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Antimicrobial activity of Streptomyces spp. isolated from bean rhizospheric soil against Xanthomonas sp. 大豆根际土壤链霉菌对黄单胞菌的抑菌活性研究。
IF 2.1 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-08-18 DOI: 10.1016/j.ram.2025.07.002
Jesús Rafael Trinidad-Cruz, Gabriel Rincón-Enríquez, Zahaed Evangelista-Martínez, Evangelina Esmeralda Quiñones-Aguilar

Species of the genus Streptomyces are a promising strategy for bacterial disease management in agriculture crops. The present study aimed to isolate and identify Streptomyces-like actinobacteria from rhizospheric soil using physical pretreatments and to evaluate their antimicrobial activity against Xanthomonas sp. A rhizospheric soil from a bean plantation was pretreated using dry heat or microwave radiation for isolating actinobacteria. Antimicrobial activity was evaluated using the double agar layer method; 73 isolates exhibiting Streptomyces colony characteristics were obtained from the soil after dry heat pre-treatment series (50 BVBZ) and microwaves (23 BVBZMW); 34 BVBZ (68%) isolates inhibited Xanthomonas sp. growth with 11.2-35.8mm halos in diameter. Fifteen (15) of 23 BVBZMW isolates (65%) recorded inhibition zones ranging from 15.7 to 73.6mm in diameter. The 16S rRNA gene sequence analysis confirmed three isolates with greater antimicrobial activity belonging to the genus Streptomyces. Streptomyces sp. BVBZ 35, BVBZ 47, and BVBZMW 18 shared greater 16S rRNA gene sequence identity with S. monomycini NRRL B-2409T (100%), S. nogalater JCM 4799T (99.38%) and S. leeuwenhoekii C34T (99.45%), respectively. Streptomyces sp. BVBZMW 18, which exhibited the highest antimicrobial activity, could only be cultured after microwave irradiation of the soil. Streptomyces species isolated from rhizospheric soil using physical pretreatments are a potentially novel antimicrobial source for Xanthomonas disease control.

链霉菌属是一种很有前途的农业作物细菌性病害管理策略。本研究旨在利用物理预处理方法从根际土壤中分离和鉴定链霉菌样放线菌,并评价其对黄单胞菌的抑菌活性。采用干热或微波预处理方法分离豆园根际土壤放线菌。采用双琼脂层法测定其抑菌活性;经干热预处理系列(50 BVBZ)和微波预处理系列(23 BVBZMW)从土壤中分离得到73株链霉菌菌落特征;34株BVBZ(68%)抑制黄单胞菌生长,光晕直径为11.2 ~ 35.8mm。23株BVBZMW菌株中15株(65%)的抑菌区直径在15.7 ~ 73.6mm之间。16S rRNA基因序列分析证实了3株具有较强抗菌活性的菌株属于链霉菌属。链霉菌sp. bvbz35、bvbz47和BVBZMW 18分别与S. monomycini NRRL B-2409T(100%)、S. nogalater JCM 4799T(99.38%)和S. leeuwenhoekii C34T(99.45%)具有较高的16S rRNA基因序列同源性。抗菌活性最高的Streptomyces sp. BVBZMW 18只能在土壤微波照射下培养。利用物理预处理从根际土壤中分离出的链霉菌是控制黄单胞菌病的一种潜在的新型抗菌来源。
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引用次数: 0
Severe disseminated nfections in cohabiting people: Genotypic description of methicillin-susceptible Staphylococcus aureus (MSSA) isolate belonging to CC398 clonal complex. 同居人群的严重播散性感染:属于CC398克隆复合体的甲氧西林敏感金黄色葡萄球菌(MSSA)分离物的基因型描述
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-24 DOI: 10.1016/j.ram.2025.06.003
Lucía Rago, Gabriela Rubinstein, Carlos Federico Spinelli, María Sol Haim, Tomás Poklépovich Caride, Sabrina Di Gregorio, Marta Mollerach

In this study, we describe two closely related cases of multifocal MSSA infections within the same household. The dissemination of infection was severe in both cases, but none of the patients presented endocarditis. All isolates shared resistance to erythromycin and clindamycin (inducible macrolide resistance phenotype, iMLSb). The genomic analysis of one of the isolates indicated that it belongs to the human-associated CC398-MSSA clonal complex, an emerging lineage in our region. Whole genome sequencing enabled the characterization and differentiation of this clone from the livestock-associated CC398-MSSA lineage.

