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2010 International Conference on Systems in Medicine and Biology最新文献

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Deposition and characterization of nichrome thin film over PDMS elastomer PDMS弹性体上镍铬薄膜的沉积与表征
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735400
D. Maji, Puneet Manocha, Soumen Das
Nichrome (Ni - Cr 80/20 wt. %) is one of the most widely used thin film material for the development of micro heaters in various applications. Present paper discusses the optimized sputtering conditions required for successful deposition of nichrome thin film and fabrication of microheaters over a biocompatible polymer PDMS, for biomedical application. Various sputtering conditions like the base vacuum, working pressure, sputtering power and time were standardized to obtain crack free nichrome thin film deposition over PDMS and glass surface. Microheaters were fabricated using the conventional photolithography technique and the resulting structures were used to measure temperature coefficient of resistance (TCR) of nichrome. Measured sheet resistance and TCR of the crack free deposited nichrome thin film over PDMS surface were 3.62 Ω/ and 713 ppm/°C respectively.
镍铬合金(Ni - Cr 80/20 wt. %)是开发微型加热器最广泛使用的薄膜材料之一。本文讨论了在生物相容性聚合物PDMS上成功沉积镍铬薄膜和制备微加热器所需的最佳溅射条件。标准化各种溅射条件,如基材真空度、工作压力、溅射功率和时间,以获得PDMS和玻璃表面无裂纹的镍铬薄膜沉积。采用传统的光刻技术制备微加热器,并用其结构测量镍铬合金的电阻温度系数(TCR)。PDMS表面无裂纹沉积镍铬薄膜的片电阻和TCR分别为3.62 Ω/和713 ppm/°C。
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引用次数: 7
Inorganic nanoparticles as antioxidants 无机纳米颗粒作为抗氧化剂
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735333
S. Seal
Reactive oxygen and nitrogen species play a critical role in many degenerative diseases and in aging. Nanomaterials, especially modified fullerenes and cerium oxide nanoparticles, have been shown to effectively protect mammalian cells against damage caused by increased reactive oxygen or nitrogen species, likely through their direct reaction with superoxide radical, since each of these materials has been shown to act as effective superoxide dismutase mimetics in vitro. The redox ability of rare earth oxides (ceria, lanthanides, etc) has been used in a wide range of applications such as three way catalysis, oxygen buffer systems, sensors and corrosion prevention. While these nanostructures have been widely used in many inorganic applications, their role in biology as catalyst is not explored. We have recently utilized nano cerium oxide's potential use in the treatment of disorders caused by the reactive oxygen intermediates (ROI). This presentation will provide a brief overview of the applications of nanoceria in treatment of disorders caused by ROS. The role of size and stability of ceria nanoparticles in toxicity analysis has also been explored. For various practical applications, synthesis of biocompatible and stable suspensions of nanoceria is essential. It was found that the redox kinetics of regenerative ceria nanoparticles can be controlled with the type of medium and their implications in nanobiomedicine is presented.
活性氧和活性氮在许多退行性疾病和衰老中起着关键作用。纳米材料,特别是改性富勒烯和氧化铈纳米颗粒,已经被证明可以有效地保护哺乳动物细胞免受活性氧或活性氮物种增加所造成的损害,可能是通过它们与超氧化物自由基的直接反应,因为这些材料中的每一种都被证明是体外有效的超氧化物歧化酶模拟物。稀土氧化物(铈、镧系元素等)的氧化还原能力已广泛应用于三元催化、氧缓冲系统、传感器和防腐等领域。虽然这些纳米结构在许多无机应用中得到了广泛的应用,但它们在生物学上作为催化剂的作用尚未被探索。我们最近利用纳米氧化铈在治疗由活性氧中间体(ROI)引起的疾病中的潜在用途。本报告将简要介绍纳米二氧化硅在治疗活性氧引起的疾病中的应用。本文还探讨了氧化铈纳米颗粒的大小和稳定性在毒性分析中的作用。在各种实际应用中,合成具有生物相容性和稳定性的纳米二氧化硅悬浮液是必不可少的。研究发现再生氧化铈纳米颗粒的氧化还原动力学可以通过介质的类型来控制,并提出了其在纳米生物医学中的应用。
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引用次数: 0
ECG feature extraction and classification of anteroseptal myocardial infarction and normal subjects using discrete wavelet transform 离散小波变换在心电特征提取与分类中的应用
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735345
Swati Banerjee, M. Mitra
In this paper, a novel methodology, based on discrete wavelet transform (DWT) is developed for extraction of characteristic features from twelve - lead Electrocardiogram recordings. The first step of this method is to denoise the signal using DWT technique. A multiresolution approach along with thresholding is used for the detection of R - Peaks in each cardiac beats. Followed, by this other fiducial points (Q and S) are detected and QRS onset and offset points are identified. Baseline is also detected and heights of R, Q, S waves are calculated. This, algorithm was validated using PTB diagnostic database giving a sensitivity of 99.6% and MITDB Arrhythmia, giving a sensitivity of 99.8%. The QRS vectors are calculated for normal and patients with Anteroseptal MI and a comparative study is presented. Accordingly, it has been found that classification of normal and AS MI is possible by computing the QRS vector. And a simple classification rule is established for this purpose.
