Pub Date : 2024-06-22DOI: 10.1016/j.simpa.2024.100676
Clark Hensley , J. Logan Betts , Chuyen Nguyen , Matthew W. Priddy
ODBP is a novel tool for interfacing with the Abaqus .odb file format for metal-based additive manufacturing (AM), transferring the data to the open source .hdf5 format, providing both modern data visualization methods and multi-core, high performance capabilities for data manipulation. Abaqus is a commercially-available software for performing finite element analysis (FEA), which generates substantial datasets, stored in the proprietary .odb file format. FEA is used to model the thermal and mechanical response resulting from deposition during the wire-arc directed energy deposition (arc-DED) process, an AM process. ODBP focuses on providing a more robust and efficient interface to .odb data than Abaqus.
{"title":"ODBP: Modern data processing for additive manufacturing thermal models in Abaqus","authors":"Clark Hensley , J. Logan Betts , Chuyen Nguyen , Matthew W. Priddy","doi":"10.1016/j.simpa.2024.100676","DOIUrl":"https://doi.org/10.1016/j.simpa.2024.100676","url":null,"abstract":"<div><p>ODBP is a novel tool for interfacing with the Abaqus .odb file format for metal-based additive manufacturing (AM), transferring the data to the open source .hdf5 format, providing both modern data visualization methods and multi-core, high performance capabilities for data manipulation. Abaqus is a commercially-available software for performing finite element analysis (FEA), which generates substantial datasets, stored in the proprietary .odb file format. FEA is used to model the thermal and mechanical response resulting from deposition during the wire-arc directed energy deposition (arc-DED) process, an AM process. ODBP focuses on providing a more robust and efficient interface to .odb data than Abaqus.</p></div>","PeriodicalId":29771,"journal":{"name":"Software Impacts","volume":"21 ","pages":"Article 100676"},"PeriodicalIF":1.3,"publicationDate":"2024-06-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2665963824000642/pdfft?md5=9bbffb1973f3d21d9e421c3a09d317f7&pid=1-s2.0-S2665963824000642-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141483954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Low-code and no-code paradigms are accessible, but lack mature testing methods. This gap needs to be addressed as such applications provide a way for stakeholders to interact with or define the requirements of applications in video games, digital twins, and simulations. Blueprints are an example of this paradigm, enabling a visual definition of functionality or requirements. We proposed an open-source tool that uses fuzz testing and applied it to Unreal Engine blueprints. Tests triggered by stakeholder changes are automatically generated, offering support for tuning parameters and optimizing testing time.
{"title":"EBLT — Blueprints testing library using fuzz testing","authors":"Ciprian Păduraru , Rareș Cristea , Alin Stefanescu","doi":"10.1016/j.simpa.2024.100674","DOIUrl":"https://doi.org/10.1016/j.simpa.2024.100674","url":null,"abstract":"<div><p>Low-code and no-code paradigms are accessible, but lack mature testing methods. This gap needs to be addressed as such applications provide a way for stakeholders to interact with or define the requirements of applications in video games, digital twins, and simulations. Blueprints are an example of this paradigm, enabling a visual definition of functionality or requirements. We proposed an open-source tool that uses fuzz testing and applied it to Unreal Engine blueprints. Tests triggered by stakeholder changes are automatically generated, offering support for tuning parameters and optimizing testing time.</p></div>","PeriodicalId":29771,"journal":{"name":"Software Impacts","volume":"21 ","pages":"Article 100674"},"PeriodicalIF":1.3,"publicationDate":"2024-06-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2665963824000629/pdfft?md5=387f7aef32ce36596fc145a8e23008ad&pid=1-s2.0-S2665963824000629-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141483953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-14DOI: 10.1016/j.simpa.2024.100673
Julio Martín-Herrero , María Calviño-Cancela
Seed dispersal effectiveness measures the number of new plants effectively produced by the services of seed disperser agents. This depends on a complex process involving multiple stages and actors, and has profound implications for conservation. StoX is a distribution agnostic multistage stochastic model that differentiates among dispersers in their contribution to seed rain and recruitment. It can be parameterized with quantity and quality components of dispersal measured in the field. It preserves the inherent stochastic nature of the recruitment process and can be validated by statistical comparison between its predictions and recruitment patterns in the field. StoX has already been used in several successful studies, at both population and community levels.
