Pub Date : 2023-12-22DOI: 10.1016/j.vibspec.2023.103643
V Arunachalam, Diksha C Salgaonkar, Satvashil S Devidas, Bappa Das
Carbohydrates are essential molecules in the metabolism of plant systems whose quantification is crucial. The study aims to estimate foliar glucose content using the Smartphone-based Color Grab app by color change upon reaction with a 3,5-dinitrosalicylic acid reagent and mid-infrared spectra. The hue showed a negative correlation of -0.959 with glucose content with sensitivity, detection limit and precision of 13.46 μg/mL, 0.035 μg/mL, and 0.229% respectively. The glucose concentration to color coordinates displayed a linear response between 50 to 600 µg/mL. The linear regression equation with hue of standards was used to predict spectrophotometrically measured glucose concentration of leaf extracts with R2 = 0.934 and sensitivity of 13.46 μg/mL. Multivariate analysis of infrared spectrum (650-4000 cm-1) of powdered arecanut leaves indicated elastic net and partial least square regression as the best models with R2 of 0.99. The study has practical implications in smartphone or infrared spectra-based glucose measurements for low glucose (< 1 mg/mL) samples.
{"title":"Estimation of foliar glucose content of areca palm by a smartphone app and Fourier transform infrared spectroscopy based multivariate modeling","authors":"V Arunachalam, Diksha C Salgaonkar, Satvashil S Devidas, Bappa Das","doi":"10.1016/j.vibspec.2023.103643","DOIUrl":"https://doi.org/10.1016/j.vibspec.2023.103643","url":null,"abstract":"<p>Carbohydrates are essential molecules in the metabolism of plant systems whose quantification is crucial. The study aims to estimate foliar glucose content using the Smartphone-based Color Grab app by color change upon reaction with a 3,5-dinitrosalicylic acid reagent and mid-infrared spectra. The hue showed a negative correlation of -0.959 with glucose content with sensitivity, detection limit and precision of 13.46<!-- --> <!-- -->μg/mL, 0.035<!-- --> <!-- -->μg/mL, and 0.229% respectively. The glucose concentration to color coordinates displayed a linear response between 50 to 600<!-- --> <!-- -->µg/mL. The linear regression equation with hue of standards was used to predict spectrophotometrically measured glucose concentration of leaf extracts with R<sup>2</sup> = 0.934 and sensitivity of 13.46<!-- --> <!-- -->μg/mL. Multivariate analysis of infrared spectrum (650-4000<!-- --> <!-- -->cm<sup>-1</sup>) of powdered arecanut leaves indicated elastic net and partial least square regression as the best models with R<sup>2</sup> of 0.99. The study has practical implications in smartphone or infrared spectra-based glucose measurements for low glucose (< 1<!-- --> <!-- -->mg/mL) samples.</p>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"7 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2023-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139029660","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-12-22DOI: 10.1016/j.vibspec.2023.103645
Chenlu Wu, Yanqing Xie, Qiang Xi, Xiangli Han, Zheng Li, Gang Li, Jing Zhao, Ming Liu
Rapid identification of the active state of foodborne bacteria is crucial for ensuring the safety and quality control of food or pharmaceutical products. In this study, a combination of hyperspectral microscope imaging (HMI) and machine learning algorithm is employed for the identification of active state of Escherichia coli (E. coli). Hyperspectral microscope images of live, 100℃ heat inactivation and 121℃ high-pressure inactivation of E. coli are collected in wavelength range of 370-1060 nm. Savitzky-Golay (SG) smoothing combing with normalization is used for spectra preprocessing. And principal component analysis (PCA) is employed for spectral dimension reduction. Four different regions of interest (ROIs), including the entire bacterial cell ROI (cell), the outer cell wall ROI (cell_r), the membrane structure ROI (cell_w) formed by the cell wall and cell membrane, and the central of the cell ROI (cell_cy), are extracted and used as model input variables to investigate the influence on the modeling results. Five model algorithms, support vector machines (SVM), random forests (RF), k-nearest neighbors (KNN) algorithms, discriminant analysis (DA) classifiers, and long short-term memory (LSTM) neural networks are used and compared. Modeling results with spectral data of cell_r perform better than those with other ROIs. Accuracy of the models with data of the cell_r ROI are as follows: 79.78% for SVM, 95.11% for RF, 91.33% for KNN, 98.22% for DA, and 93.78% for LSTM. DA achieves the highest classification accuracy. The results show that high-temperature inactivation induces changes in bacterial tissue and morphology, resulting in certain spectral differences among bacteria in three different states. The combination of hyperspectral microscope imaging and machine learning algorithm can provide an effective method for identification of active and inactive states of E. coli. Furthermore, the model, constructed with the data of cell_r ROI, exhibits the best performance in identification.
