首页 > 最新文献

Journal of Dairy Science最新文献

英文 中文
Genomic regions affecting perinatal and early life survival in dairy calves. 影响奶牛围产期和早期生命存活的基因组区域。
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-26750
M M Axford, M Khansefid, I M MacLeod, T V Nguyen, I van den Berg, M Haile-Mariam, M E Goddard, A J Chamberlain, J E Pryce
<p><p>Calves that survive and thrive are important to the productivity of dairy herds through their role as potential herd replacements or as a source of livestock trading income. Conversely, calf losses are costly, leading to poorer farm productivity and welfare outcomes. Stillbirths (SB) are calvings where the calf dies near birth. Preweaning mortality (PWM) describes calves that are born alive but die before weaning. Improving SB and PWM can be achieved through conventional quantitative trait selection strategies, but these traits, especially SB, can sometimes occur because of a single large-effect recessive deleterious mutation. Identifying the causal variant enables carrier screening, improves predictions by reducing the risk of eroding linkage disequilibrium between tagging SNP markers and the variant, and enables the variant to be added to new genotyping panels. The dataset used in this study is ideally suited to exploring deleterious loci because both dead and alive calves are included, so if there were early life deaths because of a single deleterious variant, we may be able to detect them. Furthermore, because these diseases generally arise due to recent inbreeding, identification of runs of homozygosity around these loci could be useful to identify recessive lethal haplotypes and their common ancestral origin. The objective of this study was to identify regions of the genome that were associated with SB and PWM, as well as runs of homozygosity (ROH), in order to reveal whether region-specific inbreeding was negatively affecting these traits. We first conducted a GWAS using SB and PWM adjusted phenotypes for 11,525 Holstein and 1,272 Jersey calves and their genotypes imputed to the whole genome sequence. Phenotypes were adjusted for herd-year-season, sex, parity and calving ease. Our GWAS results suggest that SB and PWM are polygenic traits, as 198 significant variants were detected in many independent regions. The maximum effect sizes resulted in 14% more SB in Holstein, 20% more SB in Jersey, and 4% higher PWM in Holstein calves. To explore the impact of homozygous genomic regions that could arise through inbreeding (ROH) on SB and PWM, we used Haplofinder to scan for unfavorable haplotypes. We found 243 haplotypes of about ∼2 Mbp in length that were associated with increased SB and PWM when found in the homozygous state. Of these, 4 haplotypes also contained a significant GWAS variant, with nearby genes including the myostatin gene (MSTN), BIN1, and FER1L5. We found regions on BTA4, BTA19, and BTA22 that were previously reported to be associated with SB and a new region of BTA2 where ROH had deleterious consequences. Genes of interest that are located in these regions include MKS1 (linked to lethal malformation in infants), MYH3 (linked to growth, carcass traits, and embryonic development), FHIT (important for energy transfer, signaling, and stress response) and THSD7A (linked to cytoskeletal organization). These results contribute t
存活和茁壮成长的小牛对奶牛群的生产力至关重要,因为它们可以作为潜在的牛群替代品或牲畜贸易收入的来源。相反,小牛的损失代价高昂,导致农业生产力和福利结果下降。死产(SB)是幼崽在出生时死亡的现象。断奶前死亡率(PWM)是指犊牛出生时活着,但在断奶前死亡。通过传统的数量性状选择策略,可以改善SB和PWM,但这些性状,特别是SB,有时可能是由于单个大效隐性有害突变而产生的。确定因果变异可以进行携带者筛选,通过降低标记SNP标记和变异之间连锁不平衡的风险来改善预测,并使变异能够被添加到新的基因分型面板中。本研究中使用的数据集非常适合于探索有害基因座,因为死亡和活着的小牛都包括在内,所以如果由于单一有害变异而导致早期生命死亡,我们可能能够检测到它们。此外,由于这些疾病通常是由于最近的近亲繁殖引起的,鉴定这些位点周围的纯合性可能有助于鉴定隐性致死单倍型及其共同的祖先起源。本研究的目的是确定与SB和PWM相关的基因组区域,以及纯合性(ROH)的运行,以揭示区域特异性近交是否对这些性状产生负面影响。我们首先使用SB和PWM调节表型对11525头荷斯坦和1272头泽西犊牛及其全基因组序列的基因型进行了GWAS。表型根据群年、季节、性别、胎次和产犊难易程度进行调整。我们的GWAS结果表明SB和PWM是多基因性状,因为在许多独立的区域检测到198个显著变异。最大效应量导致荷斯坦奶牛的SB增加14%,泽西奶牛的SB增加20%,荷斯坦奶牛的PWM增加4%。为了探索近亲繁殖可能产生的纯合基因组区域(ROH)对SB和PWM的影响,我们使用Haplofinder扫描不利的单倍型。我们发现243个长度约为2 Mbp的单倍型在纯合状态下与增加的SB和PWM相关。其中,4个单倍型也含有一个显著的GWAS变体,其附近的基因包括肌生长抑制素基因(MSTN)、BIN1和FER1L5。我们在BTA4、BTA19和BTA22上发现了先前报道的与SB相关的区域,以及BTA2上一个新的区域,在那里ROH会产生有害的后果。位于这些区域的相关基因包括MKS1(与婴儿致命畸形有关)、MYH3(与生长、胴体性状和胚胎发育有关)、FHIT(对能量转移、信号传导和应激反应很重要)和THSD7A(与细胞骨架组织有关)。这些结果有助于加深对影响奶牛早期生命存活的遗传控制的理解。
{"title":"Genomic regions affecting perinatal and early life survival in dairy calves.","authors":"M M Axford, M Khansefid, I M MacLeod, T V Nguyen, I van den Berg, M Haile-Mariam, M E Goddard, A J Chamberlain, J E Pryce","doi":"10.3168/jds.2025-26750","DOIUrl":"https://doi.org/10.3168/jds.2025-26750","url":null,"abstract":"&lt;p&gt;&lt;p&gt;Calves that survive and thrive are important to the productivity of dairy herds through their role as potential herd replacements or as a source of livestock trading income. Conversely, calf losses are costly, leading to poorer farm productivity and welfare outcomes. Stillbirths (SB) are calvings where the calf dies near birth. Preweaning mortality (PWM) describes calves that are born alive but die before weaning. Improving SB and PWM can be achieved through conventional quantitative trait selection strategies, but these traits, especially SB, can sometimes occur because of a single large-effect recessive deleterious mutation. Identifying the causal variant enables carrier screening, improves predictions by reducing the risk of eroding linkage disequilibrium between tagging SNP markers and the variant, and enables the variant to be added to new genotyping panels. The dataset used in this study is ideally suited to exploring deleterious loci because both dead and alive calves are included, so if there were early life deaths because of a single deleterious variant, we may be able to detect them. Furthermore, because these diseases generally arise due to recent inbreeding, identification of runs of homozygosity around these loci could be useful to identify recessive lethal haplotypes and their common ancestral origin. The objective of this study was to identify regions of the genome that were associated with SB and PWM, as well as runs of homozygosity (ROH), in order to reveal whether region-specific inbreeding was negatively affecting these traits. We first conducted a GWAS using SB and PWM adjusted phenotypes for 11,525 Holstein and 1,272 Jersey calves and their genotypes imputed to the whole genome sequence. Phenotypes were adjusted for herd-year-season, sex, parity and calving ease. Our GWAS results suggest that SB and PWM are polygenic