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Population genetic diversity of Phytophthora infestans from China as revealed by SSRs and RAPDs 中国疫霉群体遗传多样性的ssr和rapd分析
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209990301
Li Benjin, Lv Xin, Chen Qinghe, Lan Cheng-zhong, Zhao Jian, Qiu Rongzhou, Weng Qiyong
Simple sequence repeats (SSR) and random amplification of polymorphic DNA (RAPD) molecular markers were used to assess the genetic diversity of 80 isolates of Phytophthora infestans in potato (Solanum tuberosum) from Fujian, Heilongjiang, Hebei and Inner Mongolia Provinces in China. Polymorphism was identified by 13 SSR primers and 14 RAPD primers in the isolates of P. infestans in potato. A total of 76 bands were amplified by SSRs, with the percentage of polymorphic bands (PPB) being 78.9% and the similarity coefficient ranging between 0.00 and 0.42. A total of 189 bands were amplified by RAPDs, with the percentage of polymorphic bands being 95.2% and the similarity coefficient ranging between 0.04 and 0.66. Analysis of genetic diversity showed that there exists higher genetic variation in the Fujian population in comparison to the populations of Heilongjiang, Hebei and Inner Mongolia. Nei's genetic identity analysis indicates that the genetic similarity between populations of Heilongjiang and Inner Mongolia is the highest and that between Fujian and Hebei is the lowest. A cluster analysis revealed that isolates from Fujian, in the south of China, are distantly related to those from Heilongjiang, Hebei and Inner Mongolia in the north, and the Fujian population is distributed among more groups than the other three, exhibiting a higher genetic diversity.
采用简单重复序列(SSR)和随机扩增多态性DNA (RAPD)分子标记对福建、黑龙江、河北和内蒙古马铃薯(Solanum tuberosum) 80株马铃薯疫霉(Phytophthora infestans)进行了遗传多样性评价。利用13条SSR引物和14条RAPD引物对马铃薯病原菌分离物进行多态性鉴定。共扩增到76条条带,多态性条带(PPB)占78.9%,相似系数在0.00 ~ 0.42之间。rapd共扩增出189条条带,多态性条带占95.2%,相似系数在0.04 ~ 0.66之间。遗传多样性分析表明,福建居群的遗传变异高于黑龙江、河北和内蒙古居群。Nei遗传同一性分析表明,黑龙江与内蒙古居群遗传相似性最高,福建与河北居群遗传相似性最低。聚类分析结果表明,南方的福建与北方的黑龙江、河北和内蒙古的分离株有较远的亲缘关系,且福建居群分布较多,遗传多样性较高。
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引用次数: 4
Development of AFLP markers linked to stem nematode resistance gene in sweet potato ( Ipomoea batatas (L.) Lam.) 甘薯茎秆线虫抗性基因AFLP标记的开发Lam)。
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209990192
J. Qin, L. Hua, Z. Hong, Wang Yu-ping, Liping Qiang, M. Daifu, X. Yiping, Li Qingchang
Amplified fragment length polymorphism (AFLP) markers linked to the stem nematode resistance gene were developed in sweet potato ( Ipomoea batatas (L.) Lam.). Using bulked segregant analysis (BSA), 800 AFLP primer combinations were screened in the resistant and susceptible bulked DNA from the 186 progeny of an F 1 single-cross population of Xu781 (resistant parent)×Xushu18 (susceptible parent), and 245 of these AFLP primers showed polymorphic bands between resistant and susceptible DNA. Primer combinations detecting polymorphism between the two bulks were used to screen the parents and eight individuals from each of the bulks. The results showed that E2M23 and E33M20 produced a specific band of about 500 bp and 200 bp in length, respectively, in the resistant plants but not in the susceptible plants, suggesting that the markers named E2M23 500 and E33M20 200 linked to a gene for stem nematode resistance. Amplified analysis of the 186 F 1 individuals indicated that the genetic distance between these two markers and the stem nematode resistance gene was 6.9 cM and 11.1 cM, respectively, measured with Mapmaker 3.0. These two AFLP markers were used to identify ten sweet potato varieties planted widely in China and the results were consistent with those of conventional resistance identification, indicating that the two markers can be used in molecular marker-assisted breeding for stem nematode resistance in the sweet potato.
