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SMCS: A lightweight MobileNet-based framework for skin cancer classification, segmentation, and explanation SMCS:一个轻量级的基于mobilenet的皮肤癌分类、分割和解释框架
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-12-15 DOI: 10.1016/j.simpa.2025.100804
Thuan Van Tran, Triet Minh Nguyen, Quy Thanh Lu
Skin is an important part of the guardian system, which helps to protect us from harmful factors such as physical impact, bacteria, viruses, and especially daily ultraviolet (UV) radiation. However, the changing of the environment in the present era creates prolonged exposure to UV, which can damage the skin and increase the risk of skin cancer. Thus, a skin cancer classification and detection framework called SMCS (Sampling in MobileNet for Skin Classification) was published by taking the power of artificial intelligence and deep learning. In this pipeline, skin illnesses can be discovered early, which aids doctors and patients in diagnosis and treatment while reducing both time and cost.
皮肤是保护系统的重要组成部分,它有助于保护我们免受有害因素的影响,如物理冲击,细菌,病毒,尤其是日常紫外线(UV)辐射。然而,当今时代环境的变化使人长时间暴露在紫外线下,这会损害皮肤,增加患皮肤癌的风险。因此,利用人工智能和深度学习的力量,发表了一个名为SMCS (Sampling in MobileNet for skin classification)的皮肤癌分类检测框架。在这个管道中,皮肤疾病可以早期发现,这有助于医生和患者的诊断和治疗,同时减少时间和成本。
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引用次数: 0
Lcpy: An open-source python package for parametric and dynamic life cycle assessment and life cycle costing analysis Lcpy:一个用于参数化和动态生命周期评估以及生命周期成本分析的开源python包
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-12-05 DOI: 10.1016/j.simpa.2025.100805
Spiros Gkousis, Evina Katsou
Life Cycle Assessment (LCA) and Life Cycle Costing (LCC) are becoming key methods for sustainability analysis. Current software solutions usually focus on one method, omitting synergies and the provision of a holistic picture of system sustainability. Integrating LCA and LCC software with complex system models, uncertainty, and optimization tools remains a barrier for integrated techno-sustainability assessments. Lcpy is an open-source python package that enables using parametric or simulation process models, in-time projections, multiple scenarios, and flexible modelling for simple and dynamic LCA and LCC, uncertainty analysis and optimization. Visualization and storage functions are provided allowing end-to-end LCA and LCC analyses.
生命周期评价(LCA)和生命周期成本计算(LCC)正在成为可持续发展分析的关键方法。当前的软件解决方案通常集中在一种方法上,忽略了协同作用和提供系统可持续性的整体画面。将LCA和LCC软件与复杂的系统模型、不确定性和优化工具集成仍然是集成技术可持续性评估的障碍。Lcpy是一个开源python包,可以使用参数化或仿真过程模型、实时预测、多场景和灵活建模,用于简单和动态的LCA和LCC、不确定性分析和优化。提供可视化和存储功能,允许端到端的LCA和LCC分析。
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引用次数: 0
GO-HKP: A Gene Ontology hierarchy-driven framework for enzyme kcat prediction GO-HKP:用于酶kcat预测的基因本体层次驱动框架
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-12-01 DOI: 10.1016/j.simpa.2025.100803
Qinghan Meng , Zhitao Mao , Hao Chen , Yuanyuan Huang , Hongwu Ma
GO-HKP is a Gene Ontology hierarchy-driven framework for predicting enzyme turnover numbers (kcat) with improved coverage, generalizability, and interpretability. It integrates curated UniProt data, ontology-based kcat propagation, and sequence-driven GO annotation (DeepGO-SE) to infer kcat for both annotated and novel enzymes. Benchmarking across four genome-scale metabolic models demonstrated substantial improvements in reaction coverage — by 56.67%, 25.1%, 16.0%, and 14.5% — compared with existing methods, highlighting its strong gap-filling capability. GO-HKP offers a biologically grounded, scalable, and transparent approach, supporting applications in metabolic engineering, drug discovery, and systems biology. The framework and Python package are available via GitHub for broad usability and reproducibility.