{"title":"StoX: Stochastic multistage recruitment model for seed dispersal effectiveness","authors":"Julio Martín-Herrero , María Calviño-Cancela","doi":"10.1016/j.simpa.2024.100673","DOIUrl":"10.1016/j.simpa.2024.100673","url":null,"abstract":"<div><p>Seed dispersal effectiveness measures the number of new plants effectively produced by the services of seed disperser agents. This depends on a complex process involving multiple stages and actors, and has profound implications for conservation. StoX is a distribution agnostic multistage stochastic model that differentiates among dispersers in their contribution to seed rain and recruitment. It can be parameterized with quantity and quality components of dispersal measured in the field. It preserves the inherent stochastic nature of the recruitment process and can be validated by statistical comparison between its predictions and recruitment patterns in the field. StoX has already been used in several successful studies, at both population and community levels.</p></div>","PeriodicalId":29771,"journal":{"name":"Software Impacts","volume":"21 ","pages":"Article 100673"},"PeriodicalIF":1.3,"publicationDate":"2024-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2665963824000617/pdfft?md5=9fd36c2e294a0983ef1b6080e174f371&pid=1-s2.0-S2665963824000617-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141406952","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-07DOI: 10.1016/j.simpa.2024.100668
Robert M. Auenhammer , Carolyn Oddy , Jisoo Kim , Lars P. Mikkelsen
For fibre-reinforced composites, most of their mechanical properties is tied to the fibre scale. Thus, imaging-based characterisation demands resolving fibres to characterise these materials accurately. However, high resolutions limit the field of view and lead to lengthy acquisition times. Emerging non-destructive imaging technologies and algorithms now accurately provide fibre orientations without detecting individual fibres. Studies show that voxel sizes up to fifteen times the fibre diameter are feasible, still allowing accurate tensile modulus predictions. Our presented software incorporates sub-voxel fibre orientation distributions using ultra-low-resolution three-dimensional X-ray tomography data in a numerical model, providing an effective method for characterising these materials.
对于纤维增强复合材料而言,其大部分机械特性都与纤维尺度有关。因此,基于成像的表征技术要求对纤维进行分辨,以准确表征这些材料。然而,高分辨率限制了视野,导致采集时间过长。现在,新兴的非破坏性成像技术和算法可以在不检测单个纤维的情况下准确提供纤维方向。研究表明,体素尺寸可达纤维直径的 15 倍是可行的,但仍能准确预测拉伸模量。我们介绍的软件将使用超低分辨三维 X 射线断层扫描数据的子体素纤维取向分布纳入数值模型中,为表征这些材料提供了一种有效的方法。
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Pub Date : 2024-06-07DOI: 10.1016/j.simpa.2024.100669
Benjamin Vignau, Patrice Clemente, Pascal Berthomé
This article describes a software suite designed for systematic and automatic literature reviews. Actually, we used these tools to help us build our systematic literature review on our research topic: biometric authentication using PPG (photoplethysmography). However, our tools can be easily applied (and have been applied) to other fields, whether scientific (state of the art) or technological (technology watch). Our software suite is made of two softwares. The first one helps to extract, merge and filter all the references in the pdf file versions of the papers. The second one helps to make statistical analysis on the dataset created for the SLR.
本文介绍了一套专为系统性自动文献综述而设计的软件。实际上,我们使用这些工具来帮助我们就我们的研究课题进行系统的文献综述:使用 PPG(血压计)进行生物识别。不过,我们的工具也可以很容易地应用于(而且已经应用于)其他领域,无论是科学领域(技术现状)还是技术领域(技术观察)。我们的软件套件由两个软件组成。第一个软件可帮助提取、合并和过滤论文 pdf 文件版本中的所有参考文献。第二个软件可对为 SLR 创建的数据集进行统计分析。
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Pub Date : 2024-06-06DOI: 10.1016/j.simpa.2024.100670
Rafael L. Rangel
Accurate multiphysics simulations of particle-formed materials are required in various engineering applications. The Discrete Element Method (DEM) stands out for its ability to capture the complex behavior of such materials. However, the multitude of particle interaction models and parameters involved pose challenges for analysts and researchers. DEMLab addresses this issue as an open-source MATLAB software that offers a user-friendly environment for exploring DEM models in small to medium-scale problems. With a modular and extensible code, it facilitates immediate implementations for testing different formulations or developing new ones. This paper details the software capabilities and how it impacts academic activities.
