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Effect assessment of Parkinson disease on default mode network of the brain with ICA and SCA methods in Resting State FMRI data 静息状态FMRI数据中ICA和SCA方法评估帕金森病对大脑默认模式网络的影响
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752056
M. Ghasemi, A. Mahloojifar, M. Zarei
Parkinson's disease (PD) is a progressive neurological disorder characterized by tremor, rigidity, and slowness of movements. Determining changes of spontaneous activity and connectivity of the brain is a critical step towards treatment of PD patients. Resting State functional Magnetic Resonance Imaging (RS-fMRI) is a non-invasive method that we use in this work to investigate changes of default mode network of the brain in PD. To this end, we apply two methods, Seed Correlation Analysis (SCA) and probabilistic independent Component Analysis (PICA). The results of advanced statistical group analysis on SCA values show that there is negative significant correlation between motor cortex and cerebellum in healthy, while this connection in PD is positive and not significant. This result implies the disturbance of equilibrium function of the brain in resting. Moreover, in both groups, there is significant positive correlation between areas located in basal ganglia. The results show that in healthy, there is not significant correlation between motor areas and basal ganglia, while in PD there are significant negative correlations between motor cortex and cerebellum with areas located in basal ganglia. The comparison of five ICs extracted by PICA showed lower DMN activation in basal ganglia. Finally, The result of our study show that the functional correlations between ROIs are more affected in PD than pattern maps of activity by PICA.
帕金森氏病(PD)是一种进行性神经系统疾病,以震颤、僵硬和运动缓慢为特征。确定大脑自发活动和连通性的变化是治疗PD患者的关键一步。静息状态功能磁共振成像(RS-fMRI)是研究PD患者大脑默认模式网络变化的一种非侵入性方法。为此,我们采用种子相关分析(SCA)和概率独立成分分析(PICA)两种方法。高级组间SCA值的统计分析结果显示,健康人的运动皮质与小脑呈显著负相关,而PD患者的运动皮质与小脑呈显著正相关。这一结果暗示了大脑在休息时平衡功能的紊乱。此外,在两组中,基底节区之间存在显著的正相关。结果显示,健康人的运动区与基底节区无显著相关,而PD患者的运动皮质与小脑与基底节区有显著负相关。PICA提取的5种ic的比较显示基底节区DMN的激活较低。最后,我们的研究结果表明,在PD中,roi之间的功能相关性比PICA的活动模式图更受影响。
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引用次数: 0
Effects of head geometry and coil position on field distribution under transcranial magnetic stimulation 经颅磁刺激下头部几何形状和线圈位置对磁场分布的影响
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752158
Salman Shahid, P. Wen, T. Ahfock, J. Leis
In this study the effects of a realistic head geometry and coil position on the spatial distribution of induced electric field, under TMS, have been investigated using statistical modalities such as RDM, MAG and CC. It has also been observed that the secondary electric field, caused by the asymmetry of the geometry, leads to a dramatic drop in E-field magnitude, deviation in field focality and accelerates its decay. The results show that the head geometry and coil position play a significant role in shaping the spatial distribution of induced electric field.
本研究利用RDM、MAG和CC等统计模型研究了实际头部几何形状和线圈位置对经颅磁刺激下感应电场空间分布的影响,并观察到由几何形状不对称引起的二次电场会导致电场大小急剧下降、场焦偏离并加速其衰减。结果表明,磁头几何形状和线圈位置对感应电场的空间分布有重要影响。
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引用次数: 2
Automatic detection of abnormalities in lung radiographs caused by planocellular lung cancer 肺平细胞肺癌x线片异常的自动检测
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752067
V. Zeljkovic, M. Bojic
We propose in this paper automatic algorithm for early planocellular lung cancer detection in lung X ray images. Considering the fact that lung cancer is one of the most lethal cancers and that it is usually diagnosed too late, the solution is to attempt early diagnosis at general practitioners level, using cheapest diagnostic tools, chest radiography. The proposed algorithm determines and segments the suspected area in lung X ray images. It consists of two steps: comparison between extracted planocellular lung cancer structure and the analyzed lung X ray image by calculating similarity coefficients and finding the maximum similarity coefficient which will indicate the suspected cancer affected area in the lung image. The obtained results are promising and confirm that the proposed algorithm should serve as the foundation for future research in this area.
