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Quantum chemistry - from the first steps to linear-scaling electronic structure methods. 量子化学-从第一步到线性缩放电子结构方法。
IF 2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-07 eCollection Date: 2025-11-01 DOI: 10.1515/pac-2025-0603
Daniel Graf, Viktoria Drontschenko, Alexandra Stan-Bernhardt, Christian Ochsenfeld

We first give a brief, incomplete overview over historic milestones leading to the emergence of quantum chemistry, starting from John Dalton's earliest attempts to describe the atom in the early 19th century. After the formulation of the Schrödinger equation in 1926 and the first successful description of covalent bonding using the new theory, it became soon clear that the main challenge ahead was to find efficient approximations to the Schrödinger equation, as was famously stated by Paul A. M. Dirac in 1929. Since then, many quantum-chemical approximations have been introduced, with a key problem being the exponential increase of the computational cost with the system size when approaching the exact solution of the Schrödinger equation. In the second part, we will hence focus on selected techniques to overcome the scaling problem. Finally, we close with some insights into the new and challenging field of reaction network exploration, offering a glimpse into potential future directions of quantum chemistry.

我们首先对导致量子化学出现的历史里程碑做一个简短而不完整的概述,从约翰·道尔顿在19世纪早期最早尝试描述原子开始。在1926年推导出Schrödinger方程,并利用新理论首次成功地描述了共价键之后,很快就清楚了,我们面临的主要挑战是找到Schrödinger方程的有效近似,正如保罗·a·m·狄拉克在1929年所说的那样。从那时起,引入了许多量子化学近似,其中一个关键问题是,当接近Schrödinger方程的精确解时,计算成本随着系统大小呈指数增长。在第二部分中,我们将重点介绍克服缩放问题的技术。最后,我们对反应网络探索的新领域和具有挑战性的领域进行了一些见解,提供了对量子化学潜在未来方向的一瞥。
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引用次数: 0
Does chemistry need more physics? 化学需要更多的物理知识吗?
IF 2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-07-22 eCollection Date: 2025-10-01 DOI: 10.1515/pac-2025-0497
Trond Saue

In this mini-review I look into the physics underlying the theory of electronic structure of atoms and molecules. Quantum mechanics is needed to understand the structure of the periodic table. Special relativity is indispensable for a correct description of the chemistry of the heavy elements. With increased accuracy of quantum chemical calculations, it is natural to ask if chemistry needs more physics.

在这篇简短的综述中,我研究了原子和分子的电子结构理论的物理学基础。理解元素周期表的结构需要量子力学。狭义相对论对于正确描述重元素的化学性质是不可缺少的。随着量子化学计算精度的提高,人们自然会问化学是否需要更多的物理。
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引用次数: 0
Unlocking the chemistry facilitated by enzymes that process nucleic acids using quantum mechanical and combined quantum mechanics-molecular mechanics techniques. 利用量子力学和量子力学与分子力学相结合的技术,解开酶处理核酸所促进的化学过程。
IF 2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-06-19 eCollection Date: 2025-09-01 DOI: 10.1515/pac-2025-0507
Dylan J Nikkel, Stacey D Wetmore

The diverse cellular functions of nucleic acids are made possible by enzymes that catalyze cleavage of glycosidic (nucleobase-sugar) and phosphodiester bonds. Despite advancements in experimental biochemical methods, critical information about such enzyme-catalyzed reactions is difficult to obtain from traditional experiments. However, computational quantum mechanical (QM) methods can provide atomic level details of catalytic pathways that are complementary to experimental data. This perspective highlights various QM techniques used to advance our understanding of enzymes that process nucleic acids. First, select DNA glycosylases are discussed to showcase how QM calculations on nucleoside/tide and small molecule complexes uncover roles of active site interactions and the preferred order of reaction steps along DNA repair pathways. Furthermore, the ability of calculations on nucleic acid-enzyme complexes that combine QM methods with molecular mechanics (MM) force fields to challenge traditional views of enzyme function and lead to consensus for mechanistic pathways is illustrated. Subsequently, QM-based studies of select nucleases are discussed to highlight how this methodology can discern the various strategies enzymes use to cleave nucleic acid backbones. Overall, this contribution underscores the value in combining QM-based computational work with experimental studies to uncover enzyme-facilitated nucleic acid chemistry to be harnessed in future medicinal, biotechnological and materials applications.