traits, as 198 significant variants were detected in many independent regions. The maximum effect sizes resulted in 14% more SB in Holstein, 20% more SB in Jersey, and 4% higher PWM in Holstein calves. To explore the impact of homozygous genomic regions that could arise through inbreeding (ROH) on SB and PWM, we used Haplofinder to scan for unfavorable haplotypes. We found 243 haplotypes of about ∼2 Mbp in length that were associated with increased SB and PWM when found in the homozygous state. Of these, 4 haplotypes also contained a significant GWAS variant, with nearby genes including the myostatin gene (MSTN), BIN1, and FER1L5. We found regions on BTA4, BTA19, and BTA22 that were previously reported to be associated with SB and a new region of BTA2 where ROH had deleterious consequences. Genes of interest that are located in these regions include MKS1 (linked to lethal malformation in infants), MYH3 (linked to growth, carcass traits, and embryonic development), FHIT (important for energy transfer, signaling, and stress response) and THSD7A (linked to cytoskeletal organization). These results contribute t","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581567","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Milk composition shapes structural and microbial dynamics of kefir grain formation: Linking microbiota, metabolites, and grain architecture. 牛奶成分形状结构和开菲尔颗粒形成的微生物动力学:连接微生物群,代谢物和颗粒结构。
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-26986
Sheng-Yao Wang, De-Rong Chih, Yen-Po Chen, Jia-Shian Shiu, Ming-Ju Chen

The objective of this study was to investigate the mechanistic effects of different milk-derived substrates, cow milk, goat milk, and whey protein concentrate (WPC), on the structural development, microbial succession, and metabolite production of kefir grains during 28 d of continuous subculturing. Kefir grain morphology, microbial community dynamics, and substrate-driven metabolic shifts were analyzed using scanning electron microscopy, culture- and sequencing-based microbial profiling, and untargeted metabolomics. Despite initial differences among substrates, Lactobacillus kefiranofaciens became the dominant bacterium across all treatments, contributing to the structural and metabolic foundation of the grains. Its abundance was greatest in goat milk, intermediate in cow milk, and lowest in WPC, corresponding to differences in substrate-derived CN, peptides, and free AA. Fermentation resulted in a decrease in primary nutrients, such as lactose and palmitic acid, and an increase in secondary metabolites, including short-chain fatty acids, glycine, hydroxykynurenine, and 2',4'-dihydroxyacetophenone. These metabolites acted as cross-feeding substrates and ecological modulators, facilitating competitive and cooperative interactions among yeasts (Kazachstania turicensis, Kluyveromyces marxianus) and lactic acid bacteria (Lactobacillus kefiri, Leuconostoc mesenteroides). Substrate-specific microbial-metabolite networks influenced final kefir grain morphology: goat milk promoted filamentous, extracellular polysaccharide-rich grains; cow milk supported compact and stable grains; and WPC produced fragmented structures with altered metabolite profiles. These findings provide insights into microbial-metabolite interdependencies in kefir grain development and suggest strategies for substrate optimization and targeted starter culture design in functional dairy fermentation.

本研究的目的是研究不同的乳源基质,牛奶、羊奶和乳清蛋白浓缩物(WPC)在连续传代培养28 d期间对开菲尔颗粒结构发育、微生物演替和代谢物产生的机理影响。利用扫描电镜、基于培养和测序的微生物谱和非靶向代谢组学分析开菲尔颗粒形态、微生物群落动态和底物驱动的代谢变化。尽管底物之间存在最初的差异,但在所有处理中,乳杆菌成为优势菌,有助于谷物的结构和代谢基础。其丰度在羊奶中最高,在牛奶中居中,在WPC中最低,这与底物来源的CN、肽和游离AA的差异相对应。发酵导致主要营养物质(如乳糖和棕榈酸)的减少,次级代谢物(包括短链脂肪酸、甘氨酸、羟基尿氨酸和2',4'-二羟基苯乙酮)的增加。这些代谢物作为交叉取食底物和生态调节剂,促进酵母菌(turicensis Kazachstania, Kluyveromyces marxianus)和乳酸菌(Lactobacillus kefiri, Leuconostoc mesenteroides)之间的竞争和合作相互作用。底物特异性微生物代谢物网络影响最终的开菲尔颗粒形态:羊奶促进了丝状的、细胞外富含多糖的颗粒;牛奶支持致密稳定的谷物;而WPC则产生了代谢谱改变的碎片化结构。这些发现为了解开菲尔颗粒发育过程中微生物与代谢物的相互依赖关系提供了见解,并为功能性乳制品发酵中的底物优化和目标发酵剂设计提供了策略。
{"title":"Milk composition shapes structural and microbial dynamics of kefir grain formation: Linking microbiota, metabolites, and grain architecture.","authors":"Sheng-Yao Wang, De-Rong Chih, Yen-Po Chen, Jia-Shian Shiu, Ming-Ju Chen","doi":"10.3168/jds.2025-26986","DOIUrl":"https://doi.org/10.3168/jds.2025-26986","url":null,"abstract":"<p><p>The objective of this study was to investigate the mechanistic effects of different milk-derived substrates, cow milk, goat milk, and whey protein concentrate (WPC), on the structural development, microbial succession, and metabolite production of kefir grains during 28 d of continuous subculturing. Kefir grain morphology, microbial community dynamics, and substrate-driven metabolic shifts were analyzed using scanning electron microscopy, culture- and sequencing-based microbial profiling, and untargeted metabolomics. Despite initial differences among substrates, Lactobacillus kefiranofaciens became the dominant bacterium across all treatments, contributing to the structural and metabolic foundation of the grains. Its abundance was greatest in goat milk, intermediate in cow milk, and lowest in WPC, corresponding to differences in substrate-derived CN, peptides, and free AA. Fermentation resulted in a decrease in primary nutrients, such as lactose and palmitic acid, and an increase in secondary metabolites, including short-chain fatty acids, glycine, hydroxykynurenine, and 2',4'-dihydroxyacetophenone. These metabolites acted as cross-feeding substrates and ecological modulators, facilitating competitive and cooperative interactions among yeasts (Kazachstania turicensis, Kluyveromyces marxianus) and lactic acid bacteria (Lactobacillus kefiri, Leuconostoc mesenteroides). Substrate-specific microbial-metabolite networks influenced final kefir grain morphology: goat milk promoted filamentous, extracellular polysaccharide-rich grains; cow milk supported compact and stable grains; and WPC produced fragmented structures with altered metabolite profiles. These findings provide insights into microbial-metabolite interdependencies in kefir grain development and suggest strategies for substrate optimization and targeted starter culture design in functional dairy fermentation.</p>","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581514","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Examining the causal link between cheese intake and susceptibility to type 2 diabetes through metabolic traits: Insights from Mendelian randomization. 通过代谢特征检查奶酪摄入量与2型糖尿病易感性之间的因果关系:来自孟德尔随机化的见解。
