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Modelling the impact of vaccination on cholera transmission dynamics under stratified populations and seasonality 在分层人群和季节性条件下,模拟疫苗接种对霍乱传播动态的影响
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-23 DOI: 10.1016/j.idm.2025.06.006
Leul Mekonnen Anteneh, Sètondji Diane Zanvo, Kassifou Traore, Romain Glèlè Kakaï
Different types of oral cholera vaccines (OCVs) are currently available in the global market to combat cholera epidemic. In most of developing countries, there is comparatively limited deployment of vaccination programs. In this study, we develop a non-linear deterministic mathematical model to investigate the dynamics of cholera in the presence of vaccination under stratified population, and taking into account the seasonality of the disease dynamic. The model stratifies the total population into two strata based on level of exposure or individuals risk status. We use reported cholera data to estimate the values of model parameters using the least square method together with the fminsearch function in the MATLAB optimization toolbox. Sensitivity analysis was performed to identify the impact of vaccination on cholera transmission dynamics. Numerical results show that the reproduction numbers were 3.35 and 2.6 in more and less exposed population, respectively, with an average value of the whole population equal to 2.98. Specifically, our findings indicate that at least 70 % of the most exposed population needs to be vaccinated to halt transmission within that group, while a minimum of 62 % of the less exposed population must be vaccinated to halt transmission in this population. We further observe that the vaccination rate significantly impact the amplitude of the epidemic curves. Our findings suggest that vaccination of susceptible population stratified with a certain priority (e.g., level of exposure or individual's risk status) against the disease can reduce the transmission of cholera, potentially slowing the spread of the bacteria in a population.
目前,全球市场上有不同类型的口服霍乱疫苗,可用于防治霍乱流行。在大多数发展中国家,疫苗接种计划的部署相对有限。在这项研究中,我们开发了一个非线性确定性数学模型来研究霍乱在分层人群中接种疫苗的动态,并考虑到疾病动态的季节性。该模型根据暴露水平或个人风险状况将总人口分为两层。我们使用报告的霍乱数据,结合MATLAB优化工具箱中的fminsearch函数,使用最小二乘法估计模型参数的值。进行敏感性分析以确定疫苗接种对霍乱传播动态的影响。数值结果表明,暴露程度高和暴露程度低的种群的繁殖数分别为3.35和2.6,整个种群的平均值为2.98。具体而言,我们的研究结果表明,至少70%的暴露最多的人群需要接种疫苗,以阻止该人群中的传播,而至少62%的暴露较少的人群必须接种疫苗,以阻止该人群中的传播。我们进一步观察到,疫苗接种率显著影响流行曲线的振幅。我们的研究结果表明,按一定优先级(例如,暴露水平或个人风险状况)分层的易感人群接种疫苗可以减少霍乱的传播,从而可能减缓细菌在人群中的传播。
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引用次数: 0
Analysis of vaccination strategies in a heterosexual HPV transmission model with a case study in Xinjiang of China 中国新疆地区异性HPV传播模型的疫苗接种策略分析
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-23 DOI: 10.1016/j.idm.2025.06.004
Ramziya Rifhat , Shayidan Abuduwaili , Zhidong Teng , Kai Wang
Vaccination has confirmed efficacy in preventing human papillomavirus (HPV) infection. The inclusion of males in vaccination programs remains a subject of debate, and the optimal allocation of vaccines across genders for maximizing benefits remains unclear. This work proposes a heterosexual HPV transmission model with vaccination and employs the data from Xinjiang of China, as a case study to assess HPV vaccination strategies. The dynamics of the model, including the nonnegativity and boundedness of solutions, the calculation of the basic reproduction number (BRN), the stability of disease-free equilibrium, and the uniform persistence of disease, are investigated. Theoretical findings highlight the decisive role of the BRN in determining model dynamics. Furthermore, the optimal vaccine distribution strategy between males and females was established when the vaccine amount is limited. Meanwhile, this work involves fitting and estimating parameters and the current BRN based on actual data regarding with HPV infection and secondary cervical cancer (CC) cases in Xinjiang from January 2009 to December 2019. The numerical simulations are employed to explore the sensitivity of model parameters, especially the vaccination rates, to the BRN and HPV infection and CC with time changes, discuss the impact of vaccine distribution between males and females on the dynamic changes in new cases of HPV infection and CC, and further analyzed the control effect of bivalent and nine-valent HPV vaccines in Xinjiang of China. Additionally, several practical strategies are introduced to manage the continued spread of HPV infection and CC in the region.
疫苗接种已证实对预防人乳头瘤病毒(HPV)感染有效。将男性纳入疫苗接种计划仍然是一个有争议的话题,为了最大限度地提高效益,跨性别疫苗的最佳分配仍然不清楚。本研究提出了一个接种HPV疫苗的异性恋HPV传播模型,并采用来自中国新疆的数据作为案例研究来评估HPV疫苗接种策略。研究了模型的动力学性质,包括解的非负性和有界性、基本繁殖数(BRN)的计算、无病平衡的稳定性和疾病的均匀持续性。理论发现强调了BRN在决定模型动力学方面的决定性作用。建立了在疫苗数量有限的情况下,男女之间的最佳疫苗分配策略。同时,根据2009年1月至2019年12月新疆地区HPV感染和继发性宫颈癌(CC)病例的实际数据,拟合参数并估计当前BRN。通过数值模拟,探讨模型参数特别是疫苗接种率对BRN、HPV感染和CC随时间变化的敏感性,探讨男女疫苗分布对新发HPV感染和CC动态变化的影响,并进一步分析新疆地区二价和九价HPV疫苗的控制效果。此外,还介绍了一些实用战略,以控制HPV感染和CC在该区域的持续传播。
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引用次数: 0