快速识别食源性细菌的活性状态对于确保食品或药品的安全和质量控制至关重要。本研究采用高光谱显微成像(HMI)和机器学习算法相结合的方法来识别大肠杆菌(E. coli)的活性状态。在 370-1060 nm 波长范围内采集活体、100℃ 热灭活和 121℃高压灭活大肠杆菌的高光谱显微镜图像。萨维茨基-戈莱(SG)平滑梳理和归一化用于光谱预处理。主成分分析(PCA)用于降低光谱维度。提取四个不同的感兴趣区(ROI),包括整个细菌细胞感兴趣区(cell)、细胞外壁感兴趣区(cell_r)、由细胞壁和细胞膜形成的膜结构感兴趣区(cell_w)以及细胞中心感兴趣区(cell_cy),并将其作为模型输入变量,以研究其对建模结果的影响。使用了支持向量机(SVM)、随机森林(RF)、k-近邻(KNN)算法、判别分析(DA)分类器和长短期记忆(LSTM)神经网络等五种模型算法,并对其进行了比较。使用 cell_r 光谱数据的建模结果优于使用其他 ROI 的结果。使用 cell_r ROI 数据的模型准确率如下:SVM 为 79.78%,RF 为 95.11%,KNN 为 91.33%,DA 为 98.22%,LSTM 为 93.78%。DA 的分类准确率最高。结果表明,高温灭活会引起细菌组织和形态的变化,导致三种不同状态下的细菌存在一定的光谱差异。高光谱显微成像与机器学习算法的结合可为识别大肠杆菌的活性和非活性状态提供一种有效的方法。此外,利用 cell_r ROI 数据构建的模型在识别方面表现最佳。
{"title":"Rapid and high accurate identification of Escherichia coli active and inactivated state by hyperspectral microscope imaging combing with machine learning algorithm","authors":"Chenlu Wu, Yanqing Xie, Qiang Xi, Xiangli Han, Zheng Li, Gang Li, Jing Zhao, Ming Liu","doi":"10.1016/j.vibspec.2023.103645","DOIUrl":"https://doi.org/10.1016/j.vibspec.2023.103645","url":null,"abstract":"<p>Rapid identification of the active state of foodborne bacteria is crucial for ensuring the safety and quality control of food or pharmaceutical products. In this study, a combination of hyperspectral microscope imaging (HMI) and machine learning algorithm is employed for the identification of active state of Escherichia coli (E. coli). Hyperspectral microscope images of live, 100℃ heat inactivation and 121℃ high-pressure inactivation of E. coli are collected in wavelength range of 370-1060<!-- --> <!-- -->nm. Savitzky-Golay (SG) smoothing combing with normalization is used for spectra preprocessing. And principal component analysis (PCA) is employed for spectral dimension reduction. Four different regions of interest (ROIs), including the entire bacterial cell ROI (cell), the outer cell wall ROI (cell_r), the membrane structure ROI (cell_w) formed by the cell wall and cell membrane, and the central of the cell ROI (cell_cy), are extracted and used as model input variables to investigate the influence on the modeling results. Five model algorithms, support vector machines (SVM), random forests (RF), k-nearest neighbors (KNN) algorithms, discriminant analysis (DA) classifiers, and long short-term memory (LSTM) neural networks are used and compared. Modeling results with spectral data of cell_r perform better than those with other ROIs. Accuracy of the models with data of the cell_r ROI are as follows: 79.78% for SVM, 95.11% for RF, 91.33% for KNN, 98.22% for DA, and 93.78% for LSTM. DA achieves the highest classification accuracy. The results show that high-temperature inactivation induces changes in bacterial tissue and morphology, resulting in certain spectral differences among bacteria in three different states. The combination of hyperspectral microscope imaging and machine learning algorithm can provide an effective method for identification of active and inactive states of E. coli. Furthermore, the model, constructed with the data of cell_r ROI, exhibits the best performance in identification.</p>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2023-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139029721","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
As a routine, lipstick is daily used by females and can easily be transferred to clothes, cups, tissue papers, and other objects. The analysis of lipsticks is a relatively new and exciting field in forensics, helping to identify suspects in criminal cases where lipstick evidence has been left at crime scenes. By matching a specific brand of lipstick to a sample, investigators can positively connect certain individuals to locations or people, helping to aid in their investigation and subsequent proceedings. In this present study, 20 different pink shade lipsticks of the same manufacturer were analyzed using Vacuum FT-IR, and Raman spectroscopy to show a differentiation percentage of 95.8% between the samples. Data analysis using data mining techniques was performed on FT-IR spectra. Principle Component Analysis (PCA) was used as a data mining model for classification purposes, and it was able to distinguish between lipsticks samples based on their FT-IR spectra.