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-26097
Yanjiang Yang, Xiaorui Wang, Wenwen Yang

Type 2 diabetes (T2D) is a global metabolic disorder influenced by diet. While cheese consumption has been suggested to protect against T2D, the mediating metabolic pathways remain unclear. Using Mendelian randomization (MR), we analyzed genetic variants associated with cheese intake (UK Biobank) and their effects on T2D risk (FinnGen) via 249 metabolites. Instrumental variables were selected under stringent criteria. Causal estimates were derived via inverse-variance weighted method, with sensitivity analyses (MR-Egger method) and mediation testing. Cheese intake was inversely associated with T2D risk (odds ratio [OR] = 0.616). Of 249 metabolites, 26 mediated this relationship, including triglycerides (e.g., total triglycerides levels, 3.55% mediation), free cholesterol (e.g., free cholesterol levels in high-density lipoprotein, 5.84%), glucose (3.43%), and albumin (2.69%). Among the 66 metabolites identified as T2D-associated, notable examples included: AA (Phe OR = 1.14, Leu OR = 1.22, Val OR = 1.13), ketone bodies (acetoacetate OR = 1.62, 3-hydroxybutyrate OR = 1.36), and protective factors (albumin OR = 0.871, apolipoprotein A1 OR = 0.871). Cheese consumption may lower T2D risk primarily by modulating lipid metabolites (triglycerides, cholesterol esters) and albumin. These findings highlight novel metabolic pathways for dietary prevention of T2D and underscore the need for research on cheese-specific components (e.g., fermentation byproducts).

2型糖尿病(T2D)是一种受饮食影响的全球性代谢紊乱。虽然食用奶酪被认为可以预防T2D,但其介导的代谢途径尚不清楚。使用孟德尔随机化(MR),我们分析了与奶酪摄入量相关的遗传变异(UK Biobank)及其通过249种代谢物对T2D风险的影响(FinnGen)。在严格的标准下选择工具变量。因果估计通过反方差加权法、敏感性分析(MR-Egger法)和中介检验得出。奶酪摄入量与T2D风险呈负相关(优势比[OR] = 0.616)。在249种代谢物中,26种介导了这种关系,包括甘油三酯(例如,总甘油三酯水平,介导3.55%)、游离胆固醇(例如,高密度脂蛋白中的游离胆固醇水平,介导5.84%)、葡萄糖(3.43%)和白蛋白(2.69%)。在与t2d相关的66种代谢物中,AA (Phe OR = 1.14, Leu OR = 1.22, Val OR = 1.13)、酮体(乙酰乙酸OR = 1.62, 3-羟基丁酸OR = 1.36)和保护因子(白蛋白OR = 0.871,载脂蛋白A1 OR = 0.871)是值得注意的。食用奶酪可能主要通过调节脂质代谢物(甘油三酯、胆固醇酯)和白蛋白来降低T2D风险。这些发现强调了饮食预防T2D的新代谢途径,并强调了研究奶酪特定成分(如发酵副产物)的必要性。
{"title":"Examining the causal link between cheese intake and susceptibility to type 2 diabetes through metabolic traits: Insights from Mendelian randomization.","authors":"Yanjiang Yang, Xiaorui Wang, Wenwen Yang","doi":"10.3168/jds.2025-26097","DOIUrl":"https://doi.org/10.3168/jds.2025-26097","url":null,"abstract":"<p><p>Type 2 diabetes (T2D) is a global metabolic disorder influenced by diet. While cheese consumption has been suggested to protect against T2D, the mediating metabolic pathways remain unclear. Using Mendelian randomization (MR), we analyzed genetic variants associated with cheese intake (UK Biobank) and their effects on T2D risk (FinnGen) via 249 metabolites. Instrumental variables were selected under stringent criteria. Causal estimates were derived via inverse-variance weighted method, with sensitivity analyses (MR-Egger method) and mediation testing. Cheese intake was inversely associated with T2D risk (odds ratio [OR] = 0.616). Of 249 metabolites, 26 mediated this relationship, including triglycerides (e.g., total triglycerides levels, 3.55% mediation), free cholesterol (e.g., free cholesterol levels in high-density lipoprotein, 5.84%), glucose (3.43%), and albumin (2.69%). Among the 66 metabolites identified as T2D-associated, notable examples included: AA (Phe OR = 1.14, Leu OR = 1.22, Val OR = 1.13), ketone bodies (acetoacetate OR = 1.62, 3-hydroxybutyrate OR = 1.36), and protective factors (albumin OR = 0.871, apolipoprotein A1 OR = 0.871). Cheese consumption may lower T2D risk primarily by modulating lipid metabolites (triglycerides, cholesterol esters) and albumin. These findings highlight novel metabolic pathways for dietary prevention of T2D and underscore the need for research on cheese-specific components (e.g., fermentation byproducts).</p>","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581575","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Holstein cow milk-derived Lactobacillus plantarum L19 alleviates heat stress-induced liver injury in mice by modulating gut microbiota. 荷斯坦牛乳源性植物乳杆菌L19通过调节肠道菌群减轻小鼠热应激性肝损伤。
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-26920
Jiali Wang, Nanxing Li, Yunjiang Liu, Haohong Zheng, Ruihu Wu, Jingyi Zhang, Yizhou Yang, Xue Yang, Zhijun Zhong, Hualin Fu, Ziyao Zhou, Haifeng Liu, Guangneng Peng

Heat stress-induced liver injury is a common and potentially life-threatening complication of heat exposure in both humans and animals. With the ongoing rise in global temperatures, effective preventive strategies are urgently needed. Lactic acid bacteria have been extensively studied and shown to effectively alleviate various types of liver injury; however, their specific role in heat stress-induced liver damage remains unknown. In our previous work, we isolated Lactobacillus plantarum L19 (LP-19), a strain with strong heat resistance and antioxidant capacity, from Holstein cow milk, suggesting its potential to benefit animals and humans under heat stress. This study aimed to investigate the effects of LP-19 against heat stress-induced liver injury using a mouse model. The results showed that oral administration of LP-19 reduced serum alanine aminotransferase and aspartate aminotransferase levels and inhibited liver oxidative stress in mice with heat-stressed liver injury. Immunohistochemistry and quantitative real-time PCR results showed that LP-19 also reduced levels of heat shock proteins and inflammatory factors. Moreover, LP-19 improved intestinal morphology and modulated gut microbiota by increasing beneficial genera such as Lactobacillus and Dorea while decreasing harmful taxa, including Haemophilus and Desulfovibrionaceae. These changes in the microbiota were closely correlated with therapeutic indices. Functional prediction with PICRUSt2 indicated that the LP-19-regulated microbiota may exert its effects primarily through modulating membrane transport, carbohydrate metabolism, and amino acid metabolism. These findings suggest that LP-19 may help prevent heat stress-induced liver injury by modulating the gut microbiota. Consequently, the study highlights the potential of LP-19 as a novel food additive for preventing heat stress-induced liver injury, offering new prospects for the utilization and the development of cow milk-derived lactic acid bacteria.

