To propose an intelligent, non-invasive, highly precise, and rapid method to predict the mutation status of the Epidermal Growth Factor Receptor (EGFR) to accelerate treatment with Tyrosine Kinase Inhibitor (TKI) for patients with untreated adenocarcinoma Non-Small Cell Lung Cancer.
Real-world data from 521 patients with adenocarcinoma NSCLC who performed a CT scan and underwent surgery or pathological biopsy to determine EGFR gene mutation between January 2021 and July 2022, is collected. Solutions to the problems that prevent the model from achieving very high precision, namely: human errors made during the annotation of the database and the low precision of the output decision of the model, are proposed. Thus, among the 521 analyzed cases, only 40 were selected as patients with EGFR gene mutation and 98 cases with wild-type EGFR.
The proposed model is trained, validated, and tested on 12,040 2D images extracted from the 138 CT scans images where patients were randomly partitioned into training (80 %) and test (20 %) sets. The performance obtained for EGFR gene mutation prediction was 95.22 % for accuracy, 960.2 for F1_score, 95.89 % for precision, 96.92 % for sensitivity, 94.01 % for Cohen kappa, and 98 % for AUC.
An EGFR gene mutation status prediction method, with high-performance thanks to an intelligent prediction model entrained by highly accurate annotated data is proposed. The outcome of this project will facilitate rapid decision-making when applying a TKI as an initial treatment.
This study aims to analyze the quantitative parameters and morphological indices of three-dimensional (3D) visualization to differentiate lepidic predominant adenocarcinoma (LPA) from non-LPA subtypes, which include acinar predominant adenocarcinoma (APA), papillary predominant adenocarcinoma (PPA), micropapillary predominant adenocarcinoma (MPA), and solid predominant adenocarcinoma (SPA).
A group of 178 individuals diagnosed with lung adenocarcinoma were chosen and categorized into two groups: the LPA group and the non-LPA group, according to their pathological results. Quantitative parameters and morphological indexes such as 3D volume, solid proportion, and vascular cluster sign were obtained using 3D visualization and reconstruction techniques.
Significant differences were observed in the vascular cluster sign, spiculation, shape, air bronchogram, bubble-like lucency, margin, pleural indentation, lobulation, maximum tumor diameter, 3D mean CT value, 3D volume, 3D mass, 3D density, and solid proportion between two groups (P<0.05). The optimal cut-off values for diagnosing non-LPA were a 3D mean CT value of −445.45 HU, a 3D density of 0.56 mg·mm−3, and a solid proportion reaching 27.95 %. Multivariate logistic regression analysis revealed that 3D mean CT value, lobulation, and margin characteristics independently predicted stageⅠinvasive lung adenocarcinoma. The combination of three indicators significantly improved prediction accuracy (AUC=0.881).
The utilization of 3D visualization technology in a systematic approach enables the acquisition of 3D quantitative parameters and morphological indicators of thin-slice CT lesions. These efforts significantly contribute to the identification of histopathological subtypes for stageⅠinvasive lung adenocarcinoma. When integrated with pertinent clinical data, this offers essential guidance for developing various surgical techniques and treatment plans.