{"title":"Comparative forensic discrimination of pink lipsticks using fourier transform infra-red and Raman spectroscopy","authors":"Rowdha Abdulla Alblooshi , Rashed Humaid Alremeithi , Abdulrahman Hussain Aljannahi , Ayssar Nahlé","doi":"10.1016/j.vibspec.2023.103640","DOIUrl":"10.1016/j.vibspec.2023.103640","url":null,"abstract":"<div><p>As a routine, lipstick is daily used by females and can easily be transferred to clothes, cups, tissue papers, and other objects. The analysis of lipsticks is a relatively new and exciting field in forensics, helping to identify suspects in criminal cases where lipstick evidence has been left at crime scenes. By matching a specific brand of lipstick to a sample, investigators can positively connect certain individuals to locations or people, helping to aid in their investigation and subsequent proceedings. In this present study, 20 different pink shade lipsticks of the same manufacturer were analyzed using Vacuum FT-IR, and Raman spectroscopy to show a differentiation percentage of 95.8% between the samples. Data analysis using data mining techniques was performed on FT-IR spectra. Principle Component Analysis (PCA) was used as a data mining model for classification purposes, and it was able to distinguish between lipsticks samples based on their FT-IR spectra.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103640"},"PeriodicalIF":2.5,"publicationDate":"2023-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001479/pdfft?md5=ab809ff9c0fdcc704367a14ef5d1140e&pid=1-s2.0-S0924203123001479-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138687075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-12-06DOI: 10.1016/j.vibspec.2023.103636
Qunbiao Wu , Jiachao Luo , Haifeng Fang , Defang He , Tao Liang
The recycling of plastics from small household appliances is of great significance in improving the environment and addressing resource shortages, and has gradually become a focus of attention in various countries. Firstly, spectra were collected from samples with different colors, oxidation levels, and flame retardants. It was found that samples with different colors and oxidation levels exhibited different reflectivity, while samples with flame retardants showed smaller absorption peaks. Subsequently, the spectrum was preprocessed and analyzed, and the results showed that the samples collected under different conditions had little effect on plastic classification. Finally, plastic spectral classification was carried out using algorithms such as support vector machine (SVM), backpropagation neural network (BP), k-nearest neighbor (k-NN), partial least squares discriminant analysis (PLS-DA), and linear discriminant analysis (LDA). Overall, the classification accuracy of each algorithm exceeds 92 %, with SVM and PLS-DA having the best classification performance, while K-NN has relatively poor classification performance. In summary, the plastic classification algorithm for small household appliance recycling based on infrared spectroscopy can meet the actual plastic classification needs of plastic recycling plant production lines.
