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Editorial: Solid-state NMR and DNP of heterogeneous biomaterials and cellular systems 非均质生物材料和细胞系统的固态核磁共振和DNP
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2025-03-21 DOI: 10.1016/j.ssnmr.2025.102003
Patrick C.A. van der Wel , Tuo Wang
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引用次数: 0
Solid-state NMR observation of chitin in whole cells by indirect 15N detection with NC, NCC, CNC and CNCC polarization transfers 用NC、NCC、CNC和CNCC极化转移间接15N检测全细胞甲壳素的固态核磁共振观察
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2025-03-14 DOI: 10.1016/j.ssnmr.2025.102002
Loic Delcourte , Mélanie Berbon , Marion Rodriguez , Laurence Delhaes , Birgit Habenstein , Antoine Loquet
Chitin is the most important nitrogen-containing polysaccharide found on Earth. This polysaccharide is a polymer of an N-acetylglucosamine and it is a crucial structural component of fungal cell walls and crustaceans. Magic-angle spinning solid-state NMR is emerging as a powerful analytical approach to study polysaccharides in the context of intact cell walls and whole cells. The presence of an acetamido group in chitin is attractive for 15N solid-state NMR. Here we investigate the use of various multi-step polarization transfer experiments incorporating indirect 15N detection at moderate spinning frequency, adapted from pulse sequences commonly employed for residue resonance assignment in biosolid proteins. The 13C,15N chitin spin topology slightly differs from amino acids, and we discussed the use of frequency-selective 15N-13C cross-polarization transfers followed by broadband or frequency-selective homonuclear 13C–13C transfers to detect chitin resonances. Demonstrated here for chitin found in the cell wall of the fungus Aspergillus fumigatus, the use of indirect 15N detection through multi-step polarization transfers could be advantageous to investigate more complex nitrogen-containing polysaccharides found in whole cells and peptidoglycan samples.
几丁质是地球上发现的最重要的含氮多糖。这种多糖是一种n -乙酰氨基葡萄糖的聚合物,是真菌细胞壁和甲壳类动物的重要结构成分。魔角旋转固体核磁共振正在成为一种强大的分析方法,在完整细胞壁和整个细胞的背景下研究多糖。甲壳素中乙酰氨基的存在对15N固态核磁共振是有吸引力的。在这里,我们研究了不同的多步极化转移实验,包括在中等旋转频率下间接检测15N,适应于生物固体蛋白质中常用的残基共振分配的脉冲序列。13C,15N几丁质自旋拓扑结构与氨基酸略有不同,我们讨论了使用频率选择性的15N-13C交叉极化转移,然后是宽带或频率选择性的同核13C -13C转移来检测几丁质共振。对于烟曲霉细胞壁中发现的几丁质,通过多步极化转移的间接15N检测可能有利于研究在全细胞和肽聚糖样品中发现的更复杂的含氮多糖。
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引用次数: 0
Highly sensitive measurements of methylene dynamics with a frequency-selective double-quantum sideband method 用频率选择性双量子边带方法高灵敏度测量亚甲基动力学
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2025-02-21 DOI: 10.1016/j.ssnmr.2025.101994
Jacob Mayer , Frédéric A. Perras
Probing the fast dynamics of surface sites using NMR spectroscopy is highly challenging owing to the sites' high dilution and the difficulties often associated with isotopic enrichment. Intra-CH2 1H–1H dipolar couplings are ideal probes of motions given that they only involve 1H's and the tensor has a well-defined size and orientation. We introduce a frequency-selective variant of the double-quantum sideband method to measure like-spin 1H–1H dipolar coupling constants. The experiment dramatically reduces the instrument time required to measure dynamically-averaged intra-CH2 dipolar couplings. We demonstrate the performance of the sequence using silica-supported silanes as model highly-mobile surface species.