Control of Rhipicephalus sanguineus ticks and Rocky Mountain spotted fever informed by an in silico tool 用计算机工具报告血蜱和落基山斑疹热的控制情况
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-18 DOI: 10.1016/j.idm.2025.06.005
Francesca Rubino , Patrick Foley , Janet Foley
We explored a compartment “susceptible-infected-recovered” model to prioritize and test the effectiveness of dog- and tick-based interventions against Rocky Mountain spotted fever and its tick vector Rhipicephalus sanguineus s.l. In the face of increasingly urban epidemics of RMSF with high case fatality, particularly targeting marginalized communities, wrap-around campaigns (comprising all or some of canine culling, fertility control, and restraint to property; on-dog and environmental acaricide; and education and awareness programs for public health workers and at-risk residents) are unsustainably resource-intensive and may lack efficacy in managing the very hard to control tick. Our model allows us to strategize interventions and develop an optimized campaign against RMSF, using parameters associated with the epidemic in Ensenada, Baja California as an example. Combining usage of acaricides on dogs and the environment optimized success as measured by up to 10 years of no new canine cases, a proxy for human cases, as well as reduced tick burden. Success was greater when the campaign was begun in winter or spring and achieved at least 60 % coverage. This combination was considerably more successful than either dog or environmental acaricide alone, culling of dogs which was only successful with 100 % of dogs removed, and spay/neuter campaigns which did not reduce tick burdens. However, spay/neuter of outside dogs as an adjunct to the acaricide campaign helped stabilize the canine population and encouraged herd immunity. Although parameterized for Ensenada, the model can easily be run for other communities where data on canine tick burden and tick life history traits are available, in order to tailor intervention details such as optimal timing, coverage, and re-application frequency even when public health resources are limited.
我们探索了一个“易感-感染-恢复”的隔间模型,以优先考虑和测试基于狗和蜱的干预措施对落基山斑疹热及其蜱媒血根头蜱的有效性。面对日益严重的城市RMSF流行,特别是针对边缘社区,包括全部或部分犬类扑杀、生育控制和财产限制;对狗和环境杀螨剂;针对公共卫生工作者和高危居民的教育和意识项目是不可持续的资源密集型项目,在管理很难控制的蜱虫方面可能缺乏效力。我们的模型使我们能够制定干预措施战略,并以与下加利福尼亚州恩塞纳达流行病相关的参数为例,制定针对RMSF的优化运动。结合对狗使用杀螨剂和环境优化的成功,通过长达10年没有新的犬类病例(人类病例的代表)以及减少蜱虫负担来衡量。当运动在冬季或春季开始并达到至少60%的覆盖率时,成功更大。这种组合比单独使用狗或环境杀螨剂、扑杀狗(只成功清除了100%的狗)和绝育运动(没有减少蜱虫负担)要成功得多。然而,作为杀螨运动的辅助手段,室外狗的绝育有助于稳定犬类数量并鼓励群体免疫。虽然Ensenada是参数化的,但该模型可以很容易地用于其他社区,在那里可以获得犬蜱负担和蜱生活史特征的数据,以便在公共卫生资源有限的情况下定制干预细节,如最佳时间、覆盖范围和重新应用频率。
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引用次数: 0
Avian influenza virus dynamics in poultry and the environment: an eight-year longitudinal study in the southwestern Poyang Lake region of China 家禽中禽流感病毒动态与环境:中国西南鄱阳湖地区8年纵向研究
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-11 DOI: 10.1016/j.idm.2025.06.002
Wentao Song , Fenglan He , Zhiqiang Deng , Maohong Hu , Kang Fang , Wenjuan Cheng , Jingwen Wu , Xi Wang , Guoyin Fan , Lingyan Kong , Yisheng Zhou , Kangguo Li , Buasiyamu Abudunaibi , Xiuhua Kang , Tianxin Xiang , Hui Li , Tianmu Chen
Surveillance of the Avian influenza virus serves as the first line of defense, encompassing monitoring of both animals and environment. These approaches vary across countries due to differences in epidemiology and public health policies. We conducted an eight-year active surveillance program in the Poyang Lake region, a critical wintering site along the East Asian-Australasian Flyway, to investigate the correlation between poultry and environmental samples. From February 2017 to June 2024, 7570 poultry and environmental samples were collected and tested in Nanchang, the largest city in the Poyang Lake region, revealing an overall avian influenza positivity rate of 40.1 %. In 2017, the poultry and environmental positivity rates were 16.9 % and 15.5 %, respectively. By 2024, these rates had risen to 69.4 % and 77.7 %, respectively, with significant and consistent annual increases observed in both environmental and poultry samples. Specifically, in poultry surveillance, chickens (54.2 %) showed higher overall AIV positivity rates compared to ducks (30.6 %), and oropharyngeal swabs (45.5 %) demonstrated greater sensitivity than cloacal swabs (22.3 %). Analysis of environmental samples revealed that, compared with smear samples (39.0 %) and fecal samples (30.9 %), sewage samples (46.5 %) exhibit superior sensitivity. Correlation and wavelet coherence analyses revealed a significant relationship between environmental and poultry samples. In scenarios where poultry sampling is unavailable, environmental surveillance can complement and potentially serve as an alternative to poultry surveillance.