{"title":"Spectral classification analysis of recycling plastics of small household appliances based on infrared spectroscopy","authors":"Qunbiao Wu , Jiachao Luo , Haifeng Fang , Defang He , Tao Liang","doi":"10.1016/j.vibspec.2023.103636","DOIUrl":"10.1016/j.vibspec.2023.103636","url":null,"abstract":"<div><p>The recycling of plastics from small household appliances is of great significance in improving the environment and addressing resource shortages, and has gradually become a focus of attention in various countries. Firstly, spectra were collected from samples with different colors, oxidation levels, and flame retardants. It was found that samples with different colors and oxidation levels exhibited different reflectivity, while samples with flame retardants showed smaller absorption peaks. Subsequently, the spectrum was preprocessed and analyzed, and the results showed that the samples collected under different conditions had little effect on plastic classification. Finally, plastic spectral classification was carried out using algorithms such as support vector machine (SVM), backpropagation neural network (BP), k-nearest neighbor (k-NN), partial least squares discriminant analysis (PLS-DA), and linear discriminant analysis (LDA). Overall, the classification accuracy of each algorithm exceeds 92 %, with SVM and PLS-DA having the best classification performance, while K-NN has relatively poor classification performance. In summary, the plastic classification algorithm for small household appliance recycling based on infrared spectroscopy can meet the actual plastic classification needs of plastic recycling plant production lines.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103636"},"PeriodicalIF":2.5,"publicationDate":"2023-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001431/pdfft?md5=46a82d1d1c635d2477a29d9f92fd64b2&pid=1-s2.0-S0924203123001431-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138545989","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Most of the research on intact fruit spectroscopy is derivative in nature as it primarily showcase application of existing spectroscopy devices which are often proprietary in nature. The regression models developed by researchers to predict physicochemical attributes using spectra remain theoretical due to lack of mechanism to integrate the developed models back into proprietary devices. This poses challenge for commercial adaptation of this technology in commercial food quality supply chain. The present study addresses this research gap by presenting first of its kind innovative approach to classify tomatoes based on lycopene content using chemometrics-machine learning framework driven portable short-wave near infra-red (SWNIR) spectrophotometer developed by integration of open-source hardware (AS7265x multispectral chipset having wavelength range 410–940 nanometre (nm), Arduino Uno microcontroller) and software (R platform), housed in ergonomically designed and 3-dimension printed cabinet ensuring noise-free spectra acquisition. The lycopene content was observed to have strong negative correlation with wavelengths (nm) 485, 560 and 585 at ρ = – 0.65, – 0.70, – 0.70, whereas strong positive correlation with 760 nm at ρ = +0.64. Similar associations were qualitatively observed using principal component analysis. Atypical of literature, feature selection was performed based on analysis of variance and 14 wavelengths which exhibited statistically significant difference with respect to 15-days storage study (p ≤ 0.05) were selected for model development. Chemometrics-machine learning framework was used for development of optimised probabilistic and non-probabilistic models including logistic regression, Linear Discriminant Analysis (LDA), Random Forest (RF), Artificial Neural Networks (ANN) and Support Vector Machine (SVM) models using 10-fold cross validation subjected to 80–20% train-test split of the dataset. In agreement with literature, 500–750 nm wavelength range dominated the classification of lycopene content. Notably, specific wavelengths for logistic regression (560 nm), LDA (730 nm, 645 nm, 560 nm, 535 nm), RF (760 nm, 585 nm, 560 nm, 645 nm), and ANN (585 nm, 560 nm) significantly influenced outcome instances across classifiers. Accuracy obtained from confusion matrix on test dataset was used as performance metric to compare different models. Logistic regression and RF showcased accuracy of 80%, LDA and SVM at 90% while ANN outperformed all models with accuracy of 95%. This study successfully augmented technological advancement in field of spectroscopy for non-invasive quality assessment of fruit. It is recommended to conduct similar studies on other climacteric fruits for wider adoption of this technology.