核酸的多种细胞功能是由催化糖苷(核碱基-糖)和磷酸二酯键裂解的酶实现的。尽管实验生化方法取得了进步,但这种酶催化反应的关键信息很难从传统的实验中获得。然而,计算量子力学(QM)方法可以提供与实验数据互补的催化途径的原子水平细节。这种观点强调了用于推进我们对处理核酸的酶的理解的各种QM技术。首先,讨论了选择DNA糖基酶,以展示核苷/潮汐和小分子复合物的QM计算如何揭示活性位点相互作用的作用以及沿着DNA修复途径的反应步骤的首选顺序。此外,将QM方法与分子力学(MM)力场相结合的核酸-酶复合物的计算能力挑战了传统的酶功能观点,并对机制途径达成了共识。随后,讨论了基于qm的选择核酸酶的研究,以突出该方法如何识别酶用于切割核酸主干的各种策略。总的来说,这一贡献强调了将基于量子力学的计算工作与实验研究相结合的价值,以揭示酶促进的核酸化学在未来的医学、生物技术和材料应用中所利用的价值。
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引用次数: 0
When theory came first: a review of theoretical chemical predictions ahead of experiments. 当理论先行:实验前的化学理论预测回顾。
IF 2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-26 eCollection Date: 2025-09-01 DOI: 10.1515/pac-2025-0455
Mario Barbatti

For decades, computational theoretical chemistry has provided critical insights into molecular behavior, often anticipating experimental discoveries. This review surveys twenty notable examples from the past fifteen years in which computational chemistry successfully predicted molecular structures, reaction mechanisms, and material properties before experimental confirmation. By spanning fields such as bioinorganic chemistry, materials science, catalysis, and quantum transport, these case studies illustrate how quantum chemical methods have become essential for multidisciplinary molecular sciences. The impact of theoretical predictions across disciplines shows the indispensable role of computational chemistry in guiding experiments and driving scientific discovery.

几十年来,计算理论化学为分子行为提供了重要的见解,经常预测实验发现。本文综述了过去15年来计算化学在实验证实之前成功预测分子结构、反应机制和材料性质的20个显著例子。通过跨越生物无机化学、材料科学、催化和量子输运等领域,这些案例研究说明了量子化学方法如何成为多学科分子科学的关键。跨学科理论预测的影响显示了计算化学在指导实验和推动科学发现方面不可或缺的作用。
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引用次数: 0
Removal of acidic dyes; acid yellow 25 and acid red 4 from wastewater by degassed activated carbon 用脱气活性炭去除废水中的酸性染料;酸性黄 25 和酸性红 4
IF 1.8 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-18 DOI: 10.1515/pac-2024-0240
AlSaba Gul, Sultan Alam, Muhammad Ilyas, Muhammad Zahoor, Muhammad Naveed Umar, Riaz Ullah, Zafar Iqbal
Activated carbon was prepared at 300 °C and 600 °C, characterized by SEM, EDX and XRD, and was then used as an adsorbent for the removal of acidic dyes; acid yellow 25 and acid red 4. The activated carbon prepared at high temperature (600 °C) due to its high carbon contents and surface area was subsequently used as adsorbent for the selected dyes adsorption using batch adsorption approaches to estimate different adsorption parameters. For the estimation of kinetics and equilibrium parameters a number of kinetics and isotherm models were employed. Dyes were adsorbed on activated carbon surface at a high rate for the first 15 min, after which it began to diffuse into the micro pores and thus the process became steady. The rate constant was estimated for first and second order kinetics models. The maximum adsorption capacities recorded were 526.32 mg g−1 for acid red 4 and 555.55 mg g−1 for acid yellow 25. The enthalpy change values recorded were; 19.44 kJ mol−1 for acid yellow 25 adsorption and 16 kJ mol−1 for acid red 4 adsorption, meant that the process is endothermic. The negative values of Gibbs free energy change (−393.28, −1,515.48, −2,634.68 J mol−1) of acid red 4 and acid yellow 25 (−251.72, −1,058.06, −2,367.84 J mol−1) at tested temperatures, confirmed the feasibility and spontaneity of the adsorption processes. The adsorption of dyes on the carbon surface was diffusion-controlled process, as demonstrated by the linear graph of intraparticle diffusion model.