对禽流感病毒的监测是第一道防线,包括对动物和环境的监测。由于流行病学和公共卫生政策的差异,这些方法因国家而异。在东亚-澳大拉西亚迁徙路线上的重要越冬地点鄱阳湖地区进行了为期8年的主动监测,以调查家禽与环境样本之间的相关性。2017年2月至2024年6月,在鄱阳湖地区最大城市南昌市采集家禽和环境样本7570份,检测结果显示禽流感总体阳性率为40.1%。2017年家禽和环境阳性率分别为16.9%和15.5%。到2024年,这些比率分别上升到69.4%和77.7%,在环境和家禽样本中均观察到显著且持续的年度增长。具体来说,在家禽监测中,鸡(54.2%)比鸭(30.6%)表现出更高的总体AIV阳性率,口咽拭子(45.5%)比肛肠拭子(22.3%)表现出更高的敏感性。环境样本分析显示,与涂片样本(39.0%)和粪便样本(30.9%)相比,污水样本(46.5%)表现出优越的敏感性。相关分析和小波相干分析揭示了环境和家禽样本之间的显著相关性。在无法获得家禽抽样的情况下,环境监测可作为家禽监测的补充和潜在替代方法。
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引用次数: 0
Estimating undiagnosed HIV infections by age group in Japan: an extended age-dependent back-calculation 日本按年龄组估计未确诊的艾滋病毒感染:一个扩展的年龄依赖的反向计算
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-06 DOI: 10.1016/j.idm.2025.06.001
Seiko Fujiwara , Hiroshi Nishiura , Takuma Shirasaka , Akifumi Imamura
Understanding the number of undiagnosed HIV-infected individuals by age is essential for improving the test-and-treat strategy. We developed an extended back-calculation by age group to investigate the situation in Japan, describing the data-generating process of AIDS cases and HIV diagnoses as a function of age and time. We considered the incubation period as a function of both age and time since infection, and estimated the number of new HIV infections and annual diagnosis rate by age and time. The diagnosed proportion of HIV infections at the end of 2022 was estimated to be 93.2 % (95 % CI: 90.2, 95.8) in their 20s, 90.4 % (95 % CI: 87.0, 93.7) in their 40s, 90.3 % (95 % CI: 86.9, 93.5) in their 50s or older, and 89.4 % (95 % CI: 85.1, 93.2) in their 30s. The annual rate of diagnosis of people in their 40s decreased from 16.9 % in 2015–2019 to 14.8 % in 2020–22. Despite increasing trend in diagnostic rate, the estimate for those in their 50s was as small as 13.6 % (95 % CI: 8.5, 19.4) in 2020–2022. We identified a difficulty in diagnosing HIV-infected individuals aged 40 and older. The absolute number of infections is greater among those in their 30s than 40s, but the AIDS incidence is the opposite, suggesting that older individuals would require more customized (and easy to access) opportunities for diagnosis.
了解按年龄划分的未确诊艾滋病毒感染者的数量对于改进检测和治疗策略至关重要。我们开发了一种扩展的按年龄组反向计算来调查日本的情况,描述了艾滋病病例和艾滋病毒诊断的数据生成过程作为年龄和时间的函数。我们将潜伏期视为感染后年龄和时间的函数,并按年龄和时间估计新发HIV感染人数和年诊断率。到2022年底,诊断出的艾滋病毒感染比例估计为20多岁的93.2% (95% CI: 90.2, 95.8), 40多岁的90.4% (95% CI: 87.0, 93.7), 50多岁或以上的90.3% (95% CI: 86.9, 93.5), 30多岁的89.4% (95% CI: 85.1, 93.2)。40多岁人群的年诊断率从2015-2019年的16.9%下降到2020 - 2022年的14.8%。尽管诊断率呈上升趋势,但在2020-2022年,50多岁人群的诊断率估计只有13.6% (95% CI: 8.5, 19.4)。我们发现诊断40岁及以上的艾滋病毒感染者存在困难。在30多岁的人群中,感染的绝对数量比40多岁的人群要多,但艾滋病的发病率恰恰相反,这表明年龄较大的人群需要更多定制的(而且容易获得的)诊断机会。
{"title":"Estimating undiagnosed HIV infections by age group in Japan: an extended age-dependent back-calculation","authors":"Seiko Fujiwara ,&nbsp;Hiroshi Nishiura ,&nbsp;Takuma Shirasaka ,&nbsp;Akifumi Imamura","doi":"10.1016/j.idm.2025.06.001","DOIUrl":"10.1016/j.idm.2025.06.001","url":null,"abstract":"<div><div>Understanding the number of undiagnosed HIV-infected individuals by age is essential for improving the test-and-treat strategy. We developed an extended back-calculation by age group to investigate the situation in Japan, describing the data-generating process of AIDS cases and HIV diagnoses as a function of age and time. We considered the incubation period as a function of both age and time since infection, and estimated the number of new HIV infections and annual diagnosis rate by age and time. The diagnosed proportion of HIV infections at the end of 2022 was estimated to be 93.2 % (95 % CI: 90.2, 95.8) in their 20s, 90.4 % (95 % CI: 87.0, 93.7) in their 40s, 90.3 % (95 % CI: 86.9, 93.5) in their 50s or older, and 89.4 % (95 % CI: 85.1, 93.2) in their 30s. The annual rate of diagnosis of people in their 40s decreased from 16.9 % in 2015–2019 to 14.8 % in 2020–22. Despite increasing trend in diagnostic rate, the estimate for those in their 50s was as small as 13.6 % (95 % CI: 8.5, 19.4) in 2020–2022. We identified a difficulty in diagnosing HIV-infected individuals aged 40 and older. The absolute number of infections is greater among those in their 30s than 40s, but the AIDS incidence is the opposite, suggesting that older individuals would require more customized (and easy to access) opportunities for diagnosis.</div></div>","PeriodicalId":36831,"journal":{"name":"Infectious Disease Modelling","volume":"10 4","pages":"Pages 1116-1125"},"PeriodicalIF":8.8,"publicationDate":"2025-06-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144263741","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modelling the potential impact of TB-funded prevention programs on the transmission dynamics of TB 模拟结核病资助的预防规划对结核病传播动态的潜在影响
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-02 DOI: 10.1016/j.idm.2025.05.010
V.M. Mbalilo , F. Nyabadza , S.P. Gatyeni
