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Modelling the factors associated with quality of life in women with osteoporosis: A cross-sectional study 骨质疏松症女性生活质量相关因素建模:横断面研究
Pub Date : 2024-10-09 DOI: 10.1016/j.gloepi.2024.100169
Rahmatollah Moradzadeh , Maryam Zamanian , Maliheh Taheri

Background

Considering the important factors contributing to different health-related quality of life (HRQoL) subscales is essential for implementing preventive measures to increase the HRQoL among women with osteoporosis. We here evaluated the variables related to the mental and physical HRQoL in a sample of Iranian osteoporotic women.

Methods

In this cross-sectional study, the participants included 111 women with osteoporosis in 2013. Physical and mental of HRQoL were measured by the ECOS-16 questionnaire. Other variables included BMD t-score (Osteoporosis was diagnosed based on bone mineral density (BMD) with BMD t-score < −2.5), age, body mass index, educational level, marital status, duration of the disease, history of bone fracture in the past year, the number of pregnancies, and weekly walking hours. Final regression coefficients were obtained based on the total effects of estimations (decompositions of effects into direct, indirect and total effects) by structural equation model (SEM) analysis.

Results

The mean scores of physical and mental domains of HRQoL were 54(21) and 54(25), respectively. The mean of BMD t-score was −3.2 (0.9). Based on the regression coefficients obtained in the SEM model, weekly walking hours(2.2), number of pregnancies (−1.2), and history of bone fracture in past year(−2.9) were the more important determinants of physical aspect of HRQoL than other included variables of this study. Furthermore, age over than 60 (−9.1), history of bone fracture in past year(−4.8), weekly walking hours(2.3), marital status(−5), and education level (3.9)influenced the mental aspect of HRQoL.

Conclusions

Social and life style factors tend to impact on physical and mental domains of HRQoL, a measure that is influenced by multiple factors among postmenopausal women. In this respect, these obtained factors should be considered for health planning to improve the physical and mental domains of HRQoL among postmenopausal women.
背景考虑导致不同健康相关生活质量(HRQoL)分量表的重要因素对于实施预防措施以提高骨质疏松症妇女的 HRQoL 至关重要。我们在此对伊朗骨质疏松症妇女样本中与精神和身体 HRQoL 相关的变量进行了评估。身体和精神方面的 HRQoL 通过 ECOS-16 问卷进行测量。其他变量包括 BMD t-score(诊断骨质疏松症的依据是 BMD t-score< -2.5)、年龄、体重指数、教育程度、婚姻状况、病程、过去一年的骨折史、怀孕次数和每周步行时间。通过结构方程模型(SEM)分析,根据估计的总效应(效应分解为直接效应、间接效应和总效应)得出最终回归系数。BMD t-得分的平均值为-3.2(0.9)。根据 SEM 模型得出的回归系数,与本研究中的其他变量相比,每周步行时间(2.2)、怀孕次数(-1.2)和过去一年的骨折史(-2.9)是决定身体方面 HRQoL 的更重要因素。此外,年龄超过 60 岁(-9.1)、过去一年有骨折史(-4.8)、每周步行时间(2.3)、婚姻状况(-5)和受教育程度(3.9)也影响了 HRQoL 的心理方面。因此,在制定健康计划时应考虑这些因素,以改善绝经后妇女的身体和精神方面的 HRQoL。
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引用次数: 0
Comparing AI/ML approaches and classical regression for predictive modeling using large population health databases: Applications to COVID-19 case prediction 比较使用大型人口健康数据库进行预测建模的人工智能/ML 方法和经典回归方法:应用于 COVID-19 病例预测
Pub Date : 2024-10-04 DOI: 10.1016/j.gloepi.2024.100168
Lise M. Bjerre , Cayden Peixoto , Rawan Alkurd , Robert Talarico , Rami Abielmona

Background

Research comparing artificial intelligence and machine learning (AI/ML) methods with classical statistical methods applied to large population health databases is limited.

Objectives

This retrospective cohort study aimed to compare the predictive performance of AI/ML algorithms against conventional multivariate logistic regression models using linked health administrative data.

