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Disentangling the evolution of electrons and holes in photoexcited ZnO nanoparticles. 解开光激发ZnO纳米颗粒中电子和空穴的演化。
IF 2.3 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2023-11-03 eCollection Date: 2023-11-01 DOI: 10.1063/4.0000204
Christopher J Milne, Natalia Nagornova, Thomas Pope, Hui-Yuan Chen, Thomas Rossi, Jakub Szlachetko, Wojciech Gawelda, Alexander Britz, Tim B van Driel, Leonardo Sala, Simon Ebner, Tetsuo Katayama, Stephen H Southworth, Gilles Doumy, Anne Marie March, C Stefan Lehmann, Melanie Mucke, Denys Iablonskyi, Yoshiaki Kumagai, Gregor Knopp, Koji Motomura, Tadashi Togashi, Shigeki Owada, Makina Yabashi, Martin M Nielsen, Marek Pajek, Kiyoshi Ueda, Rafael Abela, Thomas J Penfold, Majed Chergui

The evolution of charge carriers in photoexcited room temperature ZnO nanoparticles in solution is investigated using ultrafast ultraviolet photoluminescence spectroscopy, ultrafast Zn K-edge absorption spectroscopy, and ab initio molecular dynamics (MD) simulations. The photoluminescence is excited at 4.66 eV, well above the band edge, and shows that electron cooling in the conduction band and exciton formation occur in <500 fs, in excellent agreement with theoretical predictions. The x-ray absorption measurements, obtained upon excitation close to the band edge at 3.49 eV, are sensitive to the migration and trapping of holes. They reveal that the 2 ps transient largely reproduces the previously reported transient obtained at 100 ps time delay in synchrotron studies. In addition, the x-ray absorption signal is found to rise in ∼1.4 ps, which we attribute to the diffusion of holes through the lattice prior to their trapping at singly charged oxygen vacancies. Indeed, the MD simulations show that impulsive trapping of holes induces an ultrafast expansion of the cage of Zn atoms in <200 fs, followed by an oscillatory response at a frequency of ∼100 cm-1, which corresponds to a phonon mode of the system involving the Zn sub-lattice.

利用超快紫外光致发光光谱、超快Zn K边吸收光谱和从头算分子动力学(MD)模拟研究了溶液中光激发室温ZnO纳米颗粒中电荷载流子的演化。光致发光在4.66激发 eV,远高于带边缘,并表明导带中的电子冷却和激子形成发生在-1中,这对应于涉及Zn亚晶格的系统的声子模式。
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引用次数: 0
Non-thermal structural transformation of diamond driven by x-rays. x射线驱动下金刚石的非热结构转变。
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2023-10-27 eCollection Date: 2023-09-01 DOI: 10.1063/4.0000193
Philip Heimann, Nicholas J Hartley, Ichiro Inoue, Victor Tkachenko, Andre Antoine, Fabien Dorchies, Roger Falcone, Jérôme Gaudin, Hauke Höppner, Yuichi Inubushi, Konrad J Kapcia, Hae Ja Lee, Vladimir Lipp, Paloma Martinez, Nikita Medvedev, Franz Tavella, Sven Toleikis, Makina Yabashi, Toshinori Yabuuchi, Jumpei Yamada, Beata Ziaja

Intense x-ray pulses can cause the non-thermal structural transformation of diamond. At the SACLA XFEL facility, pump x-ray pulses triggered this phase transition, and probe x-ray pulses produced diffraction patterns. Time delays were observed from 0 to 250 fs, and the x-ray dose varied from 0.9 to 8.0 eV/atom. The intensity of the (111), (220), and (311) diffraction peaks decreased with time, indicating a disordering of the crystal lattice. From a Debye-Waller analysis, the rms atomic displacements perpendicular to the (111) planes were observed to be significantly larger than those perpendicular to the (220) or (311) planes. At a long time delay of 33 ms, graphite (002) diffraction indicates that graphitization did occur above a threshold dose of 1.2 eV/atom. These experimental results are in qualitative agreement with XTANT+ simulations using a hybrid model based on density-functional tight-binding molecular dynamics.