Tuberculosis (TB) continues to be a major global health challenge, with millions of new cases and deaths each year despite the massive efforts and funding put in the fight against the disease. In this paper, we develop a mathematical model to evaluate the impact of TB-funded prevention programs on the transmission dynamics of TB. The model incorporates stages of TB infection (latent and active), and accounts for the effects of treatment, funding and TB-funded prevention programs. Our analysis shows that increased funding and enhanced prevention programs reduce the number of active TB cases, thereby decreasing the reproduction number and TB endemicity. Specifically, higher funding rates lead to improved prevention and treatment outcomes, resulting in the lowering of the effective reproduction number (R0) and reduced transmission. The model's steady states are determined and it is shown that the model has a disease-free equilibrium that is locally asymptotically stable whenever R0<1 and multiple endemic equilibria for R0c<R0<1 and a unique endemic equilibrium for R0>1. The model is shown to exhibit a backward bifurcation that vanishes as the funding for TB is increased. The paper also highlights that treatment alone, while beneficial, is less effective than a combined strategy involving funding and prevention. Numerical simulations are carried out and the influences of various parameters on the effective reproduction number are investigated. The implications of TB-funded prevention programs on TB dynamics and control of TB are discussed and valuable insights for policymakers in designing effective TB control programs are highlighted.
结核病仍然是一项重大的全球卫生挑战,尽管为防治这一疾病作出了巨大努力和投入了大量资金,但每年仍有数百万新病例和死亡。在本文中,我们开发了一个数学模型来评估结核病资助的预防项目对结核病传播动态的影响。该模型纳入了结核病感染的各个阶段(潜伏期和活动性),并考虑了治疗、供资和结核病资助的预防规划的效果。我们的分析表明,增加资金和加强预防计划减少了活动性结核病病例的数量,从而降低了再生产数量和结核病流行。具体而言,较高的供资率可改善预防和治疗结果,从而降低有效繁殖数(R0)并减少传播。确定了模型的稳态,并证明了模型具有在R0<;1时局部渐近稳定的无病平衡点和R0<; R0<;1时的多个地方性平衡点以及R0>;1时的唯一地方性平衡点。该模型显示出一种后向分叉,这种分叉随着结核病资金的增加而消失。这篇论文还强调,单独治疗虽然有益,但不如涉及资助和预防的综合战略有效。进行了数值模拟,研究了各参数对有效再生数的影响。讨论了结核病资助的预防规划对结核病动态和结核病控制的影响,并强调了决策者在设计有效的结核病控制规划方面的宝贵见解。
{"title":"Modelling the potential impact of TB-funded prevention programs on the transmission dynamics of TB","authors":"V.M. Mbalilo ,&nbsp;F. Nyabadza ,&nbsp;S.P. Gatyeni","doi":"10.1016/j.idm.2025.05.010","DOIUrl":"10.1016/j.idm.2025.05.010","url":null,"abstract":"<div><div>Tuberculosis (TB) continues to be a major global health challenge, with millions of new cases and deaths each year despite the massive efforts and funding put in the fight against the disease. In this paper, we develop a mathematical model to evaluate the impact of TB-funded prevention programs on the transmission dynamics of TB. The model incorporates stages of TB infection (latent and active), and accounts for the effects of treatment, funding and TB-funded prevention programs. Our analysis shows that increased funding and enhanced prevention programs reduce the number of active TB cases, thereby decreasing the reproduction number and TB endemicity. Specifically, higher funding rates lead to improved prevention and treatment outcomes, resulting in the lowering of the effective reproduction number <span><math><mrow><mo>(</mo><mrow><msub><mrow><mi>R</mi></mrow><mrow><mn>0</mn></mrow></msub></mrow><mo>)</mo></mrow></math></span> and reduced transmission. The model's steady states are determined and it is shown that the model has a disease-free equilibrium that is locally asymptotically stable whenever <span><math><msub><mrow><mi>R</mi></mrow><mrow><mn>0</mn></mrow></msub><mo>&lt;</mo><mn>1</mn></math></span> and multiple endemic equilibria for <span><math><msubsup><mrow><mi>R</mi></mrow><mrow><mn>0</mn></mrow><mrow><mi>c</mi></mrow></msubsup><mo>&lt;</mo><msub><mrow><mi>R</mi></mrow><mrow><mn>0</mn></mrow></msub><mo>&lt;</mo><mn>1</mn></math></span> and a unique endemic equilibrium for <span><math><msub><mrow><mi>R</mi></mrow><mrow><mn>0</mn></mrow></msub><mo>&gt;</mo><mn>1</mn></math></span>. The model is shown to exhibit a backward bifurcation that vanishes as the funding for TB is increased. The paper also highlights that treatment alone, while beneficial, is less effective than a combined strategy involving funding and prevention. Numerical simulations are carried out and the influences of various parameters on the effective reproduction number are investigated. The implications of TB-funded prevention programs on TB dynamics and control of TB are discussed and valuable insights for policymakers in designing effective TB control programs are highlighted.</div></div>","PeriodicalId":36831,"journal":{"name":"Infectious Disease Modelling","volume":"10 4","pages":"Pages 1037-1054"},"PeriodicalIF":8.8,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144241896","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Trends and projections of hepatitis E incidence in Jiangsu Province of eastern China from 2007 to 2021: An analysis based on age-period-cohort models 2007 - 2021年中国东部江苏省戊型肝炎发病率趋势与预测:基于年龄期队列模型的分析
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-06-02 DOI: 10.1016/j.idm.2025.05.011
Xiaoqing Cheng , Zehui Zhang , Weili Kang , Xuefeng Zhang , Hui Peng , Changjun Bao

