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Sensitivity and Specificity of Molecular-Based Pathogen Detection Method in Refillable Drinking Water Samples 基于分子检测方法在可重复灌装饮用水样品中的敏感性和特异性
Pub Date : 2023-03-25 DOI: 10.22487/25411969.2022.v11.i02.16217
A. Achyar, I. Putri, D. Putri
The existence of refillable drinking water depots helps the community to get affordable and practical drinking water. However, poor quality drinking water will, however, have an effect on health. One of the quality parameters of drinking water that is suitable for consumption is not contaminated by the bacteria Escherichia coli, Salmonella sp. and Escherichia sp. Measurement of the quality of drinking water, in addition to microbiological tests, can be carried out molecularly using PCR (Polymerase Chain Reaction) method. Therefore, the aim of this study was to examine the sensitivity and specificity of PCR for detection of drinking water pathogens. DNA was extracted from cultures of E. coli, Salmonella sp., Escherichia sp. and some non-coliform bacteria. PCR was performed separately using primer pairs of E. coli-AA-Forward and E.coli-AA-Reverse, Salmonella-OY-Forward and Salmonella-OY-Reverse, E. coli-DB-Forward and E. coli-DB-Reverse. The results of the PCR sensitivity showed that the minimum amount of DNA that can be detected by this method were 0.0025 ng/µL, 0,0005 ng/µL, 0,04 ng/µL for E. coli, Salmonella sp., Escherichia sp., respectively. The results of the PCR specificity of each primer pairs indicated that these methods were able to detect each coliform bacterium specifically according to PCR product size of ± 417 bp, ± 559 bp and ± 815 bp for E. coli, Salmonella sp., Escherichia sp., respectively.
可续水饮水站的存在帮助社区获得负担得起和实用的饮用水。然而,劣质饮用水会对健康产生影响。适于饮用的饮用水质量参数之一是不受大肠杆菌、沙门氏菌、埃希氏菌等细菌污染。饮用水质量的测定,除微生物学检测外,还可采用分子PCR (Polymerase Chain Reaction,聚合酶链反应)法进行。因此,本研究的目的是检验PCR检测饮用水病原体的敏感性和特异性。从大肠杆菌、沙门氏菌、埃希氏菌和一些非大肠菌群细菌培养物中提取DNA。分别用大肠杆菌- aa - forward和大肠杆菌- aa - reverse、沙门氏菌- y - forward和沙门氏菌- y - reverse、大肠杆菌- db - forward和大肠杆菌- db - reverse引物对进行PCR。结果表明,该方法对大肠杆菌、沙门氏菌、埃希氏菌的最低DNA检出量分别为0.0025 ng/µL、0,0005 ng/µL、0,04 ng/µL。各引物对的PCR特异性结果表明,该方法对大肠杆菌、沙门氏菌和埃希氏菌的PCR产物大小分别为±417 bp、±559 bp和±815 bp,均能特异性检测出大肠杆菌。
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引用次数: 0
Antimicrobial activity of moringa leaf infusion on Escherichia coli isolate from Musca domestica L 辣木叶浸液对家蝇大肠杆菌的抑菌活性研究
Pub Date : 2023-03-25 DOI: 10.22487/25411969.2022.v11.i02.16166
The Moringa oleifera can be used as a medium for the prevention and treatment of infectious diseases such as diarrhea. Diarrhea can be caused by Escherichia coli, which house flies can transmit. Moringa oleifera leaves have antimicrobial substances such as flavonoids, triterpenoids, steroids, saponins and tannins. This aim of the study was to determine the minimum inhibitory concentration of M. oleifera infusion on the growth of E. coli. This research is a laboratory experiment with Well Diffusion Agar method and dilution technique. The materials used in the study were M. oleifera leaf infusion with concentrations of 50%, 40%, 30%, 20%, and 10%, while 0% was a negative control (Aquadest). E. coli isolates were obtained from M. domestica. The results showed that the inhibition zone formed at concentrations of 50%, 40%, 30%, 20%, 10%, and 0% was 15.55 mm, 13.80 mm, 13.10 mm, 10.10 mm, and 0 mm, respectively. The minimum inhibitory concentration of leaf infusion against E. coli isolates was 25%, and the minimum bactericidal concentration could not be determined because all concentrations tested showed bacterial growth. Instead, the lowest inhibitory concentration was 25%. In concentrations of 50%, 40%, and 30%, M. oleifera leaf infusion has potent antibacterial action; at concentrations of 20%, it has moderate antimicrobial activity; and at concentrations of 10%, it is unable to inhibit the growth of E. coli. Further research is needed to determine the value of the minimum bactericidal concentration at concentrations above 25%, and it is necessary to test it on other digestive tract pathogenic bacteria.