在甘薯(Ipomoea batatas (L.))中建立了茎秆线虫抗性基因的AFLP标记。Lam)。采用块分离分析(BSA)方法,从徐781(抗性亲本)×Xushu18(易感亲本)f1单交群体186个后代中筛选出800个AFLP引物组合,其中245个AFLP引物在抗性和易感DNA之间存在多态性条带。利用检测两批间多态性的引物组合对亲本和各批8个个体进行筛选。结果表明,E2M23和E33M20在抗性植株中分别产生了约500 bp和200 bp的特异条带,而在易感植株中则没有,这表明E2M23 500和E33M20 200与茎线虫抗性基因相关。对186份f1的扩增分析表明,这两个标记与茎线虫抗性基因的遗传距离分别为6.9 cM和11.1 cM。利用这两种AFLP标记对国内广泛种植的10个甘薯品种进行了鉴定,结果与常规的抗性鉴定结果一致,表明这两种AFLP标记可用于甘薯茎线虫抗性的分子标记辅助育种。
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引用次数: 5
Cloning of carnation GA 20-oxidase and the construction of a plant RNAi vector 石竹GA - 20氧化酶的克隆及植物RNAi载体的构建
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209990246
Jin Liang, L. Yun, Sun Zhen-yuan, L. Tianhong
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引用次数: 0
Identification of resistance to corn-borer of transgenic maize inbred lines and hybrids with GFM Cry1A gene. 转GFM Cry1A基因玉米自交系及杂交种对玉米螟的抗性鉴定。
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209002654
Y. Ying, Lin Xiao-hui, Kong Xiang-mei, Jia Zhi-lei, Lin Chun-Jing, L. Cong-cong, Liu Na, Sun Chuan-bo, Li De-pu
Six transgenic maize lines with the fully modified gene GFM Cry1A were obtained and polymerase chain reaction (PCR) analysis of their T 5 generation plants indicated that foreign genes could be stably inherited. Three hybrids (Simi25 Bt , Tongdan24 Bt and Jidan209 Bt ) were created using the transgenic lines and combined with regular maize inbred lines. The results of resistance identification of the transgenic inbred lines and hybrids showed that the difference of resistance among transgenic lines was very significant; there also existed a difference among individuals of the same line and among the three hybrids. Compared with the control inbred line (CK), the average of four transgenic inbred lines in the number of tunnels per stalk, larval tunnel length per plant and length of surviving larvae were decreased by 70%, 80% and 70%, respectively. Enzyme-linked immunosorbent assay (ELISA) testing showed that the average of Bt Cry1A protein expression level for six transgenic inbred lines was 0.16% total protein and the highest expression level was 0.19%. At maturity, compared with the control variety (CK), the larval tunnel length per plant of the three hybrids (Simi25 Bt , Tongdan24 Bt and Jidan209 Bt ) was decreased by 39.97%, 36.20% and 53.83%, respectively, which was a decrease of 43.36% on average. The investigation of agronomic characters showed that there was no significant difference between the improved hybrids and the control in plant height, ear length, row number per ear, kernel number per row and 100-kernels weight. It is thought that the GFM Cry1A gene can be applied to improve resistance to corn-borer, and maize inbred lines with the Bt gene can be directly applied to conventional maize breeding.
获得了6个完全修饰基因GFM Cry1A的转基因玉米品系,并对其t5代植株进行了聚合酶链反应(PCR)分析,结果表明外源基因可以稳定遗传。利用转基因玉米自交系与普通玉米自交系组合,获得了3个杂交品种(simi25bt、同单24bt和吉单209bt)。对转基因自交系和杂交种的抗性鉴定结果表明,转基因系间的抗性差异非常显著;同一品系个体间和三个杂交种间也存在差异。与对照自交系(CK)相比,4个转基因自交系在单茎隧道数、单株幼虫隧道长度和存活幼虫长度上平均分别降低70%、80%和70%。酶联免疫吸附试验(ELISA)检测表明,6个转基因自交系的Cry1A蛋白平均表达量为总蛋白的0.16%,最高表达量为0.19%。成熟期,与对照品种(CK)相比,3个杂交品种(司米25 Bt、同单24 Bt和吉单209 Bt)单株幼虫隧道长度分别减少了39.97%、36.20%和53.83%,平均减少了43.36%。农艺性状调查表明,改良杂交种在株高、穗长、穗行数、行粒数和百粒重等性状上与对照无显著差异。认为GFM Cry1A基因可用于提高玉米对螟虫的抗性,携带Bt基因的玉米自交系可直接应用于常规玉米育种。
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引用次数: 3
Medium selection in tissue culture of japonica rice cultivar Nipponbare and preparation of transgenic plants with an elicitor-coding gene from Magnaporthe grisea 粳稻品种“日本裸”组织培养的培养基选择及稻瘟病病菌激发子编码基因转基因植株的制备
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209002642
Ma Jianjun, Yang Xiu-fen, Zeng Hongmei, Yuan Jing-jing, Qiu De-wen
N6, MS and BN mediums were adopted for tissue culture of Nipponbare (japanica) scutellum, and the effects of the three mediums on the cultrue were compared. Results indicated that, among the three kinds of culture mediums, NB medium worked best in the calli induction and gene transformation and was most suitable for tissue culture of Nipponbare scutellum. Based on this result, elicitor-encoding gene pemG1 from Magnaporthe grisea was introduced into the genome of Nipponbare via Agrobacterium-mediated method. And transgenic rice plants were obtained. The integration, transcription and expression of pemG1 in rice were confirmed by PCR, Northern blot and Western blot, respectively. Genetic analysis showed that the transgenes were segregated normally in the progenies.