各种工程应用都需要对颗粒成型材料进行精确的多物理场模拟。离散元素法(DEM)因其能够捕捉此类材料的复杂行为而脱颖而出。然而,大量的颗粒相互作用模型和参数给分析人员和研究人员带来了挑战。DEMLab 解决了这一问题,它是一款开源的 MATLAB 软件,为探索中小型问题中的 DEM 模型提供了用户友好型环境。该软件采用模块化和可扩展的代码,便于立即实施,以测试不同的计算公式或开发新的计算公式。本文将详细介绍该软件的功能及其对学术活动的影响。
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Pub Date : 2024-06-03DOI: 10.1016/j.simpa.2024.100667
Christian G. Fink , Pavel Sanda , Logan Bayer , Eroma Abeysinghe , Maxim Bazhenov , Giri P. Krishnan
Understanding the function of sleep and its associated neural rhythms is an important goal in neuroscience. While many theoretical models of neural dynamics during sleep exist, few include the effects of neuromodulators on sleep oscillations and describe transitions between sleep and wake states or different sleep stages. Here, we started with a C++-based thalamocortical network model that describes characteristic thalamic and cortical oscillations specific to sleep. This model, which includes a biophysically realistic description of intrinsic and synaptic channels, allows for testing the effects of different neuromodulators, intrinsic cell properties, and synaptic connectivity on neural dynamics during sleep. We present a complete reimplementation of this previously-published sleep model in the standardized NEURON/Python framework, making it more accessible to the wider scientific community.
了解睡眠及其相关神经节律的功能是神经科学的一个重要目标。虽然已有许多睡眠期间神经动态的理论模型,但很少有模型包括神经调节剂对睡眠振荡的影响,以及睡眠和觉醒状态或不同睡眠阶段之间的转换。在这里,我们从一个基于 C++ 的丘脑皮层网络模型入手,该模型描述了睡眠特有的丘脑和皮层振荡特征。该模型包括对内在和突触通道的生物物理现实描述,可用于测试不同神经调节剂、细胞内在特性和突触连接对睡眠期间神经动力学的影响。我们在标准化的 NEURON/Python 框架中重新完整地实现了这一以前发表的睡眠模型,使其更容易为更广泛的科学界所使用。
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The BlockSupply project is a pioneering initiative that seeks to redefine supply chain management by leveraging blockchain technology to ensure real-time monitoring of product movements and enhance transparency, security, and traceability. The software offers key functionalities such as creating a private blockchain network, integrating tracking sensors for real-time data collection, secure recording of product data, user authentication, authorization management, and alerts for abnormal events. It is developed using technologies like Web3.js, React.js, Solidity, Ganache, and GitHub, which are integrated into the project’s architecture to create an efficient and secure blockchain-based supply chain solution. Furthermore, the project’s impact is expected to be significant, contributing to scientific advancements in secure and efficient supply chain operations and reshaping the landscape of logistics traceability. As the software gains traction in real-world scenarios, its transformative influence on data reliability, security, and operational efficiency in supply chain research is poised to be showcased in publications.