辣木可以作为预防和治疗腹泻等传染病的培养基。腹泻可由大肠杆菌引起,家蝇可传播大肠杆菌。辣木叶含有抗菌物质,如类黄酮、三萜、类固醇、皂苷和单宁。本研究的目的是确定油芽孢杆菌注射液对大肠杆菌生长的最低抑制浓度。本研究采用扩散琼脂法和稀释法进行室内实验。实验材料为50%、40%、30%、20%、10%浓度的油橄榄叶浸膏,0%为阴性对照(Aquadest)。从家蝇中分离得到大肠杆菌。结果表明:50%、40%、30%、20%、10%和0%浓度下形成的抑菌带分别为15.55 mm、13.80 mm、13.10 mm、10.10 mm和0 mm;叶浸液对大肠杆菌分离株的最低抑菌浓度为25%,由于所有浓度均显示细菌生长,因此无法确定最低杀菌浓度。相反,最低抑制浓度为25%。在浓度为50%、40%和30%时,油桐叶浸液具有较强的抗菌作用;浓度为20%时,具有中等抑菌活性;当浓度为10%时,它无法抑制大肠杆菌的生长。浓度在25%以上时的最低杀菌浓度值需要进一步研究确定,并有必要对其他消化道病原菌进行试验。
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引用次数: 0
Antimicrobial Potential of Catfish (Clarias batrachus) and Snakehead Fish (Chana striata) Mucus on Bacterial Coliform Growth and its Application as the Organic Face Mask and Lipstick 鲶鱼(Clarias batrachus)和黑鱼(Chana striata)黏液对细菌大肠菌群生长的抑菌潜力及其在有机面膜和口红中的应用
Pub Date : 2023-03-25 DOI: 10.22487/25411969.2022.v11.i02.16171
Wenny Pintalitna Tarigan, C. U. Tarigan, Cherline Halim, J. Valerie, Vionita Itanza, Russel Oeintz
Mucus from snakehead fish (Chana striata) and catfish (Clarias batrachus) has the potential to be employed in organic cosmetics and wound healing. The aim of this study is to create antimicrobials from Clarias batrachus and Chana striata mucus that may inhibit the growth of coliform bacteria. It also seeks to establish the minimum inhibitory concentration of Clarias batrachus and Chana striata mucus extracts against the growth of Escherichia coli when cocoa extract is added as an internal ingredient for making face masks and organic lipstick. The content of anthocyanin in cocoa beans used as a natural colouring agent that can replace synthetic dyes. The pooled fish mucus was extracted with succeeding centrifugation and filtration. The acidic mucus extracts were tested for antimicrobial-inhibitory effects and minimum inhibitory concentration (MIC) by agar-overlay diffusion and plate dilution method, respectively. The results showed that all fish mucus extracts exhibited antimicrobial effects against tested pathogens with catfish exhibiting the highest inhibitory effects against the bacteria sample as compared to the broad-spectrum antibiotic control. Interestingly, their mucus revealed inhibitory effects against bacteria at the lowest concentration (1:4 dilution). The present findings revealed the potential antimicrobial use of freshwater fish mucus against medically-important pathogens
黑头鱼(Chana striata)和鲶鱼(Clarias batrachus)的粘液有潜力用于有机化妆品和伤口愈合。本研究旨在从batrachus Clarias和Chana striata的黏液中制备可抑制大肠菌群生长的抗菌剂。它还试图确定当可可提取物作为制造口罩和有机口红的内部成分添加时,batrachus和Chana striata粘液提取物对大肠杆菌生长的最低抑制浓度。可可豆中花青素的含量被用作天然着色剂,可以代替合成染料。混合的鱼黏液经离心和过滤后提取。分别采用琼脂覆盖扩散法和平板稀释法测定酸性黏液提取物的抑菌效果和最低抑菌浓度(MIC)。结果表明,所有鱼黏液提取物均具有抗菌作用,其中鲶鱼对细菌样品的抑制作用最高,与广谱抗生素对照相比。有趣的是,他们的粘液在最低浓度(1:4稀释)下显示出对细菌的抑制作用。目前的研究结果揭示了淡水鱼粘液对医学上重要病原体的潜在抗菌用途
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引用次数: 0
Design of Specific Primer for Methallothionein Gene of Tor Fish (Tor tambra) 托尔鱼甲基硫蛋白基因特异性引物的设计