在人类和动物中,热应激引起的肝损伤是一种常见的、可能危及生命的热暴露并发症。随着全球气温的持续上升,迫切需要有效的预防战略。乳酸菌已被广泛研究并证明能有效减轻各种类型的肝损伤;然而,它们在热应激引起的肝损伤中的具体作用尚不清楚。在我们之前的工作中,我们从荷斯坦奶牛的牛奶中分离出了一种具有较强耐热性和抗氧化能力的植物乳杆菌L19 (LP-19),这表明它可能对动物和人类在热应激下有益。本研究旨在探讨LP-19对小鼠热应激性肝损伤的影响。结果表明,口服LP-19可降低热应激性肝损伤小鼠血清丙氨酸转氨酶和天冬氨酸转氨酶水平,抑制肝脏氧化应激。免疫组织化学和实时荧光定量PCR结果显示,LP-19还能降低热休克蛋白和炎症因子的水平。此外,LP-19通过增加有益菌群(如乳酸杆菌和Dorea),减少有害菌群(包括Haemophilus和Desulfovibrionaceae),改善肠道形态和调节肠道微生物群。这些微生物群的变化与治疗指标密切相关。PICRUSt2的功能预测表明,lp -19调节的微生物群可能主要通过调节膜转运、碳水化合物代谢和氨基酸代谢来发挥作用。这些发现表明LP-19可能通过调节肠道微生物群来帮助预防热应激引起的肝损伤。因此,本研究强调了LP-19作为一种预防热应激性肝损伤的新型食品添加剂的潜力,为牛奶源性乳酸菌的利用和开发提供了新的前景。
{"title":"Holstein cow milk-derived Lactobacillus plantarum L19 alleviates heat stress-induced liver injury in mice by modulating gut microbiota.","authors":"Jiali Wang, Nanxing Li, Yunjiang Liu, Haohong Zheng, Ruihu Wu, Jingyi Zhang, Yizhou Yang, Xue Yang, Zhijun Zhong, Hualin Fu, Ziyao Zhou, Haifeng Liu, Guangneng Peng","doi":"10.3168/jds.2025-26920","DOIUrl":"https://doi.org/10.3168/jds.2025-26920","url":null,"abstract":"<p><p>Heat stress-induced liver injury is a common and potentially life-threatening complication of heat exposure in both humans and animals. With the ongoing rise in global temperatures, effective preventive strategies are urgently needed. Lactic acid bacteria have been extensively studied and shown to effectively alleviate various types of liver injury; however, their specific role in heat stress-induced liver damage remains unknown. In our previous work, we isolated Lactobacillus plantarum L19 (LP-19), a strain with strong heat resistance and antioxidant capacity, from Holstein cow milk, suggesting its potential to benefit animals and humans under heat stress. This study aimed to investigate the effects of LP-19 against heat stress-induced liver injury using a mouse model. The results showed that oral administration of LP-19 reduced serum alanine aminotransferase and aspartate aminotransferase levels and inhibited liver oxidative stress in mice with heat-stressed liver injury. Immunohistochemistry and quantitative real-time PCR results showed that LP-19 also reduced levels of heat shock proteins and inflammatory factors. Moreover, LP-19 improved intestinal morphology and modulated gut microbiota by increasing beneficial genera such as Lactobacillus and Dorea while decreasing harmful taxa, including Haemophilus and Desulfovibrionaceae. These changes in the microbiota were closely correlated with therapeutic indices. Functional prediction with PICRUSt2 indicated that the LP-19-regulated microbiota may exert its effects primarily through modulating membrane transport, carbohydrate metabolism, and amino acid metabolism. These findings suggest that LP-19 may help prevent heat stress-induced liver injury by modulating the gut microbiota. Consequently, the study highlights the potential of LP-19 as a novel food additive for preventing heat stress-induced liver injury, offering new prospects for the utilization and the development of cow milk-derived lactic acid bacteria.</p>","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581505","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of tannins and additional rumen-protected protein on nitrate responses in dairy cows: Lactational performance, enteric methane emissions, nitrogen utilization, and blood metabolites. 单宁和额外瘤胃保护蛋白对奶牛硝酸盐反应的影响:泌乳性能、肠道甲烷排放、氮利用和血液代谢产物
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-26786
R Peng, S E Räisänen, R Rauch, A Rytz, Y Zhang, X Ma, M A Barrientos-Blanco, K Wang, Z Zeng, W T Yip, M Bobkov, M Z Islam, E Soussan, M Kreuzer, M Niu
<p><p>The objective of this study was to evaluate the effects of nitrate and Acacia mearnsii bark extract (AMT) supplementation; the latter with and without additional rumen-protected rapeseed meal (RPR), on performance, enteric CH<sub>4</sub> emissions, and N partitioning in dairy cows fed a low-CP diet. The additional RPR aimed to counteract tannin-caused depressions of protein digestibility and potential reductions in milk production. Following a 2-wk covariate period, 18 multiparous Holstein cows were subjected to a split-plot design, with 2 main plot treatments (0.67% nitrate in dietary DM or isonitrogenous urea) and 3 subplot treatments arranged in a 3 × 3 Latin square: (1) a corn-silage-based control diet (CON; average 14.3% CP in DM), (2) CON supplemented with 3% of DM AMT containing 60% tannins (AMT), and (3) the AMT diet with an additional 6.4% of DM RPR (AMT+RPR). Measurements included gas emissions using a GreenFeed system and analyses of feed, milk, feces, urine, and blood. Nitrate supplementation improved nitrogen use efficiency (NUE; milk protein N/N intake) by 11% compared with urea, driven by a trend toward increased milk protein N secretion without increasing N intake. It also reduced total N excretion and CH<sub>4</sub> intensity (g/kg ECM) by 12% without affecting CH<sub>4</sub> yield (g/kg DMI) or daily production. Nitrate also increased milk yield by 12% (28 ± 0.6 vs. 25 ± 0.6 kg/d) without affecting ECM or milk composition, and did not increase plasma methemoglobin (1.5% ± 0.42% vs. 1.4% ± 0.44% as % of hemoglobin, for nitrate, and urea, respectively). In contrast, AMT did not affect CH<sub>4</sub> production, yield, or intensity, but reduced ECM yield (-8%) and NUE (-4%) across urea and nitrate groups. It reduced milk N output by 9% and shifted urinary N excretion to fecal N (+44%; +80 g/d), contributing to a more environmentally favorable N partitioning profile. In addition, AMT decreased digestibility of OM (-17%), CP (-30%), and NDF (-39%) in the urea-fed cows; these reductions were less pronounced (8%, 17%, and 23%, respectively) when nitrate was included. Additional RPR increased dietary CP intake (+10% with nitrate; +6% with urea) but failed to mitigate the adverse effects of AMT on digestibility, milk yield, or NUE. In addition, NUE declined by 10% with AMT+RPR vs. AMT due to increased N intake without improvement in milk N output, suggesting inefficient utilization of the additional protein and potential energy dilution (-4.7% starch in AMT+RPR diets). Additional RPR reversed the reductions in MUN and BUN induced by AMT and elevated urinary (+12%) and fecal (+11%) N excretions. In conclusion, nitrate at 0.67% of dietary DM improved NUE, increased milk yield, and reduced CH<sub>4</sub> intensity without adverse effects on blood methemoglobin or milk nitrate accumulation. Supplementing AMT can be expected to reduce the N emission by redirecting urinary to fecal N losses, but at the cost of NUE and digestibility. With
