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Covariate-dependent spatio-temporal covariance models 随变量变化的时空协方差模型
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-08-10 DOI: 10.1016/j.spasta.2024.100853
Yen-Shiu Chin , Nan-Jung Hsu , Hsin-Cheng Huang

Geostatistical regression models are widely used in environmental and geophysical sciences to characterize the mean and dependence structures for spatio-temporal data. Traditionally, these models account for covariates solely in the mean structure, neglecting their potential impact on the spatio-temporal covariance structure. This paper addresses a significant gap in the literature by proposing a novel covariate-dependent covariance model within the spatio-temporal random-effects model framework. Our approach integrates covariates into the covariance function through a Cholesky-type decomposition, ensuring compliance with the positive-definite condition. We employ maximum likelihood for parameter estimation, complemented by an efficient expectation conditional maximization algorithm. Simulation studies demonstrate the superior performance of our method compared to conventional techniques that ignore covariates in spatial covariances. We further apply our model to a PM2.5 dataset from Taiwan, highlighting wind speed’s pivotal role in influencing the spatio-temporal covariance structure. Additionally, we incorporate wind speed and sunshine duration into the covariance function for analyzing Taiwan ozone data, revealing a more intricate relationship between covariance and these meteorological variables.

地质统计回归模型广泛应用于环境和地球物理科学领域,用于描述时空数据的均值结构和依赖结构。传统上,这些模型只考虑均值结构中的协变量,而忽略了它们对时空协方差结构的潜在影响。本文在时空随机效应模型框架内提出了一种新的协变量依赖协方差模型,填补了文献中的一个重要空白。我们的方法通过 Cholesky 型分解将协变量整合到协方差函数中,确保符合正有限条件。我们采用最大似然法进行参数估计,并辅以高效的期望条件最大化算法。模拟研究表明,与忽略空间协方差的传统技术相比,我们的方法具有更优越的性能。我们进一步将模型应用于台湾的 PM2.5 数据集,突出了风速在影响时空协方差结构中的关键作用。此外,我们在分析台湾臭氧数据时将风速和日照时间纳入协方差函数,揭示了协方差与这些气象变量之间更为复杂的关系。
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引用次数: 0
Spatio-temporal ecological models via physics-informed neural networks for studying chronic wasting disease 通过物理信息神经网络建立时空生态模型,用于研究慢性消耗性疾病
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-08-01 DOI: 10.1016/j.spasta.2024.100850
Juan Francisco Mandujano Reyes , Ting Fung Ma , Ian P. McGahan , Daniel J. Storm , Daniel P. Walsh , Jun Zhu

To mitigate the negative effects of emerging wildlife diseases in biodiversity and public health it is critical to accurately forecast pathogen dissemination while incorporating relevant spatio-temporal covariates. Forecasting spatio-temporal processes can often be improved by incorporating scientific knowledge about the dynamics of the process using physical models. Ecological diffusion equations are often used to model epidemiological processes of wildlife diseases where environmental factors play a role in disease spread. Physics-informed neural networks (PINNs) are deep learning algorithms that constrain neural network predictions based on physical laws and therefore are powerful forecasting models useful even in cases of limited and imperfect training data. In this paper, we develop a novel ecological modeling tool using PINNs, which fits a feedforward neural network and simultaneously performs parameter identification in a partial differential equation (PDE) with varying coefficients. We demonstrate the applicability of our model by comparing it with the commonly used Bayesian stochastic partial differential equation method and traditional machine learning approaches, showing that our proposed model exhibits superior prediction and forecasting performance when modeling chronic wasting disease in deer in Wisconsin. Furthermore, our model provides the opportunity to obtain scientific insights into spatio-temporal covariates affecting spread and growth of diseases. This work contributes to future machine learning and statistical methodology development by studying spatio-temporal processes enhanced by prior physical knowledge.