{"title":"Machine learning driven portable Vis-SWNIR spectrophotometer for non-destructive classification of raw tomatoes based on lycopene content","authors":"Arun Sharma , Ritesh Kumar , Nishant Kumar , Vikas Saxena","doi":"10.1016/j.vibspec.2023.103628","DOIUrl":"https://doi.org/10.1016/j.vibspec.2023.103628","url":null,"abstract":"<div><p>Most of the research on intact fruit spectroscopy is derivative in nature as it primarily showcase application of existing spectroscopy devices which are often proprietary in nature. The regression models developed by researchers to predict physicochemical attributes using spectra remain theoretical due to lack of mechanism to integrate the developed models back into proprietary devices. This poses challenge for commercial adaptation of this technology in commercial food quality supply chain. The present study addresses this research gap by presenting first of its kind innovative approach to classify tomatoes based on lycopene content using chemometrics-machine learning framework driven portable short-wave near infra-red (SWNIR) spectrophotometer developed by integration of open-source hardware (AS7265x multispectral chipset having wavelength range 410–940 nanometre (nm), Arduino Uno microcontroller) and software (R platform), housed in ergonomically designed and 3-dimension printed cabinet ensuring noise-free spectra acquisition. The lycopene content was observed to have strong negative correlation with wavelengths (nm) 485, 560 and 585 at ρ = – 0.65, – 0.70, – 0.70, whereas strong positive correlation with 760 nm at ρ = +0.64. Similar associations were qualitatively observed using principal component analysis. Atypical of literature, feature selection was performed based on analysis of variance and 14 wavelengths which exhibited statistically significant difference with respect to 15-days storage study (p ≤ 0.05) were selected for model development. Chemometrics-machine learning framework was used for development of optimised probabilistic and non-probabilistic models including logistic regression, Linear Discriminant Analysis (LDA), Random Forest (RF), Artificial Neural Networks (ANN) and Support Vector Machine (SVM) models using 10-fold cross validation subjected to 80–20% train-test split of the dataset. In agreement with literature, 500–750 nm wavelength range dominated the classification of lycopene content. Notably, specific wavelengths for logistic regression (560 nm), LDA (730 nm, 645 nm, 560 nm, 535 nm), RF (760 nm, 585 nm, 560 nm, 645 nm), and ANN (585 nm, 560 nm) significantly influenced outcome instances across classifiers. Accuracy obtained from confusion matrix on test dataset was used as performance metric to compare different models. Logistic regression and RF showcased accuracy of 80%, LDA and SVM at 90% while ANN outperformed all models with accuracy of 95%. This study successfully augmented technological advancement in field of spectroscopy for non-invasive quality assessment of fruit. It is recommended to conduct similar studies on other climacteric fruits for wider adoption of this technology.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103628"},"PeriodicalIF":2.5,"publicationDate":"2023-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001352/pdfft?md5=935231dd9459a701dd5ac3a36975cc14&pid=1-s2.0-S0924203123001352-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138490953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-12-01DOI: 10.1016/j.vibspec.2023.103625
Jian Zhou , Baoxi Zhang , Lixiang Gong , Kun Hu , Shiying Yang , Yang Lu
The polymorphism of drugs exists widely in solid chemical drugs. It will affect the physical and chemical properties of drugs, as well as bioavailability. So it is very necessary to establish an quantitative method to improve the quality control level of polymorphic drugs. Attenuated total reflectance-Fourier transform infrared (ATR-FTIR) and Raman spectra have been included in many countries’ pharmacopoeia as the drug polymorph analytical technique, and they have many unique advantages. However, for multiple mixed systems, due to the complexity of optical signals, it is difficult to obtain an ideal content prediction model by classical linear regression, so the application of chemometric methods shows advantages. Pyrazinamide is a typical polymorphism drug, three polymorphic forms (α, δ, γ) were obtained. The model prediction ability of two kinds of spectroscopy combined with three kinds of stoichiometric methods was investigated by orthogonal experiment. On this basis, the influence of different combinations of five data preprocessing methods on improving modeling quality was investigated. In this research, Raman spectra combined with partial least squares (PLS), multiplicative scatter correction (MSC), denoise, median and first derivative at the whole spectral range resulted in a better calibration model. It had a RMSEP of 5.3%, 21.6%, and 20.8% for polymorphs α, δ, and γ, respectively. Several methods were used for preprocessing the spectral data could remove unimportant baseline (offset) interference from samples or to correct scattering effects and emphasize spectral the interesting signals. PLS can derive a few components from the independent variable system. Therefore, it may be an effective method to establish a quantitative model for a multi-polymorphism component mixed system.
