Pub Date : 2023-01-09DOI: 10.1007/s41109-023-00532-z
Md Ashraf Ahmed, H. M. I. Kays, A. M. Sadri
{"title":"Centrality-based lane interventions in road networks for improved level of service: the case of downtown Boise, Idaho","authors":"Md Ashraf Ahmed, H. M. I. Kays, A. M. Sadri","doi":"10.1007/s41109-023-00532-z","DOIUrl":"https://doi.org/10.1007/s41109-023-00532-z","url":null,"abstract":"","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"1-19"},"PeriodicalIF":2.2,"publicationDate":"2023-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41339769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.1007/s41109-022-00526-3
Lynnette Hui Xian Ng, Kathleen M Carley
Social media has provided a citizen voice, giving rise to grassroots collective action, where users deploy a concerted effort to disseminate online narratives and even carry out offline protests. Sometimes these collective action are aided by inorganic synchronization, which arise from bot actors. It is thus important to identify the synchronicity of emerging discourse on social media and the indications of organic/inorganic activity within the conversations. This provides a way of profiling an event for possibility of offline protests and violence. In this study, we build on past definitions of synchronous activity on social media- simultaneous user action-and develop a Combined Synchronization Index (CSI) which adopts a hierarchical approach in measuring user synchronicity. We apply this index on six political and social activism events on Twitter and analyzed three action types: synchronicity by hashtag, URL and @mentions.The CSI provides an overall quantification of synchronization across all action types within an event, which allows ranking of a spectrum of synchronicity across the six events. Human users have higher synchronous scores than bot users in most events; and bots and humans exhibits the most synchronized activities across all events as compared to other pairs (i.e., bot-bot and human-human). We further rely on the harmony and dissonance of CSI-Network scores with network centrality metrics to observe the presence of organic/inorganic synchronization. We hope this work aids in investigating synchronized action within social media in a collective manner.
{"title":"A combined synchronization index for evaluating collective action social media.","authors":"Lynnette Hui Xian Ng, Kathleen M Carley","doi":"10.1007/s41109-022-00526-3","DOIUrl":"https://doi.org/10.1007/s41109-022-00526-3","url":null,"abstract":"<p><p>Social media has provided a citizen voice, giving rise to grassroots collective action, where users deploy a concerted effort to disseminate online narratives and even carry out offline protests. Sometimes these collective action are aided by inorganic synchronization, which arise from bot actors. It is thus important to identify the synchronicity of emerging discourse on social media and the indications of organic/inorganic activity within the conversations. This provides a way of profiling an event for possibility of offline protests and violence. In this study, we build on past definitions of synchronous activity on social media- simultaneous user action-and develop a Combined Synchronization Index (CSI) which adopts a hierarchical approach in measuring user synchronicity. We apply this index on six political and social activism events on Twitter and analyzed three action types: synchronicity by hashtag, URL and @mentions.The CSI provides an overall quantification of synchronization across all action types within an event, which allows ranking of a spectrum of synchronicity across the six events. Human users have higher synchronous scores than bot users in most events; and bots and humans exhibits the most synchronized activities across all events as compared to other pairs (i.e., bot-bot and human-human). We further rely on the harmony and dissonance of CSI-Network scores with network centrality metrics to observe the presence of organic/inorganic synchronization. We hope this work aids in investigating synchronized action within social media in a collective manner.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"1"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9809510/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10509545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-09-22DOI: 10.1007/s41109-023-00596-x
Christoph Gote, Giona Casiraghi, Frank Schweitzer, Ingo Scholtes
Apart from nodes and links, for many networked systems, we have access to data on paths, i.e., collections of temporally ordered variable-length node sequences that are constrained by the system's topology. Understanding the patterns in such data is key to advancing our understanding of the structure and dynamics of complex systems. Moreover, the ability to accurately model and predict paths is important for engineered systems, e.g., to optimise supply chains or provide smart mobility services. Here, we introduce MOGen, a generative modelling framework that enables both next-element and out-of-sample prediction in paths with high accuracy and consistency. It features a model selection approach that automatically determines the optimal model directly from data, effectively making MOGen parameter-free. Using empirical data, we show that our method outperforms state-of-the-art sequence modelling techniques. We further introduce a mathematical formalism that links higher-order models of paths to transition matrices of random walks in multi-layer networks.
