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Plant neighbours, not consumers, drive intraspecific phytochemical changes of two grassland species in a field experiment. 在田间试验中,植物邻居而非消费者驱动了两种草地物种种内植物化学变化。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-12-15 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf071
Joshua I Brian, Adrien Le Guennec, Elizabeth T Borer, Eric W Seabloom, Michael A Chadwick, Jane A Catford

Plants use chemicals to respond to their environments. Despite the impact of competition on plant productivity, few studies consider how plant-plant competition affects phytochemistry; most phytochemistry studies focus on plant-consumer interactions. It therefore remains unclear how plants chemically respond to changes in both competition and consumer pressure. We used 1H-NMR spectroscopy to characterize the phytochemistry (both primary and secondary metabolites) of a C4 grass (Andropogon gerardi) and a legume (Lespedeza capitata) in a field experiment. Both species were grown with intraspecific or interspecific neighbours (monoculture or 16-species polyculture) with or without a combined fungicide + insecticide treatment (consumers reduced vs. consumers present) in a factorial design. We measured species aboveground biomass, healthy plant cover (NDVI) and phytochemistry in the four treatments to determine whether plants alter their biomass, phytochemistry, or both in response to neighbours and herbivory. Phytochemistry of A. gerardi did not vary with neighbour identity or consumers, in contrast to A. gerardi biomass, which was higher under interspecific competition and when consumers were reduced. Phytochemistry of L. capitata was also unrelated to consumer reduction, though L. capitata had higher NDVI under reduced consumers. However, L. capitata had lower biomass and exhibited phytochemical signs of metabolic stress (lower sugars and higher amino acid production) when grown with interspecific neighbours. Theory and empirical work have focused on coevolution with consumers as driving phytochemical variation, but our results suggest that-at community scales-the competitive environment may be more important than consumer pressure in determining short-term phytochemical responses of some species.

植物利用化学物质对环境做出反应。尽管竞争对植物生产力有影响,但很少有研究考虑植物间竞争如何影响植物化学;大多数植物化学研究集中在植物与消费者的相互作用上。因此,植物如何对竞争和消费者压力的变化做出化学反应仍不清楚。利用核磁共振(1H-NMR)技术对一种C4禾草(Andropogon gerardi)和一种豆科植物(lepedeza capitata)的植物化学(初级和次级代谢物)进行了田间研究。在析因设计中,这两个物种与种内或种间邻居(单一栽培或16种混合栽培)一起生长,有或没有杀菌剂+杀虫剂联合处理(消费者减少vs消费者存在)。我们测量了四种处理下的物种地上生物量、健康植物覆盖度(NDVI)和植物化学,以确定植物是否改变了它们的生物量、植物化学,或者两者都改变了,以响应邻居和草食。与种间竞争和消费者减少时的生物量相比,热刺的植物化学成分不随邻居身份和消费者的不同而变化。草头草的植物化学特征与消费者减少无关,但消费者减少时草头草的NDVI较高。然而,当与种间邻居生长时,L. capitata的生物量较低,并表现出代谢应激的植物化学迹象(低糖和高氨基酸产量)。理论和实证工作都集中在与消费者共同进化驱动植物化学变化,但我们的研究结果表明,在群落尺度上,竞争环境可能比消费者压力在决定某些物种的短期植物化学反应方面更重要。
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引用次数: 0
Xylem vessel anatomy and hydraulic function scale in concert along the tip-to-base axis of an angiosperm tree. 木质部导管解剖和水力功能尺度沿被子植物树的尖端到基部轴一致。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-12-10 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf072
Swetlana Kreinert, Lucian Kaack, Luciano Pereira, Marcela T Miranda, Stefan Mäck, Jonas Schuler, Steven Jansen