在 300 °C 和 600 °C 下制备活性炭,并通过扫描电镜、电子衍射X射线和X射线衍射对其进行表征,然后将其用作去除酸性染料(酸性黄 25 和酸性红 4)的吸附剂。为了估算动力学和平衡参数,采用了一些动力学和等温线模型。在最初的 15 分钟内,染料以较高的速率吸附在活性炭表面,之后染料开始向微孔扩散,吸附过程趋于稳定。根据一阶和二阶动力学模型估算了速率常数。酸性红 4 和酸性黄 25 的最大吸附容量分别为 526.32 毫克/克和 555.55 毫克/克。记录到的焓变值为:酸性黄 25 吸附 19.44 kJ mol-1,酸性红 4 吸附 16 kJ mol-1,这意味着吸附过程是内热的。在测试温度下,酸性红 4 和酸性黄 25 的吉布斯自由能变化(-393.28, -1,515.48, -2,634.68 J mol-1)为负值(-251.72, -1,058.06, -2,367.84 J mol-1),这证实了吸附过程的可行性和自发性。正如粒子内扩散模型的线性图所示,碳表面对染料的吸附是一个扩散控制过程。
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引用次数: 0
Molecular approach to semiconductors: a shift towards ecofriendly manufacturing and neuroinspired interfaces 半导体的分子方法:向生态友好型制造和神经启发界面转变
IF 1.8 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-13 DOI: 10.1515/pac-2024-0242
Kirill Yu. Monakhov, Christoph Meinecke, Marco Moors, Carolin Schmitz-Antoniak, Thomas Blaudeck, Julia Hann, Christopher Bickmann, Danny Reuter, Thomas Otto, Stefan E. Schulz, Harish Parala, Anjana Devi
Energy dissipation through physical downscaling towards more complex types of memory and logic devices, loss of ultrapure water and consumption of large amounts of (toxic) chemicals for wafer cleaning processes, as well as high thermal budget of solid-state synthesis and thin film growth of standard semiconductors including the use of rare earth elements – all this poses great challenges for semiconductor materials science and technology. Therefore, research and development of alternative methods for micro- and nanofabrication and chemical functionalization of a new type of resource- and energy-efficient semiconductors as the core component of every computer chip is crucial. One of the promising opportunities is the transformation of today’s complementary metal-oxide-semiconductor (CMOS) electronics into ecofriendly and neuroinspired electronics driven by molecular design and multi-level switching mechanisms at room temperature. The sustainable chemical technology of electron transport and switching materials in semiconductor manufacturing and the development of devices with new unconventional nanophysics, improved performance, and augmented functionalities (beyond-CMOS and More-than-Moore) is becoming increasingly important in the context of a gradual transition to a future-oriented concept of Internet of Everything (IoE). In this article, we focus on the technological significance of semiconductor preparation from single-source (molecular) precursors and the prospect of functionalizing semiconductors using DNA origami nanotechnology and stimuli-responsive metal–oxygen cluster ions such as polyoxometalates (POMs). We also describe the advanced characterization of these qualified molecular systems by soft X-rays. We emphasize the technical relevance of using solution-based methods for the bottom-up preparation of novel and hybrid semiconductors as well as their challenging scalability and the compatibility of methods of molecular technology with lithography-based mass production. Our article aims to contribute to the achievement of the United Nations’ Sustainable Development Goal 9 (Industry, Innovation and Infrastructure).