{"title":"Predicting variable-length paths in networked systems using multi-order generative models.","authors":"Christoph Gote, Giona Casiraghi, Frank Schweitzer, Ingo Scholtes","doi":"10.1007/s41109-023-00596-x","DOIUrl":"10.1007/s41109-023-00596-x","url":null,"abstract":"<p><p>Apart from nodes and links, for many networked systems, we have access to data on paths, i.e., collections of temporally ordered variable-length node sequences that are constrained by the system's topology. Understanding the patterns in such data is key to advancing our understanding of the structure and dynamics of complex systems. Moreover, the ability to accurately model and predict paths is important for engineered systems, e.g., to optimise supply chains or provide smart mobility services. Here, we introduce MOGen, a generative modelling framework that enables both next-element and out-of-sample prediction in paths with high accuracy and consistency. It features a model selection approach that automatically determines the optimal model directly from data, effectively making MOGen parameter-free. Using empirical data, we show that our method outperforms state-of-the-art sequence modelling techniques. We further introduce a mathematical formalism that links higher-order models of paths to transition matrices of random walks in multi-layer networks.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"68"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10516819/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41151411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-09-21DOI: 10.1007/s41109-023-00595-y
Marzena Fügenschuh, Feng Fu
Incorporating social factors into disease prevention and control efforts is an important undertaking of behavioral epidemiology. The interplay between disease transmission and human health behaviors, such as vaccine uptake, results in complex dynamics of biological and social contagions. Maximizing intervention adoptions via network-based targeting algorithms by harnessing the power of social contagion for behavior and attitude changes largely remains a challenge. Here we address this issue by considering a multiplex network setting. Individuals are situated on two layers of networks: the disease transmission network layer and the peer influence network layer. The disease spreads through direct close contacts while vaccine views and uptake behaviors spread interpersonally within a potentially virtual network. The results of our comprehensive simulations show that network-based targeting with pro-vaccine supporters as initial seeds significantly influences vaccine adoption rates and reduces the extent of an epidemic outbreak. Network targeting interventions are much more effective by selecting individuals with a central position in the opinion network as compared to those grouped in a community or connected professionally. Our findings provide insight into network-based interventions to increase vaccine confidence and demand during an ongoing epidemic.
{"title":"Overcoming vaccine hesitancy by multiplex social network targeting: an analysis of targeting algorithms and implications.","authors":"Marzena Fügenschuh, Feng Fu","doi":"10.1007/s41109-023-00595-y","DOIUrl":"10.1007/s41109-023-00595-y","url":null,"abstract":"<p><p>Incorporating social factors into disease prevention and control efforts is an important undertaking of behavioral epidemiology. The interplay between disease transmission and human health behaviors, such as vaccine uptake, results in complex dynamics of biological and social contagions. Maximizing intervention adoptions via network-based targeting algorithms by harnessing the power of social contagion for behavior and attitude changes largely remains a challenge. Here we address this issue by considering a multiplex network setting. Individuals are situated on two layers of networks: the disease transmission network layer and the peer influence network layer. The disease spreads through direct close contacts while vaccine views and uptake behaviors spread interpersonally within a potentially virtual network. The results of our comprehensive simulations show that network-based targeting with pro-vaccine supporters as initial seeds significantly influences vaccine adoption rates and reduces the extent of an epidemic outbreak. Network targeting interventions are much more effective by selecting individuals with a central position in the opinion network as compared to those grouped in a community or connected professionally. Our findings provide insight into network-based interventions to increase vaccine confidence and demand during an ongoing epidemic.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"67"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514145/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41151470","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The graph-theoretic based studies employing bipartite network approach mostly focus on surveying the statistical properties of the structure and behavior of the network systems under the domain of complex network analysis. They aim to provide the big-picture-view insights of a networked system by looking into the dynamic interaction and relationship among the vertices. Nonetheless, incorporating the features of individual vertex and capturing the dynamic interaction of the heterogeneous local rules governing each of them in the studies is lacking. The methodology in achieving this could hardly be found. Consequently, this study intends to propose a methodology framework that considers the influence of heterogeneous features of each node to the overall network behavior in modeling real-world bipartite network system. The proposed framework consists of three main stages with principal processes detailed in each stage, and three libraries of techniques to guide the modeling activities. It is iterative and process-oriented in nature and allows future network expansion. Two case studies from the domain of communicable disease in epidemiology and habitat suitability in ecology employing this framework are also presented. The results obtained suggest that the methodology could serve as a generic framework in advancing the current state of the art of bipartite network approach.