Objective

This study aims to evaluate Hepatitis E incidence trends by age, period, and birth cohort in Jiangsu Province from 2007 to 2021 and project the future trends.

Methods

Data on Hepatitis E cases in Jiangsu Province were sourced from the National Notifiable Disease Reporting System. Joinpoint regression models analyzed annual percentage changes. Age-period-cohort model decomposed and Bayesian age-period-cohort projected the trends.

Results

Between 2007 and 2021, a total of 46180 cases of Hepatitis E were reported. Both the overall and sex-specific trends revealed a single inflection point, and the average annual percentage change was -3.63% (95% CI: -7.33% ∼ -0.87%, P < 0.05) for male. The net drift value is -5.13%, with -6.28% for males and -2.39% for females. Significant local drift variations were observed, especially in the 20–24 age group (-11.51%). The age curve indicated the peak at 15.94 per 100000 for males in the 25–29 age group and at 4.42 per 100000 for females in the 50–54 age group. The period effect demonstrated the incidence rates for females lagged behind for males. The cohort effect indicated earlier cohorts exhibited higher incidence rates. projected an increase in incidence rates for the 65–69 age group from 2022 to 2031, with a overall incidence rate of 11.31 (95% CI: 2.80 ∼ 31.58) per 100000 in 2031.

Conclusion

Hepatitis E incidence has decreased from 2007 to 2021 for male in Jiangsu Province, and Age-period-cohort analysis revealed sex differences, which may be associated with different exposure routes. Continuous surveillance and timely interventions are essential to 65–69 age group.
目的探讨2007年至2021年江苏省戊型肝炎发病率的年龄、时期和出生队列趋势,并预测未来趋势。方法江苏省戊型肝炎病例数据来源于国家传染病报告系统。接合点回归模型分析了年百分比变化。年龄-时期-队列模型分解,贝叶斯年龄-时期-队列预测趋势。结果2007年至2021年,共报告戊型肝炎46180例。总体趋势和性别特异性趋势均显示单一拐点,年平均百分比变化为-3.63% (95% CI: -7.33% ~ -0.87%, P <;0.05)。净漂值为-5.13%,雄性为-6.28%,雌性为-2.39%。局部漂移差异显著,特别是在20-24岁年龄组(-11.51%)。年龄曲线显示,25-29岁年龄组男性的峰值为15.94 / 100000,50-54岁年龄组女性的峰值为4.42 / 100000。经期效应表明,女性的发病率落后于男性。队列效应表明,较早的队列表现出较高的发病率。预计从2022年到2031年,65-69岁年龄组的发病率将增加,2031年的总发病率为11.31 / 100000 (95% CI: 2.80 ~ 31.58)。结论2007 - 2021年,江苏省男性戊型肝炎发病率呈下降趋势,年龄-时期队列分析显示出性别差异,这可能与不同的暴露途径有关。持续监测和及时干预对65-69岁年龄组至关重要。
{"title":"Trends and projections of hepatitis E incidence in Jiangsu Province of eastern China from 2007 to 2021: An analysis based on age-period-cohort models","authors":"Xiaoqing Cheng ,&nbsp;Zehui Zhang ,&nbsp;Weili Kang ,&nbsp;Xuefeng Zhang ,&nbsp;Hui Peng ,&nbsp;Changjun Bao","doi":"10.1016/j.idm.2025.05.011","DOIUrl":"10.1016/j.idm.2025.05.011","url":null,"abstract":"<div><h3>Objective</h3><div>This study aims to evaluate Hepatitis E incidence trends by age, period, and birth cohort in Jiangsu Province from 2007 to 2021 and project the future trends.</div></div><div><h3>Methods</h3><div>Data on Hepatitis E cases in Jiangsu Province were sourced from the National Notifiable Disease Reporting System. Joinpoint regression models analyzed annual percentage changes. Age-period-cohort model decomposed and Bayesian age-period-cohort projected the trends.</div></div><div><h3>Results</h3><div>Between 2007 and 2021, a total of 46180 cases of Hepatitis E were reported. Both the overall and sex-specific trends revealed a single inflection point, and the average annual percentage change was -3.63% (95% CI: -7.33% ∼ -0.87%, <em>P</em> &lt; 0.05) for male. The net drift value is -5.13%, with -6.28% for males and -2.39% for females. Significant local drift variations were observed, especially in the 20–24 age group (-11.51%). The age curve indicated the peak at 15.94 per 100000 for males in the 25–29 age group and at 4.42 per 100000 for females in the 50–54 age group. The period effect demonstrated the incidence rates for females lagged behind for males. The cohort effect indicated earlier cohorts exhibited higher incidence rates. projected an increase in incidence rates for the 65–69 age group from 2022 to 2031, with a overall incidence rate of 11.31 (95% CI: 2.80 ∼ 31.58) per 100000 in 2031.</div></div><div><h3>Conclusion</h3><div>Hepatitis E incidence has decreased from 2007 to 2021 for male in Jiangsu Province, and Age-period-cohort analysis revealed sex differences, which may be associated with different exposure routes. Continuous surveillance and timely interventions are essential to 65–69 age group.</div></div>","PeriodicalId":36831,"journal":{"name":"Infectious Disease Modelling","volume":"10 4","pages":"Pages 1093-1102"},"PeriodicalIF":8.8,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144241898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Regional variation and epidemiological insights in malaria underestimation in Cameroon 喀麦隆疟疾低估的区域差异和流行病学见解
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-05-30 DOI: 10.1016/j.idm.2025.05.006
Sarafa A. Iyaniwura , Qing Han , Ngem Bede Yong , Ghislain Rutayisire , Agnes Adom-Konadu , Okwen Patrick Mbah , David Poumo Tchouassi , Kingsley Badu , Jude Dzevela Kong