{"title":"Quantitative analysis of pyrazinamide polymorphs in ternary mixtures by ATR-FTIR and Raman spectroscopy with multivariate calibration","authors":"Jian Zhou , Baoxi Zhang , Lixiang Gong , Kun Hu , Shiying Yang , Yang Lu","doi":"10.1016/j.vibspec.2023.103625","DOIUrl":"https://doi.org/10.1016/j.vibspec.2023.103625","url":null,"abstract":"<div><p>The polymorphism of drugs exists widely in solid chemical drugs. It will affect the physical and chemical properties of drugs, as well as bioavailability. So it is very necessary to establish an quantitative method to improve the quality control level of polymorphic drugs. Attenuated total reflectance-Fourier transform infrared (ATR-FTIR) and Raman spectra have been included in many countries’ pharmacopoeia as the drug polymorph analytical technique, and they have many unique advantages. However, for multiple mixed systems, due to the complexity of optical signals, it is difficult to obtain an ideal content prediction model by classical linear regression, so the application of chemometric methods shows advantages. Pyrazinamide is a typical polymorphism drug, three polymorphic forms (α, δ, γ) were obtained. The model prediction ability of two kinds of spectroscopy combined with three kinds of stoichiometric methods was investigated by orthogonal experiment. On this basis, the influence of different combinations of five data preprocessing methods on improving modeling quality was investigated. In this research, Raman spectra combined with partial least squares (PLS), multiplicative scatter correction (MSC), denoise, median and first derivative at the whole spectral range resulted in a better calibration model. It had a RMSEP of 5.3%, 21.6%, and 20.8% for polymorphs α, δ, and γ, respectively. Several methods were used for preprocessing the spectral data could remove unimportant baseline (offset) interference from samples or to correct scattering effects and emphasize spectral the interesting signals. PLS can derive a few components from the independent variable system. Therefore, it may be an effective method to establish a quantitative model for a multi-polymorphism component mixed system.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103625"},"PeriodicalIF":2.5,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001327/pdfft?md5=b24417f2b0f01cf1d23085540514250a&pid=1-s2.0-S0924203123001327-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138490956","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-11-30DOI: 10.1016/j.vibspec.2023.103626
Yingjie Fan , Rongrong Xue , Fenghua Chen
Explanation and prediction for the product of trehalose dihydrate dehydration process was realized in this work. β form is the thermodynamic dehydration product of trehalose dihydrate. And α form is the kinetic dehydration product of trehalose dihydrate, which was analyzed by low-frequency Raman spectra, mid-frequency Raman difference spectra and IR difference spectra, and the analysis results confirmed that the crystal structure of trehalose dihydrate and α form are similar. The selective dehydration process from trehalose dihydrate to α form is due to their similar short-range orders. Amorphous trehalose is the uncontrollable dehydration product of trehalose dihydrate due to the collapse of water channels. The dehydration product of trehalose dihydrate by freeze-drying was a mixture of α form and amorphous phase, and the content of amorphous trehalose in the freeze-drying product increases with the decrease of the particle size of dihydrate. Study on the dehydration principle of organic hydrates will guide the preparation, storage and desolvation of drugs and foods.