{"title":"A methodology framework for bipartite network modeling.","authors":"Chin Ying Liew, Jane Labadin, Woon Chee Kok, Monday Okpoto Eze","doi":"10.1007/s41109-023-00533-y","DOIUrl":"https://doi.org/10.1007/s41109-023-00533-y","url":null,"abstract":"<p><p>The graph-theoretic based studies employing bipartite network approach mostly focus on surveying the statistical properties of the structure and behavior of the network systems under the domain of complex network analysis. They aim to provide the big-picture-view insights of a networked system by looking into the dynamic interaction and relationship among the vertices. Nonetheless, incorporating the features of individual vertex and capturing the dynamic interaction of the heterogeneous local rules governing each of them in the studies is lacking. The methodology in achieving this could hardly be found. Consequently, this study intends to propose a methodology framework that considers the influence of heterogeneous features of each node to the overall network behavior in modeling real-world bipartite network system. The proposed framework consists of three main stages with principal processes detailed in each stage, and three libraries of techniques to guide the modeling activities. It is iterative and process-oriented in nature and allows future network expansion. Two case studies from the domain of communicable disease in epidemiology and habitat suitability in ecology employing this framework are also presented. The results obtained suggest that the methodology could serve as a generic framework in advancing the current state of the art of bipartite network approach.</p><p><strong>Graphical abstract: </strong></p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"6"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9844172/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10579008","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.1007/s41109-022-00520-9
Harun Pirim, Morteza Nagahi, Oumaima Larif, Mohammad Nagahisarchoghaei, Raed Jaradat
Systems Thinking (ST) has become essential for practitioners and experts when dealing with turbulent and complex environments. Twitter medium harbors social capital including systems thinkers, however there are limited studies available in the extant literature that investigate how experts' systems thinking skills, if possible at all, can be revealed within Twitter analysis. This study aims to reveal systems thinking levels of experts from their Twitter accounts represented as a network. Unraveling of latent Twitter network clusters ensues the centrality analysis of their follower networks inferred in terms of systems thinking dimensions. COVID-19 emerges as a relevant case study to investigate the relationship between COVID-19 experts' Twitter network and their systems thinking capabilities. A sample of 55 trusted expert Twitter accounts related to COVID-19 has been selected for the current study based on the lists from Forbes, Fortune, and Bustle. The Twitter network has been constructed based on the features extracted from their Twitter accounts. Community detection reveals three distinct groups of experts. In order to relate system thinking qualities to each group, systems thinking dimensions are matched with the follower network characteristics such as node-level metrics and centrality measures including degree, betweenness, closeness and Eigen centrality. Comparison of the 55 expert follower network characteristics elucidates three clusters with significant differences in centrality scores and node-level metrics. The clusters with a higher, medium, lower scores can be classified as Twitter accounts of Holistic thinkers, Middle thinkers, and Reductionist thinkers, respectfully. In conclusion, systems thinking capabilities are traced through unique network patterns in relation to the follower network characteristics associated with systems thinking dimensions.