利用核磁共振光谱探测表面位点的快速动力学是极具挑战性的,因为这些位点的高度稀释和往往与同位素富集相关的困难。ch2内1H - 1H偶极耦合是运动的理想探针,因为它们只涉及1H,而且张量具有明确的大小和方向。我们引入了双量子边带方法的频率选择变体来测量类自旋1H-1H偶极耦合常数。该实验极大地减少了测量动态平均ch2内偶极耦合所需的仪器时间。我们用二氧化硅支撑的硅烷作为模型高流动性表面物种来证明该序列的性能。
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引用次数: 0
Deuteron-proton isotope correlation spectroscopy at high magnetic fields 强磁场下氘核-质子同位素相关光谱
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2025-02-04 DOI: 10.1016/j.ssnmr.2025.101993
Neethu Thomas , Claire Welton , Tomasz Pawlak , Parth Raval , Julien Trébosc , Sheetal K. Jain , G.N. Manjunatha Reddy
A cross-polarization 2H–1H isotope correlation spectroscopy (CP-iCOSY) approach is presented for characterizing a deuterated amino acid, pharmaceutical compound and a solid formulation. This can be achieved by isotopic enrichment in conjunction with high magnetic field (28.2 T) and fast magic-angle spinning (MAS), enabling the rapid detection of 2H NMR spectra in a few seconds to minutes. Specifically, two-dimensional (2D) 2H–1H CP-iCOSY experiment allows the local structures and through-space interactions in a partially deuterated compounds to be elucidated. In doing so, we compare conventional spin-lock and rotor-echo-short-pulse-irradiation RESPIRATIONCP sequences for acquiring 2D 1H–2H correlation spectra. The RESPIRATIONCP sequence allows the detection of 2D peaks at lower CP contact times (0.1–1 ms) than the conventional CP (0.2–4 ms) sequence. Analysis of partially deuterated L-histidine·HCl·H2O and dopamine.HCl is presented, in which the detection of 2D peaks corresponding to 2H–1H pairs separated by greater than 4 Å distance demonstrates the potential of the presented approach for the characterization of packing interactions. These results are corroborated by NMR crystallography analysis using the Gauge-Including Projector Augmented-Wave (GIPAW) approach.
提出了一种交叉极化2H-1H同位素相关光谱(CP-iCOSY)方法,用于表征氘化氨基酸、药物化合物和固体制剂。这可以通过与高磁场(28.2 T)和快速魔角旋转(MAS)相结合的同位素富集来实现,从而在几秒到几分钟内快速检测2H核磁共振光谱。具体来说,二维(2D) 2H-1H CP-iCOSY实验可以阐明部分氘化化合物的局部结构和通过空间的相互作用。在此过程中,我们比较了传统的自旋锁定和转子回波短脉冲辐照呼吸器cp序列,以获得二维1H-2H相关光谱。与传统的CP (0.2-4 ms)序列相比,呼吸器CP序列可以在较低的CP接触时间(0.1-1 ms)下检测2D峰。部分氘化l -组氨酸·HCl·H2O和多巴胺的分析。提出了HCl,其中检测到的2D峰对应于间隔大于4 Å距离的2H-1H对,表明了所提出的方法表征包装相互作用的潜力。这些结果证实了核磁共振晶体学分析使用仪表-包括投影仪增强波(GIPAW)方法。
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引用次数: 0
Optimal control: From sensitivity improvement to alternative pulse-sequence design in solid-state NMR 最优控制:从灵敏度改进到固体核磁共振脉冲序列设计。
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2025-02-01 DOI: 10.1016/j.ssnmr.2024.101984
Jan Blahut , Zdeněk Tošner
Exciting developments in new experimental methods for multidimensional solid-state NMR spectroscopy have recently been achieved using optimal-control theory. These results, in turn, have triggered the development of new pulse sequences based on traditional analytical theories. This trend article summarises the key steps leading to these advancements. It also describes additional applications of optimal control beyond structural biology and envisions similar progress in the NMR of solid materials. Despite attractive features of optimal-control pulse sequences demonstrated in the proof-of-concept studies, their experimental utilization remains sparse, probably due to the lack of awareness among experimentalists. We hope this mini-review helps to spread optimal-control methods into routine experimental workflows. Furthermore, we offer a personal outlook on how numerical optimisations could in general enhance the experimental capabilities of solid-state NMR in the near future, with optimal control serving as a pioneer exploring new possibilities.