{"title":"Explanation and prediction for the product of trehalose dihydrate selective dehydration process using mid-frequency Raman difference spectra","authors":"Yingjie Fan , Rongrong Xue , Fenghua Chen","doi":"10.1016/j.vibspec.2023.103626","DOIUrl":"https://doi.org/10.1016/j.vibspec.2023.103626","url":null,"abstract":"<div><p>Explanation and prediction for the product of trehalose dihydrate dehydration process was realized in this work. β form is the thermodynamic dehydration product of trehalose dihydrate. And α form is the kinetic dehydration product of trehalose dihydrate, which was analyzed by low-frequency Raman spectra, mid-frequency Raman difference spectra and IR difference spectra, and the analysis results confirmed that the crystal structure of trehalose dihydrate and α form are similar. The selective dehydration process from trehalose dihydrate to α form is due to their similar short-range orders. Amorphous trehalose is the uncontrollable dehydration product of trehalose dihydrate due to the collapse of water channels. The dehydration product of trehalose dihydrate by freeze-drying was a mixture of α form and amorphous phase, and the content of amorphous trehalose in the freeze-drying product increases with the decrease of the particle size of dihydrate. Study on the dehydration principle of organic hydrates will guide the preparation, storage and desolvation of drugs and foods.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103626"},"PeriodicalIF":2.5,"publicationDate":"2023-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001339/pdfft?md5=e2b020f3fd1fc6f2f07814809930dc0a&pid=1-s2.0-S0924203123001339-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138490955","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-11-30DOI: 10.1016/j.vibspec.2023.103627
Julia Marinzeck de Alcantara Abdala , Fernanda Ricci Lemos , Ritiane Modesto de Almeida , Vamshi Krishna Tippavajhala , Gustavo Carlos da Silva , Lázaro Pinto Medeiros Neto , Priscila Pereira Fávero , Airton Abrahão Martin
Stratum corneum, and epidermis, regions of human skin were analyzed in vivo using confocal Raman spectroscopy to evaluate age-related biochemical and spectral changes. The data consisted of two defined age groups comprising 71 volunteers (27 ± 3 and 55 ± 4 years old). Multivariate statistical analyses were used to interpret and classify the average spectral data for each skin layer. The analyses demonstrated the measurement of two different groups of skin with different ages and revealed the most representative peaks for both the stratum corneum and epidermis. The Amide III and Amide I, both in α-helix conformation, exhibited increased signals in the spectra of the epidermis and stratum corneum of the younger group, and it was observed that an increased crosslinking of keratin filaments with age is a potential contributor to the stiffness increment, which consequently leads to a decrease in the Raman signal in the older group. The opposite occurred for the lipids signal, as changes in the lateral packing of lipids indicate skin ageing and an increase in the Raman signal. The disparity in the means of total natural moisturizing factor, was statistically significant between the two age groups. The statistical results demonstrated the emergence of distinct groups pertaining to the epidermis and stratum corneum, as well as pertaining to group I or II.
{"title":"Noninvasive in vivo application of confocal Raman spectroscopy in identifying age-related biochemical changes in human stratum corneum and epidermis","authors":"Julia Marinzeck de Alcantara Abdala , Fernanda Ricci Lemos , Ritiane Modesto de Almeida , Vamshi Krishna Tippavajhala , Gustavo Carlos da Silva , Lázaro Pinto Medeiros Neto , Priscila Pereira Fávero , Airton Abrahão Martin","doi":"10.1016/j.vibspec.2023.103627","DOIUrl":"10.1016/j.vibspec.2023.103627","url":null,"abstract":"<div><p>Stratum corneum, and epidermis, regions of human skin were analyzed in vivo using confocal Raman spectroscopy to evaluate age-related biochemical and spectral changes. The data consisted of two defined age groups comprising 71 volunteers (27 ± 3 and 55 ± 4 years old). Multivariate statistical analyses were used to interpret and classify the average spectral data for each skin layer. The analyses demonstrated the measurement of two different groups of skin with different ages and revealed the most representative peaks for both the stratum corneum and epidermis. The Amide III and Amide I, both in α-helix conformation, exhibited increased signals in the spectra of the epidermis and stratum corneum of the younger group, and it was observed that an increased crosslinking of keratin filaments with age is a potential contributor to the stiffness increment, which consequently leads to a decrease in the Raman signal in the older group. The opposite occurred for the lipids signal, as changes in the lateral packing of lipids indicate skin ageing and an increase in the Raman signal. The disparity in the means of total natural moisturizing factor, was statistically significant between the two age groups. The statistical results demonstrated the emergence of distinct groups pertaining to the epidermis and stratum corneum, as well as pertaining to group I or II.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103627"},"PeriodicalIF":2.5,"publicationDate":"2023-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001340/pdfft?md5=47595cec3154072bd39c25cd093d930b&pid=1-s2.0-S0924203123001340-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138495919","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-11-29DOI: 10.1016/j.vibspec.2023.103624
Xiaodong Xu, Qianya Liu, Huimin Zhang, Lujia Han, Xian Liu