{"title":"Integrated twitter analysis to distinguish systems thinkers at various levels: a case study of COVID-19.","authors":"Harun Pirim, Morteza Nagahi, Oumaima Larif, Mohammad Nagahisarchoghaei, Raed Jaradat","doi":"10.1007/s41109-022-00520-9","DOIUrl":"https://doi.org/10.1007/s41109-022-00520-9","url":null,"abstract":"<p><p>Systems Thinking (ST) has become essential for practitioners and experts when dealing with turbulent and complex environments. Twitter medium harbors social capital including systems thinkers, however there are limited studies available in the extant literature that investigate how experts' systems thinking skills, if possible at all, can be revealed within Twitter analysis. This study aims to reveal systems thinking levels of experts from their Twitter accounts represented as a network. Unraveling of latent Twitter network clusters ensues the centrality analysis of their follower networks inferred in terms of systems thinking dimensions. COVID-19 emerges as a relevant case study to investigate the relationship between COVID-19 experts' Twitter network and their systems thinking capabilities. A sample of 55 trusted expert Twitter accounts related to COVID-19 has been selected for the current study based on the lists from Forbes, Fortune, and Bustle. The Twitter network has been constructed based on the features extracted from their Twitter accounts. Community detection reveals three distinct groups of experts. In order to relate system thinking qualities to each group, systems thinking dimensions are matched with the follower network characteristics such as node-level metrics and centrality measures including degree, betweenness, closeness and Eigen centrality. Comparison of the 55 expert follower network characteristics elucidates three clusters with significant differences in centrality scores and node-level metrics. The clusters with a higher, medium, lower scores can be classified as Twitter accounts of Holistic thinkers, Middle thinkers, and Reductionist thinkers, respectfully. In conclusion, systems thinking capabilities are traced through unique network patterns in relation to the follower network characteristics associated with systems thinking dimensions.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"12"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9936930/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10794216","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-05-26DOI: 10.1007/s41109-023-00551-w
Eoghan Cunningham, Derek Greene
Role discovery is the task of dividing the set of nodes on a graph into classes of structurally similar roles. Modern strategies for role discovery typically rely on graph embedding techniques, which are capable of recognising complex graph structures when reducing nodes to dense vector representations. However, when working with large, real-world networks, it is difficult to interpret or validate a set of roles identified according to these methods. In this work, motivated by advancements in the field of explainable artificial intelligence, we propose surrogate explanation for role discovery, a new framework for interpreting role assignments on large graphs using small subgraph structures known as graphlets. We demonstrate our framework on a small synthetic graph with prescribed structure, before applying them to a larger real-world network. In the second case, a large, multidisciplinary citation network, we successfully identify a number of important citation patterns or structures which reflect interdisciplinary research.
{"title":"Surrogate explanations for role discovery on graphs.","authors":"Eoghan Cunningham, Derek Greene","doi":"10.1007/s41109-023-00551-w","DOIUrl":"10.1007/s41109-023-00551-w","url":null,"abstract":"<p><p>Role discovery is the task of dividing the set of nodes on a graph into classes of structurally similar roles. Modern strategies for role discovery typically rely on graph embedding techniques, which are capable of recognising complex graph structures when reducing nodes to dense vector representations. However, when working with large, real-world networks, it is difficult to interpret or validate a set of roles identified according to these methods. In this work, motivated by advancements in the field of explainable artificial intelligence, we propose surrogate explanation for role discovery, a new framework for interpreting role assignments on large graphs using small subgraph structures known as graphlets. We demonstrate our framework on a small synthetic graph with prescribed structure, before applying them to a larger real-world network. In the second case, a large, multidisciplinary citation network, we successfully identify a number of important citation patterns or structures which reflect interdisciplinary research.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"28"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10219885/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9900243","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-05-23DOI: 10.1007/s41109-023-00549-4
Mohammad Ali Soltanshahi, Babak Teimourpour, Hadi Zare
Link prediction (LP) has many applications in various fields. Much research has been carried out on the LP field, and one of the most critical problems in LP models is handling one-to-many and many-to-many relationships. To the best of our knowledge, there is no research on discriminative fine-tuning (DFT). DFT means having different learning rates for every parts of the model. We introduce the BuB model, which has two parts: relationship Builder and Relationship Booster. Relationship Builder is responsible for building the relationship, and Relationship Booster is responsible for strengthening the relationship. By writing the ranking function in polar coordinates and using the nth root, our proposed method provides solutions for handling one-to-many and many-to-many relationships and increases the optimal solutions space. We try to increase the importance of the Builder part by controlling the learning rate using the DFT concept. The experimental results show that the proposed method outperforms state-of-the-art methods on benchmark datasets.