利用最优控制理论,在多维固态核磁共振波谱的新实验方法上取得了令人兴奋的进展。这些结果反过来又引发了基于传统分析理论的新脉冲序列的发展。这篇趋势文章总结了导致这些进步的关键步骤。它还描述了结构生物学之外的最优控制的其他应用,并展望了固体材料核磁共振的类似进展。尽管在概念验证研究中证明了最优控制脉冲序列具有吸引人的特征,但它们的实验利用仍然很少,可能是由于实验工作者缺乏意识。我们希望这篇小综述有助于将最优控制方法推广到常规的实验工作流程中。此外,我们对数值优化如何在不久的将来总体上增强固态核磁共振的实验能力提供了个人看法,最优控制作为探索新可能性的先驱。
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引用次数: 0
Spin-dynamics and efficiency of single 14N-1H cross-polarization at fast magic angle spinning in solids 固体中快速魔角自旋下单14N-1H交叉极化的自旋动力学和效率
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2025-01-28 DOI: 10.1016/j.ssnmr.2025.101992
Vipin Agarwal , Sreejith Raran-Kurussi , Yusuke Nishiyama
The naturally abundant 14N isotope (>99 %) is sparingly employed for characterization in solid-state nuclear magnetic resonance (NMR) despite the importance of nitrogen atoms in shaping molecular structures and properties. This inhibition can be attributed to large quadrupolar couplings (∼several MHz), resulting in more involved spin methodologies for 14N nuclei. Experimentally, spin-½ nuclei are utilized for excitation and detection through two-way (1H→14N→1H) polarization transfer between spin-½ nuclei and 14N. Herein, we show direct 14N spin excitation followed by 14N→1H cross-polarization (CP) is an efficient method for polarization transfer even for 14N spins with a large quadrupolar coupling constant (3–4 MHz). This contrasts previous studies, which indicate that 1H-14N spectra can only be observed with a pair of at least a rotor period-long symmetric 14N pulses (J. Chem. Phys. 151 (2019) 154202). The 14N→1H CP spin dynamics have been experimentally established and can be explained in analogy to spin-½ Hartmann-Hahn CP if visualized in the quadrupolar jolting frame. The 14N→1H CP is ∼1.9–2.7 times more efficient in polarization transfer than other 14N edited experiments. Considering shorter 14N T1 relaxation times compared to protons, 14N edited spectra were recorded using 14N→1H CP, resulting in enhanced sensitivity per unit of time.