{"title":"BlockSupply: Blockchain-based logistics traceability solution","authors":"Kamal Idrissi Zineb , Lachgar Mohamed , Hrimech Hamid , Yousfi Meryem , Layoune Ghita , Hanim Hanae","doi":"10.1016/j.simpa.2024.100666","DOIUrl":"https://doi.org/10.1016/j.simpa.2024.100666","url":null,"abstract":"<div><p>The BlockSupply project is a pioneering initiative that seeks to redefine supply chain management by leveraging blockchain technology to ensure real-time monitoring of product movements and enhance transparency, security, and traceability. The software offers key functionalities such as creating a private blockchain network, integrating tracking sensors for real-time data collection, secure recording of product data, user authentication, authorization management, and alerts for abnormal events. It is developed using technologies like Web3.js, React.js, Solidity, Ganache, and GitHub, which are integrated into the project’s architecture to create an efficient and secure blockchain-based supply chain solution. Furthermore, the project’s impact is expected to be significant, contributing to scientific advancements in secure and efficient supply chain operations and reshaping the landscape of logistics traceability. As the software gains traction in real-world scenarios, its transformative influence on data reliability, security, and operational efficiency in supply chain research is poised to be showcased in publications.</p></div>","PeriodicalId":29771,"journal":{"name":"Software Impacts","volume":"21 ","pages":"Article 100666"},"PeriodicalIF":2.1,"publicationDate":"2024-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S266596382400054X/pdfft?md5=ba5dbadbce6d28394478120e237f4386&pid=1-s2.0-S266596382400054X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141241625","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-23DOI: 10.1016/j.simpa.2024.100653
Amar Tauqeer , Anna Fensel
General Data Protection Regulation (GDPR) is compulsory for processing personally identifiable data (PID) across Europe after 2018. Specifically when sharing research data, we cannot process PID without a legal basis defined by GDPR. To facilitate this, we present a scalable and interoperable automated Contract Compliance Verification (CCV) tool that enables GDPR-compliant contract management and data sharing. With the implementation of two scenarios in smart cities and insurance domains, we show how CCV is helpful to process PID and make data collection and integration (e.g., from crowdsourcing) easier.
{"title":"GDPR Data Sharing Contract Management and Compliance Verification Tool","authors":"Amar Tauqeer , Anna Fensel","doi":"10.1016/j.simpa.2024.100653","DOIUrl":"10.1016/j.simpa.2024.100653","url":null,"abstract":"<div><p>General Data Protection Regulation (GDPR) is compulsory for processing personally identifiable data (PID) across Europe after 2018. Specifically when sharing research data, we cannot process PID without a legal basis defined by GDPR. To facilitate this, we present a scalable and interoperable automated Contract Compliance Verification (CCV) tool that enables GDPR-compliant contract management and data sharing. With the implementation of two scenarios in smart cities and insurance domains, we show how CCV is helpful to process PID and make data collection and integration (<em>e.g.</em>, from crowdsourcing) easier.</p></div>","PeriodicalId":29771,"journal":{"name":"Software Impacts","volume":"21 ","pages":"Article 100653"},"PeriodicalIF":2.1,"publicationDate":"2024-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2665963824000411/pdfft?md5=40bfb412e501656e51d9fd42b6f84fe8&pid=1-s2.0-S2665963824000411-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141138202","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-21DOI: 10.1016/j.simpa.2024.100665
Hilda Chris-Amadin, Osezua Ibhadode
Triply Periodic Minimal Surfaces (TPMS) are parametrically generated lattices with topology-driven properties. They are emerging as a significant innovation, finding wide-ranging applications. This paper introduces LattGen, a software solution that addresses the complexity of designing these surfaces. This tool allows users to easily customize their desired surfaces’ size, volume fraction, grading, and hybridization. LattGen also allows for the import of arbitrary domains and the export to standard computer-aided design platforms for additive manufacturing. This design platform automates the creation of porous structures, making them a valuable tool in various scientific, engineering, and creative fields.
{"title":"LattGen: A TPMS lattice generation tool","authors":"Hilda Chris-Amadin, Osezua Ibhadode","doi":"10.1016/j.simpa.2024.100665","DOIUrl":"10.1016/j.simpa.2024.100665","url":null,"abstract":"<div><p>Triply Periodic Minimal Surfaces (TPMS) are parametrically generated lattices with topology-driven properties. They are emerging as a significant innovation, finding wide-ranging applications. This paper introduces LattGen, a software solution that addresses the complexity of designing these surfaces. This tool allows users to easily customize their desired surfaces’ size, volume fraction, grading, and hybridization. LattGen also allows for the import of arbitrary domains and the export to standard computer-aided design platforms for additive manufacturing. This design platform automates the creation of porous structures, making them a valuable tool in various scientific, engineering, and creative fields.</p></div>","PeriodicalId":29771,"journal":{"name":"Software Impacts","volume":"21 ","pages":"Article 100665"},"PeriodicalIF":2.1,"publicationDate":"2024-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2665963824000538/pdfft?md5=32f6b64df9a901faca173be65d71d958&pid=1-s2.0-S2665963824000538-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141145608","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}