本文提出了一种基于肺X线图像的早期扁平细胞肺癌自动检测算法。考虑到肺癌是最致命的癌症之一,而且通常诊断得太晚,解决办法是尝试在全科医生层面进行早期诊断,使用最便宜的诊断工具,胸部x线摄影。该算法对肺部X线图像中的可疑区域进行确定和分割。它包括两个步骤:将提取的平面细胞肺癌结构与分析的肺X线图像进行比较,计算相似系数,并找到最大的相似系数,该相似系数表示肺图像中疑似癌症的影响区域。得到的结果是有希望的,并证实了该算法可以作为该领域未来研究的基础。
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引用次数: 6
Knee laxity after unicompartmental joint replacement: A planar mathematical analysis 单腔关节置换术后膝关节松弛:平面数学分析
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752155
A. Imran
Passive knee laxity is an important clinical measure to assess function after joint replacement. Clinical observations suggest that the use of minimally invasive surgical techniques in knee arthroplasty may affect the surgeon's ability to orient and position the prosthetic components accurately. Further, recent studies suggest that malplaced prosthetic components in unicompartmental knee replacement (UKR) can affect the ligament forces and, hence, the knee laxity. In the present study, a sagittal plane mathematical model of the knee with unicompartmental replacement is used to analyze the passive antero-posterior (A-P) laxity during flexion using different force levels. Also, the effects of errors in component position are evaluated. The results show that for all force levels, the A-P laxity first increases from 0° to about 30° flexion, remains nearly constant for another 10° and then decreases somewhat linearly for higher flexion angles. Changes in the position of the femoral component by 1mm can affect the knee laxity by 2mm or more in some flexion positions. The analysis has clinical relevance and suggests that the UKR requires close attention to component placement.
被动膝关节松弛是评估关节置换术后功能的重要临床指标。临床观察表明,在膝关节置换术中使用微创手术技术可能会影响外科医生准确定位和定位假体部件的能力。此外,最近的研究表明,单室膝关节置换术(UKR)中假体部件错位会影响韧带受力,从而导致膝关节松弛。在本研究中,采用单腔置换术的膝关节矢状面数学模型来分析不同力水平下屈曲时的被动前后(a -p)松弛。同时,对元件位置误差的影响进行了分析。结果表明,在所有受力水平下,A-P松弛度首先从0°挠曲增加到30°左右,再增加10°,松弛度基本保持不变,然后随着挠曲角度的增加,松弛度呈线性下降。股骨假体位置改变1mm,在某些屈曲位置会影响膝关节松弛2mm或更多。该分析具有临床相关性,并提示UKR需要密切关注组件放置。
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引用次数: 3
Electrical analog model of arterial compliance during reactive hyperemia 反应性充血期间动脉顺应性的电模拟模型
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752062
Layli S. Goldoozian, E. Zahedi
Flow mediated dilation (FMD) measurement using ultrasound imaging (FMD-US) has been established as a standard method for assessing the endothelial function. Recently, a less skilled-operator demanding method has been proposed based on the photoplethysmogram (PPG) changes during reactive hyperemia. It was shown that the amplitude of the PPG pulse (FMD-PPG) changed in a quite similar manner to that of the artery diameter in the method of the FMD-US i.e. increases following releasing the cuff and then gradually returns to baseline. In this study PPG changes following reactive hyperaemia were modelled using time-varying passive electrical elements (R, L and C). The output of the electric analog model matched relatively well (fitness of 82.47%) the PPG-AC signal.
