千克/天的 Pio 和 Pio+C-L 的治疗,为期 16 天。吸入 PQ 显著提高了支气管肺泡灌洗液(BALF)和血液中白细胞(WBC)总数和差异数、一氧化氮(NO)和丙二醛(MDA)水平,但降低了过氧化氢酶(CAT)和超氧化物歧化酶(SOD)活性和硫醇水平,并提高了 BALF 中干扰素-γ(INF-γ)和白细胞介素-10(IL-10)水平(P < 0.001),但血液中的淋巴细胞计数变化不大。PQ 组的逃逸潜伏期和飞行距离均有所增加。然而,在接受电击后,莫里斯水迷宫(MWM)测试中目标象限的停留时间和穿梭箱测试中暗室潜伏时间均缩短(p < 0.05-p < 0.001)。吸入 PQ 引起的变化在香芹酚、Pio、Dexa,特别是在 Pio+C-L 组合治疗组中有明显改善(p < 0.05-p < 0.001)。香芹酚和 Pio 对 PQ 诱导的变化的改善程度与 Dexa 相似,但 Pio+C-L 联合治疗产生的改善效果比 Pio 和 C-L 单独治疗更明显,这表明两种药物的联合治疗具有增效作用。
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引用次数: 0
Shared Mechanisms in Pparγ1sv and Pparγ2 Expression in 3T3-L1 Cells: Studies on Epigenetic and Positive Feedback Regulation of Pparγ during Adipogenesis. 3T3-L1 细胞中 Pparγ1sv 和 Pparγ2 表达的共享机制:脂肪生成过程中 Pparγ 的表观遗传和正反馈调控研究。
IF 3.5 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-06-07 eCollection Date: 2024-01-01 DOI: 10.1155/2024/5518933
Yasuhiro Takenaka, Yoshihiko Kakinuma, Masaaki Ikeda, Ikuo Inoue

We have previously reported the identification of a novel splicing variant of the mouse peroxisome proliferator-activated receptor-γ (Pparγ), referred to as Pparγ1sv. This variant, encoding the PPARγ1 protein, is abundantly and ubiquitously expressed, playing a crucial role in adipogenesis. Pparγ1sv possesses a unique promoter and 5' untranslated region (5'UTR), distinct from those of the canonical mouse Pparγ1 and Pparγ2 mRNAs. We observed a significant increase in DNA methylation at two CpG sites within the proximal promoter region (-733 to -76) of Pparγ1sv during adipocyte differentiation. Concurrently, chromatin immunoprecipitation-quantitative PCR (ChIP-qPCR) using antibodies against H3K4me3 and H3K27ac indicated marked elevations in both methylation and acetylation of histone H3, while the repressive histone mark H3K9me2 significantly decreased, at the transcription start sites of both Pparγ1sv and Pparγ2 following differentiation. Knocking down Pparγ1sv using specific siRNA also led to a decrease in Pparγ2 mRNA and PPARγ2 protein levels; conversely, knocking down Pparγ2 resulted in reduced Pparγ1sv mRNA and PPARγ1 protein levels, suggesting synergistic transcriptional regulation of Pparγ1sv and Pparγ2 during adipogenesis. Furthermore, our experiments utilizing the CRISPR-Cas9 system identified crucial PPARγ-binding sites within the Pparγ gene locus, underscoring their significance in adipogenesis. Based on these findings, we propose a model of positive feedback regulation for Pparγ1sv and Pparγ2 expression during the adipocyte differentiation process in 3T3-L1 cells.

我们以前曾报道过发现了小鼠过氧化物酶体增殖激活受体-γ(Pparγ)的一种新型剪接变体,称为 Pparγ1sv。该变体编码 PPARγ1 蛋白,可大量普遍表达,在脂肪生成过程中起着至关重要的作用。Pparγ1sv具有独特的启动子和5'非翻译区(5'UTR),与小鼠Pparγ1和Pparγ2 mRNA的启动子和5'非翻译区不同。我们观察到,在脂肪细胞分化过程中,Pparγ1sv近端启动子区(-733至-76)的两个CpG位点的DNA甲基化明显增加。同时,使用针对 H3K4me3 和 H3K27ac 的抗体进行染色质免疫共沉淀-定量 PCR(ChIP-qPCR)表明,在分化后,Pparγ1sv 和 Pparγ2 的转录起始位点处,组蛋白 H3 的甲基化和乙酰化均明显升高,而抑制性组蛋白标记 H3K9me2 则显著降低。使用特异性 siRNA 敲除 Pparγ1sv 也会导致 Pparγ2 mRNA 和 PPARγ2 蛋白水平的降低;相反,敲除 Pparγ2 会导致 Pparγ1sv mRNA 和 PPARγ1 蛋白水平的降低,这表明在脂肪形成过程中,Pparγ1sv 和 Pparγ2 的转录调控具有协同作用。此外,我们利用 CRISPR-Cas9 系统进行的实验发现了 Pparγ 基因座中关键的 PPARγ 结合位点,强调了它们在脂肪生成过程中的重要性。基于这些发现,我们提出了一个在 3T3-L1 细胞脂肪细胞分化过程中 Pparγ1sv 和 Pparγ2 表达的正反馈调控模型。
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引用次数: 0
Interaction between Nuclear Receptor and Alpha-Adrenergic Agonist Subtypes in Metabolism and Systemic Hemodynamics of Spontaneously Hypertensive Rats. 核受体和α-肾上腺素能激动剂亚型在自发性高血压大鼠新陈代谢和全身血液动力学中的相互作用
IF 3.5 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-06-07 eCollection Date: 2024-01-01 DOI: 10.1155/2024/5868010
Sheryar Afzal, Munavvar Abdul Sattar, Ibrahim Albokhadaim, Ali Attiq, Mahmoud Kandeel, Aimi Syamima Abdul Manap, Sameer M Alhojaily

