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Bessel_DMD: The numerical code based on the scalar Fresnel–Kirchhoff integration to calculate the diffraction and bessel-like beam by using the DMD Bessel_DMD:基于标量菲涅尔-基尔霍夫积分的数值代码,通过使用 DMD 计算衍射和类贝塞尔光束
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-07-05 DOI: 10.1016/j.simpa.2024.100683
Ting-Han Pei , Yilei Zhang

We provide numerical software based on the MATLAB programming language to study the Bessel-like beams generated by special instruments such as DMD. The calculations are based on the scalar Fresnel–Kirchhoff integration within the scope of Fourier Optics. This analysis is particularly important because the addition of higher-order Bessel terms may produce additional unexpected experimental results in some applications. We emphasize the seldom-mentioned imaging characteristic on the lens, where the central point is shifted, and provide numerical software to understand the expression of the Bessel-like function obtained from important theoretical derivation. It also benefits to verify and explain the experimental results.

我们提供基于 MATLAB 编程语言的数值软件,用于研究 DMD 等特殊仪器产生的类贝塞尔光束。计算基于傅立叶光学范围内的标量菲涅尔-基尔霍夫积分。这一分析尤为重要,因为在某些应用中,添加高阶贝塞尔项可能会产生更多意想不到的实验结果。我们强调了透镜上很少提及的成像特性,即中心点偏移,并提供了数值软件来理解从重要理论推导中获得的类贝塞尔函数的表达式。这也有利于验证和解释实验结果。
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引用次数: 0
ANNOTE: Annotation of time-series events 注释:时间序列事件的注释
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-07-04 DOI: 10.1016/j.simpa.2024.100679
René Groh , Jie Yu Li , Nicole Y.K. Li-Jessen , Andreas M. Kist

Supervised training of machine learning models heavily relies on accurate annotations. However, data annotation, such as in the case of time-series signals, poses a labor-intensive challenge. Here, we present a new annotation software, Annotation of Time-series Events (ANNOTE), to handle longitudinal, time-series signals as in highly complex physiological events. ANNOTE offers flexibility and adaptability to streamline the annotation process through an intuitive user interface, effectively meeting diverse annotation needs. Users can annotate regions of interest with precision down to a single data point. ANNOTE presents a useful tool to support researchers in handling time-series biomedical data for downstream machine-learning analyses.

机器学习模型的监督训练在很大程度上依赖于准确的注释。然而,数据注释(如时间序列信号)是一项劳动密集型挑战。在此,我们介绍一款新的注释软件--时间序列事件注释(ANNOTE),用于处理纵向时间序列信号,如高度复杂的生理事件。ANNOTE 具有灵活性和适应性,可通过直观的用户界面简化注释过程,有效满足各种注释需求。用户可以精确到单个数据点来注释感兴趣的区域。ANNOTE 是支持研究人员处理时间序列生物医学数据以进行下游机器学习分析的有用工具。
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引用次数: 0
SSFCM-FWCW: Semi-Supervised Fuzzy C-Means method based on Feature-Weight and Cluster-Weight learning SSFCM-FWCW:基于特征-权值和聚类-权值学习的半监督模糊 C-Means 方法
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-28 DOI: 10.1016/j.simpa.2024.100678
Amin Golzari Oskouei , Negin Samadi , Jafar Tanha , Asgarali Bouyer

SSFCM-FWCW (Feature-Weight and Cluster-Weight based Semi-Supervised Fuzzy C-Means) is a soft clustering method. It incorporates supplementary label information to enhance the clustering quality. An adaptive local feature weighting technique is utilized to weight features based on their significance within specific clusters. Additionally, an adaptive weighting technique is applied to diminish the sensitivity to the initial center selection, effectively distinguishing between the effects of various clusters. The conjunction of label information and adaptive weighting results in an optimal fuzzy c-means clustering with an insight into the importance of individual features and clusters. An open-source Matlab implementation of SSFCM-FWCW is available.

SSFCM-FWCW(基于特征-权值和聚类-权值的半监督模糊 C-Means 方法)是一种软聚类方法。它结合了补充标签信息来提高聚类质量。它采用自适应局部特征加权技术,根据特征在特定聚类中的重要性对其进行加权。此外,自适应加权技术还能降低对初始中心选择的敏感度,有效区分不同聚类的影响。将标签信息和自适应加权结合起来,就能实现最佳的模糊 c-means 聚类,并深入了解各个特征和聚类的重要性。SSFCM-FWCW 的开源 Matlab 实现已经发布。
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引用次数: 0
BERLib: A Basic Encoding Rules implementation BERLib:基本编码规则实施
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-28 DOI: 10.1016/j.simpa.2024.100677
Valentin Stangaciu, Cristina Stangaciu

In this paper we present a Basic Encoding Rules library implemented in three programming languages (C, C++ and C#) that offers encoding and decoding of data types in order to be used in serialization and deserialization processes in communication protocols. The implementation is consistent with the currently active standards and it offers a great degree of scalability. BERLib is also highly documented and significant examples are provided for all the programming languages used. Our work qualifies as an ideal solution for providing data encoding and decoding in communication protocol design especially for Wireless Sensor Networks and Internet of Things.