通过物理降级实现更复杂类型的存储器和逻辑器件的能量消耗、超纯水的损耗、晶圆清洗过程中大量(有毒)化学品的消耗,以及标准半导体固态合成和薄膜生长的高热预算(包括稀土元素的使用)--所有这些都对半导体材料科学与技术提出了巨大挑战。因此,研究和开发微纳米制造和化学功能化的替代方法,使新型资源和能源效率高的半导体成为每个计算机芯片的核心部件至关重要。其中一个大有可为的机会是将当今的互补金属氧化物半导体(CMOS)电子器件转变为由分子设计和室温下多级开关机制驱动的环保型神经启发电子器件。在逐步过渡到面向未来的万物互联(IoE)概念的背景下,半导体制造中电子传输和开关材料的可持续化学技术,以及具有新的非常规纳米物理特性、更高性能和增强功能(超越 CMOS 和 More-than-Moore)的器件开发正变得越来越重要。在这篇文章中,我们将重点讨论从单源(分子)前体制备半导体的技术意义,以及利用 DNA 折纸纳米技术和刺激响应型金属氧簇离子(如聚氧金属盐 (POM))实现半导体功能化的前景。我们还介绍了利用软 X 射线对这些合格分子系统进行高级表征的方法。我们强调了使用基于溶液的方法自下而上制备新型和混合半导体的技术相关性,以及其具有挑战性的可扩展性和分子技术方法与基于光刻技术的大规模生产的兼容性。我们的文章旨在为实现联合国可持续发展目标 9(工业、创新和基础设施)做出贡献。
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引用次数: 0
The impact of nanofiller composition and nature on the enhancement of mechanical and rheological properties of poly(lactic acid) (PLA) nanobiocomposite films is achieved by regulating the spacing of organic fillers and PLA crystallinity 通过调节有机填料的间距和聚乳酸的结晶度,研究纳米填料的组成和性质对提高聚乳酸纳米生物复合膜的机械和流变特性的影响
IF 1.8 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-11 DOI: 10.1515/pac-2024-0253
Zoulikha Khiati, Soufiane Guella, Lahouari Mrah, Abdelmoumin Mezrai
This study examines the morphology and various thermal, mechanical, and rheological properties of polylactic acid (PLA)-based nanobiocomposites. The objective of this investigation is to evaluate the potential of modified Algerian clay as a nanofiller through an examination of the characteristics of PLA/Mag-CTA and PLA/CMC nanobiocomposites with varying levels of prepared fillers. This study is concerned with the synthesis of poly(lactic acid)/Maghnite-CTA (PLA/Mag-CTA) and poly(lactic acid)/microcrystalline cellulose (CMC) nanobiocomposites, with two distinctive catalysts and organic reinforcements produced in solution. The outcomes of the various techniques employed demonstrate that PLA nanobiocomposites exhibit a mixed morphology, comprising intercalation and exfoliation. The results from the diverse techniques used show that the PLA nanobiocomposites developed have a mixed intercalated-exfoliated morphology. The dispersion of the Maghnite-CTA filler and microcrystalline cellulose was enhanced during the production of the various materials, as well as the presence of aggregates at high levels. The best rheological performance, corresponding to the optimal dispersion of the nanofiller, was observed for a low quantity of organic filler. Thermal behavior properties were significantly enhanced with the incorporation of the two nanofillers. Analysis by steric exclusion chromatography showed that the fillers used in the nanobiocomposite synthesis increased the average molecular weights of the PLA chains, while the polydispersity index remained constant.