本文提出了一种基于离散小波变换(DWT)的十二导联心电图特征提取方法。该方法的第一步是利用小波变换技术对信号进行降噪。多分辨率方法和阈值法用于检测每次心跳的R -峰。然后,检测其他基点(Q和S),并确定QRS起始点和偏移点。检测基线,计算R、Q、S波高度。该算法使用PTB诊断数据库进行验证,灵敏度为99.6%,MITDB心律失常的灵敏度为99.8%。计算了正常人和房间隔心肌梗死患者的QRS载体,并进行了比较研究。因此,我们发现通过计算QRS向量可以对法向和AS MI进行分类。并为此建立了一个简单的分类规则。
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引用次数: 30
Comparison of ANN models to predict LDL level in Diabetes Mellitus type 2 人工神经网络预测2型糖尿病LDL水平的比较
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735410
M. Chakraborty, B. Tudu
Diabetes Mellitus type 2 (T2DM) is the disorder of hormone insulin. Abnormal insulin action increases the free fatty acid pool and favours the formation of low-density lipoprotein cholesterol (LDL-C). Increase in the level of LDL-C causes deposition of plaques in the vascular wall. This is responsible for vascular events like coronary vascular disease, peripheral vascular disease and neuropathies in T2DM patients. So, we need to monitor the levels of lipid profile of patients who are suffering from T2DM for long duration, to prevent them from peripheral as well as coronary vascular diseases. But a major part of the population of our country is below the poverty line and it is difficult for them to afford for the cost required for all these biochemical tests. In this paper, we presented two artificial neural network (ANN) based computational models: (1) back propagation-multilayer perceptron (BP-MLP) and (2) probabilistic neural network (PNN) for comparative study of prediction of LDL-C level. The predicted results were validated with clinical experimental results.
2型糖尿病(T2DM)是一种激素胰岛素紊乱。异常胰岛素作用增加游离脂肪酸池,有利于低密度脂蛋白胆固醇(LDL-C)的形成。LDL-C水平升高导致血管壁斑块沉积。这是导致T2DM患者发生冠状动脉疾病、周围血管疾病和神经病变等血管事件的原因。因此,我们需要长期监测T2DM患者的血脂水平,以防止他们发生外周和冠状动脉血管疾病。但是,我国有很大一部分人口生活在贫困线以下,他们很难负担所有这些生化化验所需的费用。本文提出了两种基于人工神经网络(ANN)的计算模型:(1)反向传播多层感知器(BP-MLP)和(2)概率神经网络(PNN)用于LDL-C水平预测的比较研究。预测结果与临床实验结果相吻合。
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引用次数: 5
Geometry & hemodynamics of arterial stenosis: A clinical and computational study 动脉狭窄的几何与血流动力学:临床与计算研究
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735402
K. Dasgupta, A. Chanda, Abhirup Roy Choudhury, D. Nag
Stenoss is abnormal narrowing of blood vessels. The presence of stenosis in arteries may cause critical flow conditions depending upon their severity, and occurence which may lead to stroke and heart-attack. A clinical study is done on more than 130 patients along with 2D axisymmetric model of the carotid artery for computational study with same shapes for the same degrees of constrictions. The incompressible Navier-Stokes equation has been considered as the governing equation of the fluid flow and it has been solved with varying flow parameters using standard software package COMSOL. The radial velocity profiles at various points of the flow field, the centerline velocity plot and the centerline pressure plots have been obtained for clinical validation.