强x射线脉冲可以引起金刚石的非热结构转变。在SACLA XFEL设施中,泵浦x射线脉冲触发了这种相变,探针x射线脉冲产生衍射图案。从0到250 fs观察到时间延迟,x射线剂量从0.9到8.0不等 eV/原子。(111)、(220)和(311)衍射峰的强度随着时间的推移而降低,表明晶格无序。根据Debye Waller分析,观察到垂直于(111)平面的均方根原子位移显著大于垂直于(220)或(311)平面的原子位移。在33的长时间延迟 ms,石墨(002)衍射表明石墨化确实发生在1.2的阈值剂量以上 eV/原子。这些实验结果与使用基于密度泛函紧密结合分子动力学的混合模型的XTANT+模拟在质量上一致。
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引用次数: 0
Solution phase high repetition rate laser pump x-ray probe picosecond hard x-ray spectroscopy at the Stanford Synchrotron Radiation Lightsource. 斯坦福同步辐射光源的溶液相高重复率激光泵浦x射线探针皮秒硬x射线光谱。
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2023-10-27 eCollection Date: 2023-09-01 DOI: 10.1063/4.0000207
Marco Reinhard, Dean Skoien, Jacob A Spies, Angel T Garcia-Esparza, Benjamin D Matson, Jeff Corbett, Kai Tian, James Safranek, Eduardo Granados, Matthew Strader, Kelly J Gaffney, Roberto Alonso-Mori, Thomas Kroll, Dimosthenis Sokaras

We present a dedicated end-station for solution phase high repetition rate (MHz) picosecond hard x-ray spectroscopy at beamline 15-2 of the Stanford Synchrotron Radiation Lightsource. A high-power ultrafast ytterbium-doped fiber laser is used to photoexcite the samples at a repetition rate of 640 kHz, while the data acquisition operates at the 1.28 MHz repetition rate of the storage ring recording data in an alternating on-off mode. The time-resolved x-ray measurements are enabled via gating the x-ray detectors with the 20 mA/70 ps camshaft bunch of SPEAR3, a mode available during the routine operations of the Stanford Synchrotron Radiation Lightsource. As a benchmark study, aiming to demonstrate the advantageous capabilities of this end-station, we have conducted picosecond Fe K-edge x-ray absorption spectroscopy on aqueous [FeII(phen)3]2+, a prototypical spin crossover complex that undergoes light-induced excited spin state trapping forming an electronic excited state with a 0.6-0.7 ns lifetime. In addition, we report transient Fe Kβ main line and valence-to-core x-ray emission spectra, showing a unique detection sensitivity and an excellent agreement with model spectra and density functional theory calculations, respectively. Notably, the achieved signal-to-noise ratio, the overall performance, and the routine availability of the developed end-station have enabled a systematic time-resolved science program using the monochromatic beam at the Stanford Synchrotron Radiation Lightsource.

我们在斯坦福同步辐射光源的光束线15-2上提出了一个用于溶液相高重复率(MHz)皮秒硬x射线光谱的专用终端站。用高功率超快掺镱光纤激光器以640的重复频率对样品进行了光激发 kHz,而数据采集工作在1.28 以交替开关模式记录数据的存储环的MHz重复率。时间分辨x射线测量是通过20 SPEAR3的mA/70ps凸轮轴束,这是斯坦福同步加速器辐射光源常规操作期间可用的模式。作为一项基准研究,旨在证明该终端站的优势能力,我们在水性[FeII(phen)3]2+上进行了皮秒Fe K边x射线吸收光谱,这是一种典型的自旋交叉复合物,经过光诱导的激发自旋态捕获,形成0.6-0.7的电子激发态 ns寿命。此外,我们报道了瞬态Fe Kβ主线和价核x射线发射光谱,分别显示出独特的探测灵敏度和与模型光谱和密度泛函理论计算的良好一致性。值得注意的是,所实现的信噪比、整体性能和所开发的终端站的常规可用性使斯坦福同步辐射光源能够使用单色光束进行系统的时间分辨科学计划。
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引用次数: 0
Tailored nanophononic wavefield in a patterned bilayer system probed by ultrafast convergent beam electron diffraction 用超快会聚束电子衍射探测双层系统中的定制纳米声子波场
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2022-05-01 DOI: 10.1063/4.0000144
N. Bach, A. Feist, M. Möller, C. Ropers, S. Schäfer
Optically excited nanostructures provide a versatile platform for the generation of confined nanophononic fields with potential (non-)linear interactions between different degrees of freedom. Control of resonance frequencies and the selective excitation of acoustic modes still remains challenging due to the interplay of nanoscale geometries and interfacial coupling mechanisms. Here, we demonstrate that a semiconductor membrane patterned with a platinum stripe acts as a tailored source for high-frequency strain waves generating a multi-modal distortion wave propagating through the membrane. To locally monitor the ultrafast structural dynamics at a specific distance from the deposited metal stripe, we employ ultrafast convergent beam electron diffraction in a laser-pump/electron-probe scheme. Experimentally observed acoustic deformations are reproduced by numerical simulations in a continuous medium model, revealing a spatiotemporal evolution of the lattice dynamics dominated by local rotations with minor strain and shear contributions.