利用超声成像(FMD- us)测量血流介导扩张(FMD)已被确立为评估内皮功能的标准方法。最近,根据反应性充血时的光容积描记图(PPG)变化,提出了一种操作技术要求较低的方法。结果表明,在FMD-US方法中,PPG脉冲(FMD-PPG)的振幅变化与动脉直径变化的方式非常相似,即释放袖带后增加,然后逐渐恢复到基线。本研究采用时变无源电元件(R、L和C)模拟反应性充血后PPG的变化。电模拟模型输出与PPG- ac信号匹配较好(适应度为82.47%)。
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引用次数: 4
Evaluation of effect cardiac resynchronization therapy 心脏再同步化治疗效果评价
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752120
J. Pindor, M. Penhaker, J. Cernohorský, D. Korpas, V. Vancura
Today, the many instruments for various signal processing are important component of medical practice. This study proposes the application, which can be useful in determination of ECG changes of patients with cardiac resynchronization therapy. The application, created in MATLAB, is based on algorithms, which are derived from mathematical functions and wavelet transform. We test the application on patients' data of cardiology clinic of hospital IKEM in Prague and we made great experimental results.
今天,许多用于各种信号处理的仪器是医疗实践的重要组成部分。本研究提出的应用,可用于确定心脏再同步化治疗患者的心电图变化。该应用程序是在MATLAB中创建的,基于数学函数和小波变换导出的算法。我们对布拉格IKEM医院心内科门诊的患者数据进行了测试,取得了很好的实验效果。
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引用次数: 1
A novel approach for wave segments in ECG by wavelet analysis 基于小波分析的心电波段分析新方法
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752072
N. Sundararajan, S. Farook, N. Vasudha
A wavelet transform based ECG analysis for precise location of P wave, QRS complex and T wave is presented. Detection of such waves in an ECG is difficult due to the time varying morphology of the signal in addition to the presence of various noise factors. The results of reliable location of P, QRS and T wave of a hypertensive ECG using continuous Wavelet transformation (CWT) which is more appropriate and accurate measure of the ECG pattern is presented and the salient features are discussed.
提出了一种基于小波变换的心电分析方法,对P波、QRS复波和T波进行精确定位。由于信号的时变形态以及各种噪声因素的存在,在ECG中检测这种波是困难的。本文介绍了用连续小波变换(CWT)对高血压心电图的P波、QRS波和T波进行可靠定位的结果,并对其显著特征进行了讨论。
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引用次数: 2
Motion-tolerant pulse oximetry based on the wavelet transformation and adaptive peak filtering 基于小波变换和自适应峰值滤波的运动容忍脉搏血氧测量
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752131
S. Andruschenko, U. Timm, J. Kraitl, Elfed Lewis, Hartmut Ewald
A novel motion-tolerant algorithm for continuous real-time monitoring of blood constituents by means of pulse oximetry is introduced. Motion artifacts frequently lead to false interpretations of the measured signal or can cause a failure of the signal detection. Therefore these disturbances are required to be recognized and suppressed while the useful signal should remain possibly unaffected. The technique is based on the continuous wavelet analysis combined with optional adaptive peak filtering to optimally estimate the physiological parameters. Presented algorithm appears to be a sensitive nonlinear method of processing the pulsative arrhythmic patterns in frequency domain. Reconstruction of the motion-corrupted PPG-waveform could allow an elicitation of the individual clinical parameters which yield additional data about the human health status. The method is not limited to non-invasive oximetry only and can be utilized in other medical fields of patient monitoring.