本研究探讨了基于聚乳酸(PLA)的纳米生物复合材料的形态以及各种热、机械和流变特性。本研究的目的是通过研究含有不同水平制备填料的聚乳酸/Mag-CTA 和聚乳酸/CMC 纳米生物复合材料的特性,评估改性阿尔及利亚粘土作为纳米填料的潜力。本研究采用两种不同的催化剂和在溶液中生产的有机增强剂,合成聚乳酸/麦饭石-CTA(PLA/Mag-CTA)和聚乳酸/微晶纤维素(CMC)纳米生物复合材料。所采用的各种技术的结果表明,聚乳酸纳米生物复合材料呈现出混合形态,包括插层和剥离。所采用的各种技术的结果表明,所开发的聚乳酸纳米生物复合材料具有夹层-剥离混合形态。在各种材料的生产过程中,Maghnite-CTA 填料和微晶纤维素的分散性得到了提高,同时也出现了高水平的聚集体。有机填料用量少时,流变性能最佳,达到了纳米填料的最佳分散状态。加入这两种纳米填料后,热行为特性明显增强。立体排阻色谱分析显示,纳米生物复合材料合成中使用的填料增加了聚乳酸链的平均分子量,而多分散指数保持不变。
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引用次数: 0
Green chemistry for all: three principles of Inclusive Green and Sustainable Chemistry Education 全民绿色化学:全纳绿色和可持续化学教育的三项原则
IF 1.8 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-08-30 DOI: 10.1515/pac-2024-0245
Carlos Alberto da Silva Júnior, Gildo Girotto Júnior, Carla Morais, Dosil Pereira de Jesus
The three principles of Inclusive Green and Sustainable Chemistry Education (IGSCE) are presented to guide the reflection, design, and implementation of potentially inclusive materials and approaches. These principles refer to (i) embracing student-centered learning, (ii) promoting teaching in the five levels of representation in chemistry, and (iii) adapting the curriculum to empower students to apply their academic skills effectively to real-life situations through supportive teaching and social guidance. Educational elements conducive to potentially inclusive classrooms and their interconnections are identified and discussed. These include using the Triangular Bipyramid Metaphor (TBM) to facilitate academic inclusivity for individuals with and without disabilities, such as those who are deaf and blind. Further, the importance of ensuring that all students, regardless of their abilities, can fully participate in the educational experience is highlighted, aligning with Sustainable Development Goal 4 (SDG #4) to achieve inclusive education and lifelong learning opportunities. Green chemistry should be available to everyone, not just a few. It promotes sustainable development and deserves global recognition and support. The change agents targeted by these three principles of IGSCE include, but are not limited to, educators, researchers, teachers, and students in secondary and university education.
介绍了 "全纳绿色可持续化学教育"(IGSCE)的三大原则,以指导思考、设计和实 施潜在的全纳教材和方法。这些原则是指:(i) 接受以学生为中心的学习;(ii) 促进化学五级表征的教学;(iii) 调整课程,通过支持性教学和社会指导,使学生能够将其学术技能有效地应用到现实生活中。确定并讨论了有利于潜在全纳课堂的教育要素及其相互联系。其中包括使用三角双金字塔隐喻法(TBM)来促进学术上的全纳性,无论残疾与否,如聋人和盲人。此外,还强调了确保所有学生,无论其能力如何,都能充分参与教育体验的重要性,这与实现全纳教育和终身学习机会的可持续发展目标 4(SDG #4)是一致的。绿色化学应面向所有人,而不仅仅是少数人。绿色化学促进可持续发展,值得全球认可和支持。IGSCE 这三项原则所针对的变革推动者包括但不限于教育工作者、研究人员、教师以及中学和大学教育中的学生。
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引用次数: 0
The case of the disappearing energy: potential energies in concentration gradients 消失的能量:浓度梯度中的势能
IF 1.8 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-08-26 DOI: 10.1515/pac-2024-0220
Lee D. Hansen, Brian F. Woodfield, H. Dennis Tolley
This paper reviews observations on processes involving concentration gradients to show that (1) Concentration gradients can do external work during discharge if the system is arranged in a manner that requires it. (2) Work has to be done on the system (i.e. energy has to be added) to create a concentration gradient. (3) Concentration gradients can spontaneously discharge with no change in energy except interaction energy. These three observations are significant since, together, these observations demonstrate an apparent violation of the law of conservation of energy which is resolved by proposing that a probability field is a common element for all concentration gradients. This paper thus introduces two new concepts into thermodynamics: (1) Many spontaneous processes occur because of an increase in probability, not because of a decrease in the energy state of the system. (2) Concentration gradients coincide with a probability field and a constraint-dependent and temperature-dependent potential energy.