在这项研究中,我们描述了两个密切相关的病例多灶MSSA感染在同一家庭。两例患者感染传播严重,但均未出现心内膜炎。所有分离株均对红霉素和克林霉素耐药(诱导型大环内酯耐药表型,iMLSb)。其中一个分离株的基因组分析表明,它属于人类相关的CC398-MSSA克隆复合体,这是我们地区一个新兴的谱系。全基因组测序使该克隆与家畜相关的CC398-MSSA谱系进行了表征和分化。
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引用次数: 0
Clinical management of Lancefieldella parvula bacteremia: A case study and review of the literature. 小苗兰斯菲尔德菌血症的临床处理:个案研究及文献回顾。
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-24 DOI: 10.1016/j.ram.2025.06.004
Cynthia Wenglinski, Delphine Martiny, Michael Watchi, Fabio Silvio Taccone, Charles-Hervé Vacheron

This report presented the case of a 55-year-old patient who was admitted to the intensive care unit following a ruptured bronchial arteriovenous malformation (AVM). The patient, with no significant medical history, experienced massive hemoptysis leading to cardiac arrest. After successful resuscitation and embolization of the AVM, the patient developed fever and acute respiratory distress syndrome, requiring deep sedation, muscle paralysis, and prone positioning. Blood culture sampled on the day of admission tested positive for Lancefieldella parvula on day 4. The patient received targeted antimicrobial therapy, resulting in a favorable hemodynamic and respiratory outcome. No source of the bacteremia was found. We reported the general management of this rare cause of bacteremia and provided a review of the existing literature.

本文报告了一例55岁的患者,因支气管动静脉畸形(AVM)破裂而被送进重症监护病房。患者无明显病史,大量咯血导致心脏骤停。在AVM成功复苏和栓塞后,患者出现发烧和急性呼吸窘迫综合征,需要深度镇静、肌肉麻痹和俯卧位。入院当天血液培养第4天检测为小叶兰斯菲尔德菌阳性。患者接受了靶向抗菌治疗,血流动力学和呼吸结果良好。没有发现菌血症的来源。我们报道了这种罕见菌血症的一般治疗方法,并对现有文献进行了回顾。
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引用次数: 0
Phenotypic and genomic surveillance of invasive Neisseria meningitidis isolates in Argentina (2015-2022): Clonal structure and vaccine implications. 阿根廷侵袭性脑膜炎奈瑟菌分离株的表型和基因组监测(2015-2022):克隆结构和疫苗意义
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-10 DOI: 10.1016/j.ram.2025.04.005
Adriana Efron, Luciana Moreira, Federico Lorenzo, Denise De Belder, María Moscoloni, Alejandra Corso, Mauricio Santos, Tomás Poklepovich, Josefina Campos, Paula Gagetti, María Sol Haim

Invasive meningococcal disease is associated with high fatality rates and disabling sequelae. The aims of this study were to describe the phenotypic and genotypic characteristics of invasive Neisseria meningitidis isolates in Argentina, determine the genomic population structure and evaluate the potential coverage of vaccines targeting N. meningitidis serogroup B (MenB). During the period 2015-2022, a total of 444 isolates of N. meningitidis causing invasive disease were assessed through laboratory surveillance; 344 isolates were available for whole genome sequencing characterization. The presence of antimicrobial resistance genes, and the distribution of clonal complexes and vaccine antigens were analyzed. MenB was the most frequent serogroup (53.2%), followed by MenW (32.0%). Most isolates were susceptible to the antimicrobial agents tested; however, 56.7% exhibited intermediate resistance to penicillin. MenB showed wide genetic diversity and was mainly associated with ST-865 cc, ST-35 cc, ST-41/44 cc, and ST-32 cc. Unlike other countries, in Argentina, ST-865 cc was one of the major clonal complexes associated with MenB, MenW was only associated with ST-11 cc. To study the potential coverage of vaccines targeting MenB, we used the MenDeVAR (Meningococcal Deduced Vaccine Antigen Reactivity) index, which provides information on the presence and possible immunological cross-reactivity of the different vaccine antigenic variants. MenDeVar showed 19.3% vaccine reactivity for 4CMenB and 40.0% for the bivalent vaccine. Laboratory surveillance is essential for generating evidence-based decisions for updating vaccination strategies.