Vessel scaling from tip to base in angiosperms has largely been studied based on vessel diameter. Here, we test if vessel anatomy and transport efficiency in a Fagus sylvatica L. sapling show axial scaling by maintaining a largely proportional ratio of lumen to end-wall resistivity to sap flow with tree height. Vessel diameter (D) of more than 50 000 vessels was measured based on wood sections, while mean vessel length (LV ) was measured semi-automatically with a Pneumatron for 58 stem segments. Based on tip-to-base variation in D and LV , we estimated vessel lumen conductivity (KH ) at the individual vessel level. We also estimated end-wall conductivity (KW ) based on Darcy's law, integrating pit membrane thickness (T PM) with scaling of D and total inter-vessel pit membrane area (AP ) across the sapling. Axial variation in KW was evaluated against end-wall pressure difference ( Δ P ). In addition to a tip-to-base increase in D, we found an increase in LV and AP , illustrating basipetal vessel lengthening. These patterns were associated with proportional changes in KW and KH , which followed a 1:1 relationship with distance to the tip, each contributing to ∼ 50% of the whole-tree conductivity/resistivity. Our findings suggest that vessel dimensions and hydraulic functionality show axial scaling in angiosperm trees, suggesting that anatomy corresponds to the adjustment of hydraulic functionality with plant height. Proportional adjustment of KW and KH highlights the key role of vessel dimensions and inter-vessel pits in regulating transport efficiency and safety, potentially maintaining constant resistance per unit leaf area with height growth.

被子植物的导管从尖端到基部的鳞片化在很大程度上是基于导管直径来研究的。在这里,我们通过保持管腔和端壁电阻率与树高成正比的树液流率,测试了Fagus sylvatica L.树苗的血管解剖和运输效率是否表现出轴向缩放。基于木段测量了5万多个血管的直径(D),而使用Pneumatron半自动测量了58个茎段的平均血管长度(LV)。根据D和LV的尖端到碱基的变化,我们估计了单个血管水平的血管管腔电导率(KH)。我们还根据达西定律估算了端壁电导率(KW),将坑膜厚度(T PM)与树苗的尺度D和总血管间坑膜面积(AP)相结合。根据端壁压差评估KW的轴向变化(Δ P)。除了尖端到基底的D增加外,我们还发现LV和AP增加,说明基底血管延长。这些模式与KW和KH的比例变化有关,它们与到尖端的距离呈1:1的关系,每个模式贡献了整个树的电导率/电阻率的约50%。我们的研究结果表明,被子植物树的血管尺寸和水力功能表现出轴向缩放,这表明解剖结构对应于植物高度对水力功能的调节。KW和KH的比例调整突出了容器尺寸和容器间坑在调节运输效率和安全方面的关键作用,可能随着高度的增长保持单位叶面积的恒定阻力。
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引用次数: 0
Plants clonal strategies are well associated with aridity gradients: insights from Lamiaceae family in the SW and Central Asia. 植物克隆策略与干旱梯度密切相关:来自西南和中亚狭叶科植物的见解。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-12-08 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf069
Chonour Mahmoudi, Jalil Noroozi, Massoud Ranjbar, Matěj Man, Sina Khalvati, Jitka Klimešová, Tomáš Herben

Clonal reproduction is often considered advantageous in stressful environments. While considerable research has explored how clonality supports plant survival in wet and cold conditions, its role in arid and semi-arid conditions remains underexplored. To address this gap, this study examines the distribution and diversity of clonality as a key component of belowground growth form (BGF) along aridity gradients across SW and Central Asia using the species-rich Lamiaceae family as a model. Data were collected from 281 species with a variety of BGFs occurring in a broad range of habitats. Data on BGFs were collected primarily in the field, with additional data from herbarium records and digital databases. BGFs were categorized into hypogeogenous rhizomes, epigeogenous rhizomes, stolons, and non-clonal types. Species distribution data were obtained from regional floras and the Global Biodiversity Information Facility (GBIF) and analysed using precipitation-related bioclimatic variables. Clonal species of the Lamiaceae family, particularly those with hypogeogenous and epigeogenous rhizomes, were more prevalent in extreme environments, both water-limited and moisture-rich, highlighting their adaptation to stressful conditions. They thrived in arid habitats like deserts and semi-deserts as well as wet habitats such as forests or wetlands. Non-clonal species were concentrated in the centre of the gradient, dominating montane steppe shrublands where water availability was moderate and seasonally variable. Clonal plants are not avoiding arid environment. This is particularly noteworthy for species with hypogeogenous rhizomes that have been shown to prefer wet conditions in temperate regions. The exact mechanisms that permit their specialization to wet or dry conditions is to be further studied experimentally. These findings highlight how climate change may differentially affect species based on their BGFs.