Methods

Using Ontario's population health databases, we created a cohort of residents of the city of Ottawa, Ontario, who underwent a PCR test for COVID-19 between March 10, 2020, and May 13, 2021. Using demographic, socio-economic and health data (including COVID-19 PCR test results and available, symptom data), we developed predictive models for the purpose of COVID-19 case identification using the following approaches: classical multivariate logistic regression (LR); deep neural network (DNN); random forest (RF); and gradient boosting trees (GBT). Model performance comparisons were made using the area under the curve (AUC) swarm plot for 10-fold cross-validation.

Results

The cohort consisted of n = 351,248 Ottawa residents tested for COVID-19 during the study period. Among whom, a total of n = 883,879 unique COVID-19 tests were performed (2.6 % positive test results). Inclusion of COVID-19 symptoms data in the analysis improved model performance and variable predictive value across all tested models (p < 0.0001), with the 10-fold cross-validation AUC increasing to near or over 0.7 in all models when symptoms data were included. In various pairwise comparisons, the GBT method had the highest predictive ability (AUC = 0.796 ± 0.017), significantly outperforming multivariate logistic regression and the other AI/ML approaches.

Conclusions

Conventional multivariate regression-based models are better than some and worse than other machine learning algorithms to provide good predictive accuracy in a moderate dataset with a reasonable number of features. However, whenever possible, the AI/ML GBT approach should be considered.
背景将人工智能和机器学习(AI/ML)方法与应用于大型人口健康数据库的传统统计方法进行比较的研究十分有限。方法我们利用安大略省的人口健康数据库,建立了一个安大略省渥太华市居民队列,这些居民在 2020 年 3 月 10 日至 2021 年 5 月 13 日期间接受了 COVID-19 PCR 检测。利用人口、社会经济和健康数据(包括 COVID-19 PCR 检测结果和可用的症状数据),我们开发了用于 COVID-19 病例识别的预测模型,采用的方法包括:经典多元逻辑回归 (LR)、深度神经网络 (DNN)、随机森林 (RF) 和梯度提升树 (GBT)。使用曲线下面积(AUC)群图对模型的性能进行比较,并进行 10 倍交叉验证。结果在研究期间,接受 COVID-19 检测的渥太华居民共有 n = 351,248 人。其中,共进行了 n = 883,879 次独特的 COVID-19 检测(2.6% 的检测结果为阳性)。在所有测试模型中,将 COVID-19 症状数据纳入分析可提高模型性能和可变预测值(p < 0.0001),纳入症状数据后,所有模型的 10 倍交叉验证 AUC 均接近或超过 0.7。在各种配对比较中,GBT 方法的预测能力最高(AUC = 0.796 ± 0.017),明显优于多元逻辑回归和其他人工智能/ML 方法。结论传统的基于多元回归的模型优于某些模型,而不如其他机器学习算法,能在具有合理特征数量的中等数据集中提供良好的预测准确性。不过,在可能的情况下,应考虑采用人工智能/ML GBT 方法。
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引用次数: 0
Estimating effects of aging and disease progression in current and former smokers using longitudinal models 利用纵向模型估算当前吸烟者和曾经吸烟者衰老和疾病进展的影响
Pub Date : 2024-09-29 DOI: 10.1016/j.gloepi.2024.100165
Matthew Strand , Surya Bhatt , Matthew Moll , David Baraghoshi

Objectives

To separate estimates of mean change in a health outcome into components of aging and disease progression for different severity groups of chronic obstructive pulmonary disease (COPD).

Study design and methods

A longitudinal model can be used to estimate mean change in a health outcome over time. Methods to separate this change into portions due to aging and disease progression are discussed, including conditions that allow for accurate estimation. Linear mixed models were used to estimate these changes for forced expiratory volume in 1 s (FEV1) for various COPD severity and smoking groups using a large cohort (COPDGene) followed for over 10 years.

Results

Based on an analysis of 4967 subjects, age-related loss in FEV1 was found to be about 1 % per year, consistent with published work. Excess average losses (those beyond natural aging) were significant for all severity groups (except nonsmokers), including those with smoking history but normal lung function. Subjects in higher severity groups tended to have less loss in FEV1, but more relative loss, compared to baseline averages. Losses in FEV1 that included both aging and disease progression ranged from 1 to 3 % over severity groups, with current smokers generally exhibiting greater mean losses in FEV1 than former smokers.