Background

Despite significant global effort to control and eradicate malaria, many cases and deaths are still reported yearly. These efforts are hindered by several factors, including the severe underestimation of cases and deaths, especially in Africa.

Methods

We used a mathematical model, incorporating the underestimation of cases and seasonality in mosquito biting rate, to study the malaria dynamics in Cameroon. Using a Bayesian inference framework, we calibrated our model to the monthly reported malaria cases in ten regions of Cameroon from 2019 to 2021 to quantify the underestimation of cases and estimate other important epidemiological parameters. We performed Hierarchical Clustering on Principal Components analysis to understand regional disparities, looking at underestimation rates, population sizes, healthcare personnel, and healthcare facilities per 1000 people.

Results

We found varying levels of case underestimation across regions, with the East region having the lowest (14 %) and the Northwest having the highest (70 %). The mosquito biting rate peaks once every year in most regions, except in the Northwest where it peaks every 6.02 months and in Littoral every 15 months. We estimated a median mosquito biting rate of over 5 bites/day for most regions with Littoral having the highest (9.86 bites/day). Two regions have rates below five: Adamawa (4.78 bites/day) and East (4.64 bites/day).

Conclusions

The low case estimation underscores the pressing requirement to bolster reporting and surveillance systems. Regions in Cameroon display a range of unique features contributing to the differing levels of underestimation. These distinctions should be considered when evaluating the efficacy of community-based interventions.
尽管全球为控制和根除疟疾作出了重大努力,但每年仍有许多病例和死亡报告。这些努力受到若干因素的阻碍,包括严重低估了病例和死亡人数,特别是在非洲。方法采用低估病例数和蚊虫叮咬率季节性相结合的数学模型,研究喀麦隆疟疾动态。使用贝叶斯推断框架,我们将模型校准为2019年至2021年喀麦隆10个地区每月报告的疟疾病例,以量化病例低估并估计其他重要流行病学参数。我们对主成分进行了层次聚类分析,以了解地区差异,查看低估率、人口规模、医疗保健人员和每1000人的医疗保健设施。结果我们发现不同地区的病例低估程度不同,东部地区最低(14%),西北地区最高(70%)。蚊虫叮咬率除西北地区每6.02个月出现一次高峰,沿海地区每15个月出现一次高峰外,其余地区每年出现一次高峰。我们估计大多数地区的蚊子叮咬率中位数超过5次/天,其中沿海地区最高(9.86次/天)。有两个地区的叮咬率低于5:阿达马瓦(4.78次/天)和东部(4.64次/天)。结论低病例估计强调了加强报告和监测系统的迫切需要。喀麦隆各地区表现出一系列独特的特征,导致不同程度的低估。在评价以社区为基础的干预措施的效果时,应考虑到这些区别。
{"title":"Regional variation and epidemiological insights in malaria underestimation in Cameroon","authors":"Sarafa A. Iyaniwura ,&nbsp;Qing Han ,&nbsp;Ngem Bede Yong ,&nbsp;Ghislain Rutayisire ,&nbsp;Agnes Adom-Konadu ,&nbsp;Okwen Patrick Mbah ,&nbsp;David Poumo Tchouassi ,&nbsp;Kingsley Badu ,&nbsp;Jude Dzevela Kong","doi":"10.1016/j.idm.2025.05.006","DOIUrl":"10.1016/j.idm.2025.05.006","url":null,"abstract":"<div><h3>Background</h3><div>Despite significant global effort to control and eradicate malaria, many cases and deaths are still reported yearly. These efforts are hindered by several factors, including the severe underestimation of cases and deaths, especially in Africa.</div></div><div><h3>Methods</h3><div>We used a mathematical model, incorporating the underestimation of cases and seasonality in mosquito biting rate, to study the malaria dynamics in Cameroon. Using a Bayesian inference framework, we calibrated our model to the monthly reported malaria cases in ten regions of Cameroon from 2019 to 2021 to quantify the underestimation of cases and estimate other important epidemiological parameters. We performed Hierarchical Clustering on Principal Components analysis to understand regional disparities, looking at underestimation rates, population sizes, healthcare personnel, and healthcare facilities per 1000 people.</div></div><div><h3>Results</h3><div>We found varying levels of case underestimation across regions, with the East region having the lowest (14 %) and the Northwest having the highest (70 %). The mosquito biting rate peaks once every year in most regions, except in the Northwest where it peaks every 6.02 months and in Littoral every 15 months. We estimated a median mosquito biting rate of over 5 bites/day for most regions with Littoral having the highest (9.86 bites/day). Two regions have rates below five: Adamawa (4.78 bites/day) and East (4.64 bites/day).