Partial and full PPAR-γ agonists have shown promising effects and antihypertensive and antidiabetic agents through increased plasma adiponectin concentration. This study is aimed at examining the role of PPAR-γ, alpha-adrenoceptors, and adiponectin receptors in the modulation of vasopressor responses to angiotensin II (Ang II) and adrenergic agonists, after a subset treatment of partial and full PPAR-γ agonists, each individually, and also when coupled with adiponectin in SHRs. The antioxidant potential and metabolic indices for these animals were also determined. Group I (WKY) and group II (SHR) were designated as normotensive control and hypertensive control, respectively. Groups III (SHR) and IV (SHR) received irbesartan (30 mg/kg) and pioglitazone (10 mg/kg) orally for 28 days, and groups V (SHR), VI (SHR), and VII (SHR) were treated with adiponectin (2.5 μg/kg) intraperitoneally alone, in combination with irbesartan, and in combination with pioglitazone, respectively, from days 21 to 28 only. On day 29, sodium pentobarbitone (60 mg/kg) was used to anesthetize all test animals, and systemic hemodynamic and plasma adiponectin concentrations and in vitro and in vivo antioxidant potential were measured. As compared to the WKY control, the SHR control group's noninvasive blood pressure and basal mean arterial pressure were significantly greater, along with increased arterial stiffness, lower plasma nitric oxide, adiponectin concentration, and antioxidant enzyme levels (all P < 0.05). However, they were gradually normalized by single drug treatments in all groups, and to a greater extent in the SHR + Irb + Adp group (P < 0.05). In the acute study, the dose dependant mean arterial pressure responses to intravenously administered adrenergic agonists and angiotensin-II were significantly larger in SHRs as compared to WKY by 20-25%. Adiponectin alone and in combination significantly blunted vasopressor responses to these alpha-adrenergic agonists in the SHR + Pio + Adp group by 63%, whereas attenuated responses to ANG-II administration to 70% in SHR + Irb + Adp. In conclusion, the combined treatment of adiponectin with PPAR-agonists reduced the systemic vascular responses to adrenergic agonists and improved arterial stiffness. This an evidence of the interaction of adiponectin receptors, PPAR-γ, alpha-adrenoceptors, and ANG-II in the systemic vasculature of SHRs. A significant level of synergism has also been proved among full PPAR-γ agonists and adiponectin receptors.