Discussion

Effects of disease progression separate from aging can be estimated in observational studies, although care should be taken in order to make sure assumptions involving this separation are reasonable for a given study. This article demonstrates methods to estimate such effects using temporal changes in lung function for subjects in the COPDGene study.
目的将慢性阻塞性肺病(COPD)不同严重程度组的健康结果平均变化估算值分为老化和疾病进展两部分。本文讨论了将这一变化分为老化和疾病进展两部分的方法,包括进行精确估算的条件。结果基于对 4967 名受试者的分析,发现与年龄相关的 FEV1 损失约为每年 1%,与已发表的研究结果一致。在所有严重程度组别(不吸烟者除外),包括有吸烟史但肺功能正常的受试者中,超额平均损失(自然衰老之外的损失)都很显著。与基线平均值相比,严重程度较高组别受试者的 FEV1 损失较少,但相对损失较多。包括衰老和疾病进展在内的 FEV1 损失在各严重程度组中从 1% 到 3% 不等,目前吸烟者的 FEV1 平均损失通常大于曾经吸烟者。讨论在观察性研究中可以估算出疾病进展与衰老分离的影响,但应注意确保涉及这种分离的假设对于特定研究是合理的。本文展示了利用 COPDGene 研究中受试者肺功能的时间变化来估计这种影响的方法。
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引用次数: 0
Improving the integration of epidemiological data into human health risk assessment: What risk assessors told us they want 更好地将流行病学数据纳入人类健康风险评估:风险评估员告诉我们他们想要什么
Pub Date : 2024-09-28 DOI: 10.1016/j.gloepi.2024.100167
Carl V. Phillips , Igor Burstyn , David J. Miller , Ali K. Hamade , Raghavendhran Avanasi , Denali Boon , Saumitra V. Rege , Sandrine E. Déglin
One of the practical contributions of epidemiology studies is to inform risk assessment and management to protect public health. However, there is a perception among some that environmental and occupational epidemiology is falling short of satisfying the needs of risk assessors. The specific reasons for this are not clearly understood. To help identify the points of dissatisfaction and possible areas for mutual learning, we conducted a survey of risk assessors, seeking their opinions of epidemiology research. We present a few quantitative measures and a thematic analysis of responses to open-ended questions. Survey results suggest that some risk assessors (with some adamant exceptions) believe that epidemiology has great potential to contribute to risk assessment but can be deficient in many ways. For example, respondents identified the lack of full disclosure of methods, deficiencies in exposure assessment, the absence of comprehensive uncertainty analyses, and the failure to investigate or explore thresholds of effects as some of the common shortcomings. These could be straightforward to address. Respondents also brought up a wide collection of more complicated and subtle concerns that could lead to further improvement of useful results. We identify areas where mutually-educating interdisciplinary dialogue seems particularly promising. Epidemiology research is expensive, and risk management decisions even more so; therefore, it is desirable for the risk assessment and epidemiologic communities to work toward making epidemiologic research more useful for informing decisions.
流行病学研究的实际贡献之一是为风险评估和管理提供信息,以保护公众健康。然而,一些人认为环境和职业流行病学不能满足风险评估者的需求。造成这种情况的具体原因尚不清楚。为了帮助找出不满意的地方以及相互学习的可能领域,我们对风险评估人员进行了一次调查,征求他们对流行病学研究的意见。我们提供了一些定量指标,并对开放式问题的回答进行了专题分析。调查结果表明,一些风险评估员(也有一些坚决的例外)认为流行病学对风险评估有很大的贡献潜力,但在很多方面可能存在不足。例如,受访者认为,缺乏对方法的充分披露、暴露评估中的缺陷、缺乏全面的不确定性分析,以及未能调查或探索影响的阈值,是一些常见的不足之处。这些都是可以直接解决的问题。受访者还提出了许多更复杂、更微妙的问题,这些问题可以进一步改进有用的结果。我们确定了一些领域,在这些领域中,相互教育的跨学科对话似乎特别有前景。流行病学研究耗资巨大,风险管理决策更是如此;因此,风险评估界和流行病学界应努力使流行病学研究更有助于为决策提供信息。
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引用次数: 0
The mockery that confounds better treatment of confounding in epidemiology: The change in estimate fallacy 在流行病学中更好地处理混杂因素的嘲弄:估计值变化谬误
Pub Date : 2024-09-26 DOI: 10.1016/j.gloepi.2024.100166
Igor Burstyn
Confounding is one of the most infamous bugbears of epidemiology, used by some to dismiss the field's utility outright. The subject has received considerable attention from epidemiologists and the field boasts a remarkable arsenal for addressing the issue. However, it appears that there are still misconceptions about how to identify variables that cause confounding (a lack of exchangeability) in epidemiologic practice. In this commentary, I examine whether analysis of the properties of change-in-estimate method for identification of confounding, exemplified by two highly cited papers, has been appropriately cited in published reports and whether it was utilized to improve epidemiologic practice. I conclude that the myth that a change-in-estimate criterion of 10 % is legitimate for identifying confounding persists in epidemiological practice, despite having been discredited by several independent research groups decades ago. Speculations on possible solutions to this problem are offered, but my work's main contribution is identification of a problem of how methodological advances in epidemiology may be misapplied. There currently do not exist any universal criteria for identification of confounding! “Citation without representation” or biased presentation of conclusions of methodological research may be pervasive.