要减轻新出现的野生动物疾病对生物多样性和公共卫生的负面影响,关键是要准确预测病原体的传播,同时纳入相关的时空协变量。利用物理模型,结合有关动态过程的科学知识,通常可以改善时空过程的预测。生态扩散方程常用于模拟野生动物疾病的流行过程,因为环境因素在疾病传播中起着重要作用。物理信息神经网络(PINNs)是一种深度学习算法,可根据物理规律约束神经网络预测,因此是一种强大的预测模型,即使在训练数据有限且不完善的情况下也很有用。在本文中,我们利用 PINNs 开发了一种新型生态建模工具,该工具在拟合前馈神经网络的同时,还对具有变化系数的偏微分方程(PDE)进行参数识别。通过与常用的贝叶斯随机偏微分方程法和传统的机器学习方法进行比较,我们证明了这一模型的适用性,并表明我们提出的模型在对威斯康星州鹿慢性消耗性疾病进行建模时表现出了卓越的预测和预报性能。此外,我们的模型还提供了一个机会,使我们能够从科学角度深入了解影响疾病传播和生长的时空协变量。这项工作通过研究由先验物理知识增强的时空过程,为未来机器学习和统计方法的发展做出了贡献。
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引用次数: 0
Flexible basis representations for modeling large non-Gaussian spatial data 为大型非高斯空间数据建模的灵活基础表示法
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-08-01 DOI: 10.1016/j.spasta.2024.100841
Remy MacDonald, Benjamin Seiyon Lee

Nonstationary and non-Gaussian spatial data are common in various fields, including ecology (e.g., counts of animal species), epidemiology (e.g., disease incidence counts in susceptible regions), and environmental science (e.g., remotely-sensed satellite imagery). Due to modern data collection methods, the size of these datasets have grown considerably. Spatial generalized linear mixed models (SGLMMs) are a flexible class of models used to model nonstationary and non-Gaussian datasets. Despite their utility, SGLMMs can be computationally prohibitive for even moderately large datasets (e.g., 5000 to 100,000 observed locations). To circumvent this issue, past studies have embedded nested radial basis functions into the SGLMM. However, two crucial specifications (knot placement and bandwidth parameters), which directly affect model performance, are typically fixed prior to model-fitting. We propose a novel approach to model large nonstationary and non-Gaussian spatial datasets using adaptive radial basis functions. Our approach: (1) partitions the spatial domain into subregions; (2) employs reversible-jump Markov chain Monte Carlo (RJMCMC) to infer the number and location of the knots within each partition; and (3) models the latent spatial surface using partition-varying and adaptive basis functions. Through an extensive simulation study, we show that our approach provides more accurate predictions than competing methods while preserving computational efficiency. We demonstrate our approach on two environmental datasets - incidences of plant species and counts of bird species in the United States.

非平稳和非高斯空间数据常见于各个领域,包括生态学(如动物物种计数)、流行病学(如易感地区的疾病发病率计数)和环境科学(如遥感卫星图像)。由于采用了现代数据收集方法,这些数据集的规模已大幅扩大。空间广义线性混合模型(SGLMM)是一类灵活的模型,用于对非平稳和非高斯数据集进行建模。尽管空间广义线性混合模型非常有用,但对于中等规模的数据集(如 5000 到 100000 个观测地点)来说,其计算量也可能过大。为了规避这一问题,过去的研究将嵌套径向基函数嵌入到 SGLMM 中。然而,直接影响模型性能的两个关键参数(节点位置和带宽参数)在模型拟合之前通常是固定不变的。我们提出了一种使用自适应径向基函数对大型非平稳和非高斯空间数据集进行建模的新方法。我们的方法:(1) 将空间域划分为子区域;(2) 采用可逆跳转马尔可夫链蒙特卡罗(RJMCMC)来推断每个分区内节点的数量和位置;(3) 使用分区变化和自适应基函数对潜在空间表面进行建模。通过广泛的模拟研究,我们证明了我们的方法在保持计算效率的同时,比其他竞争方法提供了更准确的预测。我们在两个环境数据集--美国植物物种发生率和鸟类物种计数--上演示了我们的方法。
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引用次数: 0
Neural likelihood surfaces for spatial processes with computationally intensive or intractable likelihoods 具有计算密集型或棘手似然的空间过程的神经似然曲面
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-08-01 DOI: 10.1016/j.spasta.2024.100848
Julia Walchessen , Amanda Lenzi , Mikael Kuusela