侵袭性脑膜炎球菌病具有高致死率和致残后遗症。本研究的目的是描述阿根廷侵袭性脑膜炎奈瑟菌分离株的表型和基因型特征,确定基因组群体结构,并评估针对脑膜炎奈瑟菌血清B组(MenB)的疫苗的潜在覆盖率。2015-2022年,通过实验室监测共鉴定444株引起侵袭性疾病的脑膜炎奈瑟菌;344株菌株可进行全基因组测序鉴定。分析了耐药基因的存在、克隆复合物和疫苗抗原的分布。MenB是最常见的血清组(53.2%),其次是MenW(32.0%)。多数分离株对抗菌药物敏感;然而,56.7%的人对青霉素表现出中度耐药。MenB具有广泛的遗传多样性,主要与ST-865 cc、ST-35 cc、ST-41/44 cc和ST-32 cc相关。与其他国家不同的是,在阿根廷,ST-865 cc是与MenB相关的主要克隆复合物之一,而MenW仅与ST-11 cc相关。为了研究针对MenB的疫苗的潜在覆盖率,我们使用MenDeVAR(脑膜炎球菌推定疫苗抗原反应性)指数。这提供了不同疫苗抗原变体的存在和可能的免疫交叉反应性的信息。MenDeVar对4CMenB疫苗的反应性为19.3%,对二价疫苗的反应性为40.0%。实验室监测对于制定基于证据的决策以更新疫苗接种战略至关重要。
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引用次数: 0
The re-emergence of vaccine-preventable diseases: The case of measles 疫苗可预防疾病的再次出现:麻疹病例
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-01 DOI: 10.1016/j.ram.2025.07.001
Andrea Pontoriero , Maria Laura Minassian
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引用次数: 0
Analysis of intestinal microbiota diversity in children with non-organic anorexia 非器质性厌食症患儿肠道菌群多样性分析。
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-01 DOI: 10.1016/j.ram.2025.02.001
Wei Lu, Zong-long Li, De-yong Xu, Guo-ping Yu
The pathogenesis of non-organic anorexia in children is not clear. This study intends to analyze intestinal bacteria to provide a relevant theoretical basis for the clinical rational selection of microecological agents. In the present study, children with non-organic anorexia were included in the anorexia group and normal healthy children in the control group. Stool samples were collected for the bioinformatics analysis after PCR and high-throughput sequencing. The results showed that the Ace, Chao, and Shannon indexes in the anorexia group were higher than those in the control group, while the Simpson index in the control group was lower than in the anorexia group. There were 14 taxa in the anorexia group and 11 taxa in the healthy control group at the phylum level, and 193 taxa in the anorexia group and 180 in the control group at the genus level. The dominant bacteria at the phylum level of the two groups were the same, while there were 16 dominant bacteria taxa in the anorexia group and 17 in the control group at the genus level. The ratio of percentage abundance of Bacteroidetes to that of Firmicutes (the B/F index) in the anorexia group was higher than in the control group. The abundance of Bacteroidetes in the anorexia group was higher than that in the control group, and the abundance of Actinomycetes in the control group was higher than that in the anorexia group. There were significant differences in 14 dominant genera between the two groups at the genus classification level. The LEfSe multilevel species difference analysis showed that at the phylum level, the significant influential bacterial taxa in the anorexia group were Bacteroidetes and Actinobacteria in the control group. At the genus level, the significant influential bacterial taxa in the anorexia group were Bacteroides, Faecalibacterium, and Subdoligranulum, and Bifidobacterium, Blautia, Streptococcus, Lachnoclostridium, and Erysipelatoclostridium in the control group. We conclude that the increase in Bacteroides abundance or in the B/F index and the reduction in Bifidobacterium abundance were related to the pathogenesis of anorexia.