采用N6、MS和BN三种培养基对日本鳞茎进行组织培养,比较三种培养基对培养效果的影响。结果表明,在3种培养基中,NB培养基愈伤组织诱导和基因转化效果最好,最适合于玉莲的组织培养。在此基础上,通过农杆菌介导的方法,将稻瘟病菌的激发子编码基因pemG1导入到日本裸子基因组中。获得了转基因水稻植株。通过PCR、Northern blot和Western blot分别证实了pemG1在水稻中的整合、转录和表达。遗传分析表明,转基因在后代中分离正常。
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引用次数: 1
Cloning and eukaryotic expression of olfaction-related Gqα-protein gene in English grain aphid ( Sitobion avenae ) 英国粒蚜嗅觉相关基因gq α-蛋白的克隆及真核表达
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209990180
Fan Jia, Chen Ju-lian, Cheng Dengfa, Sun Jingrui
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引用次数: 1
Cloning and tissue expression of the adiponectin gene in geese. 鹅脂联素基因的克隆及组织表达。
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209990234
GuoQing Xu, Dao-qing Gong, DongSheng Chu, D. Biao, Meng He
{"title":"Cloning and tissue expression of the adiponectin gene in geese.","authors":"GuoQing Xu, Dao-qing Gong, DongSheng Chu, D. Biao, Meng He","doi":"10.1017/S1479236209990234","DOIUrl":"https://doi.org/10.1017/S1479236209990234","url":null,"abstract":"","PeriodicalId":236932,"journal":{"name":"Chinese Journal of Agricultural Biotechnology","volume":"43 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2009-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132003297","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Analysis, gene cloning and expression of two α-amylases from Bacillus cereus 蜡样芽孢杆菌两种α-淀粉酶的分析、基因克隆及表达
Pub Date : 2009-08-01 DOI: 10.1017/S1479236209002538
Zhang Linlin, W. Qi, Liao Rong-xi, Wang Yongjun, Mei Ru-hong
{"title":"Analysis, gene cloning and expression of two α-amylases from Bacillus cereus","authors":"Zhang Linlin, W. Qi, Liao Rong-xi, Wang Yongjun, Mei Ru-hong","doi":"10.1017/S1479236209002538","DOIUrl":"https://doi.org/10.1017/S1479236209002538","url":null,"abstract":"","PeriodicalId":236932,"journal":{"name":"Chinese Journal of Agricultural Biotechnology","volume":"21 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2009-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121753198","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Detection of a quorum sensing signal molecule of Acidovorax avenae subsp. citrulli and its regulation of pathogenicity 一种蚁群感应信号分子的检测。瓜蒌及其对致病性的调节作用
Pub Date : 2009-04-01 DOI: 10.1017/S1479236209002514
C. Tao, Qian Guoliang, Yang Xiao-li, Ma Junyi, Hu Baishi, L. Fengquan
An efficient AHL ( N -acyl-homoserine lactone) bioassay strain, JZA1, of Agrobacterium tumefaciens was used to detect the AHL production from Acidovorax avenae subsp. citrulli [the pathogen causing bacterial fruit blotch (BFB) of melons], and the results showed that A. avenae subsp. citrulli produced a 3-O-C 8 -homoserine (HSL) type signal molecule. Gene aiiA , which could degrade AHL molecules, was transformed into A. avenae subsp. citrulli strain NJF10, creating strain NJF10- aiiA . The AHL production from NJF10- aiiA was significantly reduced compared with wild-type NJF10. Inoculation tests showed that NJF10- aiiA had an obvious reduction of virulence on watermelon fruits. Our finds showed that AHL production by A. avenae subsp. citrulli was related to its pathogenicity. This work might provide a novel way to control BFB by QS (quorum sensing) interference.