介绍了一种基于脉搏血氧仪连续实时监测血液成分的运动容忍算法。运动伪影经常导致对测量信号的错误解释或导致信号检测失败。因此,这些干扰需要被识别和抑制,而有用的信号应该保持可能不受影响。该方法基于连续小波分析,结合可选的自适应峰值滤波,对生理参数进行最优估计。该算法是一种在频域处理脉动型心律失常的灵敏非线性方法。运动破坏的ppg波形的重建可以使个体临床参数的启发,从而产生关于人类健康状况的额外数据。该方法不仅限于无创血氧测量,还可用于其他医学领域的患者监测。
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引用次数: 1
Finding protein active sites using approximate sub-graph isomorphism 利用近似子图同构寻找蛋白质活性位点
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752157
Mohammad Ebrahim Abbasi Dezfouli, S. Arab, E. Fatemizadeh, Najmeh Hosseynimanesh
Prediction of the amino acids that have a catalytic effect on the enzymes is a major stage in appointing the activity of the enzymes and classification. The biological activity of a protein usually depends on the existence of a small number of amino acids. Recently, many algorithms have been proposed in the literature for finding these amino acids which are complex and time consuming. In this paper, we will introduce a new method for predicting the active sites that will use the spatial coordinates and the type of amino acids that contain the active sites. In order to increase the speed we use an approximate graph isomorphism algorithm. Furthermore, this algorithm allows us to find several active sites for a protein and order them according to a RMSD (Root Mean Square Deviation) number which has several applications in biology.
预测对酶有催化作用的氨基酸是确定酶的活性和分类的重要环节。蛋白质的生物活性通常依赖于少量氨基酸的存在。近年来,文献中提出了许多算法来寻找这些复杂且耗时的氨基酸。在本文中,我们将介绍一种利用空间坐标和含有活性位点的氨基酸类型预测活性位点的新方法。为了提高速度,我们使用了近似图同构算法。此外,该算法允许我们找到蛋白质的几个活性位点,并根据RMSD(均方根偏差)数对它们进行排序,RMSD在生物学中有几种应用。
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引用次数: 0
Green synthesis of well-defined spherical PbS quantum dots and its potential in biomedical imaging research and biosensing 定义良好的球形PbS量子点的绿色合成及其在生物医学成像研究和生物传感中的潜力
Pub Date : 2011-04-19 DOI: 10.1109/MECBME.2011.5752075
M. Mozafari, F. Moztarzadeh
In this research, we present a facile, effective and green route for the synthesis of well-defined spherical lead sulfide (PbS) quantum dots (QDs) through the reaction between lead nitrate and sodium sulphide by virtue of its strong reduction and selective interaction abilities without using any surfactant, and evaluate its potential for use in biomedical imaging and biosensing applications. The average crystallite size using Scherrer's formula was about 13 nm and the calculated lattice constant using Bragg's equation was 0.5950 nm, which was very close to the value in the standard card JCPDS file No. 5–592, and the crystal structure of PbS QDs was in its cubic phase. The synthesized particles had well-defined spherical morphology, and the photoluminescence (PL) study showed that the emission spectrum was a strong and narrow band with high intensity which confirmed the high-quality luminescence properties of the prepared PbS QDs. A possible formation mechanism of the PbS QDs and its Potential in Biomedical Imaging Research and Biosensing has also been put forward and discussed.
在这项研究中,我们提出了一种简单、有效和绿色的方法,利用硝酸铅和硫化钠之间的反应,利用其强大的还原和选择性相互作用能力,在不使用任何表面活性剂的情况下合成明确定义的球形硫化铅(PbS)量子点(QDs),并评估了其在生物医学成像和生物传感应用中的潜力。用Scherrer公式计算得到的平均晶粒尺寸约为13 nm,用Bragg方程计算得到的晶格常数为0.5950 nm,与标准卡片JCPDS文件5-592中的值非常接近,PbS量子点的晶体结构为立方相。合成的粒子具有清晰的球形形貌,光致发光(PL)研究表明,其发射光谱具有强而窄的高强度,证实了制备的PbS量子点具有良好的发光性能。提出了PbS量子点的可能形成机制,并对其在生物医学成像研究和生物传感中的应用潜力进行了探讨。
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引用次数: 4
期刊
2011 1st Middle East Conference on Biomedical Engineering
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