部分和完全 PPAR-γ 激动剂通过增加血浆脂肪直通素的浓度,显示出了抗高血压和抗糖尿病药物的良好效果。本研究的目的是研究在SHRs中单独使用部分和完全PPAR-γ受体激动剂亚组治疗后,以及在与促肾上腺皮质激素联用时,PPAR-γ、α-肾上腺素受体和促肾上腺皮质激素受体在调节血管紧张素II(Ang II)和肾上腺素受体激动剂的血管舒张反应中的作用。还测定了这些动物的抗氧化潜能和代谢指数。第一组(WKY)和第二组(SHR)分别为正常血压对照组和高血压对照组。第三组(SHR)和第四组(SHR)口服厄贝沙坦(30 毫克/千克)和吡格列酮(10 毫克/千克)28 天,第五组(SHR)、第六组(SHR)和第七组(SHR)仅在第 21 至 28 天分别腹腔注射单用、与厄贝沙坦联用和与吡格列酮联用的脂肪生成素(2.5 微克/千克)。第29天,用戊巴比妥钠(60毫克/千克)麻醉所有受试动物,并测定全身血液动力学和血浆脂肪连通素浓度以及体内外抗氧化潜能。与 WKY 对照组相比,SHR 对照组的无创血压和基础平均动脉压明显升高,动脉僵硬度增加,血浆一氧化氮、脂肪连接蛋白浓度和抗氧化酶水平降低(均 P < 0.05)。然而,单药治疗可使所有组的上述症状逐渐恢复正常,SHR + Irb + Adp 组的恢复程度更高(P < 0.05)。在急性研究中,与 WKY 相比,SHR 对静脉注射肾上腺素能激动剂和血管紧张素-II 的剂量依赖性平均动脉压反应明显要大 20-25%。在 SHR + Pio + Adp 组中,单独使用或联合使用脂肪连接蛋白可明显减弱对这些α-肾上腺素能激动剂的血管加压反应,减弱幅度为 63%,而在 SHR + Irb + Adp 组中,对 ANG-II 给药的反应减弱幅度为 70%。总之,脂肪素与 PPAR 激动剂联合治疗可降低全身血管对肾上腺素能激动剂的反应,并改善动脉僵化。这证明在 SHRs 的全身血管中,脂肪素受体、PPAR-γ、α-肾上腺素受体和 ANG-II 相互作用。PPAR-γ 完全激动剂和脂肪粘连素受体之间的协同作用也得到了证实。
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引用次数: 0
PPARG and the PTEN-PI3K/AKT Signaling Axis May Cofunction in Promoting Chemosensitivity in Hypopharyngeal Squamous Cell Carcinoma PPARG 和 PTEN-PI3K/AKT 信号轴可能共同促进下咽鳞状细胞癌的化疗敏感性
IF 2.9 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-03-11 DOI: 10.1155/2024/2271214
Boxuan Han, Jiaming Chen, Shaoshi Chen, Xixi Shen, Lizhen Hou, Jugao Fang, Meng Lian
It has been demonstrated that PPARG may interact with the PTEN-PI3K/AKT pathway, contributing to its involvement in the chemotherapy treatment of hypopharyngeal squamous cell carcinoma (HSCC). However, the underlying mechanism remains largely unknown. In this study, gene expression profiles of 17 HSCC patients, comprising 8 chemotherapy-sensitive patients (CSP) and 9 chemotherapy-nonsensitive patients (CNSP), were collected and analyzed to investigate expression patterns, correlations, influencing factors of the PPARG-PTEN-PI3K/AKT pathway, and its role in regulating chemosensitivity. The results revealed significantly increased expression (<span><svg height="11.7782pt" style="vertical-align:-3.42938pt" version="1.1" viewbox="-0.0498162 -8.34882 18.973 11.7782" width="18.973pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,0,0)"></path></g><g transform="matrix(.013,0,0,-0.013,11.342,0)"></path></g></svg><span></span><span><svg height="11.7782pt" style="vertical-align:-3.42938pt" version="1.1" viewbox="22.555183800000002 -8.34882 21.921 11.7782" width="21.921pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,22.605,0)"></path></g><g transform="matrix(.013,0,0,-0.013,28.845,0)"></path></g><g transform="matrix(.013,0,0,-0.013,31.809,0)"><use xlink:href="#g113-49"></use></g><g transform="matrix(.013,0,0,-0.013,38.049,0)"></path></g></svg>)</span></span> of AKT1, AKT2, AKT3, PIK3CA, PPARG, and PTEN in the CSP group compared to the CNSP group. Specifically, AKT2 exhibited significant overexpression in tumor tissue (<span><svg height="11.7782pt" style="vertical-align:-3.42938pt" version="1.1" viewbox="-0.0498162 -8.34882 18.973 11.7782" width="18.973pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,0,0)"><use xlink:href="#g113-113"></use></g><g transform="matrix(.013,0,0,-0.013,11.342,0)"></path></g></svg><span></span><span><svg height="11.7782pt" style="vertical-align:-3.42938pt" version="1.1" viewbox="22.555183800000002 -8.34882 21.921 11.7782" width="21.921pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,22.605,0)"><use xlink:href="#g113-49"></use></g><g transform="matrix(.013,0,0,-0.013,28.845,0)"><use xlink:href="#g113-47"></use></g><g transform="matrix(.013,0,0,-0.013,31.809,0)"><use xlink:href="#g113-49"></use></g><g transform="matrix(.013,0,0,-0.013,38.049,0)"></path></g></svg>),</span></span> while AKT2, AKT3, PPARG, and PTEN displayed significant increases in normal tissue (<span><svg height="11.7782pt" style="vertical-align:-3.42938pt" version="1.1" viewbox="-0.0498162 -8.34882 18.973 11.7782" width="18.973pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,0,0)"><use xlink:href="#g113-113"></use></g><g tr
研究表明,PPARG可能与PTEN-PI3K/AKT通路相互作用,从而参与了下咽鳞状细胞癌(HSCC)的化疗。然而,其潜在机制在很大程度上仍然未知。本研究收集并分析了17例HSCC患者(包括8例化疗敏感患者(CSP)和9例化疗不敏感患者(CNSP))的基因表达谱,以研究PPARG-PTEN-PI3K/AKT通路的表达模式、相关性、影响因素及其在调控化疗敏感性中的作用。结果显示,与 CNSP 组相比,CSP 组 AKT1、AKT2、AKT3、PIK3CA、PPARG 和 PTEN 的表达量()明显增加。具体来说,AKT2在肿瘤组织中明显过表达(),而AKT2、AKT3、PPARG和PTEN在正常组织中明显增加()。在 PIK3CA、AKT1、AKT2、AKT3 和 PTEN 之间观察到了正相关(、),AKT2、AKT3 和 PTEN 与 PPARG 也显示出了显著的相关性(、)。年龄、性别和疾病分期对 PPARG、PIK3CA 和 PTEN 的表达没有影响,但可能影响 AKT 的表达。通路分析表明,PPARG可能与PTEN-PI3K/AKT信号通路相互作用,在调节正常组织微环境的化疗敏感性中发挥着重要作用。我们的研究结果表明,AKT1和PIK3CA可能与HSCC肿瘤细胞的化疗敏感性有关,而PPARG和PTEN可能与PI3K/AKT通路的特定环节相关,从而可能影响HSCC患者正常组织微环境中的化疗敏感性。
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引用次数: 0
Peroxisome Proliferator-Activated Receptor γ Regulates Lipid Metabolism in Sheep Trophoblast Cells through mTOR Pathway-Mediated Autophagy 过氧化物酶体增殖物激活受体γ通过mTOR途径介导的自噬调节绵羊滋养细胞脂质代谢
3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-08 DOI: 10.1155/2023/6422804
Kexing Hao, Jing Wang, Hengbin Yu, Lei Chen, Weibin Zeng, Zhengrong Wang, Guangdong Hu
Peroxisome proliferator-activated receptor gamma (PPARγ) is a key nuclear receptor transcription factor that is highly expressed in trophoblastic cells during embryonic attachment and is accompanied by rapid cell proliferation and increased lipid accumulation. We previously showed that the autophagy pathway is activated in cells after activation of PPARγ, accompanied by increased lipid accumulation. In this study, we used PPARγ agonist rosiglitazone and inhibitor GW9662, as well as autophagy activator rapamycin and inhibitor 3-methyladenine, to unravel the probable mechanism of PPARγ engaged in lipid metabolism in sheep trophoblast cells (STCs). After 12 h, 24 h, and 48 h of drug treatment, the levels of autophagy-related proteins were detected by Western blot, the triglyceride content and MDA level of cells were detected by colorimetry, and the lipid droplets and lysosomes were localized by immunofluorescence. We found that PPARγ inhibited the activity of mammalian target of rapamycin (mTOR) pathway in STCs for a certain period of time, promoted the increase of autophagy and lysosome formation, and enhanced the accumulation of lipid droplets and triglycerides. Compared with cells whose PPARγ function is activated, blocking autophagy before activating PPARγ will hinder lipid accumulation in STCs. Pretreatment of cells with rapamycin promoted autophagy with results similar to rosiglitazone treatment, while inhibition of autophagy with 3-methyladenine reduced lysosome and lipid accumulation. Based on these observations, we conclude that PPARγ can induce autophagy by blocking the mTOR pathway, thereby promoting the accumulation of lipid droplets and lysosomal degradation, providing an energy basis for the rapid proliferation of trophoblast cells during embryo implantation. In brief, this study partially revealed the molecular regulatory mechanism of PPARγ, mTOR pathway, and autophagy on trophoblast cell lipid metabolism, which provides a theoretical basis for further exploring the functional regulatory network of trophoblast cells during the attachment of sheep embryos.
过氧化物酶体增殖体激活受体γ (PPARγ)是一种关键的核受体转录因子,在胚胎附着期间在滋养细胞中高度表达,并伴随细胞快速增殖和脂质积累增加。我们之前的研究表明,在PPARγ激活后,细胞中的自噬途径被激活,伴随着脂质积累的增加。本研究利用PPARγ激动剂罗格列酮和抑制剂GW9662,以及自噬激活剂雷帕霉素和抑制剂3-甲基腺嘌呤,揭示了PPARγ参与绵羊滋养细胞脂质代谢的可能机制。药物治疗12 h、24 h、48 h后,采用Western blot检测细胞自噬相关蛋白水平,采用比色法检测细胞甘油三酯含量和MDA水平,采用免疫荧光法定位脂滴和溶酶体。我们发现PPARγ在一定时间内抑制STCs中哺乳动物雷帕霉素靶蛋白(mTOR)途径的活性,促进自噬和溶酶体形成的增加,并增强脂滴和甘油三酯的积累。与激活PPARγ功能的细胞相比,在激活PPARγ之前阻断自噬会阻碍STCs的脂质积累。雷帕霉素预处理细胞可促进细胞自噬,其结果与罗格列酮处理相似,而3-甲基腺苷抑制细胞自噬可减少溶酶体和脂质积累。基于这些观察,我们得出结论,PPARγ可以通过阻断mTOR途径诱导自噬,从而促进脂滴的积累和溶酶体的降解,为胚胎着床过程中滋养细胞的快速增殖提供能量基础。总之,本研究部分揭示了PPARγ、mTOR通路和自噬对滋养层细胞脂质代谢的分子调控机制,为进一步探索绵羊胚胎附着过程中滋养层细胞的功能调控网络提供了理论基础。
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引用次数: 0
Role of PPARG in Chemosensitivity-Regulating Network for Hypopharyngeal Squamous Cell Carcinoma. PPARG在下咽鳞状细胞癌化疗敏感性调节网络中的作用。
IF 2.9 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-09-25 eCollection Date: 2023-01-01 DOI: 10.1155/2023/6019318
Fanyong Kong, Boxuan Han, Jiaming Chen, Xixi Shen, Lizhen Hou, Jugao Fang, Meng Lian