Pub Date : 2023-03-08 DOI: 10.22487/25411969.2022.v11.i02.16216
Y. Atifah, Afifatul Achyar
The use of heavy metal biomarkers is needed to detect and integrate heavy metals at the molecular level. Metallothionein gene is a gene that is expressed in fish organs that have been heavily polluted. The aim of the study was to find specific primers for methallothionein of tor fish. Detection of the metallothionein gene expression in PCR instruments requires a primer in the form of a short chain DNA sequence as a specific target DNA identifier. The primer design was performed in silico using the NCBI site and multiple-aligned using Geneious Prime bioinformatic software. Primers were designed according to the conserved region of these genes. The primers specificity was checked using Primer BLAST tools in NCBI. The results showed that the forward primer 1 (5'- GAT TGC GCC AAG ACT GGA ACT –3') and reverse primer 1 (5' – ATC ACG TTG ACC TCC TCA CTG -3') qualified as good primers with an amplicon size 186 bp.
重金属生物标志物的使用需要在分子水平上检测和整合重金属。金属硫蛋白基因是在受到严重污染的鱼类器官中表达的基因。本研究的目的是为鱼类甲基硫蛋白寻找特异性引物。在PCR仪器中检测金属硫蛋白基因表达需要一个短链DNA序列形式的引物作为特定的靶DNA标识符。引物设计使用NCBI位点进行计算机设计,并使用genous Prime生物信息学软件进行多重比对。根据这些基因的保守区设计引物。在NCBI中使用Primer BLAST工具检查引物的特异性。结果表明,正向引物1(5′- GAT TGC GCC AAG ACT GGA ACT -3′)和反向引物1(5′- ATC ACG TTG ACC TCC TCA CTG -3′)均为扩增量为186 bp的引物。
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引用次数: 0
The Green chili to reduce formaldehyde in tofu by the spectrophotometric method using Schiff reagent 用希夫试剂分光光度法测定了青椒对豆腐中甲醛的还原作用
Pub Date : 2023-03-08 DOI: 10.22487/25411969.2022.v11.i02.16144
Edy Agustian Yazid, Roihatul Zahroh, Agita Anung Hadiyati
Tofu is a processed soybean food ingredient that is widely consumed by the public. Besides having a high nutritional content, tofu is also relatively cheap and easy to obtain. Tofu has a short shelf life and is easily damaged, so producers often add the preservative formaldehyde, which has been banned for use. Formalin or formaldehyde is not included in the list of food additives because they are toxic and harmful to health. This study was aimed to determine the reduction of formalin levels in white tofu by soaking green chilies. The study was carried out experimentally with the spectrophotometric method using the Schiff reagent. Absorbance measurements were carried out at a maximum wavelength of 580 nm. Parameters observed were the addition of 0% green chili solution concentration 0%; 2.5%; 5.0%; 7.5%; 10%; and 12.5% for 10 minutes of continuous immersion; 20 minutes; and 30 minutes. Based on the results of the study, it was found that each addition of green chili solution concentration reduced the formalin level along with the soaking time. The addition of 12.5% green chili solution for 30 minutes resulted in the greatest decrease in formalin levels, namely 69.82%. Based on these results it was concluded that the addition of green chili solution could reduce formalin in tofu.