{"title":"BuB: a builder-booster model for link prediction on knowledge graphs.","authors":"Mohammad Ali Soltanshahi, Babak Teimourpour, Hadi Zare","doi":"10.1007/s41109-023-00549-4","DOIUrl":"10.1007/s41109-023-00549-4","url":null,"abstract":"<p><p>Link prediction (LP) has many applications in various fields. Much research has been carried out on the LP field, and one of the most critical problems in LP models is handling one-to-many and many-to-many relationships. To the best of our knowledge, there is no research on discriminative fine-tuning (DFT). DFT means having different learning rates for every parts of the model. We introduce the BuB model, which has two parts: relationship Builder and Relationship Booster. Relationship Builder is responsible for building the relationship, and Relationship Booster is responsible for strengthening the relationship. By writing the ranking function in polar coordinates and using the nth root, our proposed method provides solutions for handling one-to-many and many-to-many relationships and increases the optimal solutions space. We try to increase the importance of the Builder part by controlling the learning rate using the DFT concept. The experimental results show that the proposed method outperforms state-of-the-art methods on benchmark datasets.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"27"},"PeriodicalIF":1.3,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10204686/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9545690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-05-05DOI: 10.1007/s41109-023-00547-6
Alberto Cottica, Veronica Davidov, Magdalena Góralska, Jan Kubik, Guy Melançon, Richard Mole, Bruno Pinaud, Wojciech Szymański
The use of data and algorithms in the social sciences allows for exciting progress, but also poses epistemological challenges. Operations that appear innocent and purely technical may profoundly influence final results. Researchers working with data can make their process less arbitrary and more accountable by making theoretically grounded methodological choices. We apply this approach to the problem of simplifying networks representing ethnographic corpora, in the interest of visual interpretation. Network nodes represent ethnographic codes, and their edges the co-occurrence of codes in a corpus. We introduce and discuss four techniques to simplify such networks and facilitate visual analysis. We show how the mathematical characteristics of each one are aligned with an identifiable approach in sociology or anthropology: structuralism and post-structuralism; identifying the central concepts in a discourse; and discovering hegemonic and counter-hegemonic clusters of meaning. We then provide an example of how the four techniques complement each other in ethnographic analysis.
{"title":"Operationalizing anthropological theory: four techniques to simplify networks of co-occurring ethnographic codes.","authors":"Alberto Cottica, Veronica Davidov, Magdalena Góralska, Jan Kubik, Guy Melançon, Richard Mole, Bruno Pinaud, Wojciech Szymański","doi":"10.1007/s41109-023-00547-6","DOIUrl":"10.1007/s41109-023-00547-6","url":null,"abstract":"<p><p>The use of data and algorithms in the social sciences allows for exciting progress, but also poses epistemological challenges. Operations that appear innocent and purely technical may profoundly influence final results. Researchers working with data can make their process less arbitrary and more accountable by making theoretically grounded methodological choices. We apply this approach to the problem of simplifying networks representing ethnographic corpora, in the interest of visual interpretation. Network nodes represent ethnographic codes, and their edges the co-occurrence of codes in a corpus. We introduce and discuss four techniques to simplify such networks and facilitate visual analysis. We show how the mathematical characteristics of each one are aligned with an identifiable approach in sociology or anthropology: structuralism and post-structuralism; identifying the central concepts in a discourse; and discovering hegemonic and counter-hegemonic clusters of meaning. We then provide an example of how the four techniques complement each other in ethnographic analysis.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"22"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10161994/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9857388","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-08-21DOI: 10.1007/s41109-023-00566-3
Gergely Ódor, Jana Vuckovic, Miguel-Angel Sanchez Ndoye, Patrick Thiran