本文回顾了对涉及浓度梯度的过程的观察,以说明:(1) 如果系统的布置方式需要外功,浓度梯度可以在排放过程中做外功。(2) 必须对系统做功(即增加能量)才能产生浓度梯度。(3) 除了相互作用能之外,浓度梯度可以在能量不变的情况下自发放电。这三个观察结果具有重要意义,因为这些观察结果表明,能量守恒定律显然受到了违反,而提出概率场是所有浓度梯度的共同要素,则可以解决这一问题。因此,本文在热力学中引入了两个新概念:(1)许多自发过程的发生是由于概率的增加,而不是由于系统能量状态的降低。(2) 浓度梯度与概率场以及与约束条件和温度相关的势能相吻合。
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引用次数: 0
Outreach in coordinated individual events: the GCS format of CNR Italy 在协调的个别活动中开展外联:意大利国家科学研究中心的 GCS 模式
IF 1.8 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-08-22 DOI: 10.1515/pac-2024-0238
Elisa Carignani, Augusta Maria Paci, Silvia Borsacchi, Maurizio Peruzzini
Global Conversation on Sustainability (GCS) 2023 was enthusiastically welcomed by researchers of the National Research Council of Italy (CNR). Highly committed to international organizations such as IUPAC and ISC, the promoters participated to the 2023 edition of the Global Conversation on Sustainability hosting a local in person event held in one of the major CNR institute for chemistry research. The format was a round-table discussion involving colleagues of different age, gender, experience, and area of expertise, who participated to an informal dialogue with the aim of reflecting and sharing aspects of the respective research activities contributing to sustainable development goals. From many chemistry research areas, it emerged a wide range of subjects, which stimulated an interesting and purpose-oriented discussion. Therefore, GCS 2023 at CNR prompted a reflection on how improving chemists’ impact on sustainability including laboratories’ practises and on considering communication becoming part of scientific process. Transformation requires continuous investment in research and innovation and evolving scientific activities, but also requires synergies, collaborations and policy making on cross-cutting issues that can make this successful. Global initiatives as GCS, in the framework of international scientific organizations, represent a key global vehicle for enhancing the big area of science communication. Overcoming time and spatial limitations, these initiatives enable to link global and locally tailored in person events.
2023 年可持续发展全球对话(GCS)受到了意大利国家研究理事会(CNR)研究人员的热烈欢迎。他们对国际理论化学和应用化学联合会(IUPAC)和国际可持续发展委员会(ISC)等国际组织作出了高度承诺,并参与了 2023 年可持续发展全球对话,在国家研究理事会的一个主要化学研究所举办了一次当地活动。活动以圆桌讨论的形式进行,不同年龄、性别、经验和专业领域的同事参加了非正式对话,旨在反思和分享各自研究活动对可持续发展目标的贡献。在众多化学研究领域中,出现了广泛的主题,激发了一场有趣的、以目标为导向的讨论。因此,在国家科学研究中心举办的 2023 年全球化学大会促使人们思考如何提高化学家对可持续发展的影响,包括实验室的实践,以及如何将交流视为科学进程的一部分。转型需要对研究和创新以及不断发展的科学活动进行持续投资,但同时也需要在跨领域问题上进行协同、合作和政策制定,这样才能取得成功。国际科学组织框架内的全球科学大会(GCS)等全球倡议是加强科学传播这一重大领域的重要全球工具。这些倡议克服了时间和空间的限制,能够将全球活动与因地制宜的个人活动联系起来。
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引用次数: 0
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