采用根癌农杆菌JZA1高效AHL (N -酰基-高丝氨酸内酯)生物测定菌株,测定了根癌农杆菌Acidovorax avenae亚种AHL的产量。瓜类细菌性果斑病(BFB)的病原菌[A. avenae subsp.;瓜氨酸产生3- o - c8 -高丝氨酸(HSL)型信号分子。将可降解AHL分子的基因aiiA转化为A. avenae亚种。菌株NJF10,产生菌株NJF10- aiiA。NJF10- aiiA的AHL产量明显低于野生型NJF10。接种试验表明,NJF10- aiiA对西瓜果实的毒力有明显的降低。结果表明,A. avenae亚孢子产生AHL;瓜氨酸与其致病性有关。本研究为利用群体感应干扰控制BFB提供了一种新的途径。
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引用次数: 11
Characterization and heterologous expression of testosterone-inducible regulator from Comamonas testosteroni in Escherichia coli. 睾酮单胞菌睾酮诱导调节因子在大肠杆菌中的鉴定及异源表达。
Pub Date : 2009-04-01 DOI: 10.1017/S147923620900254X
C. Jian-qiu, A. Yu-fang, Zhou Yifei, P. Da-ren, Xiong Guang-Ming, Guo Yu-chun, Pan Fei, Lin Bing-Hui
The testosterone-inducible regulator ( teiR ) gene was cloned from Comamonas testosteroni chromosomal DNA, and introduced into plasmids pKtac2 (containing a tac promoter) and pK18 to yield plasmids pKtac2- teiR and pK teiR100 . The recombinant plasmids were transformed into competent Escherichia coli HB101 and total protein was extracted to detect the TeiR protein expression level using enzyme-linked immunosorbent assay (ELISA). E. coli transformed by pKtac2- teiR and pK teiR100 produced 6.65 and 5.93 μg/mg of TeiR protein, respectively. Recombinant plasmids were also co-transformed into competent E. coli HB101 with plasmid p6 [containing hsdA gene (3α-HSD/CR, 3α-hydroxysteroid dehydrogenase/carbonyl reductase encoding gene)] to reveal the relationship between 3α-HSD/CR and TeiR by ELISA. The amounts of TeiR protein expressed by E. coli containing pKtac2- teiR and pK teiR100 were 5.94 μg/mg and 5.33 μg/mg, respectively, and these increased up to 6.81 μg/mg and 6.10 μg/mg after inducing with 1 mmol/l isopropyl-β- d -thiogalactoside (IPTG). Interestingly, 3α-HSD/CR protein expression level, after co-transformation with plasmids pKtac2- teiR and p6, was lower than that observed in the co-transformation with pK teiR100 and p6. The first co-transformation induced 1.20 μg/mg 3α-HSD/CR protein and the second 1.71 μg/mg. These values rose to 1.42 and 1.80 μg/mg, respectively, after treatment with 1 mmol/l IPTG. Our results proved that the tac promoter was more efficient than the lacZ promoter and that the teiR gene could act as an activator for hsdA gene expression.
从睾酮单胞菌染色体DNA中克隆睾酮诱导调节因子(teiR)基因,并将其导入质粒pKtac2(含tac启动子)和pK18中,得到质粒pKtac2- teiR和pK teiR100。将重组质粒转化到大肠杆菌HB101中,提取总蛋白,采用酶联免疫吸附法(ELISA)检测TeiR蛋白的表达水平。由pKtac2- teiR和pK teiR100转化的大肠杆菌分别产生6.65和5.93 μg/mg的teiR蛋白。将重组质粒p6[含hsdA基因(3α-HSD/CR, 3α-羟基类固醇脱氢酶/羰基还原酶编码基因)]共转化到大肠杆菌HB101中,通过ELISA检测3α-HSD/CR与TeiR的关系。含有pKtac2- TeiR和pK teiR100的大肠杆菌表达TeiR蛋白的量分别为5.94和5.33 μg/mg,经1 mmol/l异丙基-β- d -硫代半乳糖苷(IPTG)诱导后分别为6.81和6.10 μg/mg。有趣的是,与质粒pKtac2- teiR和p6共转化后,3α-HSD/CR蛋白的表达水平低于与pK teiR100和p6共转化后的表达水平。第一次共转化诱导3α-HSD/CR蛋白1.20 μg/mg,第二次共转化诱导3α-HSD/CR蛋白1.71 μg/mg。经1 mmol/l IPTG处理后,这些数值分别上升至1.42和1.80 μg/mg。我们的研究结果证明,tac启动子比lacZ启动子更有效,并且teiR基因可以作为hsdA基因表达的激活因子。
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引用次数: 1
期刊
Chinese Journal of Agricultural Biotechnology
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