无性繁殖通常被认为在压力环境中是有利的。虽然大量研究已经探索了克隆如何支持植物在潮湿和寒冷条件下的生存,但其在干旱和半干旱条件下的作用仍未得到充分探索。为了解决这一差距,本研究以物种丰富的Lamiaceae家族为模型,研究了作为地下生长形式(BGF)关键组成部分的无性系在西南和中亚沿干旱梯度的分布和多样性。收集了281个物种的数据,这些物种在广泛的栖息地中发生了各种BGFs。关于野生生物多样性的数据主要是在野外收集的,其他数据来自植物标本室记录和数字数据库。bgf分为下生根茎型、外生根茎型、匍匐茎型和非克隆型。物种分布数据来源于区域植物区系和全球生物多样性信息设施(GBIF),并利用降水相关的生物气候变量进行分析。蓝科无性系物种,特别是具有下生和外生根状茎的无性系物种,在极端的水限和富湿环境中更为普遍,突出了它们对应激条件的适应能力。它们在干旱的栖息地如沙漠和半沙漠以及潮湿的栖息地如森林或湿地中茁壮成长。非无性系物种集中在梯度中心,主要分布在山地草原灌丛地,水分有效度中等,季节性变化较大。无性系植物不回避干旱环境。这对于具有低级根状茎的物种尤其值得注意,这些物种已被证明更喜欢温带地区的潮湿条件。使它们能够在潮湿或干燥的条件下特化的确切机制有待于进一步的实验研究。这些发现强调了气候变化如何根据物种的BGFs对它们产生不同的影响。
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引用次数: 0
Evolution of floral traits and mating systems under drought: a range-wide study of Mimulus cardinalis. 干旱条件下花性状和交配系统的进化:一项大范围的研究。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-11-28 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf062
Olivia Wilborn-Pilotte, Emily Cook, Katelin Kutella, Seema Nayan Sheth, Jeff Diez

Climate change is intensifying droughts across the globe, challenging species to adapt to novel conditions. While plant physiological and phenological responses to drought are well-documented, less is known about how water scarcity affects the evolution of selfing across species ranges. According to the selfing syndrome hypothesis, in environments where selfing confers a fitness advantage, selection should favour floral traits associated with increased selfing relative to outcrossing. We used a field experiment near the northern range edge of the scarlet monkeyflower (Mimulus cardinalis) to test this hypothesis both spatially (among leading-edge, central, and trailing-edge populations), and temporally (between cohorts separated by a period of historic drought). Although populations from different range positions showed genetic differentiation in some floral traits, these differences did not consistently support predictions of the selfing syndrome hypothesis. Contrary to the predictions of reduced investment in floral rewards and increased selfing ability at range edges, the sugar content of nectar was greater and autogamous seed set was smaller in leading-edge than central populations, herkogamy tended to be greater in trailing-edge populations relative to leading-edge and central ones, and nectar volume did not vary predictably among regions. There was no support for the evolution of selfing syndrome from the predrought ancestors to the postdrought descendants. Instead, in leading-edge populations, descendants evolved greater sugar content relative to ancestors, and there were no other differences between ancestors and descendants in any other trait or region. Overall, these findings suggest that mating system evolution in M. cardinalis likely reflects a complex interplay of regional factors including range position, historical adaptation, and local environmental variability, rather than simple stress-induced shifts towards selfing.