本研究的目的是评价硝酸盐和金合欢树皮提取物(AMT)的补充效果;后者添加和不添加保护瘤胃油菜籽粕(RPR)对低粗蛋白质饲粮奶牛生产性能、肠道甲烷排放和氮分配的影响。额外的RPR旨在抵消单宁引起的蛋白质消化率下降和潜在的牛奶产量减少。在2周的协变量期后,选取18头多产荷斯坦奶牛,采用分区设计,分为2个主区处理(DM中添加0.67%硝酸盐或等氮尿素)和3个亚区处理(3 × 3拉丁方):(1)以玉米青贮为基础的对照饲粮(CON, DM中平均CP含量为14.3%),(2)CON中添加3%含60%单宁(AMT)的DM AMT, (3) AMT饲粮中添加6.4% DM RPR (AMT+RPR)。测量包括使用GreenFeed系统的气体排放,以及对饲料、牛奶、粪便、尿液和血液的分析。在不增加饲粮氮摄入量的情况下,增加乳蛋白氮分泌,与尿素相比,硝态氮的利用效率(NUE)提高了11%。在不影响CH4产量(g/kg DMI)和日产量的情况下,使总氮排泄量和CH4强度(g/kg ECM)降低12%。在不影响ECM和乳成分的情况下,硝酸盐还能提高12%的产奶量(28±0.6 vs 25±0.6 kg/d),且不增加血浆高铁血红蛋白(硝酸盐和尿素分别占血红蛋白的1.5%±0.42% vs 1.4%±0.44%)。相比之下,AMT对CH4产量、产量和强度没有影响,但尿素和硝酸盐组的ECM产量和氮肥利用效率分别降低了8%和4%。它减少了9%的乳氮排泄量,并将尿氮排泄转化为粪氮(+44%;+80 g/d),有助于更有利于环境的氮分配。此外,AMT降低了尿素饲奶牛对OM(-17%)、CP(-30%)和NDF(-39%)的消化率;当包括硝酸盐时,这些减少不那么明显(分别为8%,17%和23%)。额外的RPR增加了饲粮CP摄入量(硝酸盐+10%,尿素+6%),但未能减轻AMT对消化率、产奶量或氮肥利用率的不利影响。此外,与AMT+RPR相比,AMT+RPR组氮素利用率下降了10%,这是由于氮素摄入量增加而乳氮产量没有改善,表明AMT+RPR组对额外蛋白质和潜在能量稀释(AMT+RPR组淀粉-4.7%)的利用效率低下。额外的RPR逆转了AMT引起的MUN和BUN降低以及尿氮(+12%)和粪氮(+11%)排泄升高。综上所述,饲粮DM中添加0.67%的硝酸盐可提高氮肥利用效率,提高产奶量,降低CH4强度,但对血液高铁血红蛋白和乳硝酸盐积累无不良影响。补充AMT可以通过将尿氮转移到粪氮损失来减少氮排放,但以氮利用效率和消化率为代价。在这种饮食类型中,额外的RPR似乎无法弥补AMT的负面影响。这些发现支持硝酸盐作为一种有希望的策略,可以提高奶牛系统的氮肥利用效率和降低CH4强度,并强调需要进一步研究低cp日粮中单宁-蛋白质相互作用。
{"title":"Effects of tannins and additional rumen-protected protein on nitrate responses in dairy cows: Lactational performance, enteric methane emissions, nitrogen utilization, and blood metabolites.","authors":"R Peng, S E Räisänen, R Rauch, A Rytz, Y Zhang, X Ma, M A Barrientos-Blanco, K Wang, Z Zeng, W T Yip, M Bobkov, M Z Islam, E Soussan, M Kreuzer, M Niu","doi":"10.3168/jds.2025-26786","DOIUrl":"https://doi.org/10.3168/jds.2025-26786","url":null,"abstract":"&lt;p&gt;&lt;p&gt;The objective of this study was to evaluate the effects of nitrate and Acacia mearnsii bark extract (AMT) supplementation; the latter with and without additional rumen-protected rapeseed meal (RPR), on performance, enteric CH&lt;sub&gt;4&lt;/sub&gt; emissions, and N partitioning in dairy cows fed a low-CP diet. The additional RPR aimed to counteract tannin-caused depressions of protein digestibility and potential reductions in milk production. Following a 2-wk covariate period, 18 multiparous Holstein cows were subjected to a split-plot design, with 2 main plot treatments (0.67% nitrate in dietary DM or isonitrogenous urea) and 3 subplot treatments arranged in a 3 × 3 Latin square: (1) a corn-silage-based control diet (CON; average 14.3% CP in DM), (2) CON supplemented with 3% of DM AMT containing 60% tannins (AMT), and (3) the AMT diet with an additional 6.4% of DM RPR (AMT+RPR). Measurements included gas emissions using a GreenFeed system and analyses of feed, milk, feces, urine, and blood. Nitrate supplementation improved nitrogen use efficiency (NUE; milk protein N/N intake) by 11% compared with urea, driven by a trend toward increased milk protein N secretion without increasing N intake. It also reduced total N excretion and CH&lt;sub&gt;4&lt;/sub&gt; intensity (g/kg ECM) by 12% without affecting CH&lt;sub&gt;4&lt;/sub&gt; yield (g/kg DMI) or daily production. Nitrate also increased milk yield by 12% (28 ± 0.6 vs. 25 ± 0.6 kg/d) without affecting ECM or milk composition, and did not increase plasma methemoglobin (1.5% ± 0.42% vs. 1.4% ± 0.44% as % of hemoglobin, for nitrate, and urea, respectively). In contrast, AMT did not affect CH&lt;sub&gt;4&lt;/sub&gt; production, yield, or intensity, but reduced ECM yield (-8%) and NUE (-4%) across urea and nitrate groups. It reduced milk N output by 9% and shifted urinary N excretion to fecal N (+44%; +80 g/d), contributing to a more environmentally favorable N partitioning profile. In addition, AMT decreased digestibility of OM (-17%), CP (-30%), and NDF (-39%) in the urea-fed cows; these reductions were less pronounced (8%, 17%, and 23%, respectively) when nitrate was included. Additional RPR increased dietary CP intake (+10% with nitrate; +6% with urea) but failed to mitigate the adverse effects of AMT on digestibility, milk yield, or NUE. In addition, NUE declined by 10% with AMT+RPR vs. AMT due to increased N intake without improvement in milk N output, suggesting inefficient utilization of the additional protein and potential energy dilution (-4.7% starch in AMT+RPR diets). Additional RPR reversed the reductions in MUN and BUN induced by AMT and elevated urinary (+12%) and fecal (+11%) N excretions. In conclusion, nitrate at 0.67% of dietary DM improved NUE, increased milk yield, and reduced CH&lt;sub&gt;4&lt;/sub&gt; intensity without adverse effects on blood methemoglobin or milk nitrate accumulation. Supplementing AMT can be expected to reduce the N emission by redirecting urinary to fecal N losses, but at the cost of NUE and digestibility. With","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
How can production levels influence decision making on organic dairy farms in Brazil? 生产水平如何影响巴西有机奶牛场的决策?