PPARG has been reported to promote chemosensitivity in hypopharyngeal squamous cell carcinoma (HSCC). However, few studies tested its significance in the texture of a complex molecular network regulating chemosensitivity in HSCC. Here, we first employed RNA expression data analysis and literature data mining to uncover candidate genes related to HSCC chemosensitivity. Then, we constructed the molecular network regulating chemosensitivity in HSCC. After that, we employed degree centrality (DC) and weighted centrality (WC) to test the significance of PPARG within the regulating network. Pathway enrichment was done to study the cofunctions of PPARG and the rest of the genes within the network. The findings of our study contribute to the construction of a comprehensive network that regulates HSCC chemosensitivity, consisting of 57 genes, including PPARG. Notably, within this network, PPARG demonstrates a ranking of #5 and #13 based on DC and WC, respectively. Moreover, PPARG is connected to 29 out of the 57 genes and plays roles in multiple functional groups. These top related genes include AKT1, TP53, PTEN, MAPK1, NOTCH1, BECN1, PTGS2, SPP1, and RAC1. PPARG gets enriched in several key functional groups that have been implicated in the regulation of chemosensitivity, including those associated with the response to nutrients, vitamins, and peptides, the cellular response to chemical stress, and the regulation of hormone secretion and growth. Our results emphasize the involvement of PPARG and its interconnectedness with other genes in the regulation of HSCC chemosensitivity.

PPARG已被报道可促进下咽鳞状细胞癌(HSCC)的化疗敏感性。然而,很少有研究测试其在调节HSCC化学敏感性的复杂分子网络结构中的意义。在这里,我们首先采用RNA表达数据分析和文献数据挖掘来揭示与HSCC化疗敏感性相关的候选基因。然后,我们构建了调节HSCC化疗敏感性的分子网络。之后,我们使用度中心性(DC)和加权中心性(WC)来测试PPARG在调节网络中的显著性。通路富集是为了研究PPARG和网络中其他基因的共同功能。我们的研究结果有助于构建一个由57个基因组成的调节HSCC化学敏感性的综合网络,包括PPARG。值得注意的是,在该网络中,PPARG分别基于DC和WC显示了#5和#13的排名。此外,PPARG与57个基因中的29个相连,并在多个官能团中发挥作用。这些顶级相关基因包括AKT1、TP53、PTEN、MAPK1、NOTCH1、BECN1、PTGS2、SPP1和RAC1。PPARG富含与化学敏感性调节有关的几个关键官能团,包括与对营养素、维生素和肽的反应、细胞对化学应激的反应以及激素分泌和生长的调节有关的官能团。我们的研究结果强调PPARG及其与其他基因在HSCC化疗敏感性调节中的相互作用。
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引用次数: 0
Comprehensive Analysis Identifies the PPAR-Targeted Genes Associated with Ovarian Cancer Prognosis and Tumor Microenvironment. 综合分析确定ppar靶向基因与卵巢癌预后和肿瘤微环境相关。
IF 2.9 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.1155/2023/6637414
Xiao-Fei Leng, Gao-Fa Wang, Hao Yin, Feng Wei, Kang-Kang Zeng, Yi-Qun Zhang

Background: There is a significant role for peroxisome proliferator-activated receptors (PPARs) in the development of cancer. Nevertheless, the role of PPARs-related genes in ovarian cancer (OC) remains unclear.