血管狭窄是指血管异常狭窄。动脉狭窄的存在可能会导致危急的血流状况,这取决于其严重程度,并可能导致中风和心脏病发作。对130多例患者进行了临床研究,并建立了颈动脉二维轴对称模型,对相同形状、相同收缩程度的颈动脉进行计算研究。将不可压缩的Navier-Stokes方程作为流体流动的控制方程,利用COMSOL标准软件包对其进行了变流参数求解。得到了流场各点径向速度分布图、中心线速度分布图和中心线压力分布图,用于临床验证。
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引用次数: 0
Evaluation of p63 expression in Oral Sub-mucous Fibrosis 口腔黏膜下纤维化组织中p63表达的评价
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735365
R. Das, Vikram Venkatraghavan, D. Sheet, C. Chakraborty, A. Ray, J. Chatterjee, M. Pal, R. Paul
Late-diagnosis of malignant potentiality of oral precancers like Oral Sub-mucous Fibrosis (OSF) contributes towards high mortality of oral cancer patients. Current study intends to differentiate Normal Oral Mucosa (NOM) from OSF stages in terms of expression of a prime candidate gene (p63), correlated with epithelial proliferation and maturation, for better assessment of malignant potentiality of the pre-cancer. Fifty three oral biopsies (i.e. 8 NOM, 45 OSF patients with and without dysplasia) were histopathologically evaluated by hematoxylin and eosin, whereas, p63+ nuclei were identified immunohistochemically. The differences in cellular arrangement, especially in epithelial basal layer of diseased epithelium were observed. In respect to p63 expression the percentage of nuclei positive to this molecule and their size were studied. The p63 expression was higher in dysplastic epithelium and distribution of p63+ cells and their nuclear shape features demonstrated remarkable differences between NOM and OSF stages.
口腔黏膜下纤维化(OSF)等口腔癌前病变的恶性潜能的晚期诊断是口腔癌患者高死亡率的原因之一。本研究旨在通过与上皮细胞增殖和成熟相关的主要候选基因(p63)的表达来区分正常口腔黏膜(NOM)和OSF分期,以便更好地评估癌前病变的恶性潜能。用苏木精和伊红对53例口腔活检(即8例NOM, 45例伴有和不伴有发育不良的OSF患者)进行组织病理学评估,而p63+核则用免疫组织化学方法鉴定。观察到病变上皮细胞排列的差异,尤其是上皮基底层。在p63表达方面,研究了该分子阳性核的百分比及其大小。p63在发育异常上皮中表达较高,p63+细胞的分布及其核形态特征在NOM和OSF分期之间存在显著差异。
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引用次数: 5
Genetic basis of HPV mediated cervical cancer in Indian women HPV介导的宫颈癌在印度妇女的遗传基础
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735335
M. Bharadwaj, Showket Hussain, N. Thakur
Cervical cancer is multi-factorial disease comprising both genetic and environmental components. Human papillomavirus is considered to be a major etiological factor for the development of cervical cancer. HPV type 16 is the most prevalent HPV accounting for more than 70% of cervical cancer cases in India, followed by HPV type 18 and other high-risk types. However, an infection with HPV is essential but it is not sufficient for the development of cervical cancer, which implies the involvement of host genetic factors. The primary cause in the development and progression of cervical neoplasia has been shown to be dependent on a series of cellular genetic and epigenetic events including mutation, deletion, polymorphism and or methylation of various tumor suppressor genes, checkpoint genes of cell cycle machinery etc. Little is known about whether genetic variation in tumor suppressor genes and cell cycle regulatory genes among Indian women associate with susceptibility to cervical cancer. We showed that promoter region of tumor suppressor genes FHIT and RASSF1A were aberrantly methylated in 28.3% and 35.0% respectively in cancer cases but both genes were methylated for 13.3% cases only. We identified a novel mutation at nucleotide position 655, at codon 98 from CAT→CGT with ultimate replacement of amino acid Histidine by Arginine in cervical cancer cases. Molecular modeling was performed to predict the effect of this mutation in disease pathology. We predict that this change, His to Arg substitution in substrate binding domain may generate catalytically inactive protein with loss of tumor suppressor activity. We also showed a novel association of cell cycle regulatory gene, cyclin D1 (CCND1) variation with cervical cancer cases in Indians. Strong evidence of CCND1G870A as risk factor and G1722C as protective factor for cervical cancer was observed. Therefore, presently studies are underway to examine the practical implications of these findings. This would give us important insights into genetic predisposition to cervical cancer in our population.