In spatial statistics, fast and accurate parameter estimation, coupled with a reliable means of uncertainty quantification, can be challenging when fitting a spatial process to real-world data because the likelihood function might be slow to evaluate or wholly intractable. In this work, we propose using convolutional neural networks to learn the likelihood function of a spatial process. Through a specifically designed classification task, our neural network implicitly learns the likelihood function, even in situations where the exact likelihood is not explicitly available. Once trained on the classification task, our neural network is calibrated using Platt scaling which improves the accuracy of the neural likelihood surfaces. To demonstrate our approach, we compare neural likelihood surfaces and the resulting maximum likelihood estimates and approximate confidence regions with the equivalent for exact or approximate likelihood for two different spatial processes—a Gaussian process and a Brown–Resnick process which have computationally intensive and intractable likelihoods, respectively. We conclude that our method provides fast and accurate parameter estimation with a reliable method of uncertainty quantification in situations where standard methods are either undesirably slow or inaccurate. The method is applicable to any spatial process on a grid from which fast simulations are available.

在空间统计学中,将空间过程拟合到现实世界的数据时,快速准确的参数估计加上可靠的不确定性量化方法可能会面临挑战,因为似然函数的评估可能会很慢,或者完全难以解决。在这项工作中,我们建议使用卷积神经网络来学习空间过程的似然函数。通过专门设计的分类任务,我们的神经网络可以隐式学习似然函数,即使在无法明确获得确切似然的情况下也是如此。在对分类任务进行训练后,我们的神经网络将使用普拉特缩放进行校准,从而提高神经似然曲面的准确性。为了证明我们的方法,我们比较了神经似然曲面和由此产生的最大似然估计值和近似置信区域,以及两种不同空间过程的精确或近似似然的等效值--高斯过程和布朗-雷斯尼克过程,这两种过程分别具有计算密集型似然和难以处理的似然。我们的结论是,我们的方法提供了快速、准确的参数估计,在标准方法过于缓慢或不准确的情况下,提供了可靠的不确定性量化方法。该方法适用于网格上的任何空间过程,并可对其进行快速模拟。
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引用次数: 0
Spatiotemporal factor models for functional data with application to population map forecast 功能数据时空因素模型在人口分布图预测中的应用
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-08-01 DOI: 10.1016/j.spasta.2024.100849
Tomoya Wakayama , Shonosuke Sugasawa

The proliferation of mobile devices has led to the collection of large amounts of population data. This situation has prompted the need to utilize this rich, multidimensional data in practical applications. In response to this trend, we have integrated functional data analysis (FDA) and factor analysis to address the challenge of predicting hourly population changes across various districts in Tokyo. Specifically, by assuming a Gaussian process, we avoided the large covariance matrix parameters of the multivariate normal distribution. In addition, the data were both time and spatially dependent between districts. To capture various characteristics, a Bayesian factor model was introduced, which modeled the time series of a small number of common factors and expressed the spatial structure through factor loading matrices. Furthermore, the factor loading matrices were made identifiable and sparse to ensure the interpretability of the model. We also proposed a Bayesian shrinkage method as a systematic approach for factor selection. Through numerical experiments and data analysis, we investigated the predictive accuracy and interpretability of our proposed method. We concluded that the flexibility of the method allows for the incorporation of additional time series features, thereby improving its accuracy.