混杂是流行病学最臭名昭著的问题之一,有些人利用它来彻底否定该领域的实用性。流行病学家对这一问题给予了极大关注,该领域也拥有解决这一问题的强大武器。然而,在流行病学实践中,对于如何识别导致混杂(缺乏可交换性)的变量,似乎仍存在误解。在这篇评论中,我将以两篇引用率很高的论文为例,探讨在发表的报告中是否适当引用了用于识别混杂因素的估计值变化法的特性分析,以及是否利用该方法改进了流行病学实践。我的结论是,尽管数十年前就有几个独立的研究小组否定了 10% 的估计值变化标准,但流行病学实践中仍然存在着这样一个神话,即估计值变化 10% 是识别混杂因素的合法标准。我对这一问题的可能解决方案进行了推测,但我的工作的主要贡献在于发现了流行病学方法论的进步可能被误用的问题。目前还不存在任何通用的混杂识别标准!"没有代表性的引用 "或对方法学研究结论的偏颇表述可能普遍存在。
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引用次数: 0
Tailored guidance to apply the Estimand framework to Trials within Cohorts (TwiCs) studies 将 Estimand 框架应用于群组内试验 (TwiCs) 研究的定制指南
Pub Date : 2024-09-21 DOI: 10.1016/j.gloepi.2024.100163
R. Gal , R. Kessels , K. Luijken , L.A. Daamen , D.R. Mink van der Molen , S.A.M. Gernaat , A.M. May , H.M. Verkooijen , P.M. van de Ven
Objective: The estimand framework offers a structured approach to define the treatment effect to be estimated in a clinical study. Defining the estimand upfront helps formulating the research question and informs study design, data collection and statistical analysis methods. Since the Trials within Cohorts (TwiCs) design has unique characteristics, the objective of this study is to describe considerations and provide guidance for formulating estimands for TwiCs studies.
Methods: The key attributes of an estimand are the target population, treatments that are compared, the endpoint, intercurrent events and their handling, and the population-level summary measure. The estimand framework was applied retrospectively to two TwiCs studies: the SPONGE and UMBRELLA Fit trial. The aim is to demonstrate how the estimand framework can be implemented in TwiCs studies, thereby focusing on considerations relevant for defining the estimand. Three estimands were defined for both studies. For the SPONGE trial, estimators were derived.
Results: Intercurrent events considered to occur exclusively or more frequently in TwiCs studies compared to conventional randomized trials included intervention refusal after randomization, misalignment of timing of routine cohort measurements and the intervention period, and participants in the control arm initiating treatments similar to the studied intervention. Considerations for handling refusal after randomization related to decisions on whether the target population should include all eligible participants or the subpopulation that would accept (or undergo) the intervention when offered. Considerations for handling treatment initiation in the control arm and misalignments of timing related to decisions on whether such events should be considered part of treatment policy or whether interest is in a hypothetical scenario where such events do not occur.
Conclusion: The TwiCs study design has unique features that pose specific considerations when formulating an estimand. The examples in this study can provide guidance in the definition of estimands in future TwiCs studies.
目的:估算指标框架提供了一种结构化方法,用于定义临床研究中需要估算的治疗效果。预先定义估计指标有助于提出研究问题,并为研究设计、数据收集和统计分析方法提供依据。由于群组内试验(TwiCs)设计有其独特性,本研究的目的是描述TwiCs研究中的注意事项,并为制定估计指标提供指导:估算指标的关键属性包括目标人群、比较的治疗方法、终点、并发症及其处理以及人群水平的总结测量。对两项TwiCs研究--SPONGE和UMBRELLA Fit试验--回顾性地应用了估计值框架。目的是展示如何在TwiCs研究中实施估计指标框架,从而重点关注与定义估计指标相关的注意事项。两项研究都定义了三个估计指标。结果:与传统随机试验相比,TwiCs 研究中被认为是唯一或更频繁发生的并发症包括:随机化后拒绝干预、常规队列测量时间与干预期不一致、对照组参与者开始接受与所研究干预类似的治疗。处理随机化后拒绝干预的考虑因素与目标人群是否应包括所有符合条件的参与者或提供干预后会接受(或进行)干预的亚人群有关。考虑如何处理对照组的治疗启动和时间错位问题,这涉及到是否应将此类事件视为治疗政策的一部分,或者是否应关注不发生此类事件的假设情况:TwiCs 研究设计有其独特之处,在制定估计值时需要特别考虑。本研究中的例子可为今后的TwiCs研究中估算指标的定义提供指导。
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引用次数: 0
A note on handling conditional missing values 关于处理条件缺失值的说明
Pub Date : 2024-09-21 DOI: 10.1016/j.gloepi.2024.100164
Mohammad Ali Mansournia , Maryam Nazemipour , Mahyar Etminan
In medical research, some variables are conditionally defined on some levels of another variable, leading to conditional missing data. Imputation of this type of structural missing data is needed given inefficiency of listwise deletion inherent in regression modeling. Using some examples, we illustrate handling of conditional missing values using simple imputation procedures in etiologic and prediction research.
在医学研究中,有些变量是根据另一个变量的某些水平有条件地定义的,这就导致了有条件的缺失数据。鉴于回归模型中固有的列表式删除效率低下,需要对这类结构性缺失数据进行估算。我们将通过一些实例,说明在病因学和预测学研究中使用简单估算程序处理条件缺失值的方法。
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引用次数: 0
Improving the timeliness of birth registration in Fiji through a financial incentive 通过财政激励措施提高斐济出生登记的及时性
Pub Date : 2024-09-10 DOI: 10.1016/j.gloepi.2024.100162
Christine Linhart , Neel Singh , Meli Nadakuca , Varanisese Saumaka , Carlie Congdon , Sharita Serrao , Richard Taylor , Stephen Morrell