气候变化正在加剧全球的干旱,给物种适应新环境带来挑战。虽然植物对干旱的生理和物候反应有充分的文献记载,但对水资源短缺如何影响物种范围内的自交进化知之甚少。根据自交综合症假说,在自交具有适应性优势的环境中,相对于异交,选择应该倾向于与自交增加相关的花性状。我们在红猴花(Mimulus cardinalis)北部边缘附近进行了实地实验,从空间上(在前沿种群、中心种群和尾缘种群之间)和时间上(在因历史干旱时期分开的队列之间)验证了这一假设。尽管来自不同范围位置的群体在某些花性状上表现出遗传差异,但这些差异并不一致地支持自交综合征假说的预测。与花回报投入减少、自交能力增强的预测相反,前缘种群的花蜜含糖量高于中心种群,自交结实率低于中心种群,尾缘种群的异交性高于前缘和中心种群,花蜜量在区域间没有可预测的变化。没有证据支持自交综合征从干旱前祖先进化到干旱后后代。相反,在优势种群中,后代进化出了比祖先更高的糖含量,并且在任何其他特征或区域中,祖先和后代之间没有其他差异。总的来说,这些发现表明,红毛雀交配系统的进化可能反映了区域因素的复杂相互作用,包括范围位置、历史适应和当地环境变化,而不是简单的压力诱导的向自交的转变。
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引用次数: 0
Evaluation of Echinochloa frumentacea under saline-alkaline conditions and its comparison with five forage species. 盐碱化条件下瘤胃紫衣的评价及其与5种牧草的比较。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-11-20 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf066
Xueqin Wang, Qingxia Zhang, Fengxia Li, Qiaoli Ma, Bo Zhang, Fengju Zhang

Salinity is one of the most devastating abiotic stresses limiting crop productivity. Here, the salinity tolerance level and physiological changes in Echinochloa frumentacea in saline and alkaline soils were estimated by studying root morphology, quantifying ions (Ca2+, K+, Na+, Ca2+/Na+, and K+/Na+) in roots, and measuring antioxidant enzyme activities, malondialdehyde (MDA), proline, and soluble sugar contents. Echinochloa frumentacea was tested against four neutral and alkaline salts, NaCl: Na2SO4:NaHCO3:Na2CO3 in different proportions at 60, 120, 180, 240, and 300 mmol L-1 concentrations. Echinochloa frumentacea was evaluated and compared with plant species, which are commonly cultivated in non-saline and alkaline soils i.e. Echinochola crusgalli, Avena sativa, Salicornia europaea, Medicago sativa, and Glycyrrhiza uralensis. The results revealed an increase in root length, diameter, absorption area, fresh, and dry weight at 120 mmol L-1. However, a gradual decrease in these parameters was observed at higher salt concentrations. In contrast, an increase in superoxide dismutase (SOD), peroxidase (POD), catalase (CAT) activities, and MDA and proline levels were observed with increasing salt concentration. The roots of E. frumentacea absorbed higher levels of ions than the other five forage plant species. Higher K+/Na+ and strong root structure in E. frumentacea indicate its better tolerance in saline soil than in alkaline soil. Our results demonstrate that E. frumentacea can tolerate up to 120 mmol L-1 salt in a saline-alkaline environment and is more suitable for growth in saline soil. In addition, the root system of E. frumentacea can be used to dechlorinate the chloride from soil and reduce its toxic effect on plants. It can also be used as a target species for selection and breeding programs to improve salt tolerance in future studies.