本文介绍了一个用三种编程语言(C、C++ 和 C#)实现的基本编码规则库,该库可对数据类型进行编码和解码,以便在通信协议的序列化和反序列化过程中使用。其实施符合当前的现行标准,并具有很强的可扩展性。BERLib 的文档也非常丰富,并为所有使用的编程语言提供了重要示例。我们的工作是在通信协议设计(尤其是无线传感器网络和物联网)中提供数据编码和解码的理想解决方案。
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引用次数: 0
Accelerating Euler characteristic analysis: A multiprocessing approach with Octo-Voxel patterns and discrete chunk extraction 加速欧拉特征分析:采用八象素模式和离散块提取的多处理方法
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-25 DOI: 10.1016/j.simpa.2024.100671
César Eduardo Muñoz-Chávez, Hermilo Sánchez-Cruz

We present a new library designed to simplify the analysis of Euler characteristics. This program addresses the difficulties involved in generating 3D test objects and the complexities of extracting Octo-Voxel patterns. The library uses a novel method to rapidly generate data and extract descriptors by using effective multiprocessing. Furthermore, we have developed a method for extracting discrete CHUNKS from an image, allowing for separate multiprocessing assessment. This method accelerates the process of combination extraction and offers researchers a quick and effective way to explore Euler characteristics in a variety of applications.

我们介绍了一个旨在简化欧拉特性分析的新程序库。该程序解决了生成三维测试对象的困难和提取八象素模式的复杂性。该程序库采用一种新方法,通过有效的多进程处理,快速生成数据并提取描述符。此外,我们还开发了一种从图像中提取离散 CHUNKS 的方法,允许进行单独的多重处理评估。这种方法加快了组合提取的过程,为研究人员在各种应用中探索欧拉特征提供了一种快速有效的方法。
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引用次数: 0
deforce: Derivative-free algorithms for optimizing Cascade Forward Neural Networks deforce:优化级联前向神经网络的无衍生算法
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-25 DOI: 10.1016/j.simpa.2024.100675
Nguyen Van Thieu , Hoang Nguyen , Harish Garg , Gia Sirbiladze

This paper aims to introduce the ‘deforce’ framework, an open-source Python library constituted on top of Numpy, Scikit-Learn, PyTorch, and Mealpy. This framework provides hybrid models that combine derivative-free techniques with Cascade Forward Neural Networks (CFNNs). By inheriting from scikit-learn’s estimator, deforce’s models ensure easy integration into existing machine learning pipelines. It also has many advantages, including a simple installation process, a user-friendly interface, and adaptability to various user requirements. For researchers and practitioners looking to improve CFNN performance with minimal implementation effort, deforce offers a useful and approachable option.

本文旨在介绍 "deforce "框架,它是一个基于 Numpy、Scikit-Learn、PyTorch 和 Mealpy 的开源 Python 库。该框架提供了无衍生技术与级联前向神经网络(CFNN)相结合的混合模型。通过继承 scikit-learn 的估计器,deforce 的模型可以确保轻松集成到现有的机器学习管道中。它还有很多优点,包括安装过程简单、用户界面友好以及可适应各种用户需求。对于希望以最小的实施工作量提高 CFNN 性能的研究人员和从业人员来说,deforce 提供了一个实用、易用的选择。
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引用次数: 0
SRcdFuzzy: Software for simulating adaptive regulatory controllers of cyclical disturbances with frequency variations estimated from fuzzy logic SRcdFuzzy:模拟根据模糊逻辑估算频率变化的周期性干扰自适应调节控制器的软件
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-24 DOI: 10.1016/j.simpa.2024.100672
Rogério P. Pereira , Eduardo J.F. Andrade , José L.F. Salles , Carlos T. Valadão , Ravena S. Monteiro , Gustavo Maia de Almeida , Marco A.S.L. Cuadros , Teodiano F. Bastos-Filho

This article introduces SRcdFuzzy, a MATLAB-based software designed to simulate two controllers: the Adaptive Fuzzy Iterative Learning Controller (AF-ILC) and the Adaptive Fuzzy Repetitive Generalized Predictive Controller (AFR-GPC). These controllers, as proposed in a companion paper [7], aim to minimize cyclical disturbances with small frequency range variations commonly encountered in industrial process control loops. They utilize fuzzy logic to estimate the disturbance cycle, employing rules based on past values of the integral of the absolute error between the setpoint and output. The estimated disturbance cycle period is then communicated to the regulatory controllers, guiding specific control actions to mitigate oscillations in the process output. Furthermore, each controller includes a dedicated interface, offering testing options for various scenarios, including disturbances with different frequencies.