光激发纳米结构为产生具有不同自由度之间的潜在(非线性)相互作用的受限纳米声子场提供了一个通用平台。由于纳米级几何结构和界面耦合机制的相互作用,共振频率的控制和声模式的选择性激发仍然具有挑战性。在这里,我们证明了具有铂条纹图案的半导体膜作为高频应变波的定制源,产生通过膜传播的多模态畸变波。为了在与沉积金属条一定距离处局部监测超快结构动力学,我们采用激光泵浦/电子探针方案中的超快会聚束电子衍射。在连续介质模型中,通过数值模拟再现了实验观察到的声学变形,揭示了晶格动力学的时空演化,该演化由局部旋转主导,应变和剪切贡献较小。
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引用次数: 1
Temperature measurements of liquid flat jets in vacuum 真空中液体平面射流的温度测量
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2021-12-10 DOI: 10.1063/4.0000139
Yi-Ping Chang, Z. Yin, T. Balciunas, H. Wörner, J. Wolf
Sub-μm thin samples are essential for spectroscopic purposes. The development of flat micro-jets enabled novel spectroscopic and scattering methods for investigating molecular systems in the liquid phase. However, the temperature of these ultra-thin liquid sheets in vacuum has not been systematically investigated. Here, we present a comprehensive temperature characterization using optical Raman spectroscopy of sub-micron flatjets produced by two different methods: colliding of two cylindrical jets and a cylindrical jet compressed by a high pressure gas. Our results reveal the dependence of the cooling rate on the material properties and the source characteristics, i.e., nozzle-orifice size, flow rate, and pressure. We show that materials with higher vapor pressures exhibit faster cooling rates, which is illustrated by comparing the temperature profiles of water and ethanol flatjets. In a sub-μm liquid sheet, the temperature of the water sample reaches around 268 K and the ethanol around 253 K close to the flatjet's terminus.
亚μm薄的样品对于光谱学的目的是必不可少的。扁平微射流的发展为研究液相分子系统提供了新的光谱和散射方法。然而,这些超薄液体片在真空中的温度还没有系统的研究。在这里,我们利用光学拉曼光谱对两种不同方法产生的亚微米平面射流进行了全面的温度表征:两个圆柱形射流碰撞和一个圆柱形射流被高压气体压缩。我们的研究结果揭示了冷却速率与材料性能和源特性(即喷嘴孔尺寸、流量和压力)的关系。通过比较水和乙醇平板射流的温度分布,我们发现具有较高蒸汽压的材料表现出更快的冷却速度。在亚μm液片中,水样温度达到268 K左右,乙醇温度达到253 K左右。
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引用次数: 7
Free Vibration of Single Degree of Freedom System 单自由度系统的自由振动
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2021-01-01 DOI: 10.1007/978-3-030-69674-0_2
M. Mukhopadhyay
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引用次数: 0
Ultrafast coherent exciton dynamics in size-controlled perylene bisimide aggregates 尺寸控制的苝-双酰亚胺聚集体中的超快相干激子动力学
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2019-11-01 DOI: 10.1063/1.5124148
Seongsoo Kang, Christina Kaufmann, Yongseok Hong, Woojae Kim, Agnieszka Nowak‐Król, F. Würthner, Dongho Kim
For H-aggregates of perylene bisimide (PBI), it has been reported that upon photoexcitation, an initially delocalized Frenkel exciton is localized by excimer formation. However, in recent studies, the beforehand exciton dynamics preceding the excimer formation was suggested in larger aggregates consisting of at least more than 10-PBI subunits, which was not observed in small aggregates comprising less than four-PBI subunits. This feature implies that the size of molecular aggregates plays a crucial role in the initial exciton dynamics. In this regard, we have tried to unveil the initial exciton dynamics in PBI H-aggregates by tracking down the transient reorientations of electronic transition dipoles formed by interactions between the PBI subunits in systematically size-controlled PBI H-aggregates. The ultrafast coherent exciton dynamics depending on the molecular aggregate sizes can be distinguished using polarization-dependent femtosecond-transient absorption anisotropy spectroscopic measurements with a time resolution of ∼40 fs. The ultrafast decay profiles of the anisotropy values are unaffected by vibrational relaxation and rotational diffusion processes; hence, the coherent exciton dynamics of the PBI H-aggregates prior to the excimer formation can be directly revealed as the energy migration processes along the PBI H-aggregates.