Background

Fiji is a Pacific Island nation with the predominant ethnic groups indigenous Fijians (iTaukei) (62 %) and Fijians of Indian descent (31 %). This study reports on the effect of a Parental Assistance Payment Program (PAPP) tied to on-time birth registration, available in Fiji from August 2018 to July 2020.

Methods

Unit record birth registration data (n = 117,829) for children born during 2016–22 were used to calculate mean birth-to-registration intervals and the likelihood of on-time birth registration (within 365 days) before the PAPP (January 2016–July 2018) compared to during the PAPP (August 2018–July 2020), by population disaggregations (sex, ethnicity, age, marital status).

Results

During the PAPP, mean birth-to-registration intervals declined sharply by 81 %, from 665 days (95 %CI: 658–671) to 124 days (121–127). The largest declines were among i-Taukei children (803 to 139 days, 83 %) compared to non-iTaukei (283 to 76 days, 73 %); mothers aged 10–19 years (880 to 134 days, 85 %) compared to ≥20 years (653 to 123 days, 81 %); and single mothers (983 to 145 days, 85 %) compared to married mothers (570 to 115 days, 80 %). On-time birth registration increased from 57 % to 93 %, and the adjusted hazard ratio showed children born during the PAPP were 2.3 times more likely (95 %CI: 2.2–2.4) to have their birth registered on-time compared to children born before the PAPP. When the PAPP was discontinued in August 2020, the birth-to-registration interval increased sharply in all population groups.