Methods: The open-accessed data used for analysis were downloaded from The Cancer Genome Atlas database, which was analyzed using the R software.

Results: In our study, we comprehensively investigated the PPAR target genes in OC, including their biological role. Meanwhile, a prognosis signature consisting of eight PPAR target genes was established, including apolipoprotein A-V, UDP glucuronosyltransferase 2 family, polypeptide B4, TSC22 domain family, member 1, growth hormone inducible transmembrane protein, renin, dedicator of cytokinesis 4, enoyl CoA hydratase 1, peroxisomal (ECH1), and angiopoietin-like 4, which showed a good prediction efficiency. A nomogram was constructed by combining the clinical feature and risk score. Immune infiltration and biological enrichment analysis were applied to investigate the difference between high- and low-risk patients. Immunotherapy analysis indicated that low-risk patients might respond better to immunotherapy. Drug sensitivity analysis indicated that high-risk patients might respond better to bleomycin, nilotinib, pazopanib, pyrimethamine, and vinorelbine, yet worse to cisplatin and gefitinib. Furthermore, the gene ECH1 was selected for further analysis.

Conclusions: Our study identified a prognosis signature that could effectively indicates patients survival. Meanwhile, our study can provide the direction for future studies focused on the PPARs in OC.

背景:过氧化物酶体增殖物激活受体(PPARs)在癌症的发生发展中起着重要作用。然而,ppars相关基因在卵巢癌(OC)中的作用尚不清楚。方法:从The Cancer Genome Atlas数据库中下载开放获取的分析数据,使用R软件进行分析。结果:在我们的研究中,我们全面研究了PPAR靶基因在OC中的作用,包括它们的生物学作用。同时,建立了由载脂蛋白a - v、UDP糖醛酸糖基转移酶2家族、多肽B4、TSC22结构域家族、成员1、生长激素诱导跨膜蛋白、肾素、细胞分裂专一者4、烯酰辅酶a水合酶1、过氧化物酶体(ECH1)、血管生成素样4等8个PPAR靶基因组成的预后标记,显示出较好的预测效果。结合临床特征和风险评分构建nomogram。应用免疫浸润和生物富集分析探讨高、低危患者的差异。免疫治疗分析表明,低危患者可能对免疫治疗反应更好。药物敏感性分析显示,高危患者对博来霉素、尼罗替尼、帕唑帕尼、乙胺嘧啶和长春瑞滨的反应较好,而对顺铂和吉非替尼的反应较差。进一步选择ECH1基因进行分析。结论:我们的研究确定了一个预后标志,可以有效地指示患者的生存。同时,我们的研究也可以为今后关注OC中ppar的研究提供方向。
{"title":"Comprehensive Analysis Identifies the PPAR-Targeted Genes Associated with Ovarian Cancer Prognosis and Tumor Microenvironment.","authors":"Xiao-Fei Leng,&nbsp;Gao-Fa Wang,&nbsp;Hao Yin,&nbsp;Feng Wei,&nbsp;Kang-Kang Zeng,&nbsp;Yi-Qun Zhang","doi":"10.1155/2023/6637414","DOIUrl":"https://doi.org/10.1155/2023/6637414","url":null,"abstract":"<p><strong>Background: </strong>There is a significant role for peroxisome proliferator-activated receptors (PPARs) in the development of cancer. Nevertheless, the role of PPARs-related genes in ovarian cancer (OC) remains unclear.</p><p><strong>Methods: </strong>The open-accessed data used for analysis were downloaded from The Cancer Genome Atlas database, which was analyzed using the R software.</p><p><strong>Results: </strong>In our study, we comprehensively investigated the PPAR target genes in OC, including their biological role. Meanwhile, a prognosis signature consisting of eight PPAR target genes was established, including apolipoprotein A-V, UDP glucuronosyltransferase 2 family, polypeptide B4, TSC22 domain family, member 1, growth hormone inducible transmembrane protein, renin, dedicator of cytokinesis 4, enoyl CoA hydratase 1, peroxisomal (ECH1), and angiopoietin-like 4, which showed a good prediction efficiency. A nomogram was constructed by combining the clinical feature and risk score. Immune infiltration and biological enrichment analysis were applied to investigate the difference between high- and low-risk patients. Immunotherapy analysis indicated that low-risk patients might respond better to immunotherapy. Drug sensitivity analysis indicated that high-risk patients might respond better to bleomycin, nilotinib, pazopanib, pyrimethamine, and vinorelbine, yet worse to cisplatin and gefitinib. Furthermore, the gene ECH1 was selected for further analysis.</p><p><strong>Conclusions: </strong>Our study identified a prognosis signature that could effectively indicates patients survival. Meanwhile, our study can provide the direction for future studies focused on the PPARs in OC.</p>","PeriodicalId":20439,"journal":{"name":"PPAR Research","volume":"2023 ","pages":"6637414"},"PeriodicalIF":2.9,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10195182/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9505056","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Significance of PPARA as a Treatment Target for Chronic Lymphocytic Leukemia. PPARA作为慢性淋巴细胞白血病治疗靶点的意义。
IF 2.9 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.1155/2023/8456833
Xixi Xiang, Fu Li, Sha Zhou, Yunjing Zeng, Xiaojuan Deng, Hongyang Zhang, Jiali Li, Hongyun Liu, Jun Rao, Lei Gao, Cheng Zhang, Qin Wen, Li Gao, Xi Zhang