天然丰富的14N同位素(> 99%)很少用于固态核磁共振(NMR)表征,尽管氮原子在塑造分子结构和性质方面很重要。这种抑制可以归因于大的四极耦合(~几MHz),导致14N核的自旋方法更复杂。实验中,利用自旋1 / 2原子核与14N之间的双向(1H→14N→1H)极化转移,利用自旋1 / 2原子核进行激发和探测。本研究表明,直接14N自旋激发后进行14N→1H交叉极化(CP)是一种有效的极化转移方法,即使对于具有较大四极耦合常数(3-4 MHz)的14N自旋也是如此。这与先前的研究形成了对比,这些研究表明,只有用一对至少一个转子周期长的对称14N脉冲才能观察到1H-14N光谱(J. Chem。物理学报,151(2019):154202)。在实验中建立了14N→1H CP的自旋动力学,如果在四极振动框架中可视化,可以用自旋- 1 / 2 Hartmann-Hahn CP的类比来解释。14N→1H CP的极化转移效率是其他14N编辑实验的1.9 ~ 2.7倍。考虑到与质子相比,14N T1弛豫时间更短,使用14N→1H CP记录14N编辑光谱,从而提高了单位时间的灵敏度。
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引用次数: 0
Applications of NMR based methodologies investigating the behavior of lignin and cellulose towards bio-based carbon fibers production 应用基于核磁共振的方法研究木质素和纤维素在生物基碳纤维生产中的行为
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2024-11-21 DOI: 10.1016/j.ssnmr.2024.101977
Feryal Guerroudj , Lukas Fliri , Jenny Bengtsson , Leandro Cid Gomes , Tristan Gazzola , Michael Hummel , Diana Bernin
Cellulose–lignin blends are proposed as alternative precursors for carbon fiber (CF) production, offering a potential sustainable and cost-effective alternative to the expensive fossil-based polymers currently used. The characteristics of the precursor fibers including their crystallinity, the incorporated chemical structures and the distribution of the biopolymers have a significant influence on their carbonization behavior and the properties of the CFs. They are partly determined by the composition of the bio-based resources and the conditions used during the fiber fixation, i.e. the coagulation, an important processing step. In this work, 13C solid and 2D solution NMR methodologies were applied to investigate the impact of coagulation and thermostabilization conditions on cellulose and cellulose-lignin blends using a thin film model. Solid state NMR spectroscopy showed that the choice of the anti-solvent influenced the proportion of cellulose II versus amorphous regions in the coagulated films. Independent of the presence of lignin, the choice of anti-solvent seems to impact the rate of thermal reactions. After thermostabilization at 245 °C, the samples were investigated using a solution NMR protocol devised for cellulosic materials. At 275 °C, most of the samples became insoluble for solution NMR. However, solid state NMR revealed further changes in the chemical composition, which were dependent on both the presence of lignin and the choice of anti-solvent. This multi-faceted approach combining solid state and 2D solution NMR techniques provides a comprehensive understanding of the cellulose structure and the products formed for cellulose-lignin-based CFs, which is crucial for optimizing their properties and potential applications.
纤维素-木质素混合物被提议作为碳纤维(CF)生产的替代前体,为目前使用的昂贵化石基聚合物提供了一种潜在的可持续且具有成本效益的替代品。前体纤维的特性,包括其结晶度、结合的化学结构和生物聚合物的分布,对其碳化行为和碳纤维的特性有重大影响。它们在一定程度上取决于生物基资源的成分以及纤维固定(即凝固)过程中使用的条件,凝固是一个重要的加工步骤。在这项工作中,采用了 13C 固态和二维溶液 NMR 方法,利用薄膜模型研究了凝固和热稳定条件对纤维素和纤维素-木质素混合物的影响。固态核磁共振光谱显示,反溶剂的选择会影响凝固薄膜中纤维素 II 与无定形区域的比例。与木质素的存在无关,反溶剂的选择似乎会影响热反应的速度。在 245 °C 下进行热稳定后,使用针对纤维素材料设计的溶液 NMR 方案对样品进行了研究。在 275 °C 时,大多数样品变得不溶于溶液 NMR。然而,固态 NMR 揭示了化学成分的进一步变化,这些变化取决于木质素的存在和反溶剂的选择。这种将固态和二维溶液 NMR 技术相结合的多层面方法提供了对纤维素结构以及纤维素-木质素基 CF 所形成产物的全面了解,这对于优化其性能和潜在应用至关重要。
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引用次数: 0
17O NMR relaxation measurements for investigation of molecular dynamics in static solids using sodium nitrate as a model compound 以硝酸钠为模型化合物进行 17O NMR 驰豫测量以研究静态固体中的分子动力学
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2024-11-20 DOI: 10.1016/j.ssnmr.2024.101976
Liliya Vugmeyster , Riqiang Fu , Dmitry Ostrovsky
17O NMR methods are emerging as a powerful tool for determination of structure and dynamics in materials and biological solids. We present experimental and theoretical frameworks for measurements of 17O NMR relaxation times in static solids focusing on the excitation of the central transition of the 17O spin 5/2 system. We employ 17O-enriched NaNO3 as a model compound, in which the nitrate oxygen atoms undergo 3-fold jumps. Rotating frame (T1ρ), transverse (T2) and longitudinal (T1) relaxation times as well as line shapes were measured for the central transition in the 280 to 195 K temperature range at 14.1 and 18.8 T field strengths. We conduct experimental and theoretical comparison between different relaxation methods and demonstrate the advantage of combining data from multiple relaxation time and line shape measurements to obtain a more accurate determination of the dynamics as compared to either of the techniques alone. The computational framework for relaxation of spin 5/2 nuclei is developed using the numerical integration of the Liouville − von Neumann equation.