GO-HKP是一个基因本体论层次驱动的框架,用于预测酶周转数(kcat),具有更好的覆盖率、通用性和可解释性。它集成了整理的UniProt数据、基于本体的kcat传播和序列驱动的GO注释(DeepGO-SE),以推断已注释酶和新酶的kcat。四种基因组尺度代谢模型的基准测试表明,与现有方法相比,反应覆盖率有显著提高——分别提高56.67%、25.1%、16.0%和14.5%,突出了其强大的空白填补能力。GO-HKP提供生物学基础,可扩展和透明的方法,支持代谢工程,药物发现和系统生物学的应用。该框架和Python包可通过GitHub获得,具有广泛的可用性和可重复性。
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引用次数: 0
Software architecture description in original software publications 原始软件出版物中的软件体系结构描述
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-11-28 DOI: 10.1016/j.simpa.2025.100802
Tomasz Górski
A software architecture description is a work product that reveals software architecture. An architecture view manifests the system architecture from a specific perspective. In publications presenting original software, it is crucial to introduce the functions implemented by the software and identify its users. The structure and operation of the software should also be depicted. However, many publications contain drawings that often combine content from several views. Therefore, the paper introduces a method for describing software architecture in Use Cases and Logical views of the 1+5 model. The method expresses the architecture of a new software package for real estate sales.
软件体系结构描述是揭示软件体系结构的工作产品。架构视图从一个特定的角度显示系统架构。在介绍原始软件的出版物中,介绍软件实现的功能和识别其用户是至关重要的。还应描述软件的结构和操作。然而,许多出版物包含的绘图通常结合了来自几个视图的内容。因此,本文介绍了一种在用例和1+5模型的逻辑视图中描述软件体系结构的方法。该方法表达了一个新的房地产销售软件包的体系结构。
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引用次数: 0
‘Forensic-DataFusion-Tool’: A Python-based application for exploratory forensic data analysis using merged datasets from analytical sensors “法医数据融合工具”:一个基于python的应用程序,用于探索性法医数据分析,使用来自分析传感器的合并数据集
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-10-01 DOI: 10.1016/j.simpa.2025.100799
Giorgio Felizzato , Michele Verdi , Angelo Michele Gargantini , Nico Pellegrinelli , Francesco Saverio Romolo
Portable sensors for on-site forensic analysis have advanced significantly, enabling reliable methods for crime scene investigation. Non-destructive analytical instruments are especially useful for providing chemical information from the same specimen. Combining data from these instruments through data fusion enhances analytical responses. Data fusion merges data from different sources to improve exploratory and predictive models. No current application supports multi-dataset fusion on a single platform. To address this, we developed a Python-based ‘Forensic-DataFusion-Tool’ to merge raw and preprocessed data from multiple sensors, speeding up data fusion and enabling future machine learning updates, including classification algorithms.
用于现场法医分析的便携式传感器取得了重大进展,为犯罪现场调查提供了可靠的方法。非破坏性分析仪器对于提供同一样品的化学信息特别有用。通过数据融合将来自这些仪器的数据结合起来,可以增强分析响应。数据融合将来自不同来源的数据合并在一起,以改进探索性和预测性模型。目前没有应用程序支持单一平台上的多数据集融合。为了解决这个问题,我们开发了一个基于python的“取证-数据融合工具”,用于合并来自多个传感器的原始和预处理数据,加速数据融合,并使未来的机器学习更新成为可能,包括分类算法。
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引用次数: 0
MDM: An R package for causal multivariate time series tasks MDM:用于因果关系多变量时间序列任务的R包
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-10-01 DOI: 10.1016/j.simpa.2025.100796
Lilia Costa , Arthur Azevedo , Michel Miler Rocha dos Santos , Diego Carvalho Nascimento
The Multiregression Dynamic Model (MDM) is a framework that combines graph theory with dynamic linear models, allowing a non-Gaussian multivariate structure to emerge in the context of causal time series. Since an optimal DAG structure is an NP-hard task, this package overcomes the all-combinations search (Integer Programming Algorithm) using heuristic algorithms (like Hill Climbing). Written using R S4 Object programming, it performs learning functions (estimating network structure and its dynamic arcs), as well as includes DAG (causal) visualization, time-varying coefficients visualization, and graphical performance checks. The MDM R package is distributed under the GPL license and is accessible from GitHub.