Conclusions

During the two-year period the PAPP was available, it was highly effective at improving the timeliness of birth registration, particularly among iTaukei children, young mothers, and single mothers. After the PAPP was discontinued, the timeliness of birth registration deteriorated sharply. Longer post-PAPP follow-up time (≠5 years) is required to determine whether the timeliness of birth registration has deteriorated to levels similar to those during the pre-PAPP period.

背景斐济是一个太平洋岛国,主要民族为土著斐济人(iTaukei)(62%)和印度裔斐济人(31%)。本研究报告了与按时出生登记挂钩的父母援助付款计划(PAPP)的效果,该计划于 2018 年 8 月至 2020 年 7 月在斐济实施。方法使用 2016-22 年期间出生儿童的单位记录出生登记数据(n = 117829),按人口分类(性别、种族、年龄、婚姻状况)计算平均出生到登记间隔时间,以及在 PAPP 实施前(2016 年 1 月至 2018 年 7 月)与 PAPP 实施期间(2018 年 8 月至 2020 年 7 月)按时进行出生登记(365 天内)的可能性。结果在 PAPP 期间,出生到登记的平均间隔时间急剧下降了 81%,从 665 天(95%CI:658-671)降至 124 天(121-127)。下降幅度最大的是:与非陶凯族儿童(283 至 76 天,73%)相比,陶凯族儿童(803 至 139 天,83%);与年龄≥20 岁的母亲(653 至 123 天,81%)相比,10-19 岁的母亲(880 至 134 天,85%);与已婚母亲(570 至 115 天,80%)相比,单身母亲(983 至 145 天,85%)。按时进行出生登记的比例从 57% 上升到 93%,调整后的危险比显示,与实施该计划前出生的儿童相比,在该计划期间出生的儿童按时进行出生登记的可能性要高 2.3 倍(95%CI:2.2-2.4)。在该计划实施的两年期间,它在提高出生登记的及时性方面非常有效,特别是在 iTaukei 儿童、年轻母亲和单身母亲中。该计划终止后,出生登记的及时性急剧下降。为确定出生登记的及时性是否已下降到与该方案实施前类似的水平,需要在该方案实施后进行更长时间的跟踪(≠5 年)。
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引用次数: 0
Predicting adolescent psychopathology from early life factors: A machine learning tutorial 从早期生活因素预测青少年心理病理学:机器学习教程
Pub Date : 2024-08-29 DOI: 10.1016/j.gloepi.2024.100161
Faizaan Siddique , Brian K. Lee

Objective

The successful implementation and interpretation of machine learning (ML) models in epidemiological studies can be challenging without an extensive programming background. We provide a didactic example of machine learning for risk prediction in this study by determining whether early life factors could be useful for predicting adolescent psychopathology.

Methods

In total, 9643 adolescents ages 9–10 from the Adolescent Brain and Cognitive Development (ABCD) Study were included in ML analysis to predict high Child Behavior Checklist (CBCL) scores (i.e., t-scores ≥ 60). ML models were constructed using a series of predictor combinations (prenatal, family history, sociodemographic) across 5 different algorithms. We assessed ML performance through sensitivity, specificity, F1-score, and area under the curve (AUC) metrics.

Results

A total of 1267 adolescents (13.1 %) were found to have high CBCL scores. The best performing algorithms were elastic net and gradient boosted trees. The best performing elastic net models included prenatal and family history factors (Sensitivity 0.654, Specificity 0.713; AUC 0.742, F1-score 0.401) and prenatal, family, history, and sociodemographic factors (Sensitivity 0.668, Specificity 0.704; AUC 0.745, F1-score 0.402). Across all 5 ML algorithms, family history factors (e.g., either parent had nervous breakdowns, trouble holding jobs/fights/police encounters, and counseling for mental issues) and sociodemographic covariates (e.g., maternal age, child's sex, caregiver income and caregiver education) tended to be better predictors of adolescent psychopathology. The most important prenatal predictors were unplanned pregnancy, birth complications, and pregnancy complications.

Conclusion

Our results suggest that inclusion of prenatal, family history, and sociodemographic factors in ML models can generate moderately accurate predictions of adolescent psychopathology. Issues associated with model overfitting, hyperparameter tuning, and system seed setting should be considered throughout model training, testing, and validation. Future early risk predictions models may improve with the inclusion of additional relevant covariates.