儿童非器质性厌食症的发病机制尚不清楚。本研究拟对肠道菌群进行分析,为临床合理选择微生态制剂提供相关理论依据。本研究以非器质性厌食症患儿为厌食症组,正常健康患儿为对照组。收集粪便标本,经PCR和高通量测序进行生物信息学分析。结果显示,厌食症组的Ace、Chao、Shannon指数均高于对照组,对照组的Simpson指数低于厌食症组。在门水平上厌食症组有14个类群,健康对照组有11个类群;在属水平上厌食症组有193个类群,健康对照组有180个类群。两组在门水平的优势菌群相同,而厌食症组在属水平上有16个优势菌群,对照组有17个优势菌群。厌食症组拟杆菌门(Bacteroidetes)与厚壁菌门(Firmicutes)的百分比丰度比(B/F指数)高于对照组。厌食症组拟杆菌门(Bacteroidetes)丰度高于对照组,放线菌门(actinomytes)丰度高于厌食症组。在属分类水平上,两组间有14个优势属存在显著差异。LEfSe多水平物种差异分析显示,在门水平上,厌食症组影响显著的细菌类群是对照组的拟杆菌门(Bacteroidetes)和放线菌门(Actinobacteria)。在属水平上,厌食症组影响显著的细菌类群为拟杆菌(Bacteroides)、粪杆菌(Faecalibacterium)和亚doligranulum,对照组影响显著的细菌类群为双歧杆菌(Bifidobacterium)、蓝杆菌(Blautia)、链球菌(Streptococcus)、Lachnoclostridium和丹毒杆菌(Erysipelatoclostridium)。我们认为,拟杆菌丰度或B/F指数的增加和双歧杆菌丰度的减少与厌食症的发病机制有关。
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引用次数: 0
Wheat straw amendment to an oily sludge pretreated with ammonium persulfate and its impact on the indigenous mycobiota 麦秸改性过硫酸铵预处理含油污泥及其对本地真菌群的影响。
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-01 DOI: 10.1016/j.ram.2025.05.002
Natalia Andrea Di Clemente , Marina Peluffo , Ana Carolina Agnello , Deborah Colman , Norma Buceta , María Teresa Del Panno , Mario Carlos Nazareno Saparrat
Numerous studies have addressed the dynamics of bacterial communities in response to remediation strategies, while fungal communities, despite their potential as bioremediation agents, remain comparatively understudied. The aim of this work was to evaluate the impact of wheat straw amendment (WSA) on an oily sludge untreated and treated with ammonium persulfate on indigenous mycobiota after 60 days. Culture-independent 18S rRNA amplicon sequencing, microbial enzymatic activity and chemical parameters were analyzed. WSA on a preoxidized oily sludge promoted high total petroleum hydrocarbon (TPH) removal after 60 days, exhibiting the highest laccase activity. Fungal diversity and equitability were also recovered until reaching similar index values to those of the untreated microcosms. However, changes in fungal taxonomical groups were detected, with Eurotiales (93.4%) being replaced by Microascales (57.9%) and Sordariales (32.8%) at the end of the treatment. Our results suggest that inputs of easily assimilable organic matter in oily sludge might accelerate changes and replacement of fungal taxa, also affecting microbial colonization and, consequently, pollutant removal. These findings highlight the relevance of incorporating fungal dynamics into bioremediation strategies as a complementary approach to oily sludge treatment.
许多研究已经解决了细菌群落在响应修复策略时的动态变化,而真菌群落尽管具有作为生物修复剂的潜力,但研究相对较少。本研究的目的是评价小麦秸秆改良剂(WSA)对未经处理和过硫酸铵处理的含油污泥60天后对本地真菌群的影响。18S rRNA扩增子测序、微生物酶活性和化学参数分析。预处理60天后,WSA对预氧化含油污泥的总石油烃(TPH)去除率较高,漆酶活性最高。真菌多样性和公平性也得到了恢复,直到达到与未处理微生物相似的指数值。然而,真菌分类类群发生了变化,在处理结束时,Eurotiales(93.4%)被Microascales(57.9%)和Sordariales(32.8%)所取代。我们的研究结果表明,含油污泥中易于同化的有机物的输入可能加速真菌分类群的变化和替换,也影响微生物的定植,从而影响污染物的去除。这些发现强调了将真菌动力学纳入生物修复策略作为含油污泥处理的补充方法的相关性。
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引用次数: 0
Genetic resistance to infectious diseases: A complementary tool to antimicrobial drugs in livestock? 对传染病的遗传抗性:家畜抗微生物药物的补充工具?
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-01 DOI: 10.1016/j.ram.2025.06.001
Carlos A. Rossetti , Ursula A. Rossi
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引用次数: 0
Reporte de una experiencia de control del virus de la diarrea viral bovina en 2 tambos de Argentina aplicando herramientas de manejo, diagnóstico y vacunación [阿根廷2个奶牛场应用管理、诊断和疫苗接种工具对牛病毒性腹泻病毒的现场控制经验报告]。
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-01 DOI: 10.1016/j.ram.2024.12.001
Rodrigo Pereyra , Fernando Martino , Mariángeles Castillo , Juan Manuel Sala , Lucas José Barone , Claudio Paolazzi , Alejandra Victoria Capozzo
Bovine viral diarrhea virus (BVDV) causes significant economic losses in the international livestock industry and in Argentina, where it circulates at high prevalence. Under high prevalence conditions, BVDV infections are controlled through vaccination once persistently infected animals are identified and segregated. This study evaluated the feasibility of controlling BVDV circulation under field conditions by combining diagnosis, management measures, and vaccination in 2 dairy farms in the province of Santa Fe. Commercial ELISAs were used for the detection of the NS3 (P80) protein or antibodies against this protein as well as an RT-nested PCR for the detection of the viral genome, and viral seroneutralization to assess vaccine efficacy. The average seroprevalence of the farms was 58.4%, with a persistently infected animal rate of 2.4%. After segregating the persistently infected animals and vaccinating them with a commercial combined vaccine containing inactivated BVDV, abortion rates significantly decreased (p < 0.05) in farm 1 (from 20.5 to 11.6%) and in farm 2 (from 34 to 23.4%) during the second year of the control strategy. Conception rates increased from 29 to 33% in farm 1 during the first year, while in farm 2, the increase was 7 points during the second year. This methodology achieved conditions in which BVDV ceased to circulate, constituting the first controlled report on BVDV management in dairy farms using tools available to producers in Argentina.