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-26755
Amanda B Sant'ana, Fernanda S Machado, Fábio H Diniz, Maria F A Pires, Polyana P Rotta, Emília F Ribeiro, Alex L Silva

The aim of this study was to characterize organic dairy systems in Brazil. It was hypothesized that the production level of the herd influences the productivity and marketing aspects of organic milk production systems. A descriptive analysis was carried out in which the variables were geographical location, herd size, animal production, feed used, health and reproduction management, organic inputs used, feed production management, and transportation of products. The characteristics of the systems were evaluated according to the level of production, with farmers divided into 3 groups, with the upper extract comprising farms with an average production of over 16 L/cow per day (HIG), the medium extract with a production between 10.5 and 16 L/cow per day (MED), and the lower extract with an average production of less than 10.5 L/cow per day (LO). The variables were subjected to binomial logistic regression and comparisons were made by odds ratio. The average area of the properties was 107 ha (minimum 3 ha and maximum 1,450 ha); the area for organic milk production was 44 ha (minimum 1 ha and maximum 550 ha). The average daily milk production was 645 L/d (minimum of 12 L/d and maximum of 5,000 L/d), with an average production of 13 L/cow per day (minimum of 4 L/cow per day and maximum of 25 L/cow per day). The herds had an average of 58 cows (minimum 2 cows and maximum 310 cows) and 40 lactating cows (minimum 2 and maximum 255 cows). The average annual production was 7,517 L/ha per year (minimum 21 L/ha per year and maximum 29,877 L/ha per year). The average number of family workers was 2 (minimum 2 and maximum 7); the average number of external workers was 3 (minimum 2 and maximum 16). The HIG and MED farms were found to be 90% less likely to produce cheese. In addition, HIG and MED farms were 10.7 and 6.6 times more likely to have Holstein × Jersey crosses in their herd, respectively. The MED farms were 80% less likely to have Urochloa spp. pastures, whereas HIG farms were 93.2% less likely to have Urochloa spp. pastures and 92% less likely to use chopped grass to supplement the herd. However, the odds of having Megathyrsus maximus pastures was 4.66 times greater for HIG. In addition, HIG farms were 4.5 times more likely to use any type of management software. The analysis of certified organic dairy farms revealed a concentration in the Southeast region of Brazil, where production is mainly focused on milk, whereas other regions have more diversified organic production. The HIG farms are more likely to use specialized cattle breeds, herd supplementation, pastures formed by higher-yielding forage species with greater nutritional value, and management software. These results emphasize the need for public policies that promote the adoption of technological and sustainable practices to increase the efficiency and productivity of the organic dairy sector.

本研究的目的是表征有机乳制品系统在巴西。据推测,畜群的生产水平影响有机牛奶生产系统的生产力和营销方面。进行了描述性分析,变量包括地理位置、畜群规模、动物生产、饲料使用、健康和繁殖管理、使用的有机投入、饲料生产管理和产品运输。根据生产水平对系统的特性进行了评价,将农民分为3组,其中上层榨取物包括平均产量超过16 L/奶牛/天(HIG)的农场,中等榨取物的产量在10.5 - 16 L/奶牛/天(MED)之间,下层榨取物的平均产量低于10.5 L/奶牛/天(LO)。变量采用二项logistic回归,并采用优势比进行比较。这些物业的平均面积为107公顷(最少3公顷,最多1,450公顷);有机牛奶生产面积为44公顷(最小1公顷,最大550公顷)。平均日产奶量为645升/天(最低12升/天,最高5000升/天),平均日产量为13升/头(最低4升/头,最高25升/头)。平均有58头奶牛(最少2头,最多310头)和40头奶牛(最少2头,最多255头)。年平均产量为7517升/公顷(最低21升/公顷,最高29877升/公顷)。家庭工人的平均人数为2人(最少2人,最多7人);外聘工人的平均人数为3人(最少2人,最多16人)。研究发现,HIG和MED农场生产奶酪的可能性要低90%。此外,HIG和MED农场的畜群中荷斯坦与泽西杂交的可能性分别高出10.7倍和6.6倍。MED农场有尿毒虫牧场的可能性减少了80%,而HIG农场有尿毒虫牧场的可能性减少了93.2%,使用切碎的草来补充畜群的可能性减少了92%。然而,对于HIG来说,拥有大巨蝮牧场的几率是4.66倍。此外,HIG农场使用任何类型的管理软件的可能性是其他农场的4.5倍。对经过认证的有机奶牛场的分析显示,有机奶牛场集中在巴西东南部地区,那里的生产主要集中在牛奶上,而其他地区则有更多样化的有机生产。HIG农场更有可能使用专门的牛品种,补充畜群,由营养价值更高的高产饲料品种形成的牧场,以及管理软件。这些结果强调需要制定公共政策,促进采用技术和可持续做法,以提高有机乳制品部门的效率和生产力。
{"title":"How can production levels influence decision making on organic dairy farms in Brazil?","authors":"Amanda B Sant'ana, Fernanda S Machado, Fábio H Diniz, Maria F A Pires, Polyana P Rotta, Emília F Ribeiro, Alex L Silva","doi":"10.3168/jds.2025-26755","DOIUrl":"https://doi.org/10.3168/jds.2025-26755","url":null,"abstract":"<p><p>The aim of this study was to characterize organic dairy systems in Brazil. It was hypothesized that the production level of the herd influences the productivity and marketing aspects of organic milk production systems. A descriptive analysis was carried out in which the variables were geographical location, herd size, animal production, feed used, health and reproduction management, organic inputs used, feed production management, and transportation of products. The characteristics of the systems were evaluated according to the level of production, with farmers divided into 3 groups, with the upper extract comprising farms with an average production of over 16 L/cow per day (HIG), the medium extract with a production between 10.5 and 16 L/cow per day (MED), and the lower extract with an average production of less than 10.5 L/cow per day (LO). The variables were subjected to binomial logistic regression and comparisons were made by odds ratio. The average area of the properties