<div><p>To study the identification mechanism of microplastics in agricultural environmental media by molecular spectroscopy, two typical media, soil and fishmeal, were selected for this study. Three common microplastics, PE, PP, and PS, were used as research objects. Near-infrared (NIR) and mid-infrared (MIR) spectroscopy combined with chemometric methods were used to explore microplastics' identification and analysis effects in different agricultural media and reveal their identification mechanisms. PCA analysis revealed that different soil types would affect the identification results of microplastics. PLS-DA discriminant analysis showed that the accuracy of NIR spectroscopy technology in identifying microplastics in different types of soil decreased in the order of sand > loam > clay. In contrast, the rule of MIR spectroscopy technology was the opposite. The sensitivity and specificity of the three microplastics in the NIR model of sand and the infrared spectroscopy model of fishmeal reached 1.000. NIR spectroscopy technology is suitable for identifying microplastics in soil, while infrared spectroscopy technology is more suitable for identifying microplastics in fish meal. Furthermore, based on the VIP values of each wavelength point in the spectrum, the characteristic bands that have essential contributions to identifying microplastics in soil were screened out. The NIR spectra of 4500–4300 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span>, 4300–3900 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and 7100–5800 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> are the most essential characteristic bands for identifying microplastics in clay, loam, and sand, respectively. The MIR of 3000–2900 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and 700–650 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> were the most essential characteristic bands for identifying microplastics in soils, and the overlap of the characteristic spectra of the three soils reached 59.45%. The NIR spectra of 6050–5600 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span>, 4700–4000 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and the MIR spectra of 2300–1900 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and 800–400 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> are the most essential characteristic bands for the identifying microplastics in fishmeal. This study provides a more suitable technical "solution" for identifying microplastics in environmental media, which is of great significance for improving the accuracy of molecular spectr
{"title":"The research on the molecular spectroscopic recognition mechanism of microplastics in typical agricultural media","authors":"Xiaodong Xu, Qianya Liu, Huimin Zhang, Lujia Han, Xian Liu","doi":"10.1016/j.vibspec.2023.103624","DOIUrl":"10.1016/j.vibspec.2023.103624","url":null,"abstract":"<div><p>To study the identification mechanism of microplastics in agricultural environmental media by molecular spectroscopy, two typical media, soil and fishmeal, were selected for this study. Three common microplastics, PE, PP, and PS, were used as research objects. Near-infrared (NIR) and mid-infrared (MIR) spectroscopy combined with chemometric methods were used to explore microplastics' identification and analysis effects in different agricultural media and reveal their identification mechanisms. PCA analysis revealed that different soil types would affect the identification results of microplastics. PLS-DA discriminant analysis showed that the accuracy of NIR spectroscopy technology in identifying microplastics in different types of soil decreased in the order of sand > loam > clay. In contrast, the rule of MIR spectroscopy technology was the opposite. The sensitivity and specificity of the three microplastics in the NIR model of sand and the infrared spectroscopy model of fishmeal reached 1.000. NIR spectroscopy technology is suitable for identifying microplastics in soil, while infrared spectroscopy technology is more suitable for identifying microplastics in fish meal. Furthermore, based on the VIP values of each wavelength point in the spectrum, the characteristic bands that have essential contributions to identifying microplastics in soil were screened out. The NIR spectra of 4500–4300 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span>, 4300–3900 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and 7100–5800 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> are the most essential characteristic bands for identifying microplastics in clay, loam, and sand, respectively. The MIR of 3000–2900 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and 700–650 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> were the most essential characteristic bands for identifying microplastics in soils, and the overlap of the characteristic spectra of the three soils reached 59.45%. The NIR spectra of 6050–5600 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span>, 4700–4000 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and the MIR spectra of 2300–1900 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> and 800–400 <span><math><msup><mrow><mi>cm</mi></mrow><mrow><mo>−</mo><mn>1</mn></mrow></msup></math></span> are the most essential characteristic bands for the identifying microplastics in fishmeal. This study provides a more suitable technical \"solution\" for identifying microplastics in environmental media, which is of great significance for improving the accuracy of molecular spectr","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"130 ","pages":"Article 103624"},"PeriodicalIF":2.5,"publicationDate":"2023-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203123001315/pdfft?md5=e111c488b73d055eabd044ec74e28d9a&pid=1-s2.0-S0924203123001315-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138495918","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}