对于苝双酰亚胺(PBI)的H-聚集体,据报道,在光激发时,最初离域的Frenkel激子通过准分子形成而被局部化。然而,在最近的研究中,在由至少超过10-PBI亚基组成的较大聚集体中提出了准分子形成之前的预先激子动力学,而在包括少于四个PBI亚单位的小聚集体中没有观察到这一点。这一特征意味着分子聚集体的大小在初始激子动力学中起着至关重要的作用。在这方面,我们试图通过追踪系统尺寸控制的PBI H-聚集体中PBI亚基之间的相互作用形成的电子跃迁偶极子的瞬态重定向来揭示PBI H-聚集体中的初始激子动力学。取决于分子聚集体大小的超快相干激子动力学可以使用时间分辨率为~40fs的偏振相关飞秒瞬态吸收各向异性光谱测量来区分。各向异性值的超快衰减曲线不受振动弛豫和旋转扩散过程的影响;因此,在准分子形成之前,PBI H-聚集体的相干激子动力学可以直接揭示为沿着PBI H-聚集体的能量迁移过程。
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引用次数: 8
Decelerated lattice excitation and absence of bulk phonon modes at surfaces: Ultra-fast electron diffraction from Bi(111) surface upon fs-laser excitation 减速晶格激发和表面不存在体声子模式:fs激光激发下Bi(111)表面的超快电子衍射
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2019-11-01 DOI: 10.1063/1.5128275
V. Tinnemann, C. Streubühr, B. Hafke, T. Witte, A. Kalus, A. Hanisch-Blicharski, M. Ligges, P. Zhou, D. von der Linde, U. Bovensiepen, M. Horn-von Hoegen
Ultrafast reflection high-energy electron diffraction is employed to follow the lattice excitation of a Bi(111) surface upon irradiation with a femtosecond laser pulse. The thermal motion of the atoms is analyzed through the Debye–Waller effect. While the Bi bulk is heated on time scales of 2 to 4 ps, we observe that the excitation of vibrational motion of the surface atoms occurs much slower with a time constant of 12 ps. This transient nonequilibrium situation is attributed to the weak coupling between bulk and surface phonon modes which hampers the energy flow between the two subsystems. From the absence of a fast component in the transient diffraction intensity, it is in addition concluded that truncated bulk phonon modes are absent at the surface.
采用超快反射高能电子衍射法研究了飞秒激光脉冲辐照下Bi(111)表面的晶格激发。通过德拜-沃勒效应分析了原子的热运动。当铋体在2 ~ 4 ps的时间尺度上加热时,我们观察到表面原子的振动运动的激发速度要慢得多,时间常数为12 ps。这种瞬态非平衡情况归因于体和表面声子模式之间的弱耦合,阻碍了两个子系统之间的能量流动。此外,从瞬态衍射强度中缺少快速分量的结果可以得出在表面不存在截短的体声子模式的结论。
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引用次数: 2
Fragment screening for a protein-protein interaction inhibitor to WDR5 WDR5蛋白相互作用抑制剂的片段筛选
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2019-11-01 DOI: 10.1063/1.5122849
M. Dennis, B. J. Morrow, O. Dolezal, A. Cuzzupe, Alexandra E Stupple, J. Newman, J. Bentley, M. Hattarki, S. Nuttall, R. Foitzik, I. Street, P. Stupple, B. Monahan, T. Peat
The WD40-repeat protein WDR5 scaffolds various epigenetic writers and is a critical component of the mammalian SET/MLL histone methyltransferase complex. Dysregulation of the MLL1 catalytic function is associated with mixed-lineage leukemia, and antagonism of the WDR5-MLL1 interaction by small molecules has been proposed as a therapeutic strategy for MLL-rearranged cancers. Small molecule binders of the “WIN” site of WDR5 that cause displacement from chromatin have been additionally implicated to be of broader use in cancer treatment. In this study, a fragment screen with Surface Plasmon Resonance (SPR) was used to identify a highly ligand-efficient imidazole-containing compound that is bound in the WIN site. The subsequent medicinal chemistry campaign—guided by a suite of high-resolution cocrystal structures with WDR5—progressed the initial hit to a low micromolar binder. One outcome from this study is a moiety that substitutes well for the side chain of arginine; a tripeptide containing one such substitution was resolved in a high resolution structure (1.5 Å) with a binding mode analogous to the native tripeptide. SPR furthermore indicates a similar residence time (kd = ∼0.06 s−1) for these two analogs. This novel scaffold therefore represents a possible means to overcome the potential permeability issues of WDR5 ligands that possess highly basic groups like guanidine. The series reported here furthers the understanding of the WDR5 WIN site and functions as a starting point for the development of more potent WDR5 inhibitors that may serve as cancer therapeutics.