17O NMR 方法正在成为确定材料和生物固体结构和动力学的有力工具。我们介绍了测量静态固体中 17O NMR 驰豫时间的实验和理论框架,重点是 17O 自旋 5/2 系统中心跃迁的激发。我们以富含 17O 的 NaNO3 为模型化合物,其中的硝酸氧原子发生了 3 次跃迁。在 14.1 和 18.8 T 场强下,测量了 280 至 195 K 温度范围内中心转变的旋转框架 (T1ρ)、横向 (T2) 和纵向 (T1) 弛豫时间以及线形。我们对不同的弛豫方法进行了实验和理论比较,并证明了将多种弛豫时间和线形测量数据结合起来的优势,从而获得比单独使用其中一种技术更精确的动力学测定结果。自旋 5/2 原子核弛豫的计算框架是利用柳维尔-冯-诺依曼方程的数值积分建立的。
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引用次数: 0
Solid-state NMR compositional analysis of sputum from people with cystic fibrosis 囊性纤维化患者痰液的固态核磁共振成分分析。
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2024-10-25 DOI: 10.1016/j.ssnmr.2024.101975
Kathy Duong , Evan Moss , Courtney Reichhardt
People with the genetic disease cystic fibrosis (CF) often have chronic airway infections and produce airway secretions called sputum. A better understanding of sputum composition is desired in order to track changes in response to CF therapeutics and to improve laboratory models for the study of CF airway infections. The glycosylated protein mucin is a primary component. Along with extracellular DNA, mucin gives rise to the high viscoelasticity of sputum, which inhibits airway clearance and is thought to promote chronic airway infections in people with CF. Past studies of sputum composition identified additional biomolecular components of sputum including other proteins, both glycosylated and not glycosylated, free amino acids, and lipids. Typically, studies of sputum, as well as other complex biological materials, have focused on soluble or isolated components. Solid-state NMR is not limited to the study of soluble components. Instead, it can provide molecular-level information about insoluble biological samples. Additionally, solid-state NMR can provide information about sample composition without requiring any processing of the sample, eliminating the possibility of misestimating certain components due to insolubility or potential sample loss in isolation steps. In this study, we used both 13C and 31P CPMAS to investigate the total composition of sputum samples obtained from six people with CF. We compared these spectra to those of commercially available mucin, DNA, and phospholipid samples. Lastly, we performed complementary biochemical analyses to identify specific proteins present in the sputum samples. Overall, our findings provide insight into the composition of unprocessed sputum samples from people with CF, which can be used as a benchmark for future investigations of CF and infections in the airways of people with CF. Further, this study provides opportunities to expand the solid-state NMR approach to include dynamic nuclear polarization (DNP) to obtain high-resolution information of sputum and similar biological samples that are not feasible to isotopically enrich.