子宫颈癌是一种多因素疾病,包括遗传和环境因素。人乳头瘤病毒被认为是宫颈癌的主要病因。HPV 16型是最常见的HPV,占印度宫颈癌病例的70%以上,其次是HPV 18型和其他高危类型。然而,HPV感染是必不可少的,但它并不足以发展为宫颈癌,这意味着宿主遗传因素的参与。宫颈肿瘤发生和发展的主要原因已被证明依赖于一系列细胞遗传和表观遗传事件,包括各种肿瘤抑制基因、细胞周期机制检查点基因等的突变、缺失、多态性和/或甲基化。关于印度妇女肿瘤抑制基因和细胞周期调控基因的遗传变异是否与宫颈癌易感性有关,人们知之甚少。我们发现肿瘤抑制基因FHIT和RASSF1A的启动子区域在癌症病例中分别有28.3%和35.0%的异常甲基化,但这两个基因仅在13.3%的病例中甲基化。我们在宫颈癌病例中发现了一个新的突变,在CAT→CGT的核苷酸位置655,密码子98处,氨基酸组氨酸最终被精氨酸取代。进行分子模型来预测这种突变在疾病病理中的作用。我们预测这种变化,在底物结合域中His到Arg的取代可能会产生催化失活的蛋白,并失去肿瘤抑制活性。我们还发现了细胞周期调控基因cyclin D1 (CCND1)变异与印度宫颈癌病例的新关联。CCND1G870A为宫颈癌的危险因素,G1722C为宫颈癌的保护因素。因此,目前正在进行研究,以检验这些发现的实际意义。这将为我们了解人群中宫颈癌的遗传易感性提供重要的见解。
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引用次数: 2
Invariant moment based feature analysis for abnormal erythrocyte recognition 基于不变矩的异常红细胞识别特征分析
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735380
D. Das, M. Ghosh, C. Chakraborty, Mallika Pal, A. Maity
Erythrocyte shape recognition is very important in the detection of thalassemia and anemia using microscopic images. This study aims to develop a computer aided shape recognizer for the recognition of abnormal shapes viz., tear drop, echinocyte, eliptocyte. Here such recognition is done using Hu's moments and other geometric features followed by gray level thresholding and marker controlled watershed segmentation. These features are statistically evaluated to show their significant in discriminating the mentioned abnormal and normal shapes. In the result, it is found that six moment based features are significant.
红细胞形态识别在地中海贫血和贫血的显微图像检测中非常重要。本研究旨在开发一种计算机辅助形状识别器,用于识别泪滴、棘细胞、卵泡细胞等异常形状。在这里,这种识别是使用胡矩和其他几何特征,然后是灰度阈值和标记控制的分水岭分割。对这些特征进行了统计评估,表明它们在区分上述异常形状和正常形状方面具有重要意义。结果发现,六个基于矩的特征是显著的。
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引用次数: 26
Aspergillus niser for the study of in vitro drug metabolism 尼泽曲霉用于体外药物代谢研究
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735418
K. Pramanik, N. Panda, J. Satapathy, A. Biswas
Drug metabolism is an important aspect for the study of toxic effect in human being. However, the occurrence of several regulatory issues and high cost involved in experimental study on drug metabolism, restrict the study using human as a model system. Keeping this in view, in the present study, the fungus Aspergillus niser was chosen as a model organism for the study of Clemastine metabolism as it is cheap and expresses several mammalian enzymes. The metabolism study was performed using Aspergillus niser and human and a comparative study has been done. The experimental result has established that Aspergillus niser can be a potential organism for drug metabolism study. Further, HPLC was found to be an effective analytical tool for the characterization of metabolites produced by the enzymatic reaction.
药物代谢是研究人体毒性作用的一个重要方面。然而,药物代谢实验研究中存在的一些监管问题和高昂的成本,限制了以人体为模型系统的研究。鉴于此,本研究选择真菌尼泽曲霉(Aspergillus niser)作为研究Clemastine代谢的模式生物,因为它价格低廉且能表达多种哺乳动物酶。用尼泽曲霉和人进行了代谢研究,并进行了比较研究。实验结果表明,尼泽曲霉是一种潜在的药物代谢研究生物。此外,HPLC被发现是表征酶促反应产生的代谢物的有效分析工具。
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引用次数: 1
Application of adaptive filters in noise reduction in mammography images 自适应滤波器在乳腺x线影像降噪中的应用
Pub Date : 2010-12-01 DOI: 10.1109/ICSMB.2010.5735417
H. Ramezanpour, Navid Barati, G. Darmani, Hosein Farrokhbakht
In this paper, we introduce an effective scheme for reducing noise level in mammography images by adaptive filters. The scheme proposed includes finding the best weight vector with least-mean-square (LMS) algorithm and then apply it to images. The effectiveness and less computational time required of the algorithm, are the main advantages which are not seen in mammography image enhancement literature together yet. Finally one example is brought to show the effectiveness of proposed scheme.
本文介绍了一种利用自适应滤波器降低乳房x线摄影图像噪声水平的有效方案。该方案包括利用最小均方算法寻找最佳权向量,然后将其应用于图像。该算法的有效性和较少的计算时间是在乳房x线图像增强文献中尚未看到的主要优点。最后通过一个算例验证了所提方案的有效性。
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引用次数: 0
期刊
2010 International Conference on Systems in Medicine and Biology
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