WD40-repeat蛋白WDR5是多种表观遗传写子的支架,是哺乳动物SET/MLL组蛋白甲基转移酶复合物的关键组成部分。MLL1催化功能的失调与混合谱系白血病有关,小分子拮抗WDR5-MLL1相互作用已被提出作为mll重排癌症的治疗策略。WDR5“WIN”位点的小分子结合物引起染色质位移,在癌症治疗中也有更广泛的应用。在这项研究中,利用表面等离子体共振(SPR)片段筛选技术鉴定了一种结合在WIN位点的高效配体咪唑化合物。随后的药物化学运动-由一套具有wdr5的高分辨率共晶结构指导-将最初的打击进展为低微摩尔粘合剂。这项研究的一个结果是一个片段可以很好地替代精氨酸的侧链;含有这样一个取代的三肽在高分辨率结构(1.5 Å)中被分解,其结合模式类似于天然三肽。SPR进一步表明这两种类似物的停留时间相似(kd = ~ 0.06 s−1)。因此,这种新型支架代表了一种可能的方法,可以克服具有高碱性基团(如胍)的WDR5配体的潜在渗透性问题。这里报道的系列研究进一步加深了对WDR5 WIN位点的理解,并作为开发更有效的WDR5抑制剂的起点,这些抑制剂可能作为癌症治疗药物。
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引用次数: 5
The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years 大分子晶体学再现性的综合资源:前四年的经验
IF 2.8 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL Pub Date : 2019-11-01 DOI: 10.1063/1.5128672
M. Grabowski, M. Cymborowski, P. Porebski, T. Osinski, I. Shabalin, D. Cooper, W. Minor
It has been increasingly recognized that preservation and public accessibility of primary experimental data are cornerstones necessary for the reproducibility of empirical sciences. In the field of molecular crystallography, many journals now recommend that authors of manuscripts presenting a new crystal structure should deposit their primary experimental data (X-ray diffraction images) to one of the dedicated resources created in recent years. Here, we describe our experiences developing the Integrated Resource for Reproducibility in Molecular Crystallography (IRRMC) and describe several examples of a crucial role that diffraction data can play in improving previously determined protein structures. In its first four years, several hundred crystallographers have deposited data from over 5200 diffraction experiments performed at over 60 different synchrotron beamlines or home sources all over the world. In addition to improving the resource and curating submitted data, we have been building a pipeline for extraction or, in some cases, reconstruction of the metadata necessary for seamless automated processing. Preliminary analysis indicates that about 95% of the archived data can be automatically reprocessed. A high rate of reprocessing success shows the feasibility of using the automated metadata extraction and automated processing as a validation step for the deposition of raw diffraction images. The IRRMC is guided by the Findable, Accessible, Interoperable, and Reusable data management principles.
人们越来越认识到,原始实验数据的保存和公众获取是经验科学再现性所必需的基石。在分子晶体学领域,许多期刊现在建议,呈现新晶体结构的手稿的作者应该将他们的主要实验数据(X射线衍射图像)保存到近年来创建的专用资源中。在这里,我们描述了我们开发分子晶体学再现性综合资源(IRRMC)的经验,并描述了衍射数据在改善先前确定的蛋白质结构方面可以发挥关键作用的几个例子。在最初的四年里,数百名晶体学工作者已经保存了来自世界各地60多个不同同步加速器束线或家庭源进行的5200多个衍射实验的数据。除了改进资源和管理提交的数据外,我们还一直在构建一个管道,用于提取或在某些情况下重建无缝自动化处理所需的元数据。初步分析表明,大约95%的存档数据可以自动重新处理。高的再处理成功率表明了使用自动元数据提取和自动处理作为沉积原始衍射图像的验证步骤的可行性。IRRMC遵循可查找、可访问、可互操作和可重复使用的数据管理原则。
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引用次数: 21
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