豆腐是一种被大众广泛食用的加工过的大豆食品成分。除了营养成分高,豆腐也相对便宜,容易获得。豆腐保质期短,容易损坏,所以生产商经常添加甲醛防腐剂,甲醛已被禁止使用。福尔马林或甲醛因有毒有害健康而未列入食品添加剂清单。本研究旨在确定通过浸泡青椒来降低白豆腐中福尔马林的含量。采用希夫试剂分光光度法进行了实验研究。在最大波长580 nm处进行吸光度测量。观察参数为:添加量0%青辣椒溶液浓度0%;2.5%;5.0%;7.5%;10%;12.5%连续浸泡10分钟;20分钟;30分钟。研究结果表明,随着浸泡时间的延长,不同浓度的青辣椒溶液对福尔马林含量的影响有所降低。加入12.5%的青椒溶液30分钟后,福尔马林含量下降幅度最大,达69.82%。结果表明,加入青椒溶液可以降低豆腐中的福尔马林含量。
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引用次数: 0
Formulation and Physical Evaluation of Sunscreen Cream with Methanol Extract of Euchema cottonii 棉草甲醇提取物防晒霜的配方及物理性能评价
Pub Date : 2022-12-31 DOI: 10.22487/25411969.2022.v11.i02.16180
Devi Wulansari, Aripudin, Susi Ratnaningtyas, Sri Suminar Gopurullah
Seaweed has been widely used as a traditional medicinal ingredient by the community for generations. One species of seaweed, Eucheuma cottonii, is known that contains many antioxidant compounds. The antioxidant in seaweed is mainly in the form of polyphenolic antioxidative compounds, especially flavonoids. Flavonoid and tannin are two compounds that perform as antioxidant activity and have been considered as potential sunscreen ingredients. The test methods used in this study include SPF value determination test, sensitivity test, homogeneity test, pH test, and viscosity test. Sensitivity test was conducted by 20 semi-trained panelists. The data was statistically analyzed using one-way ANOVA SPSS version 21.0.
海藻作为一种传统的药用成分被社会广泛使用了几代人。有一种海藻,真金草,已知含有许多抗氧化化合物。海藻中的抗氧化剂主要以多酚类抗氧化剂的形式存在,尤其是黄酮类化合物。类黄酮和单宁是两种具有抗氧化活性的化合物,被认为是潜在的防晒成分。本研究采用的试验方法包括SPF值测定试验、敏感性试验、均匀性试验、pH值试验和粘度试验。敏感度测试由20名半培训小组成员进行。采用SPSS 21.0版本的单因素方差分析对数据进行统计学分析。
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引用次数: 1
Physical and chemical conditions of waters for seaweed cultivation in Morowali, Central Sulawesi, Indonesia 印度尼西亚苏拉威西岛中部Morowali海藻养殖水域的物理和化学条件
Pub Date : 2022-10-17 DOI: 10.22487/25411969.2022.v11.i01.15860
This study was aimed to examine the physical and chemical conditions of the seaweed growing areas in Morowali Regency. It was carried out in January–August 2019 in 13 sub-districts of Morowali Regency, however the sample was taken from 3 sub-districts, South Bungku District, Witaponda District, and Petasia District, because not all districts have seaweed cultivation locality. Data sampling was done in three observation stations, consisting of several research sub-stations. The result showed that only two of the fourteen criteria—carbon dioxide and nitrate—were found to be unfavorable for seaweed growth at three observation stations.
