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HV-Inv: A MATLAB-based graphical tool for the direct and inverse problems of the horizontal-to-vertical spectral ratio under the diffuse field theory HV-Inv:基于 MATLAB 的图形工具,用于解决漫射场理论下水平-垂直光谱比的正反问题
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-10-09 DOI: 10.1016/j.simpa.2024.100706
José Piña-Flores , Antonio García-Jerez , Francisco J. Sánchez-Sesma , Francisco Luzón , Sergio Márquez-Domínguez
The relationship between the horizontal-to-vertical spectral ratio of ambient seismic noise and the elastic Green’s function has been established based on the principles of seismic interferometry. We have developed HV-Inv, a software designed in MATLAB for the forward and inverse calculations of the Horizontal-to-Vertical spectral ratio of ambient seismic noise (H/V) under the theory of diffuse fields. HV-Inv features both global and local inversion methods, supporting the simultaneous inversion of Rayleigh and Love wave dispersion curves with H/V. The goal is for it to be an effective tool for passive seismic exploration.
环境地震噪声的水平垂直谱比与弹性格林函数之间的关系是根据地震干涉测量原理建立的。我们用 MATLAB 开发了 HV-Inv 软件,用于在扩散场理论下对环境地震噪声的水平-垂直谱比(H/V)进行正演和反演计算。HV-Inv 具有全局和局部反演方法,支持同时反演具有 H/V 的瑞利波和爱波频散曲线。目标是使其成为被动地震勘探的有效工具。
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引用次数: 0
FEGC 1.0: Flow Energy Gradient Calculator as a toolbox for predicting fluid flow instability initiation locus FEGC 1.0:流动能量梯度计算器作为预测流体流动不稳定性起始位置的工具箱
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-10-05 DOI: 10.1016/j.simpa.2024.100705
Iman Farahbakhsh, Benyamin Barani Nia
The Flow Energy Gradient Calculator (FEGC) is a Fortran-based tool designed to analyze fluid instability by calculating the energy gradient ratio, offering insights into flow stability and identifying loci for instability initiation and chaos. FEGC 1.0 provides a robust algorithm for detailed energy gradient analysis in fluid dynamics, particularly in two-dimensional fields. However, it faces challenges such as limited scalability, lack of a graphical user interface (GUI), and restricted integration with other tools. Future developments will address these limitations, enhancing scalability, adding a GUI, and expanding applicability to three-dimensional flow fields.
流动能量梯度计算器 (FEGC) 是一种基于 Fortran 的工具,旨在通过计算能量梯度比分析流体的不稳定性,从而深入了解流动稳定性并确定不稳定性的起始和混乱位置。FEGC 1.0 为流体动力学中的详细能量梯度分析,特别是二维场中的能量梯度分析提供了一种强大的算法。然而,它也面临着可扩展性有限、缺乏图形用户界面(GUI)以及与其他工具集成受限等挑战。未来的发展将解决这些局限性,提高可扩展性,增加图形用户界面,并将适用范围扩大到三维流场。
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引用次数: 0
Enhanced leaf disease detection: UNet for segmentation and optimized EfficientNet for disease classification 增强叶片病害检测:用于分割的 UNet 和用于病害分类的优化 EfficientNet
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-09-14 DOI: 10.1016/j.simpa.2024.100701
Jameer Kotwal , Ramgopal Kashyap , Pathan Mohd Shafi , Vinod Kimbahune
This manuscript delineates the code developed for a published scholarly article aimed at supporting researchers in addressing plant leaf disease detection and classification (PLDC) challenges while evaluating the efficacy of various deep learning models. Furthermore, the research incorporates preprocessing strategies, correlation, segmentation employing the UNet model, feature extraction methods and EfficientNet model. The software model generates graphs such as confusion matrix, ROC curve (Receiver Operating Characteristic), and visual representations of loss and accuracy graphs. The initial research was disseminated in the Multimedia Tools and Applications journal, and the accompanying dataset was also introduced in the Data in Brief journal.
本手稿描述了为一篇已发表的学术文章开发的代码,旨在支持研究人员应对植物叶片病害检测和分类(PLDC)挑战,同时评估各种深度学习模型的功效。此外,该研究还纳入了预处理策略、相关性、采用 UNet 模型的分割、特征提取方法和 EfficientNet 模型。软件模型可生成混淆矩阵、ROC 曲线(Receiver Operating Characteristic)等图形,以及损失和准确率图形的可视化表示。最初的研究成果在《多媒体工具与应用》期刊上发表,随附的数据集也在 《Data in Brief》期刊上介绍。
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引用次数: 0
FlowTransformer: A flexible python framework for flow-based network data analysis 流量转换器基于流量的网络数据分析的灵活 python 框架
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-09-07 DOI: 10.1016/j.simpa.2024.100702
Liam Daly Manocchio, Siamak Layeghy, Marius Portmann

FlowTransformer is a software framework tailored for building Machine Learning based Network Intrusion Detection Systems (NIDSs) leveraging transformer architectures known for their effectiveness in both NLP and more broadly for handling sequences of data. FlowTransformer is a flexible pipeline composed of a definable dataset definition, efficient preprocessing, and a flexible model construction, supporting different input-encodings, transformer models and classification heads. Furthermore, users can extend the framework by defining their own components. FlowTransformer’s contribution lies in its easy customisation, and ability to leverage transformers to enable enhanced long-term pattern detection, offering cybersecurity researchers and practitioners a valuable tool.