</div></div><div><h3>Conclusions</h3><div>The low case estimation underscores the pressing requirement to bolster reporting and surveillance systems. Regions in Cameroon display a range of unique features contributing to the differing levels of underestimation. These distinctions should be considered when evaluating the efficacy of community-based interventions.</div></div>","PeriodicalId":36831,"journal":{"name":"Infectious Disease Modelling","volume":"10 4","pages":"Pages 1103-1115"},"PeriodicalIF":8.8,"publicationDate":"2025-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144263740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of spontaneous clearance on fractional analysis of HBV 自发清除在HBV分数分析中的作用
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-05-27 DOI: 10.1016/j.idm.2025.05.009
O.Y. Oludoun , O. Abiodun , B. Gbadamosi , J.K. Oladejo , E.I. Akinola , O.N. Emuoyibofarhe , O. Adebimpe
Hepatitis B virus (HBV) remains a persistent global health concern, with recent research advancing our understanding of its transmission dynamics and potential interventions.The present study proposes a mathematical model of Hepatitis B Virus (HBV) epidemics using fractional calculus, with a special emphasis on the influence of spontaneous clearance across diverse population groups. Using the Atangana-Baleanu derivative, the model accounts for the complications of vertical and horizontal transmission, therapy, immunisation, and spontaneous clearance. Numerical simulations with different fractional orders demonstrate how spontaneous clearance affects the dynamics of susceptible, chronic, treated, and recovered populations. The findings indicate that in vulnerable populations, increasing spontaneous clearance reduces vulnerability because people either clear the illness naturally or gain resistance.However, in chronic populations, spontaneous clearance is insufficient for complete recovery without treatment. The combination of therapy and spontaneous clearance improves the treated population, demonstrating the beneficial effects of both medical intervention and natural immunity. Furthermore, increased spontaneous clearance boosts the restored population, demonstrating the immune system's ability to eliminate the virus over time. The fractional-order framework captures the memory effect of illness development, revealing how healing is time-dependent and how immune responses have a long-term impact. This study emphasises the need of combining spontaneous clearance with medical therapies to improve HBV management and public health consequences. Hepatitis B virus (HBV) remains a persistent global health concern, with recent research advancing our understanding of its transmission dynamics and potential interventions. This study presents a fractional mathematical model of HBV infection, employing the Atangana-Baleanu derivative with Mittag-Leffler kernels to capture memory-dependent and nonlocal transmission processes. The model integrates vertical and horizontal transmission pathways, treatment strategies, immunization efforts, and spontaneous clearance, providing a nuanced perspective compared to classical models. Stability conditions are analyzed through fixed-point theory, revealing the global stability of both disease-free and endemic states under specific values of the basic reproduction number R0. Numerical simulations demonstrate the model's effectiveness in capturing the complex dynamics of HBV, with fractional-order parameters enhancing prediction accuracy. This approach offers valuable insights into optimizing public health interventions and treatment strategies for managing HBV infections effectively.
乙型肝炎病毒(HBV)仍然是一个持续的全球健康问题,最近的研究促进了我们对其传播动态和潜在干预措施的理解。本研究提出了一个使用分数微积分的乙型肝炎病毒(HBV)流行的数学模型,特别强调了不同人群中自发清除的影响。使用Atangana-Baleanu衍生模型,该模型考虑了垂直和水平传播、治疗、免疫和自发清除的并发症。不同分数阶的数值模拟显示了自发清除如何影响易感、慢性、治疗和恢复种群的动力学。研究结果表明,在脆弱人群中,自发清除的增加减少了脆弱性,因为人们要么自然清除疾病,要么获得抵抗力。然而,在慢性人群中,自发清除不足以在没有治疗的情况下完全康复。治疗和自发清除的结合改善了治疗人群,证明了医疗干预和自然免疫的有益效果。此外,增加的自发清除率促进了恢复的人口,表明免疫系统有能力随着时间的推移消灭病毒。分数阶框架捕捉了疾病发展的记忆效应,揭示了愈合是如何依赖时间的,以及免疫反应是如何产生长期影响的。这项研究强调需要将自发清除与医学治疗相结合,以改善HBV管理和公共卫生后果。乙型肝炎病毒(HBV)仍然是一个持续的全球健康问题,最近的研究促进了我们对其传播动态和潜在干预措施的理解。本研究提出了HBV感染的分数数学模型,采用Atangana-Baleanu衍生物与Mittag-Leffler核来捕捉记忆依赖和非局部传播过程。该模型整合了垂直和水平传播途径、治疗策略、免疫努力和自发清除,与经典模型相比,提供了一个细致入微的视角。通过不动点理论分析了稳定性条件,揭示了在基本繁殖数R0的特定值下,无病状态和地方性状态的全局稳定性。数值模拟证明了该模型在捕获HBV复杂动力学方面的有效性,分数阶参数提高了预测精度。这种方法为优化公共卫生干预措施和有效管理HBV感染的治疗策略提供了有价值的见解。