移动设备的普及导致了大量人口数据的收集。这种情况促使人们需要在实际应用中利用这些丰富的多维数据。针对这一趋势,我们整合了功能数据分析(FDA)和因子分析,以应对预测东京各区每小时人口变化的挑战。具体来说,通过假设高斯过程,我们避免了多元正态分布的大协方差矩阵参数。此外,各区之间的数据既与时间有关,也与空间有关。为了捕捉各种特征,我们引入了贝叶斯因子模型,该模型将时间序列建模为少数几个共同因子,并通过因子载荷矩阵表达空间结构。此外,为确保模型的可解释性,我们还使因子载荷矩阵具有可识别性和稀疏性。我们还提出了一种贝叶斯收缩法,作为因子选择的系统方法。通过数值实验和数据分析,我们研究了所提方法的预测准确性和可解释性。我们得出的结论是,该方法的灵活性允许纳入更多的时间序列特征,从而提高了其准确性。
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引用次数: 0
Enhancing bivariate spatial association analysis of network-constrained geographical flows: An incremental scale-based method 加强受网络限制的地理流动的双变量空间关联分析:基于规模的增量方法
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-07-31 DOI: 10.1016/j.spasta.2024.100852
Wenkai Liu , Haonan Cai , Weijie Zhang , Sheng Hu , Zhangzhi Tan , Jiannan Cai , Hanfa Xing

Measuring bivariate spatial association plays a key role in understanding the spatial relationships between two types of geographical flow (hereafter referred to as “flow”). However, existing studies usually use multiple scales to analyze bivariate associations of flows, leading to the results at larger scales can be strongly affected by the results at smaller scales. Moreover, the planar space assumption of most existing studies is unsuitable for network-constrained flows. To solve these problems, a network incremental flow cross K-function (NIFK) is developed in this study by extending the cross K-function for points into a flow context. Specifically, two versions of NIFK were developed in this study: the global version to check whether bivariate associations exist in the whole study area and the local version to identify specific locations where associations occur. Experiments on three simulated datasets demonstrate the advantages of the proposed method over an available alternative method. A case study conducted using Xiamen taxi and ride-hailing service datasets demonstrates the usefulness of the proposed method. The detected bivariate spatial association provides deep insights for understanding the competition between taxi services and ride-hailing services.

测量双变量空间关联对于理解两类地理流量(以下简称 "流量")之间的空间关系起着关键作用。然而,现有研究通常使用多个尺度来分析流量的双变量关联,导致较大尺度的结果会受到较小尺度结果的强烈影响。此外,大多数现有研究的平面空间假设并不适合网络约束流。为了解决这些问题,本研究通过将点的交叉 K 函数扩展到流的背景下,开发了网络增量流交叉 K 函数(NIFK)。具体来说,本研究开发了两个版本的 NIFK:全局版本用于检查整个研究区域是否存在二元关联,局部版本用于识别发生关联的特定位置。在三个模拟数据集上进行的实验表明,与现有的替代方法相比,本研究提出的方法更具优势。利用厦门出租车和打车服务数据集进行的案例研究证明了所提方法的实用性。检测到的二元空间关联为理解出租车服务和打车服务之间的竞争提供了深刻的见解。
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引用次数: 0
Analysis of the spatial distribution and future trends of coal mine accidents: A case study of coal mine accidents in China from 2005–2022 煤矿事故的空间分布和未来趋势分析:2005-2022 年中国煤矿事故案例研究
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-07-30 DOI: 10.1016/j.spasta.2024.100851
He Yinnan , Qin Ruxiang