Peroxisome proliferator-activated receptor alpha (PPARA) has been suggested as a therapeutic target for chronic lymphocytic leukemia (CLL). However, the underlying molecular mechanism remains largely unclear. In this study, we analyzed DNA next-generation sequencing (NGS) data and clinical information from 86 CLL patients to identify gene markers related to treatment-free survival (TFS) length. We then constructed a genetic network that includes CLL promoters, treatment targets, and TFS-related marker genes. To assess the significance of PPARA within the network, we utilized degree centrality (DC) and pathway enrichment score (EScore). Clinical and NGS data revealed 10 TFS length-related gene markers, including RPS15, FOXO1, FBXW7, KMT2A, NOTCH1, GNA12, EGR2, GNA13, KDM6A, and ATM. Through literature data mining, 83 genes were identified as CLL upstream promoters and treatment targets. Among them, PPARA exhibited a stronger connection to CLL and TFS-related gene markers, as evidenced by its ranking at No. 13 based on DC, compared to most of the other promoters (>84%). Additionally, PPARA co-functions with 70 out of 92 in-network genes in various functional pathways/gene groups related to CLL pathology, such as regulation of cell adhesion, inflammation, reactive oxygen species, and cell differentiation. Based on our findings, PPARA is considered one of the critical genes within a large genetic network that influences the prognosis and TFS of CLL through multiple pathogenic pathways.

过氧化物酶体增殖物激活受体α (PPARA)已被认为是慢性淋巴细胞白血病(CLL)的治疗靶点。然而,潜在的分子机制在很大程度上仍不清楚。在这项研究中,我们分析了来自86名CLL患者的DNA下一代测序(NGS)数据和临床信息,以确定与无治疗生存期(TFS)长度相关的基因标记。然后,我们构建了一个包括CLL启动子、治疗靶点和tfs相关标记基因的遗传网络。为了评估PPARA在网络中的重要性,我们使用了度中心性(DC)和通路富集评分(EScore)。临床和NGS数据显示10个TFS长度相关基因标记,包括RPS15、fox01、FBXW7、KMT2A、NOTCH1、GNA12、EGR2、GNA13、KDM6A和ATM。通过文献数据挖掘,鉴定出83个基因为CLL上游启动子和治疗靶点。其中,与大多数其他启动子相比,PPARA与CLL和tfs相关的基因标记具有更强的联系,其基于DC的排名为第13位(>84%)。此外,在与CLL病理相关的各种功能通路/基因群中,PPARA与92个网络基因中的70个共同起作用,如细胞粘附、炎症、活性氧和细胞分化的调节。根据我们的研究结果,PPARA被认为是通过多种致病途径影响CLL预后和TFS的大型遗传网络中的关键基因之一。
{"title":"Significance of PPARA as a Treatment Target for Chronic Lymphocytic Leukemia.","authors":"Xixi Xiang,&nbsp;Fu Li,&nbsp;Sha Zhou,&nbsp;Yunjing Zeng,&nbsp;Xiaojuan Deng,&nbsp;Hongyang Zhang,&nbsp;Jiali Li,&nbsp;Hongyun Liu,&nbsp;Jun Rao,&nbsp;Lei Gao,&nbsp;Cheng Zhang,&nbsp;Qin Wen,&nbsp;Li Gao,&nbsp;Xi Zhang","doi":"10.1155/2023/8456833","DOIUrl":"https://doi.org/10.1155/2023/8456833","url":null,"abstract":"<p><p>Peroxisome proliferator-activated receptor alpha (PPARA) has been suggested as a therapeutic target for chronic lymphocytic leukemia (CLL). However, the underlying molecular mechanism remains largely unclear. In this study, we analyzed DNA next-generation sequencing (NGS) data and clinical information from 86 CLL patients to identify gene markers related to treatment-free survival (TFS) length. We then constructed a genetic network that includes CLL promoters, treatment targets, and TFS-related marker genes. To assess the significance of PPARA within the network, we utilized degree centrality (DC) and pathway enrichment score (EScore). Clinical and NGS data revealed 10 TFS length-related gene markers, including RPS15, FOXO1, FBXW7, KMT2A, NOTCH1, GNA12, EGR2, GNA13, KDM6A, and ATM. Through literature data mining, 83 genes were identified as CLL upstream promoters and treatment targets. Among them, PPARA exhibited a stronger connection to CLL and TFS-related gene markers, as evidenced by its ranking at No. 13 based on DC, compared to most of the other promoters (>84%). Additionally, PPARA co-functions with 70 out of 92 in-network genes in various functional pathways/gene groups related to CLL pathology, such as regulation of cell adhesion, inflammation, reactive oxygen species, and cell differentiation. Based on our findings, PPARA is considered one of the critical genes within a large genetic network that influences the prognosis and TFS of CLL through multiple pathogenic pathways.</p>","PeriodicalId":20439,"journal":{"name":"PPAR Research","volume":"2023 ","pages":"8456833"},"PeriodicalIF":2.9,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10317583/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9802598","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PPAR-γ Activation Alleviates Osteoarthritis through Both the Nrf2/NLRP3 and PGC-1α/Δψ m Pathways by Inhibiting Pyroptosis. PPAR-γ激活通过Nrf2/NLRP3和PGC-1α/Δψ m途径抑制骨关节炎的热凋亡
IF 2.9 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.1155/2023/2523536
Zhencheng Feng, Qiuxiang Huang, Xingliang Zhang, Pengfei Xu, Siming Li, Dongli Ma, Qingqi Meng