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引用次数: 0
Modeling the impact of hospitalization-induced behavioral changes on the spread of COVID-19 in New York City 模拟住院引起的行为变化对COVID-19在纽约市传播的影响
IF 8.8 3区 医学 Q1 Medicine Pub Date : 2025-05-27 DOI: 10.1016/j.idm.2025.05.001
Alice Oveson , Michelle Girvan , Abba B. Gumel
The COVID-19 pandemic, caused by SARS-CoV-2, highlighted heterogeneities in human behavior and attitudes of individuals with respect to adherence or lack thereof to public health-mandated intervention and mitigation measures. This study is based on using mathematical modeling approaches, backed by data analytics and computation, to theoretically assess the impact of human behavioral changes on the trajectory, burden, and control of the COVID-19 pandemic during the first two waves in New York City. A novel behavior-epidemiology model, which considers n heterogeneous behavioral groups based on level of risk tolerance and distinguishes behavioral changes by social and disease-related motivations (such as peer-influence and fear of disease-related hospitalizations), is developed. In addition to rigorously analyzing the basic qualitative features of this model, a special case is considered where the total population is stratified into two groups: risk-averse (Group 1) and risk-tolerant (Group 2). The 2-group model was calibrated and validated using daily hospitalization data for New York City during the first wave, and the calibrated model was used to predict the data for the second wave. The 2-group model predicts the daily hospitalizations during the second wave almost perfectly, compared to the version without behavioral considerations, which fails to accurately predict the second wave. This suggests that epidemic models of the COVID-19 pandemic that do not explicitly account for heterogeneities in human behavior may fail to accurately predict the trajectory and burden of the pandemic in a population. Numerical simulations of the calibrated 2-group behavior model showed that while the dynamics of the COVID-19 pandemic during the first wave was largely influenced by the behavior of the risk-tolerant (Group 2) individuals, the dynamics during the second wave was influenced by the behavior of individuals in both groups. It was also shown that disease-motivated behavioral changes (i.e., behavior changes due to the level of COVID-19 hospitalizations in the community) had greater influence in significantly reducing COVID-19 morbidity and mortality than behavior changes due to the level of peer or social influence or pressure. Finally, it is shown that the initial proportion of members in the community that are risk-averse (i.e., the proportion of individuals in Group 1 at the beginning of the pandemic) and the early and effective implementation of non-pharmaceutical interventions have major impacts in reducing the size and burden of the pandemic (particularly the total COVID-19 mortality in New York City during the second wave).
由SARS-CoV-2引起的COVID-19大流行突出表明,在遵守或不遵守公共卫生规定的干预和缓解措施方面,人类行为和个人态度存在异质性。本研究基于数学建模方法,以数据分析和计算为基础,从理论上评估纽约市前两波COVID-19大流行期间人类行为变化对其轨迹、负担和控制的影响。提出了一种新的行为流行病学模型,该模型考虑了基于风险耐受水平的不同行为群体,并根据社会和疾病相关动机(如同伴影响和对疾病相关住院治疗的恐惧)区分了行为变化。除了严格分析该模型的基本定性特征外,还考虑了一种特殊情况,即将总人口分为两组:风险厌恶组(第1组)和风险容忍组(第2组)。使用第一波期间纽约市的每日住院数据对两组模型进行校准和验证,并使用校准后的模型预测第二波的数据。与没有考虑行为因素的模型相比,两组模型几乎完美地预测了第二波期间的每日住院人数,而后者未能准确预测第二波。这表明,没有明确考虑人类行为异质性的COVID-19大流行模型可能无法准确预测大流行在人群中的轨迹和负担。校准后的两组行为模型的数值模拟表明,第一波期间的COVID-19大流行动态在很大程度上受到风险耐受(第二组)个体行为的影响,第二波期间的动态受到两组个体行为的影响。研究还表明,疾病驱动的行为改变(即由于社区COVID-19住院治疗水平而导致的行为改变)在显著降低COVID-19发病率和死亡率方面的影响大于由于同伴或社会影响或压力水平而导致的行为改变。最后,研究表明,社区中厌恶风险的成员的初始比例(即大流行开始时属于第1组的个人比例)和早期有效实施非药物干预措施对减少大流行的规模和负担(特别是第二波纽约市COVID-19总死亡率)具有重大影响。
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引用次数: 0
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Infectious Disease Modelling
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