A scientific grasp of the macro law of coal mining accidents can contribute to strengthening their prevention and control and guaranteeing a stable energy supply. In this study, 2,269 investigation reports of China's coal mining accidents from 2005 to 2022 were adopted as the basic data source, and GIS spatial analysis and rescaled range analysis methods were utilized to comprehensively reveal the spatial-temporal distribution features, and evolutionary patterns of coal mining accidents in China. The findings indicate that the numbers of gas explosion, permeability, outburst, suffocation and roof fall accidents has rapidly declined. The coverage area of coal mining accidents has gradually moved toward western of China. However, the center of the area covered by coal mining accidents during the study period was mainly concentrated in Shanxi and Henan Provinces. Besides, the number of deaths resulting from coal mining accidents across the country has gradually decreased, while the time series exhibited high continuity, with future changes consistent with past changes. The average cycle period of the coal mining accident sequence was 5 years. Through the systematic analysis of coal mine accidents conducted in this research, the law of accident occurrence was more comprehensively revealed, providing a reference and basis for the government and enterprises to implement precise preventive measures.

科学把握煤矿事故发生的宏观规律,有助于加强煤矿事故防控,保障能源稳定供应。本研究以2005-2022年中国煤矿事故调查报告2269份为基础数据,利用GIS空间分析和重标度范围分析方法,全面揭示了中国煤矿事故的时空分布特征和演变规律。研究结果表明,瓦斯爆炸、透水、突水、窒息和顶板冒落事故数量迅速下降,煤矿事故覆盖区域不断扩大,事故发生率逐年上升。煤矿事故的覆盖区域逐渐向西部转移。然而,研究期间煤矿事故覆盖区域的中心主要集中在山西省和河南省。此外,全国煤矿事故死亡人数逐渐减少,时间序列表现出较强的连续性,未来的变化与过去的变化相一致。煤矿事故序列的平均周期为 5 年。通过对煤矿事故的系统分析,较为全面地揭示了事故发生的规律,为政府和企业实施精准预防措施提供了参考和依据。
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引用次数: 0
The SPDE approach for spatio-temporal datasets with advection and diffusion 针对具有平流和扩散的时空数据集的 SPDE 方法
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-07-02 DOI: 10.1016/j.spasta.2024.100847
Lucia Clarotto , Denis Allard , Thomas Romary , Nicolas Desassis

In the task of predicting spatio-temporal fields in environmental science using statistical methods, introducing statistical models inspired by the physics of the underlying phenomena that are numerically efficient is of growing interest. Large space–time datasets call for new numerical methods to efficiently process them. The Stochastic Partial Differential Equation (SPDE) approach has proven to be effective for the estimation and the prediction in a spatial context. We present here the advection–diffusion SPDE with first–order derivative in time which defines a large class of nonseparable spatio-temporal models. A Gaussian Markov random field approximation of the solution to the SPDE is built by discretizing the temporal derivative with a finite difference method (implicit Euler) and by solving the spatial SPDE with a finite element method (continuous Galerkin) at each time step. The “Streamline Diffusion” stabilization technique is introduced when the advection term dominates the diffusion. Computationally efficient methods are proposed to estimate the parameters of the SPDE and to predict the spatio-temporal field by kriging, as well as to perform conditional simulations. The approach is applied to a solar radiation dataset. Its advantages and limitations are discussed.

在利用统计方法预测环境科学中的时空场时,引入受基本现象物理学启发的高效数值统计模型越来越受到关注。大型时空数据集需要新的数值方法来高效处理。事实证明,随机偏微分方程(SPDE)方法对空间范围内的估计和预测非常有效。我们在此介绍具有一阶时间导数的平流-扩散 SPDE,它定义了一大类不可分割的时空模型。通过使用有限差分法(隐式欧拉)对时间导数进行离散化,并在每个时间步使用有限元法(连续 Galerkin)求解空间 SPDE,建立了 SPDE 解的高斯马尔可夫随机场近似。当平流项主导扩散时,引入 "流线扩散 "稳定技术。提出了计算效率高的方法来估计 SPDE 的参数,通过克里格法预测时空场,以及进行条件模拟。该方法应用于太阳辐射数据集。讨论了该方法的优势和局限性。
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引用次数: 0
Spatial non-stationarity test of regression relationships in the multiscale geographically weighted regression model 多尺度地理加权回归模型中回归关系的空间非平稳性检验
IF 2.1 2区 数学 Q1 Mathematics Pub Date : 2024-06-13 DOI: 10.1016/j.spasta.2024.100846
Feng Chen , Yee Leung , Qiang Wang , Yu Zhou