Osteoarthritis (OA) is a common degenerative joint disease with a gradually increasing morbidity in the aging and obese population. Emerging evidence has implicated pyroptosis in the etiology of OA and it may be recognized as a therapeutic target in OA. We have previously reported regarding another disease that peroxisome proliferator-activated receptor gamma (PPAR-γ) activation exerts an anti-inflammatory effect by suppressing the nucleotide-binding and oligomerization domain-like receptor containing protein (NLRP) 3 inflammasome. However, the relationship between PPAR-γ and NLRP3-mediated pyroptosis in OA cartilage and its underlying mechanisms is fully unclear. In this study, we found that the level of NLRP3-mediated pyroptosis in severe lateral femoral condyle cartilage wear in the knee of an OA patient was significantly higher than that in the mild lateral femoral condyle cartilage wear areas. Moreover, in lipopolysaccharide (LPS)/adenosine triphosphate (ATP)-induced primary chondrocytes and knee OA rat models, we demonstrated that activation of PPAR-γ by pioglitazone (Piog) attenuated LPS/ATP-induced chondrocyte pyroptosis and arthritis. These effects were partially counteracted by either blocking the nuclear factor erythroid-2-related factor (Nrf2)/NLRP3 or PGC1-α/Δψ m signaling pathway. Simultaneous depression of these two signaling pathways can completely abrogate the protective effects of Piog on OA and chondrocytes. Taken together, Piog protects OA cartilage against pyroptosis-induced damage by simultaneously activating both the Nrf2/NLRP3 and PGC-1α/Δψ m pathways, which enhances antioxidative and anti-inflammatory responses as well as mitochondrial biogenesis. Therefore, Piog may be a promising agent for human OA cartilage damage in future clinical treatments.

骨关节炎(OA)是一种常见的退行性关节疾病,在老龄化和肥胖人群中发病率逐渐增加。新出现的证据表明,焦亡与OA的病因有关,它可能被认为是OA的治疗靶点。我们之前报道过另一种疾病,过氧化物酶体增殖物激活受体γ (PPAR-γ)激活通过抑制核苷酸结合和寡聚化结构域样受体蛋白(NLRP) 3炎性体发挥抗炎作用。然而,PPAR-γ与nlrp3介导的OA软骨焦亡之间的关系及其潜在机制尚不清楚。在本研究中,我们发现OA患者膝关节严重股骨外侧髁软骨磨损区nlrp3介导的焦下垂水平明显高于轻度股骨外侧髁软骨磨损区。此外,在脂多糖(LPS)/三磷酸腺苷(ATP)诱导的原代软骨细胞和膝关节OA大鼠模型中,我们证明了吡格列酮(Piog)激活PPAR-γ可减轻LPS/ATP诱导的软骨细胞热凋亡和关节炎。这些作用可通过阻断核因子红细胞2相关因子(Nrf2)/NLRP3或PGC1-α/Δψ m信号通路部分抵消。同时抑制这两种信号通路可以完全取消Piog对OA和软骨细胞的保护作用。综上所述,Piog通过同时激活Nrf2/NLRP3和PGC-1α/Δψ m通路来保护OA软骨免受热致损伤,从而增强抗氧化和抗炎反应以及线粒体生物发生。因此,Piog在未来的临床治疗中可能是一种有前景的治疗人OA软骨损伤的药物。
{"title":"PPAR-<i>γ</i> Activation Alleviates Osteoarthritis through Both the Nrf2/NLRP3 and PGC-1<i>α</i>/<i>Δψ</i> <sub>m</sub> Pathways by Inhibiting Pyroptosis.","authors":"Zhencheng Feng,&nbsp;Qiuxiang Huang,&nbsp;Xingliang Zhang,&nbsp;Pengfei Xu,&nbsp;Siming Li,&nbsp;Dongli Ma,&nbsp;Qingqi Meng","doi":"10.1155/2023/2523536","DOIUrl":"https://doi.org/10.1155/2023/2523536","url":null,"abstract":"<p><p>Osteoarthritis (OA) is a common degenerative joint disease with a gradually increasing morbidity in the aging and obese population. Emerging evidence has implicated pyroptosis in the etiology of OA and it may be recognized as a therapeutic target in OA. We have previously reported regarding another disease that peroxisome proliferator-activated receptor gamma (PPAR-<i>γ</i>) activation exerts an anti-inflammatory effect by suppressing the nucleotide-binding and oligomerization domain-like receptor containing protein (NLRP) 3 inflammasome. However, the relationship between PPAR-<i>γ</i> and NLRP3-mediated pyroptosis in OA cartilage and its underlying mechanisms is fully unclear. In this study, we found that the level of NLRP3-mediated pyroptosis in severe lateral femoral condyle cartilage wear in the knee of an OA patient was significantly higher than that in the mild lateral femoral condyle cartilage wear areas. Moreover, in lipopolysaccharide (LPS)/adenosine triphosphate (ATP)-induced primary chondrocytes and knee OA rat models, we demonstrated that activation of PPAR-<i>γ</i> by pioglitazone (Piog) attenuated LPS/ATP-induced chondrocyte pyroptosis and arthritis. These effects were partially counteracted by either blocking the nuclear factor erythroid-2-related factor (Nrf2)/NLRP3 or PGC1-<i>α</i>/<i>Δψ</i> <sub>m</sub> signaling pathway. Simultaneous depression of these two signaling pathways can completely abrogate the protective effects of Piog on OA and chondrocytes. Taken together, Piog protects OA cartilage against pyroptosis-induced damage by simultaneously activating both the Nrf2/NLRP3 and PGC-1<i>α</i>/<i>Δψ</i> <sub>m</sub> pathways, which enhances antioxidative and anti-inflammatory responses as well as mitochondrial biogenesis. Therefore, Piog may be a promising agent for human OA cartilage damage in future clinical treatments.</p>","PeriodicalId":20439,"journal":{"name":"PPAR Research","volume":"2023 ","pages":"2523536"},"PeriodicalIF":2.9,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10070030/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9612116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Peptide Helix-Y12 as Potential Effector for Peroxisome Proliferator-Activated Receptors. 肽螺旋- y12作为过氧化物酶体增殖物激活受体的潜在效应。
IF 2.9 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.1155/2023/8047378
Mauricio Carrillo-Tripp, Yair Reyes, Blanca Delgado-Coello, Jaime Mas-Oliva, Roxana Gutiérrez-Vidal