患有遗传性疾病囊性纤维化(CF)的人经常会出现慢性气道感染,并产生称为痰的气道分泌物。我们需要更好地了解痰液的成分,以便跟踪对囊性纤维化治疗药物的反应变化,并改进研究囊性纤维化气道感染的实验室模型。糖基化蛋白质粘蛋白是痰液的主要成分。粘蛋白与细胞外 DNA 一起造成了痰液的高粘弹性,从而抑制了气道清除,并被认为促进了 CF 患者的慢性气道感染。过去对痰液成分的研究发现,痰液中还含有其他生物分子成分,包括其他糖基化和非糖基化蛋白质、游离氨基酸和脂质。通常情况下,对痰以及其他复杂生物材料的研究主要集中在可溶性或分离成分上。固态 NMR 并不局限于研究可溶性成分。相反,它可以提供不溶性生物样本的分子级信息。此外,固态 NMR 无需对样品进行任何处理即可提供有关样品成分的信息,从而消除了因样品不溶解或在分离步骤中可能丢失样品而导致对某些成分估计错误的可能性。在本研究中,我们使用 13C 和 31P CPMAS 研究了六名 CF 患者痰样本的总成分。我们将这些光谱与市售粘蛋白、DNA 和磷脂样本的光谱进行了比较。最后,我们还进行了补充生化分析,以确定痰样本中存在的特定蛋白质。总之,我们的研究结果让我们深入了解了 CF 患者未经处理的痰样本的成分,可作为今后研究 CF 和 CF 患者气道感染的基准。此外,这项研究还为扩展固态核磁共振方法提供了机会,使之包括动态核偏振(DNP),从而获得痰和无法进行同位素富集的类似生物样本的高分辨率信息。
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引用次数: 0
Elucidating structure and metabolism of insect biomaterials by solid-state NMR 利用固态核磁共振阐明昆虫生物材料的结构和新陈代谢。
IF 1.8 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2024-10-14 DOI: 10.1016/j.ssnmr.2024.101974
Christine Chrissian , Michael L. Stawski , Andrew P. Williams , Ruth E. Stark
Among the many natural biomaterials for which information on atomic-level structure and reorientational motion can offer essential clues to function, insoluble multi-component composites with limited degrees of order are among the most challenging to study. Despite its limited sensitivity, solid-state NMR (ssNMR) is often the technique of choice to ferret out these details in carbon- and nitrogen-rich materials: this spectroscopic approach can probe many biomaterials in their native or near-native states, either with or without the introduction of stable NMR-active isotopes, or with the assistance of dynamic nuclear polarization technology. During a span of close to four decades, such research targets and ssNMR approaches have been exemplified by insects, a diverse and evolutionarily agile group of organisms with global impacts that include ecology, agriculture, and human disease. In this short review, we present case studies on insect cuticles that range from protective exoskeletons and egg capsules to the wing structures that enable flight and showcase nature's awe-inspiring beauty, highlighting the use of ssNMR spectroscopy to profile chemical composition, elucidate macromolecular architecture, and monitor metabolic development in these fascinating biological assemblies.
在许多天然生物材料中,有关原子级结构和重新定向运动的信息可以提供重要的功能线索,而具有有限有序度的不溶性多组分复合材料则是最具挑战性的研究对象之一。尽管固态核磁共振(ssNMR)的灵敏度有限,但它往往是在富碳和富氮材料中探寻这些细节的首选技术:这种光谱方法可以在引入或不引入稳定核磁共振活性同位素的情况下,或在动态核偏振技术的帮助下,探测许多生物材料的原生态或接近原生态的状态。在近四十年的时间里,昆虫是此类研究目标和 ssNMR 方法的典范,昆虫是一个多样化、进化敏捷的生物群体,对生态学、农业和人类疾病具有全球性影响。在这篇简短的综述中,我们将介绍有关昆虫角质层的案例研究,这些角质层包括保护性外骨骼和卵囊,以及使昆虫能够飞行并展示大自然令人惊叹之美的翅膀结构,重点介绍如何使用ssNMR 光谱分析化学成分、阐明大分子结构,以及监测这些迷人的生物组合体的新陈代谢发展。
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引用次数: 0
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Solid state nuclear magnetic resonance
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