By allowing covariate-specific bandwidths for estimating spatially varying coefficients, the multiscale geographically weighted regression (MGWR) model can simultaneously explore spatial non-stationarity and multiple operational scales of the corresponding geographical processes. Treating the constant coefficients as an extreme situation which corresponds to the global scale and infinite covariate bandwidth, the traditional linear regression, GWR and mixed GWR models are special cases of the MGWR model. An appropriately-specified GWR-based model would be beneficial to the understanding of the general underlying processes, especially for their operational scales. To specify an appropriate model, the key issue is to determine how many MGWR coefficient(s) should be constant. Along the traditional statistical line of thought, we propose a residual-based bootstrap method to test spatial non-stationarity of the MGWR coefficients, which can underpin our understanding of the characteristics of regression relationships in statistics. The simulation experiment validates the proposed test, and demonstrates that it is of valid Type I error and satisfactory power, and is robust to different types of model error distributions. The applicability of the proposed test is demonstrated in a real-world case study on the Shanghai housing prices.

多尺度地理加权回归(MGWR)模型通过允许特定协变量带宽来估计空间变化系数,可以同时探索相应地理过程的空间非平稳性和多种操作尺度。将常数系数视为对应于全球尺度和无限协变量带宽的极端情况,传统的线性回归、GWR 和混合 GWR 模型都是 MGWR 模型的特例。一个基于 GWR 的适当指定模型将有助于理解一般的基本过程,特别是其运行尺度。要指定一个合适的模型,关键问题是确定有多少 MGWR 系数应该是常数。按照传统的统计思路,我们提出了一种基于残差的引导方法来检验 MGWR 系数的空间非平稳性,这可以巩固我们对统计学中回归关系特征的理解。模拟实验验证了所提出的检验方法,证明其具有有效的 I 类误差和令人满意的功率,并对不同类型的模型误差分布具有稳健性。通过对上海房价的实际案例研究,证明了所提检验的适用性。
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引用次数: 0
Analytical simulation methodology for nonlinear spatiotemporal models: Spatial salience in Covid-19 contagion 非线性时空模型的分析模拟方法:Covid-19 传染的空间显著性
IF 2.1 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2024-06-13 DOI: 10.1016/j.spasta.2024.100844
Michael Beenstock , Yoel Cohen , Daniel Felsenstein

‘Outdegree’ from directed graph theory is used to measure the salience of individual locations in the transmission of Covid-19 morbidity through the spatiotemporal network of contagion and their salience in the spatiotemporal diffusion of vaccination rollout. A spatial econometric model in which morbidity varies inversely with vaccination rollout, and vaccination rollout varies directly with morbidity is used to calculate dynamic auto-outdegrees for morbidity and dynamic cross-outdegrees for the effect of vaccination on morbidity. The former identifies hot spots of contagion, and the latter identifies locations in which vaccination rollout is particularly effective in reducing national morbidity. These outdegrees are calculated analytically rather than simulated numerically.

有向图理论中的 "出度 "用于衡量个别地点在通过传染病时空网络传播 Covid-19 发病率时的显著性,以及它们在疫苗接种推广的时空扩散中的显著性。在一个空间计量经济学模型中,发病率与疫苗接种推广情况成反比变化,而疫苗接种推广情况与发病率直接变化,该模型用于计算发病率的动态自动淘汰度和疫苗接种对发病率影响的动态交叉淘汰度。前者确定传染热点,后者确定疫苗接种推广对降低全国发病率特别有效的地点。这些跨度是通过分析而不是数字模拟计算出来的。
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引用次数: 0
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Spatial Statistics
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