多元回归动态模型(MDM)是一个将图论与动态线性模型结合在一起的框架,允许在因果时间序列上下文中出现非高斯多元结构。由于最优DAG结构是np困难的任务,因此该包使用启发式算法(如爬山)克服了所有组合搜索(整数规划算法)。使用R S4 Object编程编写,它执行学习功能(估计网络结构及其动态弧线),以及包括DAG(因果)可视化,时变系数可视化和图形性能检查。MDM R包是在GPL许可下发布的,可以从GitHub访问。
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引用次数: 0
pyNusinov: A Python3 software package for Solar Extreme and Far Ultraviolet radiation modeling pyNusinov:一个用于太阳极端和远紫外线辐射建模的Python3软件包
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-10-01 DOI: 10.1016/j.simpa.2025.100792
Boris Prokhorov , Oleg Zolotov , Yulia Romanovskaya , Anton Tatarnikov , Yulia Shapovalova
The pyNusinov package implements Nusinov’s extreme ultraviolet (EUVT) and far ultraviolet (FUVT) solar radiation models. Jointly, these models cover the 5–242 [nm] solar irradiance range but with different wavelength steps and a small gap between 105–115 [nm]. To third-party users, EUVT and FUVT models were published as analytical formulas and tables of corresponding coefficients. The release of the pyNusinov package provides a robust way to use, disseminate, install, and update these models. It significantly improves the models’ usage workflow, benefits from Python3 infrastructure, and facilitates early career researchers’ engagement.
pyNusinov包实现了Nusinov的极紫外(EUVT)和远紫外(FUVT)太阳辐射模型。这些模型覆盖了5-242 [nm]的太阳辐照度范围,但具有不同的波长步长,在105-115 [nm]之间有很小的差距。对于第三方用户,EUVT和FUVT模型以解析公式和对应系数表的形式发布。pyNusinov包的发布提供了一种健壮的方式来使用、传播、安装和更新这些模型。它显著改善了模型的使用流程,受益于Python3基础架构,并促进了早期职业研究人员的参与。
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引用次数: 0
SkinProNet: An attention-based deep learning system for skin disease classification and segmentation SkinProNet:一个基于注意力的深度学习系统,用于皮肤病分类和分割
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-10-01 DOI: 10.1016/j.simpa.2025.100798
N Annalakshmi , S Umarani
SkinProNet is an AI-powered software tool designed for the classification and segmentation of skin lesions, including potentially life-threatening conditions like melanoma. It employs a novel hybrid deep learning architecture that combines advanced preprocessing methods with state-of-the-art models: EfficientNetV2Small for feature extraction, an optimized ACRNN for accurate classification, and U2-Net++ for precise lesion segmentation. This integrated approach enhances early detection and diagnosis of skin diseases. The model classifies six types of skin diseases with a high accuracy of 94.04% using both benchmark datasets and real-world clinical images. The results highlight the model’s potential as a reliable computer-aided diagnostic tool in dermatology. By leveraging attention-based mechanisms and efficient neural architectures, the software supports healthcare practitioners in diagnosing skin conditions quickly, accurately, and non-invasively.