目标如果没有丰富的编程背景,在流行病学研究中成功实施和解释机器学习(ML)模型可能具有挑战性。我们在本研究中提供了一个机器学习用于风险预测的教学实例,确定早期生活因素是否有助于预测青少年心理病理学。方法我们将青少年大脑和认知发展(ABCD)研究中9643名9-10岁的青少年纳入ML分析,以预测儿童行为检查表(CBCL)的高分(即t分数≥60)。我们使用 5 种不同算法的一系列预测因子组合(产前、家族史、社会人口学)构建了 ML 模型。我们通过灵敏度、特异性、F1-分数和曲线下面积(AUC)指标评估了ML的性能。表现最好的算法是弹性网和梯度提升树。表现最好的弹性网模型包括产前和家族史因素(灵敏度为0.654,特异度为0.713;AUC为0.742,F1-score为0.401)以及产前、家族、病史和社会人口因素(灵敏度为0.668,特异度为0.704;AUC为0.745,F1-score为0.402)。在所有 5 种 ML 算法中,家族史因素(如父母任何一方精神崩溃、难以找到工作/打架/遭遇警察以及因精神问题接受咨询)和社会人口协变量(如母亲年龄、孩子性别、照顾者收入和照顾者教育程度)往往更能预测青少年的心理病态。结论我们的研究结果表明,将产前、家族史和社会人口学因素纳入 ML 模型,可以对青少年心理病理学做出适度准确的预测。在整个模型训练、测试和验证过程中,应考虑与模型过拟合、超参数调整和系统种子设置相关的问题。如果加入更多的相关协变量,未来的早期风险预测模型可能会有所改进。
{"title":"Predicting adolescent psychopathology from early life factors: A machine learning tutorial","authors":"Faizaan Siddique ,&nbsp;Brian K. Lee","doi":"10.1016/j.gloepi.2024.100161","DOIUrl":"10.1016/j.gloepi.2024.100161","url":null,"abstract":"<div><h3>Objective</h3><p>The successful implementation and interpretation of machine learning (ML) models in epidemiological studies can be challenging without an extensive programming background. We provide a didactic example of machine learning for risk prediction in this study by determining whether early life factors could be useful for predicting adolescent psychopathology.</p></div><div><h3>Methods</h3><p>In total, 9643 adolescents ages 9–10 from the Adolescent Brain and Cognitive Development (ABCD) Study were included in ML analysis to predict high Child Behavior Checklist (CBCL) scores (i.e., t-scores ≥ 60). ML models were constructed using a series of predictor combinations (prenatal, family history, sociodemographic) across 5 different algorithms. We assessed ML performance through sensitivity, specificity, F1-score, and area under the curve (AUC) metrics.</p></div><div><h3>Results</h3><p>A total of 1267 adolescents (13.1 %) were found to have high CBCL scores. <strong>The best performing algorithms were elastic net and gradient boosted trees. The best performing elastic net models included prenatal and family history factors (Sensitivity 0.654, Specificity 0.713; AUC 0.742, F1-score 0.401) and prenatal, family, history, and sociodemographic factors (Sensitivity 0.668, Specificity 0.704; AUC 0.745, F1-score 0.402).</strong> Across all 5 ML algorithms, family history factors (e.g., either parent had nervous breakdowns, trouble holding jobs/fights/police encounters, and counseling for mental issues) and sociodemographic covariates (e.g., maternal age, child's sex, caregiver income and caregiver education) tended to be better predictors of adolescent psychopathology. The most important prenatal predictors were unplanned pregnancy, birth complications, and pregnancy complications.</p></div><div><h3>Conclusion</h3><p>Our results suggest that inclusion of prenatal, family history, and sociodemographic factors in ML models can generate moderately accurate predictions of adolescent psychopathology. Issues associated with model overfitting, hyperparameter tuning, and system seed setting should be considered throughout model training, testing, and validation. Future early risk predictions models may improve with the inclusion of additional relevant covariates.</p></div>","PeriodicalId":36311,"journal":{"name":"Global Epidemiology","volume":"8 ","pages":"Article 100161"},"PeriodicalIF":0.0,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590113324000270/pdfft?md5=dee32756e9126cdf20786c2d3fd846a7&pid=1-s2.0-S2590113324000270-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142122258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Challenging unverified assumptions in causal claims: Do gas stoves increase risk of pediatric asthma? 质疑因果关系声明中未经核实的假设:燃气灶会增加小儿哮喘的风险吗?
Pub Date : 2024-08-21 DOI: 10.1016/j.gloepi.2024.100160
Louis Anthony Cox, Jr.