盐度是限制作物产量的最具破坏性的非生物胁迫之一。本文通过根系形态研究、根系离子(Ca2+、K+、Na+、Ca2+/Na+和K+/Na+)定量测定、抗氧化酶活性、丙二醛(MDA)、脯氨酸和可溶性糖含量测定等方法,对盐碱地和碱性土壤中瘤状棘球藻的耐盐水平和生理变化进行了研究。以60、120、180、240、300 mmol L-1浓度的NaCl: Na2SO4:NaHCO3:Na2CO3 4种不同比例的中性盐和碱性盐为试验材料,对紫锥藻进行了抗碱性试验。以非盐碱地和碱性土壤中常种植的紫锥藻(Echinochola crusgalli)、Avena sativa、Salicornia europaea、紫花苜蓿(Medicago sativa)和甘草(glycyrhiza uralensis)为对照,对紫锥藻进行了评价和比较。结果表明,在120 mmol L-1处理下,根长、直径、吸收面积、鲜重和干重均有所增加。然而,在较高的盐浓度下,这些参数逐渐降低。相反,随着盐浓度的增加,超氧化物歧化酶(SOD)、过氧化物酶(POD)、过氧化氢酶(CAT)活性以及丙二醛(MDA)和脯氨酸(proline)水平均升高。瘤胃根对离子的吸收水平高于其他5种饲料植物。瘤胃在盐渍土中具有较高的K+/Na+和较强的根系结构,对盐渍土的耐受性优于碱性土。结果表明,在盐碱地环境下,瘤锥菊可耐受高达120 mmol L-1的盐,更适合在盐碱地中生长。此外,瘤锥菊的根系还可以使土壤中的氯离子脱氯,减少其对植物的毒性作用。在未来的研究中,它也可以作为选择和育种计划的目标物种,以提高耐盐性。
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引用次数: 0
Neighbour sensing through rhizodeposits in sorghum affects plant physiology and productivity. 高粱根系沉积物的邻居感应影响植物生理和生产力。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-11-13 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf065
Shiran Ben-Zeev, Amanda Penn, Erica H Lawrence-Paul, Desa Rae Abrams, Rotem Ben-Zeev, Carolyn Lowry, Jesse R Lasky

Plant-plant interactions play a crucial role in shaping the growth environment for crops, impacting their productivity and resilience to stress. Interactions between plants have been incorporated into breeding programmes by selecting new target traits that will advance plants' abilities to produce in high densities. The study of plant-plant interactions belowground promises new pathways and traits for crop improvement. This study focuses on the developmental and physiological responses of sorghum (Sorghum bicolor L.) genotypes to neighbouring sorghum plants. In this study, we used two growing methods: (i) a focal plant surrounded by neighbouring plants in the same pot but without shading, and (ii) a focal plant grown either alone or surrounded by neighbours, irrigated with nutrient solution that was passed through pots (leachates) with or without plants. Our results show that the presence of neighbours in the same pot led to reduced dry weight, plant height, and leaf area of the focal plant. In addition, the presence of neighbours reduced stomatal conductance and photosystem II quantum yield. While the response direction was similar across tested genotypes, the magnitude varied. The results were repeated when neighbouring plants were not grown in the same pot, but a nutrient solution was passed through the root systems of other plants into a separate pot containing another plant. Furthermore, we saw a reduction in assimilation rate and stomatal conductance when plants were exposed to either the physical presence of neighbours or leachate. We did not find differences in root architecture in either treatment. These results show that plants change their growth in response to neighbours and that the signal is carried through the liquid phase of the soil. Our findings provide insights into sorghum plants' responses to belowground signalling from neighbouring plants and lay the foundation for future studies enabling increased crop performance under high-density planting conditions.