Inferring the source of a diffusion in a large network of agents is a difficult but feasible task, if a few agents act as sensors revealing the time at which they got hit by the diffusion. One of the main limitations of current source identification algorithms is that they assume full knowledge of the contact network, which is rarely the case, especially for epidemics, where the source is called patient zero. Inspired by recent implementations of contact tracing algorithms, we propose a new framework, which we call Source Identification via Contact Tracing Framework (SICTF). In the SICTF, the source identification task starts at the time of the first hospitalization, and initially we have no knowledge about the contact network other than the identity of the first hospitalized agent. We may then explore the network by contact queries, and obtain symptom onset times by test queries in an adaptive way, i.e., both contact and test queries can depend on the outcome of previous queries. We also assume that some of the agents may be asymptomatic, and therefore cannot reveal their symptom onset time. Our goal is to find patient zero with as few contact and test queries as possible. We implement two local search algorithms for the SICTF: the LS algorithm, which has recently been proposed by Waniek et al. in a similar framework, is more data-efficient, but can fail to find the true source if many asymptomatic agents are present, whereas the LS+ algorithm is more robust to asymptomatic agents. By simulations we show that both LS and LS+ outperform previously proposed adaptive and non-adaptive source identification algorithms adapted to the SICTF, even though these baseline algorithms have full access to the contact network. Extending the theory of random exponential trees, we analytically approximate the source identification probability of the LS/ LS+ algorithms, and we show that our analytic results match the simulations. Finally, we benchmark our algorithms on the Data-driven COVID-19 Simulator (DCS) developed by Lorch et al., which is the first time source identification algorithms are tested on such a complex dataset.
{"title":"Source identification via contact tracing in the presence of asymptomatic patients.","authors":"Gergely Ódor, Jana Vuckovic, Miguel-Angel Sanchez Ndoye, Patrick Thiran","doi":"10.1007/s41109-023-00566-3","DOIUrl":"10.1007/s41109-023-00566-3","url":null,"abstract":"<p><p>Inferring the source of a diffusion in a large network of agents is a difficult but feasible task, if a few agents act as sensors revealing the time at which they got hit by the diffusion. One of the main limitations of current source identification algorithms is that they assume full knowledge of the contact network, which is rarely the case, especially for epidemics, where the source is called patient zero. Inspired by recent implementations of contact tracing algorithms, we propose a new framework, which we call Source Identification via Contact Tracing Framework (SICTF). In the SICTF, the source identification task starts at the time of the first hospitalization, and initially we have no knowledge about the contact network other than the identity of the first hospitalized agent. We may then explore the network by contact queries, and obtain symptom onset times by test queries in an adaptive way, i.e., both contact and test queries can depend on the outcome of previous queries. We also assume that some of the agents may be asymptomatic, and therefore cannot reveal their symptom onset time. Our goal is to find patient zero with as few contact and test queries as possible. We implement two local search algorithms for the SICTF: the LS algorithm, which has recently been proposed by Waniek et al. in a similar framework, is more data-efficient, but can fail to find the true source if many asymptomatic agents are present, whereas the LS+ algorithm is more robust to asymptomatic agents. By simulations we show that both LS and LS+ outperform previously proposed adaptive and non-adaptive source identification algorithms adapted to the SICTF, even though these baseline algorithms have full access to the contact network. Extending the theory of random exponential trees, we analytically approximate the source identification probability of the LS/ LS+ algorithms, and we show that our analytic results match the simulations. Finally, we benchmark our algorithms on the Data-driven COVID-19 Simulator (DCS) developed by Lorch et al., which is the first time source identification algorithms are tested on such a complex dataset.</p>","PeriodicalId":37010,"journal":{"name":"Applied Network Science","volume":"8 1","pages":"53"},"PeriodicalIF":2.2,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442312/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10442074","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}