The use of unverified models for risk estimates and policy recommendations can be highly misleading, as their predictions may not reflect real-world health impacts. For example, a recent article states that NO2 from gas stoves “likely causes ∼50,000 cases of current pediatric asthma from long-term NO2 exposure alone” annually in the United States. This explicitly causal claim, which is contrary to several methodology and review articles published in this journal, among others, reflects both (a) An unverified modeling assumption that pediatric asthma burden is approximately proportional to NO2; and (b) An unverified causal assumption that the assumed proportionality between exposure and response is causal. The article is devoid of any causal analysis showing that these assumptions are likely to be true. It does not show that reducing NO2 exposure from gas stoves would reduce pediatric asthma risk. Its key references report no significant associations – let alone causation – between NO2 and pediatric asthma. Thus, the underlying data suggests that the number of pediatric asthma cases caused by gas stoves in the United States is indistinguishable from zero. This highlights the need to rigorously validate modeling assumptions and causal claims in public health risk assessments to ensure scientifically sound foundations for policy decisions.

使用未经验证的模型进行风险估算和政策建议可能会产生很大的误导,因为其预测可能无法反映真实世界的健康影响。例如,最近有一篇文章指出,在美国,每年仅来自燃气灶的二氧化氮 "就可能因长期接触二氧化氮而导致 5 万例当前的小儿哮喘"。这一明确的因果关系说法与本刊发表的几篇方法论和评论文章等相悖,反映了(a)未经核实的模型假设,即儿科哮喘负担与二氧化氮大致成正比;以及(b)未经核实的因果关系假设,即假设的暴露与反应之间的比例关系是因果关系。这篇文章没有进行任何因果分析,表明这些假设可能是真实的。文章没有说明减少燃气灶的二氧化氮暴露量会降低小儿哮喘风险。文章的主要参考文献没有报告二氧化氮与小儿哮喘之间存在明显的关联,更不用说因果关系了。因此,基本数据表明,在美国,由燃气灶引发的小儿哮喘病例数量与零无异。这凸显了在公共健康风险评估中严格验证建模假设和因果关系声明的必要性,以确保为决策提供科学合理的基础。
{"title":"Challenging unverified assumptions in causal claims: Do gas stoves increase risk of pediatric asthma?","authors":"Louis Anthony Cox, Jr.","doi":"10.1016/j.gloepi.2024.100160","DOIUrl":"10.1016/j.gloepi.2024.100160","url":null,"abstract":"<div><p>The use of unverified models for risk estimates and policy recommendations can be highly misleading, as their predictions may not reflect real-world health impacts. For example, a recent article states that NO<sub>2</sub> from gas stoves “likely causes ∼50,000 cases of current pediatric asthma from long-term NO<sub>2</sub> exposure alone” annually in the United States. This explicitly causal claim, which is contrary to several methodology and review articles published in this journal, among others, reflects both (a) An unverified modeling assumption that pediatric asthma burden is approximately proportional to NO<sub>2</sub>; and (b) An unverified causal assumption that the assumed proportionality between exposure and response is causal. The article is devoid of any causal analysis showing that these assumptions are likely to be true. It does not show that reducing NO<sub>2</sub> exposure from gas stoves would reduce pediatric asthma risk. Its key references report no significant associations – let alone causation – between NO<sub>2</sub> and pediatric asthma. Thus, the underlying data suggests that the number of pediatric asthma cases caused by gas stoves in the United States is indistinguishable from zero. This highlights the need to rigorously validate modeling assumptions and causal claims in public health risk assessments to ensure scientifically sound foundations for policy decisions.</p></div>","PeriodicalId":36311,"journal":{"name":"Global Epidemiology","volume":"8 ","pages":"Article 100160"},"PeriodicalIF":0.0,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590113324000269/pdfft?md5=6eb2ea0e253f4813c3fa87272c37c4f8&pid=1-s2.0-S2590113324000269-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142099240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Global Epidemiology
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