was 107 ha (minimum 3 ha and maximum 1,450 ha); the area for organic milk production was 44 ha (minimum 1 ha and maximum 550 ha). The average daily milk production was 645 L/d (minimum of 12 L/d and maximum of 5,000 L/d), with an average production of 13 L/cow per day (minimum of 4 L/cow per day and maximum of 25 L/cow per day). The herds had an average of 58 cows (minimum 2 cows and maximum 310 cows) and 40 lactating cows (minimum 2 and maximum 255 cows). The average annual production was 7,517 L/ha per year (minimum 21 L/ha per year and maximum 29,877 L/ha per year). The average number of family workers was 2 (minimum 2 and maximum 7); the average number of external workers was 3 (minimum 2 and maximum 16). The HIG and MED farms were found to be 90% less likely to produce cheese. In addition, HIG and MED farms were 10.7 and 6.6 times more likely to have Holstein × Jersey crosses in their herd, respectively. The MED farms were 80% less likely to have Urochloa spp. pastures, whereas HIG farms were 93.2% less likely to have Urochloa spp. pastures and 92% less likely to use chopped grass to supplement the herd. However, the odds of having Megathyrsus maximus pastures was 4.66 times greater for HIG. In addition, HIG farms were 4.5 times more likely to use any type of management software. The analysis of certified organic dairy farms revealed a concentration in the Southeast region of Brazil, where production is mainly focused on milk, whereas other regions have more diversified organic production. The HIG farms are more likely to use specialized cattle breeds, herd supplementation, pastures formed by higher-yielding forage species with greater nutritional value, and management software. These results emphasize the need for public policies that promote the adoption of technological and sustainable practices to increase the efficiency and productivity of the organic dairy sector.</p>","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581536","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Optimal cutoff estimation and evaluation of direct and indirect diagnostic methods for assessing bovine colostrum quality with Bayesian finite mixture models. 用贝叶斯有限混合模型评价牛初乳质量的直接和间接诊断方法的最佳截止估计和评价。
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-20 DOI: 10.3168/jds.2025-27097
Eleftherios Meletis, Juan Carlos Arango-Sabogal, J Trenton McClure, Gregory P Keefe, Polychronis Kostoulas, Ibrahim Elsohaby

Ensuring high-quality colostrum for newborn calves is essential for their health and future productivity. We applied Bayesian finite mixture models to estimate optimal cutoff values and evaluate the diagnostic accuracy of 3 methods-radial immunodiffusion (RID) assay, transmission infrared (TIR) spectroscopy, and digital Brix (dBrix) refractometry-measured on a continuous scale for assessing bovine colostrum quality, using 591 colostrum samples from 42 Holstein dairy herds in Atlantic Canada. The mean and standard deviation of IgG concentrations for high-quality colostrum were 61.07 ± 39.8 g/L, 51.28 ± 27.38 g/L, and 24.32 ± 4.13% Brix for RID assay, TIR spectroscopy, and dBrix refractometry, respectively, compared with 19.93 ± 15.54 g/L, 7.78 ± 37.4 g/L, and 15.87 ± 3.45% Brix for low-quality samples. The prevalence of high-quality colostrum was estimated at 83% (95% credible interval [CrI]: 0.79-0.88). The dBrix refractometer demonstrated the highest discriminatory power, with an area under the curve (AUC) of 0.94 (95% CrI: 0.91-0.97), followed by RID assay (AUC: 0.92; 95% CrI: 0.88-0.96) and TIR spectroscopy (AUC: 0.82; 95% CrI: 0.76-0.88). Optimal cutoff values were determined using Youden's index: 34.15 g/L for RID assay (sensitivity [Se] = 0.86, specificity [Sp] = 0.83), 22.74 g/L for TIR spectroscopy (Se = 0.88, Sp = 0.66), and 19.62% Brix for dBrix refractometry (Se = 0.90, Sp = 0.85). Correlation between RID assay and TIR spectroscopy was stronger for high-quality colostrum samples (0.80; 95% CrI: 0.77-0.84) than for low-quality samples (0.36; 95% CrI: 0.16-0.55), indicating that these methods are not perfectly correlated and justifying the need for multiple diagnostic approaches. Among individual methods, dBrix refractometry showed the highest positive predictive value (PPV = 1.00), and all methods demonstrated moderate negative predictive values (NPV = 0.46-0.57). Combining methods in series interpretation increased PPV up to 1.00 when all 3 methods were used together, though with reduced NPV. Conversely, parallel interpretation substantially improved NPV, reaching 0.98 when all 3 methods were combined. By modeling continuous measurements instead of dichotomized test results, our analysis produced refined cutoff values for assessing colostrum quality. The findings indicate that existing thresholds remain largely adequate, offering only minor performance improvements, and emphasize the need to balance diagnostic refinements with their potential effects on calf management and passive immunity. Furthermore, our findings suggest that, although individual assessment methods offer valuable diagnostic information, combining multiple methods can optimize either Se or Sp, depending on the interpretation approach, thereby further enhancing the accuracy of colostrum quality evaluation.