本研究旨在研究Morowali摄政海藻生长区域的物理和化学条件。该研究于2019年1月至8月在Morowali县的13个街道进行,但样本取自3个街道,即South Bungku区、Witaponda区和Petasia区,因为并非所有地区都有海藻养殖地点。数据采样在三个观测站进行,观测站由几个研究分站组成。结果表明,在14项指标中,只有二氧化碳和硝酸盐对3个观测站的海藻生长不利。
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引用次数: 1
Total phenol content of accessions of Kencur (Kaempferia galanga L.) at different altitudes 不同海拔地区山柰种质总酚含量的变化
Pub Date : 2022-10-17 DOI: 10.22487/25411969.2022.v11.i01.15696
Subaryanti Subaryanti, T. Triadiati, Y. C. Sulistyaningsih, D. I. Pradono
Kencur (Kaempferia galanga L.) is one of the potential medicinal plants with a high enough market demand so that the cultivation of kencur is still quite promising. The purpose of this study was to analyze the effect of altitude on the total phenol content of several accessions of kencur. The research was carried out at the Tropical Biopharmaceutical Laboratory, Bogor Agricultural University, from June to November 2017. The treatment tested was kencur accession rhizome taken from two altitudes, 214 m asl (lowlands) and 780 m asl (highlands). 10 g of kencur accession rhizome powder was added with methanol in a ratio of 1:10, then macerated while shaking using a magnetic stirrer (25 °C; 180 min). The extract was filtered and the filtrate was dried using a rotary vacuum evaporator (50 rpm; 60 °C) until a dry crude extract was obtained. Total phenol was tested by the Folin-Ciocalteu method at a wavelength of 730 nm. The results showed that altitude significantly affected the total phenol content of the kencur accession rhizome extract. The highest total phenol content value was obtained from Galesia 1 (GAL 1) in the lowlands of 17.92 mg/g (equivalent to gallic acid/GAE) and in the highlands obtained from PBG accession (Purbalingga) of 24.85 GAE mg/g compared to other accessions.
高良姜(Kaempferia galanga L.)是一种极具市场潜力的药用植物,其栽培前景十分广阔。本研究的目的是分析海拔对几种参参总酚含量的影响。该研究于2017年6月至11月在茂物农业大学热带生物制药实验室进行。试验用海拔214 m(低地)和780 m(高地)的根茎进行处理。取根茎粉10g,按1:10的比例加入甲醇,磁力搅拌器(25℃;180分钟)。提取液经过过滤,滤液用旋转真空蒸发器(50 rpm;60°C),直到得到干燥的粗提物。用Folin-Ciocalteu法测定总酚含量,波长为730 nm。结果表明,海拔对根茎提取物中总酚含量有显著影响。低海拔地区Galesia 1 (GAL 1)的总酚含量最高,为17.92 mg/g(相当于没食子酸/GAE),高原地区PBG (Purbalingga)的总酚含量最高,为24.85 GAE mg/g。
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引用次数: 0
Antiinflammation activity of Muntingia calabura L. leaves ethanol, ethylacetate and chloroform extracts 山楂叶乙醇、乙酸乙酯和氯仿提取物的抗炎活性
Pub Date : 2022-10-17 DOI: 10.22487/25411969.2022.v11.i01.15699
Nova Rahma Widyaningrum, Sri Saptuti Wahyuningsih, Cipto Priyono
Muntingia calabura L. leaves extract are reported rich in flavonoidal compounds which shows a potential activity such as antidiabetic, antipyretic, analgesic and anti-inflammatory. Several subgroups of flavonoid compounds include flavones, flavanones, flavans and biflavans. This study aimed to analyze the anti-inflammatory activity of ethanolic, ethylacetate, and chloroform extracts of M. calabura L. leaves. The extraction process was carried out by maceration, where the yield of the three solvents were 19.14%; 8.41% and 6.59% w/w, respectively. The anti-inflammatory activity was carried out by observing a decrease in edema due to 1% carrageenan induction after 4 hours. The statistical results of anti-inflammatory activity showed that the ethanol extract had a significant difference with the positive control of p value < 0.05 in which a dose of 240 mg showed a decrease in edema volume (IEV) that was closed to the positive control (acetosal = 52.12%) which was 62.51% compared to the dose 60 mg and 120 mg. Furthermore, the % IEV of ethyl acetate extract of M. calabura L. leaves at a dose of 60, 120, and 240 mg were 36.30%, 26.83%, 24.24%, respectively. These results demonstrated that an average level of anti-inflammatory activity was 22.89%, and was closed to the dose of 500 mg/kg of acetosal-induced mice. Finally, the chloroform extract with the dose of 60 mg, 120 mg, 240 mg had a significant value of p < 0.05 with a positive control (acetosal). It could be concluded that the ethanol, ethylacetate and chloroform extracts of M. calabura L. leaves may have anti-inflammatory potential with acetosal as a comparison.