本文介绍了 SRcdFuzzy,这是一款基于 MATLAB 的软件,旨在模拟两种控制器:自适应模糊迭代学习控制器(AF-ILC)和自适应模糊重复广义预测控制器(AFR-GPC)。这些控制器是在一篇论文[7]中提出的,旨在将工业过程控制回路中常见的频率范围变化较小的周期性干扰降至最低。它们利用模糊逻辑来估计干扰周期,采用的规则基于设定点和输出之间绝对误差积分的过去值。然后将估算出的干扰周期传达给调节控制器,指导具体的控制操作,以减轻过程输出中的振荡。此外,每个控制器都有一个专用接口,为各种情况提供测试选项,包括不同频率的干扰。
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引用次数: 0
ODBP: Modern data processing for additive manufacturing thermal models in Abaqus ODBP:在 Abaqus 中对增材制造热模型进行现代数据处理
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-22 DOI: 10.1016/j.simpa.2024.100676
Clark Hensley , J. Logan Betts , Chuyen Nguyen , Matthew W. Priddy

ODBP is a novel tool for interfacing with the Abaqus .odb file format for metal-based additive manufacturing (AM), transferring the data to the open source .hdf5 format, providing both modern data visualization methods and multi-core, high performance capabilities for data manipulation. Abaqus is a commercially-available software for performing finite element analysis (FEA), which generates substantial datasets, stored in the proprietary .odb file format. FEA is used to model the thermal and mechanical response resulting from deposition during the wire-arc directed energy deposition (arc-DED) process, an AM process. ODBP focuses on providing a more robust and efficient interface to .odb data than Abaqus.

ODBP 是一种新颖的工具,用于与基于金属的增材制造 (AM) 的 Abaqus .odb 文件格式接口,将数据传输到开源 .hdf5 格式,提供现代数据可视化方法和多核高性能数据处理能力。Abaqus 是一款用于执行有限元分析 (FEA) 的商用软件,可生成大量数据集,并以专有的 .odb 文件格式存储。有限元分析用于模拟线弧定向能沉积(arc-DED)过程中沉积产生的热响应和机械响应。ODBP 专注于为 .odb 数据提供比 Abaqus 更强大、更高效的接口。
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引用次数: 0
EBLT — Blueprints testing library using fuzz testing EBLT - 使用模糊测试的蓝图测试库
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-19 DOI: 10.1016/j.simpa.2024.100674
Ciprian Păduraru , Rareș Cristea , Alin Stefanescu

Low-code and no-code paradigms are accessible, but lack mature testing methods. This gap needs to be addressed as such applications provide a way for stakeholders to interact with or define the requirements of applications in video games, digital twins, and simulations. Blueprints are an example of this paradigm, enabling a visual definition of functionality or requirements. We proposed an open-source tool that uses fuzz testing and applied it to Unreal Engine blueprints. Tests triggered by stakeholder changes are automatically generated, offering support for tuning parameters and optimizing testing time.

低代码和无代码范式可以使用,但缺乏成熟的测试方法。这一差距亟待解决,因为这类应用为利益相关者提供了一种与视频游戏、数字双胞胎和模拟中的应用进行交互或定义其需求的方法。蓝图就是这种范例的一个例子,它可以对功能或需求进行可视化定义。我们提出了一种使用模糊测试的开源工具,并将其应用于虚幻引擎蓝图。由利益相关者变更触发的测试会自动生成,并支持调整参数和优化测试时间。
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引用次数: 0
StoX: Stochastic multistage recruitment model for seed dispersal effectiveness StoX:种子传播效果的随机多阶段招募模型
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-06-14 DOI: 10.1016/j.simpa.2024.100673
Julio Martín-Herrero , María Calviño-Cancela

Seed dispersal effectiveness measures the number of new plants effectively produced by the services of seed disperser agents. This depends on a complex process involving multiple stages and actors, and has profound implications for conservation. StoX is a distribution agnostic multistage stochastic model that differentiates among dispersers in their contribution to seed rain and recruitment. It can be parameterized with quantity and quality components of dispersal measured in the field. It preserves the inherent stochastic nature of the recruitment process and can be validated by statistical comparison between its predictions and recruitment patterns in the field. StoX has already been used in several successful studies, at both population and community levels.

种子传播的有效性是指通过种子传播者的服务有效产生的新植物的数量。这取决于一个涉及多个阶段和参与者的复杂过程,对自然保护有着深远的影响。StoX 是一个与分布无关的多阶段随机模型,可区分不同散播者对种子雨和新植株的贡献。该模型可根据实地测量的扩散数量和质量要素进行参数化。它保留了引种过程固有的随机性,并可通过统计比较其预测结果和实地引种模式来验证。StoX 已成功应用于多项研究,包括种群和群落层面的研究。
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引用次数: 0
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Software Impacts
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