Peroxisome proliferator-activated receptors (PPARs) are nuclear receptors involved in the regulation of lipids and glucose metabolism, and immune response. Therefore, they have been considered pharmacological targets for treating metabolic diseases, such as dyslipidemia, atherosclerosis, and non-alcoholic fatty liver disease. However, the available synthetic ligands of PPARs have mild to significant side effects, generating the necessity to identify new molecules that are selective PPAR ligands with specific biological responses. This study aimed to evaluate some components of the atheroprotective and hepatoprotective HB-ATV-8 nanoparticles [the amphipathic peptide Helix-Y12, thermozeaxanthin, thermozeaxanthin-13, thermozeaxanthin-15, and a set of glycolipids], as possible ligands of PPARs through blind molecular docking. According to the change in free energy upon protein-ligand binding, ∆G b, thermozeaxanthins show a more favorable interaction with PPARs, followed by Helix-Y12. Moreover, Helix-Y12 interacts with most parts of the Y-shaped ligand-binding domain (LBD), surrounding helix 3 of PPARs, and reaching helix 12 of PPARα and PPARγ. As previously reported for other ligands, Tyr314 and Tyr464 of PPARα interact with Helix-Y12 through hydrogen bonds. Several PPARα's amino acids are involved in the ligand binding by hydrophobic interactions. Furthermore, we identified additional PPARs' amino acids interacting with Helix-Y12 through hydrogen bonds still not reported for known ligands. Our results show that, from the studied ligand set, the Helix-Y12 peptide and Tzeaxs have the most significant probability of binding to the PPARs' LBD, suggesting novel ligands for PPARs.

过氧化物酶体增殖激活受体(PPARs)是参与调节脂质和葡萄糖代谢以及免疫反应的核受体。因此,它们被认为是治疗代谢性疾病的药理学靶点,如血脂异常、动脉粥样硬化和非酒精性脂肪性肝病。然而,现有的合成PPAR配体具有轻微到显著的副作用,因此有必要鉴定具有特异性生物反应的选择性PPAR配体新分子。本研究旨在通过盲分子对接,评估具有动脉粥样硬化保护和肝保护作用的HB-ATV-8纳米颗粒(两性肽螺旋- y12、热玉米黄质、热玉米黄质-13、热玉米黄质-15和一组糖脂)的一些成分作为PPARs可能的配体。根据蛋白与配体结合时的自由能变化∆G b,热玉米黄质与PPARs的相互作用更有利,其次是Helix-Y12。此外,helix - y12与大部分y形配体结合域(LBD)相互作用,围绕ppar的螺旋3,并到达PPARα和PPARγ的螺旋12。与之前报道的其他配体一样,PPARα的Tyr314和Tyr464通过氢键与Helix-Y12相互作用。PPARα的几个氨基酸通过疏水相互作用参与配体结合。此外,我们还发现了其他PPARs氨基酸通过氢键与Helix-Y12相互作用,但在已知配体中尚未报道。我们的研究结果表明,在所研究的配体中,Helix-Y12肽和Tzeaxs与PPARs的LBD结合的可能性最大,这表明PPARs具有新的配体。
{"title":"Peptide Helix-Y<sup>12</sup> as Potential Effector for Peroxisome Proliferator-Activated Receptors.","authors":"Mauricio Carrillo-Tripp,&nbsp;Yair Reyes,&nbsp;Blanca Delgado-Coello,&nbsp;Jaime Mas-Oliva,&nbsp;Roxana Gutiérrez-Vidal","doi":"10.1155/2023/8047378","DOIUrl":"https://doi.org/10.1155/2023/8047378","url":null,"abstract":"<p><p>Peroxisome proliferator-activated receptors (PPARs) are nuclear receptors involved in the regulation of lipids and glucose metabolism, and immune response. Therefore, they have been considered pharmacological targets for treating metabolic diseases, such as dyslipidemia, atherosclerosis, and non-alcoholic fatty liver disease. However, the available synthetic ligands of PPARs have mild to significant side effects, generating the necessity to identify new molecules that are selective PPAR ligands with specific biological responses. This study aimed to evaluate some components of the atheroprotective and hepatoprotective HB-ATV-8 nanoparticles [the amphipathic peptide Helix-Y<sup>12</sup>, thermozeaxanthin, thermozeaxanthin-13, thermozeaxanthin-15, and a set of glycolipids], as possible ligands of PPARs through blind molecular docking. According to the change in free energy upon protein-ligand binding, ∆<i>G</i> <sub>b</sub>, thermozeaxanthins show a more favorable interaction with PPARs, followed by Helix-Y<sup>12</sup>. Moreover, Helix-Y<sup>12</sup> interacts with most parts of the Y-shaped ligand-binding domain (LBD), surrounding helix 3 of PPARs, and reaching helix 12 of PPAR<i>α</i> and PPAR<i>γ</i>. As previously reported for other ligands, Tyr314 and Tyr464 of PPAR<i>α</i> interact with Helix-Y<sup>12</sup> through hydrogen bonds. Several PPAR<i>α</i>'s amino acids are involved in the ligand binding by hydrophobic interactions. Furthermore, we identified additional PPARs' amino acids interacting with Helix-Y<sup>12</sup> through hydrogen bonds still not reported for known ligands. Our results show that, from the studied ligand set, the Helix-Y<sup>12</sup> peptide and Tzeaxs have the most significant probability of binding to the PPARs' LBD, suggesting novel ligands for PPARs.</p>","PeriodicalId":20439,"journal":{"name":"PPAR Research","volume":"2023 ","pages":"8047378"},"PeriodicalIF":2.9,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10122583/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9395758","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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