牛病毒性腹泻病毒(BVDV)在国际畜牧业和阿根廷造成重大经济损失,该病毒在阿根廷的流行率很高。在高流行情况下,一旦发现并隔离持续感染的动物,就可以通过接种疫苗来控制BVDV感染。本研究对圣达菲省2个奶牛场采用诊断、管理和疫苗接种相结合的方法,在田间条件下控制BVDV传播的可行性进行了评价。采用商业elisa检测NS3 (P80)蛋白或针对该蛋白的抗体,rt -巢式PCR检测病毒基因组,并进行病毒血清中和以评估疫苗效力。养殖场平均血清阳性率为58.4%,持续感染动物率为2.4%。分离出持续感染的动物,并给它们接种含有灭活BVDV的商业联合疫苗后,流产率显著降低(p
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引用次数: 0
Clinical and demographic characteristics of spondylodiscitis in a Mexican population: A retrospective study 墨西哥人群脊柱炎的临床和人口学特征:一项回顾性研究。
IF 1.8 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2025-07-01 DOI: 10.1016/j.ram.2025.01.002
Mario Alberto Dueñas-Espinosa , Julio César López-Valdés , Daniel Alejandro Vega-Moreno , María Fernanda Guzmán-del Río , Rafael Sánchez-Mata , María Elena Córdoba-Mosqueda , Laura Mestre-Orozco , Erick Alberto Castañeda-Ramírez , Alejandro Jacob Madrid-Sánchez , Ulises García-González
The aim of this study was to identify the clinical and demographic characteristics of patients with a confirmed diagnosis of spondylodiscitis through microbiological cultures. A descriptive, observational, and retrospective study was conducted. Patients were included based on clinical and radiological evidence of vertebral infection, unspecified discitis, and/or positive microbiological cultures consistent with spondylodiscitis. For the comparison between men and women, the Student's t-test and odds ratio were employed. The Chi-square test was used to examine correlations between affected spinal levels, isolated microorganisms, and associated comorbidities. A total of 86 cases of discitis were identified, 65% of which involved male patients. The mean age was 59.0 ± 11.5 years (range: 38–83), and the average body mass index (BMI) was 28 ± 4.05 kg/m2. Primary discitis predominated in 68% of cases, mainly at the thoracic level. Seventeen patients presented with spondylodiscitis not associated with chronic degenerative diseases. The most frequently isolated microorganisms were Staphylococcus aureus (28 cases) and Escherichia coli (21 cases). In 16 cases, intracellular pathogens such as Mycobacterium tuberculosis and Brucella spp. were identified, leading to an average hospital stay of 30 days. Spondylodiscitis is a serious complication, and this study highlights differences from previously published data, particularly in terms of the microorganisms involved and the demographic profile of the population.
本研究的目的是通过微生物培养确定确诊为脊椎椎间盘炎的患者的临床和人口学特征。进行了一项描述性、观察性和回顾性研究。纳入患者的依据是椎体感染、未明确的椎间盘炎和/或与椎间盘炎一致的微生物培养阳性的临床和影像学证据。对于男女之间的比较,采用了学生t检验和优势比。卡方检验用于检查受影响的脊柱水平、分离的微生物和相关合并症之间的相关性。共发现86例椎间盘炎,65%为男性患者。平均年龄59.0±11.5岁(范围38 ~ 83岁),平均体重指数(BMI) 28±4.05kg/m2。68%的病例以原发性椎间盘炎为主,主要发生在胸部。17例患者表现为与慢性退行性疾病无关的脊椎椎间盘炎。最常见的分离微生物是金黄色葡萄球菌(28例)和大肠杆菌(21例)。在16例中,发现了细胞内病原体,如结核分枝杆菌和布鲁氏菌,导致平均住院30天。脊柱炎是一种严重的并发症,这项研究强调了与以前发表的数据的差异,特别是在涉及的微生物和人口统计资料方面。
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引用次数: 0
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Revista Argentina de microbiologia
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