FlowTransformer 是一个软件框架,专为构建基于机器学习的网络入侵检测系统(NIDS)而设计,它利用了在 NLP 和更广泛的数据序列处理方面以高效著称的转换器架构。FlowTransformer 是一个灵活的管道,由可定义的数据集定义、高效的预处理和灵活的模型构建组成,支持不同的输入编码、转换器模型和分类头。此外,用户还可以通过定义自己的组件来扩展该框架。FlowTransformer 的贡献在于它易于定制,并能利用转换器实现增强的长期模式检测,为网络安全研究人员和从业人员提供了一个宝贵的工具。
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引用次数: 0
CALDINTAV: A simple software for dynamic analysis of high-speed railway bridges using the semi-analytical modal method CALDINTAV:采用半解析模态法对高速铁路桥梁进行动态分析的简易软件
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-09-07 DOI: 10.1016/j.simpa.2024.100700
Khanh Nguyen , José M. Goicolea

The increasing prevalence of high-speed trains necessitates robust analysis tools to ensure the safety and reliability of railway bridges. This paper presents a user-friendly software application designed for the dynamic analysis of railway bridges subjected to high-speed train loadings. Leveraging the semi-analytical modal method, the software offers a balanced approach that combines computational efficiency with high accuracy. Key features include an intuitive interface, rapid analysis capabilities, and reliable prediction of bridge responses, facilitating design optimization and maintenance planning. This software is poised to become an indispensable tool for structural engineers, researchers, and infrastructure planners.

随着高速列车的日益普及,需要强有力的分析工具来确保铁路桥梁的安全性和可靠性。本文介绍了一款用户友好型应用软件,专门用于对承受高速列车荷载的铁路桥梁进行动态分析。利用半解析模态法,该软件提供了一种兼顾计算效率和高精度的方法。其主要特点包括直观的界面、快速的分析能力和可靠的桥梁响应预测,有助于设计优化和维护规划。该软件有望成为结构工程师、研究人员和基础设施规划人员不可或缺的工具。
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引用次数: 0
QF-LCS: Quantum Field Lens Coding Simulator and Game Tool for Strong System State Predictions QF-LCS:用于强系统状态预测的量子场透镜编码模拟器和游戏工具
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-09-04 DOI: 10.1016/j.simpa.2024.100703
Philip Baback Alipour, Thomas Aaron Gulliver

A quantum field lens coding simulator (QF-LCS) is presented on a high-level end-user application software run by CLI GUI with custom commands input by the user to process, analyze, validate QF-LC algorithm (QF-LCA) datasets in a QF-LC Python game. On the low-level system software, measurement data are acquired from quantum computers. The datasets contain these measurement data, processed and classified according to QF-LCA circuit design and steps determining system states and their prediction. This software, impacts advances made in applied sciences, statistics, law and physics, where data validation of samples including system simulation projecting and predicting events are achieved.

量子场透镜编码模拟器(QF-LCS)是一个高级终端用户应用软件,通过 CLI ⟷ GUI 运行,用户输入自定义命令,在 QF-LC Python 游戏中处理、分析、验证 QF-LC 算法(QF-LCA)数据集。在底层系统软件中,测量数据来自量子计算机。数据集包含这些测量数据,并根据确定系统状态及其预测的 QF-LCA 电路设计和步骤进行处理和分类。该软件对应用科学、统计学、法学和物理学的进步产生了影响,实现了包括系统模拟预测事件在内的样本数据验证。
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引用次数: 0
Assessing and improving the quality of Fortran code in scientific software: FortranAnalyser 评估和改进科学软件中 Fortran 代码的质量:FortranAnalyser
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-09-01 DOI: 10.1016/j.simpa.2024.100692
Michael García-Rodríguez , Juan A. Añel , Javier Rodeiro-Iglesias

Despite its age, Fortran remains essential in many scientific fields. Ensuring code quality in long-term projects with evolving standards is critical, but few tools analyse Fortran, and they are not free. We present FortranAnalyser, a multi-platform, static analysis tool designed to enhance Fortran code quality. This paper outlines its development, features, and comparison with other tools. Additionally, we demonstrate its effectiveness through real-world applications, such as improving the Fortran code in a major global climate model.