据报道,绿野蒙花叶提取物中含有丰富的黄酮类化合物,具有抗糖尿病、解热、镇痛和抗炎等潜在活性。类黄酮化合物的几个亚群包括黄酮、黄烷酮、黄烷和双黄烷。摘要本研究旨在分析柠条叶乙醇、乙酸乙酯和氯仿提取物的抗炎活性。采用浸渍法提取,三种溶剂的提取率为19.14%;w/w分别为8.41%和6.59%。通过观察1%角叉菜胶诱导4小时后水肿的减少来观察抗炎活性。抗炎活性的统计结果显示,乙醇提取物与阳性对照有显著性差异(p值< 0.05),其中240 mg剂量的水肿体积(IEV)下降接近阳性对照(乙酰糖量= 52.12%),与60 mg和120 mg剂量相比下降了62.51%。在60、120和240 mg剂量下,柠条叶乙酸乙酯提取物的IEV分别为36.30%、26.83%和24.24%。结果表明,抗炎活性平均水平为22.89%,接近于500 mg/kg乙醛诱导小鼠的剂量。最后,60mg、120mg、240mg氯仿提取物在阳性对照(乙糖醇)下p < 0.05。结果表明,与乙酸乙酯相比,柠条叶乙醇、乙酸乙酯和氯仿提取物具有较强的抗炎作用。
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引用次数: 0
The effectivity of hand antiseptic against Staphylococcus aureus 手部消毒液对金黄色葡萄球菌的有效性
Pub Date : 2022-10-17 DOI: 10.22487/25411969.2022.v11.i01.15853
G. M. Nurdin, Nur Hidayah, Naura Nazifa R. Hidayat, Erpi Nurdin
This study aimed to determine the hand antiseptic products effectivity against the growth of Staphylococcus aureus bacteria. The sample used were hand antiseptic products purchased from several minimarkets, markets, and obtained from several institutions in West Sulawesi by using purposive sampling technique. Samples were evaluated using the well diffusion method with three replications. Since the study data did not meet the ANOVA test requirements, the Kruskal-Wallis analysis test was used to analyse the data, then was continued with the Mann Whitney test. The results showed the sig. value of 0.00 < 0.05 which means, there was a significant difference between hand antiseptics in inhibiting the growth of Staphylococcus aureus bacteria. The results showed that only 2 out of 10 hand antiseptic products with codes N8 and N10 were effective in inhibiting the growth of Staphylococcus aureus bacteria. This can be seen from the formation of a clear zone around the hand antiseptic.
本研究旨在测定手消毒液对金黄色葡萄球菌生长的抑制作用。使用的样本是从几个小市场和市场购买的手消毒液产品,并通过有目的取样技术从西苏拉威西的几个机构获得。样品采用孔扩散法进行评价,重复3次。由于研究数据不符合方差分析检验要求,因此采用Kruskal-Wallis分析检验对数据进行分析,然后继续使用Mann Whitney检验。结果显示,符号值为0.00 < 0.05,说明两种手部消毒液在抑制金黄色葡萄球菌生长方面存在显著差异。结果表明,编码为N8和N10的10种手部消毒液中,仅有2种能有效抑制金黄色葡萄球菌的生长。这可以从手部消毒液周围形成一个清晰的区域看出。
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引用次数: 0
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Natural Science: Journal of Science and Technology
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