植物与植物之间的相互作用在塑造作物生长环境、影响其生产力和抗逆性方面起着至关重要的作用。通过选择新的目标性状,植物之间的相互作用已被纳入育种计划,这些性状将提高植物高密度生产的能力。地下植物-植物相互作用的研究为作物改良提供了新的途径和特性。本研究主要研究了高粱(sorghum bicolor L.)基因型对邻近高粱植株的发育和生理反应。在这项研究中,我们使用了两种生长方法:(i)焦点植物被邻近植物包围,但没有遮阳;(ii)焦点植物单独生长或被邻居包围,用营养液灌溉,营养液通过有或没有植物的花盆(渗滤液)。我们的研究结果表明,在同一盆中邻居的存在导致焦点植物的干重、株高和叶面积减少。此外,邻居的存在降低了气孔导度和光系统II的量子产率。虽然不同测试基因型的反应方向相似,但程度不同。当邻近的植物不在同一个花盆里种植时,结果是重复的,但是营养液通过其他植物的根系进入另一个装有另一种植物的单独的花盆。此外,我们发现当植物暴露于邻居或渗滤液的物理存在时,同化率和气孔导度都会降低。我们没有发现两种处理在根构型上的差异。这些结果表明,植物会根据周围环境的变化而改变它们的生长,并且这种信号是通过土壤的液相传递的。我们的发现为高粱植物对邻近植物的地下信号的响应提供了见解,并为未来在高密度种植条件下提高作物性能的研究奠定了基础。
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引用次数: 0
Nutrient availability increases photosynthetic capacity without altering the cost of resource use for photosynthesis. 养分的可用性在不改变光合作用资源使用成本的情况下增加了光合作用能力。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-10-22 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf061
Jan A Lankhorst, Hugo J de Boer, Dorian C Behling, Paul L Drake, Evan A Perkowski, Karin T Rebel

Eco-evolutionary optimality (EEO) theory predicts that plants maximize resource investment in photosynthetic capacity at the lowest costs of acquiring and using such resources. However, current EEO-based models predict photosynthetic capacity based on climate alone, and omit costs for resource acquisition. To explore the link between leaf-level optimality and plant-level nitrogen acquisition costs across different soil environments, we grew two commonly co-occurring species in a greenhouse under three nutrient fertilization levels in sand and two natural soils with matching nutrient availability to the fertilization levels in sand. At the end of the experiment, we measured the maximum rate of Rubisco carboxylation (V cmax), δ¹³C-derived leaf-to-air CO2 partial pressure ratio (ci /ca ), and structural carbon costs for nitrogen acquisition. Increasing nutrient availability increased V cmax (P < .001) and decreased carbon costs for nitrogen acquisition (P < .001), similarly in sand and natural soils (P > .1 for both). Yet, the leaf ci /ca remained unchanged across treatments in sand (P = .426) and natural soils (P = .499), consistent with the current EEO-models assumption of climate-dependent optimality. These findings support the general principle that nutrient scarcity increases acquisition costs, while also highlighting a gap in current model formulations that neglect nutrient effects on photosynthetic acclimation.

生态进化最优(EEO)理论预测,植物在获取和利用光合能力的成本最低的情况下,最大限度地提高资源投资。然而,目前基于eeo的模型仅根据气候预测光合能力,而忽略了资源获取的成本。为了探索不同土壤环境下叶片水平最优性与植物水平氮获取成本之间的联系,我们在温室中培养了两种常见的共发生物种,分别在3种养分水平的沙地和2种养分有效性与沙地施肥水平相匹配的自然土壤中。在实验结束时,我们测量了Rubisco羧化的最大速率(V cmax), δ¹³c衍生的叶片与空气CO2分压比(ci /ca),以及氮获取的结构碳成本。在沙土和天然土壤中,增加养分有效性增加了vcmax (P < 0.001),降低了氮获取的碳成本(P < 0.001),两者的P < 0.1)。然而,在沙地(P = .426)和自然土壤(P = .499)处理中,叶片ci /ca保持不变,这与当前eeo模型的气候依赖最优性假设一致。这些发现支持了营养匮乏增加获取成本的一般原则,同时也强调了当前模型公式中忽视营养对光合适应的影响的差距。
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引用次数: 0
Genomic resources and genetic improvement of vital tropical and subtropical fruit crops: current status and prospects. 热带和亚热带重要水果作物基因组资源与遗传改良:现状与展望
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-10-17 eCollection Date: 2025-12-01 DOI: 10.1093/aobpla/plaf059
Anupama Roy, Tilak Chandra, Raju Mondal, Johiruddin Molla, Sarika Jaiswal, Manish Srivastava, Dinesh Kumar, Kutubuddin A Molla, Mir Asif Iquebal