尽管年代久远,Fortran 仍然是许多科学领域必不可少的工具。在标准不断发展的长期项目中,确保代码质量至关重要,但分析 Fortran 的工具却很少,而且还不是免费的。我们推出的 FortranAnalyser 是一款多平台静态分析工具,旨在提高 Fortran 代码质量。本文概述了它的开发、功能以及与其他工具的比较。此外,我们还通过实际应用证明了它的有效性,例如改进了一个主要全球气候模型中的 Fortran 代码。
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引用次数: 0
qlty: Handling large tensors in scientific imaging deep-learning workflows qlty:在科学成像深度学习工作流程中处理大型张量
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-08-26 DOI: 10.1016/j.simpa.2024.100696
Petrus H. Zwart

In scientific imaging, deep learning has become a pivotal tool for image analytics. However, handling large volumetric datasets, which often exceed the memory capacity of standard GPUs, require special attention when subjected to deep learning efforts. This paper introduces qlty, a toolkit designed to address these challenges through tensor management techniques. qlty offers robust methods for subsampling, cleaning, and stitching of large-scale spatial data, enabling effective training and inference even in resource-limited environments.

在科学成像领域,深度学习已成为图像分析的重要工具。然而,处理大型体积数据集通常会超出标准 GPU 的内存容量,因此在进行深度学习时需要特别注意。qlty 提供了对大规模空间数据进行子采样、清理和拼接的强大方法,即使在资源有限的环境中也能进行有效的训练和推理。
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引用次数: 0
SpectroChat: A windows executable graphical user interface for chemometrics analysis of spectroscopic data SpectroChat:用于光谱数据化学计量学分析的窗口可执行图形用户界面
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-08-23 DOI: 10.1016/j.simpa.2024.100698
Md. Toukir Ahmed, Md Wadud Ahmed, Mohammed Kamruzzaman

“SpectroChat”, a user-friendly, windows-based graphical user interface (GUI) for chemometric analysis, is designed to avoid the complexity of high-level programming and expensive software subscriptions. Developed in Python, this software offers versatile data partitioning, spectral pre-processing, and an optimizable genetic algorithm (GA) for feature selection for spectroscopic data analysis. SpectroChat enables the execution of multivariate regression analyses with options for hyperparameter adjustments and saving model diagnostics. This open-source software, designed to alleviate resource constraints, streamlines chemometric studies without requiring advanced programming platforms.

"SpectroChat "是一款用户友好、基于视窗的图形用户界面(GUI),用于化学计量分析,旨在避免高级编程的复杂性和昂贵的软件订阅。该软件使用 Python 开发,提供多功能数据分区、光谱预处理和可优化的遗传算法(GA),用于光谱数据分析的特征选择。SpectroChat 可执行多变量回归分析,并提供超参数调整和保存模型诊断的选项。这款开源软件旨在缓解资源限制,无需高级编程平台即可简化化学计量学研究。
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引用次数: 0
PixSim: Enhancing high-resolution large-scale forest simulations PixSim:增强高分辨率大尺度森林模拟
IF 1.3 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING Pub Date : 2024-08-22 DOI: 10.1016/j.simpa.2024.100695
Nicolas Cattaneo, Rasmus Astrup, Clara Antón-Fernández

PixSim is a flexible, open-source forest growth simulator designed to operate at the pixel level of high-resolution, wall-to-wall forest resource maps generated through remote sensing approaches. PixSim addresses the need to adapt forest growth simulators to the data produced by modern remote sensing-based forest inventories, rather than relying on stand-level averages from traditional field-based inventories. By operating at the pixel level, PixSim captures intra-stand variability in high-resolution forest resource maps, which is often overlooked by stand-level simulators. This capability aligns with the current focus on precision forestry, aimed at improving management decisions with localized data and small-scale management. Implemented in the R programming language, PixSim features minimal package dependencies, provides flexibility and scalability, and has been optimized for high-resolution, large-scale simulations, ensuring efficient computation. The simulator’s flexibility and open-source nature support the incorporation of management modules and the inclusion of climate change scenarios in simulations.

PixSim 是一种灵活的开源森林生长模拟器,设计用于在通过遥感方法生成的高分辨率、满墙森林资源地图的像素级上运行。PixSim 解决了森林生长模拟器与基于遥感的现代森林资源调查所产生的数据相适应的问题,而不是依赖于传统的基于实地调查的林分平均值。通过像素级操作,PixSim 可捕捉高分辨率森林资源地图中的林分内部变化,而林分级模拟器往往会忽略这一点。这一功能与当前对精准林业的关注相吻合,旨在通过本地化数据和小规模管理改进管理决策。PixSim 使用 R 编程语言实现,具有最小的软件包依赖性、灵活性和可扩展性,并针对高分辨率、大规模模拟进行了优化,以确保高效计算。该模拟器的灵活性和开源性支持在模拟中加入管理模块和气候变化情景。
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引用次数: 0
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Software Impacts
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