确保初生牛犊的高质量初乳对它们的健康和未来的生产力至关重要。我们使用贝叶斯有限混合模型来估计最佳临界值,并评估3种方法的诊断准确性-径向免疫扩散(RID)测定法,透射红外(TIR)光谱法和数字Brix (dBrix)折射法-在连续尺度上测量牛初乳质量,使用来自加拿大大西洋地区42个荷斯坦奶牛群的591个初乳样本。RID法、TIR光谱法和dBrix折射法测定的高质量初乳IgG浓度均值和标准差分别为61.07±39.8 g/L、51.28±27.38 g/L和24.32±4.13% Brix,而低质量初乳IgG浓度均值和标准差分别为19.93±15.54 g/L、7.78±37.4 g/L和15.87±3.45% Brix。高质量初乳的患病率估计为83%(95%可信区间[CrI]: 0.79-0.88)。dBrix折射仪的鉴别能力最高,曲线下面积(AUC)为0.94 (95% CrI: 0.91-0.97),其次是RID法(AUC: 0.92, 95% CrI: 0.88-0.96)和TIR光谱法(AUC: 0.82, 95% CrI: 0.76-0.88)。采用约登指数确定最佳临界值:RID法34.15 g/L(灵敏度[Se] = 0.86,特异性[Sp] = 0.83), TIR法22.74 g/L (Se = 0.88, Sp = 0.66), dBrix折射法19.62% Brix (Se = 0.90, Sp = 0.85)。RID测定和TIR光谱之间的相关性在高质量初乳样品(0.80;95% CrI: 0.77-0.84)中比在低质量样品(0.36;95% CrI: 0.16-0.55)中更强,表明这些方法并非完全相关,并证明需要多种诊断方法。其中dBrix折射法的阳性预测值最高(PPV = 1.00),所有方法均为中度阴性预测值(NPV = 0.46 ~ 0.57)。在串联解释中,当3种方法同时使用时,PPV增加到1.00,但NPV降低。相反,平行解释大大提高了NPV,当所有3种方法结合使用时,NPV达到0.98。通过模拟连续测量结果而不是二分测试结果,我们的分析产生了评估初乳质量的精细截止值。研究结果表明,现有的阈值在很大程度上仍然是足够的,只能提供微小的性能改进,并强调需要平衡诊断改进及其对小牛管理和被动免疫的潜在影响。此外,我们的研究结果表明,尽管单个评估方法提供了有价值的诊断信息,但根据不同的解释方法,多种方法结合可以优化Se或Sp,从而进一步提高初乳质量评价的准确性。
{"title":"Optimal cutoff estimation and evaluation of direct and indirect diagnostic methods for assessing bovine colostrum quality with Bayesian finite mixture models.","authors":"Eleftherios Meletis, Juan Carlos Arango-Sabogal, J Trenton McClure, Gregory P Keefe, Polychronis Kostoulas, Ibrahim Elsohaby","doi":"10.3168/jds.2025-27097","DOIUrl":"https://doi.org/10.3168/jds.2025-27097","url":null,"abstract":"<p><p>Ensuring high-quality colostrum for newborn calves is essential for their health and future productivity. We applied Bayesian finite mixture models to estimate optimal cutoff values and evaluate the diagnostic accuracy of 3 methods-radial immunodiffusion (RID) assay, transmission infrared (TIR) spectroscopy, and digital Brix (dBrix) refractometry-measured on a continuous scale for assessing bovine colostrum quality, using 591 colostrum samples from 42 Holstein dairy herds in Atlantic Canada. The mean and standard deviation of IgG concentrations for high-quality colostrum were 61.07 ± 39.8 g/L, 51.28 ± 27.38 g/L, and 24.32 ± 4.13% Brix for RID assay, TIR spectroscopy, and dBrix refractometry, respectively, compared with 19.93 ± 15.54 g/L, 7.78 ± 37.4 g/L, and 15.87 ± 3.45% Brix for low-quality samples. The prevalence of high-quality colostrum was estimated at 83% (95% credible interval [CrI]: 0.79-0.88). The dBrix refractometer demonstrated the highest discriminatory power, with an area under the curve (AUC) of 0.94 (95% CrI: 0.91-0.97), followed by RID assay (AUC: 0.92; 95% CrI: 0.88-0.96) and TIR spectroscopy (AUC: 0.82; 95% CrI: 0.76-0.88). Optimal cutoff values were determined using Youden's index: 34.15 g/L for RID assay (sensitivity [Se] = 0.86, specificity [Sp] = 0.83), 22.74 g/L for TIR spectroscopy (Se = 0.88, Sp = 0.66), and 19.62% Brix for dBrix refractometry (Se = 0.90, Sp = 0.85). Correlation between RID assay and TIR spectroscopy was stronger for high-quality colostrum samples (0.80; 95% CrI: 0.77-0.84) than for low-quality samples (0.36; 95% CrI: 0.16-0.55), indicating that these methods are not perfectly correlated and justifying the need for multiple diagnostic approaches. Among individual methods, dBrix refractometry showed the highest positive predictive value (PPV = 1.00), and all methods demonstrated moderate negative predictive values (NPV = 0.46-0.57). Combining methods in series interpretation increased PPV up to 1.00 when all 3 methods were used together, though with reduced NPV. Conversely, parallel interpretation substantially improved NPV, reaching 0.98 when all 3 methods were combined. By modeling continuous measurements instead of dichotomized test results, our analysis produced refined cutoff values for assessing colostrum quality. The findings indicate that existing thresholds remain largely adequate, offering only minor performance improvements, and emphasize the need to balance diagnostic refinements with their potential effects on calf management and passive immunity. Furthermore, our findings suggest that, although individual assessment methods offer valuable diagnostic information, combining multiple methods can optimize either Se or Sp, depending on the interpretation approach, thereby further enhancing the accuracy of colostrum quality evaluation.</p>","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":" ","pages":""},"PeriodicalIF":4.4,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145581551","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Some closing words to the Journal of Dairy Science community 《乳品科学杂志》的结束语
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-18 DOI: 10.3168/jds.2025-27744
Paul J. Kononoff Editor in Chief
{"title":"Some closing words to the Journal of Dairy Science community","authors":"Paul J. Kononoff Editor in Chief","doi":"10.3168/jds.2025-27744","DOIUrl":"10.3168/jds.2025-27744","url":null,"abstract":"","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":"108 12","pages":"Pages 12867-12871"},"PeriodicalIF":4.4,"publicationDate":"2025-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145537162","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
2025 ADSA Undergraduate Scholarship Recognition Awards 2025年ADSA本科奖学金表彰奖
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-18 DOI: 10.1016/S0022-0302(25)00930-0
{"title":"2025 ADSA Undergraduate Scholarship Recognition Awards","authors":"","doi":"10.1016/S0022-0302(25)00930-0","DOIUrl":"10.1016/S0022-0302(25)00930-0","url":null,"abstract":"","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":"108 12","pages":"Page 14086"},"PeriodicalIF":4.4,"publicationDate":"2025-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145537354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Journal of Dairy Science® and JDS Communications® Editorial Board and Ad Hoc Reviewers, 2025 Journal of Dairy Science®和JDS Communications®编辑委员会和特设审稿人,2025
IF 4.4 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2025-11-18 DOI: 10.1016/S0022-0302(25)00932-4
{"title":"Journal of Dairy Science® and JDS Communications® Editorial Board and Ad Hoc Reviewers, 2025","authors":"","doi":"10.1016/S0022-0302(25)00932-4","DOIUrl":"10.1016/S0022-0302(25)00932-4","url":null,"abstract":"","PeriodicalId":354,"journal":{"name":"Journal of Dairy Science","volume":"108 12","pages":"Pages 14087-14099"},"PeriodicalIF":4.4,"publicationDate":"2025-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145537549","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Dairy Science
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1