SkinProNet是一款人工智能驱动的软件工具,旨在对皮肤病变进行分类和分割,包括黑色素瘤等可能危及生命的疾病。它采用了一种新型的混合深度学习架构,结合了先进的预处理方法和最先进的模型:用于特征提取的EfficientNetV2Small,用于精确分类的优化ACRNN,以及用于精确病灶分割的u2net ++。这种综合方法加强了对皮肤病的早期发现和诊断。该模型使用基准数据集和真实临床图像对六种皮肤病进行分类,准确率高达94.04%。结果突出了该模型作为皮肤科可靠的计算机辅助诊断工具的潜力。通过利用基于注意力的机制和高效的神经架构,该软件支持医疗保健从业者快速、准确和非侵入性地诊断皮肤状况。
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引用次数: 0
TMFS-MTS: Toolbox for metaheuristic feature selection in multivariate time series 多变量时间序列的元启发式特征选择工具箱
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-10-01 DOI: 10.1016/j.simpa.2025.100789
Mariusz Oszust, Marian Wysocki
Feature selection in multivariate time series is a key challenge in modern data analysis, as high-dimensional data often include temporal dependencies and irrelevant features degrading classifier performance. To address these issues, a comparison with existing approaches is essential. Therefore, this work introduces the Toolbox for Metaheuristic Feature Selection in Multivariate Time Series (TMFS-MTS), providing an environment for feature selection and metaheuristic evaluation. It supports diverse fitness measures and advanced visualizations, including convergence curves, feature count tracking, runtime analysis, Wilcoxon tests, and 2D embeddings. Implemented in MATLAB, TMFS-MTS offers a standardized framework for advancing research in multivariate time series feature selection.
多变量时间序列的特征选择是现代数据分析中的一个关键挑战,因为高维数据通常包含时间依赖性和降低分类器性能的不相关特征。为了解决这些问题,与现有方法进行比较是必不可少的。因此,本文引入了多元时间序列中元启发式特征选择工具箱(TMFS-MTS),为特征选择和元启发式评估提供了一个环境。它支持多种适应度度量和高级可视化,包括收敛曲线、特征计数跟踪、运行时分析、Wilcoxon测试和2D嵌入。TMFS-MTS在MATLAB中实现,为推进多元时间序列特征选择的研究提供了一个标准化的框架。
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引用次数: 0
IRJT-Secure: Open-source image steganography with Quadristego embedding and Huffman compression IRJT-Secure:开源图像隐写与Quadristego嵌入和霍夫曼压缩
IF 1.2 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2025-10-01 DOI: 10.1016/j.simpa.2025.100801
Irsyad Fikriansyah Ramadhan , Ntivuguruzwa Jean De La Croix , Tohari Ahmad
In information security, image steganography remains a crucial technique for covert data transmission. However, achieving an optimal balance between payload capacity, imperceptibility, and robustness against steganalysis attacks remains a significant challenge. This paper presents IRJT-Secure, an open-source software implementation based on the Quadristego Logic paradigm and Huffman coding for data compression. The proposed technique creates four stego images from a single cover image, in contrast to conventional dual-image steganography. This maintains the original image’s visual integrity while enabling more effective and uniform data embedding. IRJT-Secure provides a valuable resource for advancing research and development in spatial domain steganography, supporting the creation of more secure, robust, and efficient data hiding techniques for digital security
在信息安全领域,图像隐写技术是实现数据隐蔽传输的关键技术。然而,在有效载荷能力、不可感知性和抗隐写攻击的稳健性之间实现最佳平衡仍然是一个重大挑战。本文介绍了IRJT-Secure,一个基于Quadristego逻辑范式和霍夫曼编码的数据压缩开源软件实现。与传统的双图像隐写术相比,所提出的技术从单个封面图像创建四个隐写图像。这保持了原始图像的视觉完整性,同时实现了更有效和统一的数据嵌入。IRJT-Secure为推进空间域隐写技术的研究和发展提供了宝贵的资源,支持为数字安全创建更安全、健壮和高效的数据隐藏技术
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引用次数: 0
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Software Impacts
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