Fruits are integral to agriculture and receive considerable attention due to their multifold health and nutritional benefits, particularly in the post-pandemic era. The wide range of climatic conditions gives rise to a myriad of fruits grown in different agro-climatic zones; however, fruits grown in tropical and subtropical zones deserve particular attention by virtue of their bountiful nutritional compounds and contribution to substantial growth in the economic sector. Nevertheless, their production is severely affected by their perishable and delicate nature, often limited by various biotic and abiotic factors that result in pre- and post-harvest losses. Scientific advancements have catalyzed efforts to augment the production of tropical and subtropical fruits through genetic and genomic interventions, resulting in the development of numerous advanced genomic resources. These innovations present new opportunities to address key challenges in fruit production, including the mitigation of anti-nutritional factors, improvement of sensory attributes, extension of both pre- and post-harvest shelf-life, chilling sensitivities, and ancillary crop improvements. This review provides a comprehensive synthesis of the genetic and genomic resources available for influential tropical and subtropical fruits, with an emphasis on their potential impact in the context of market acceptability and economic feasibility. These include whole-genome sequencing, which provides insights into domestication and adaptation processes; quantitative traits facilitating the identification of loci associated with desirable traits; functional genomics, enabling biotechnological interventions; the miRNA repertoire for precise trait modulation; and the integration of these resources with CRISPR/Cas9 for tailoring trait modification and recovery. Furthermore, the review highlights the role of web-based platforms that enhance stakeholder engagement and marketing strategies, thereby accelerating the translational potential of research and development in this field. Moreover, the inclusion of single-cell approaches for uncovering cellular heterogeneity, along with multi-omics strategies for dissecting complex traits, is critically discussed. Collectively, these genomic resources are poised to drive transformative changes in the production and utilization of tropical and subtropical fruits, contributing to global nutritional security and sustainable horticultural practices.

水果是农业不可或缺的组成部分,因其具有多方面的健康和营养价值而受到相当大的关注,特别是在大流行后时代。广泛的气候条件产生了无数的水果生长在不同的农业气候带;但是,生长在热带和亚热带地区的水果值得特别注意,因为它们含有丰富的营养化合物,并对经济部门的大幅度增长作出贡献。然而,它们易腐烂和脆弱的特性严重影响了它们的生产,往往受到各种生物和非生物因素的限制,导致收获前和收获后的损失。科学的进步促进了通过遗传和基因组干预来增加热带和亚热带水果产量的努力,从而开发了许多先进的基因组资源。这些创新为解决水果生产中的关键挑战提供了新的机遇,包括减少抗营养因素、改善感官属性、延长收获前和收获后的保质期、冷却敏感性和辅助作物改进。本文综述了具有影响力的热带和亚热带水果的遗传和基因组资源,重点介绍了它们在市场可接受性和经济可行性方面的潜在影响。其中包括全基因组测序,它提供了对驯化和适应过程的见解;数量性状有助于识别与理想性状相关的位点;功能基因组学,实现生物技术干预;精确调节性状的miRNA库;并将这些资源与CRISPR/Cas9整合,以定制性状修饰和恢复。此外,该综述还强调了基于网络的平台在加强利益相关者参与和营销策略方面的作用,从而加速了该领域研究和开发的转化潜力。此外,还对揭示细胞异质性的单细胞方法以及解剖复杂性状的多组学策略进行了批判性讨论。总的来说,这些基因组资源有望推动热带和亚热带水果生产和利用的变革,为全球营养安全和可持续园艺实践做出贡献。
{"title":"Genomic resources and genetic improvement of vital tropical and subtropical fruit crops: current status and prospects.","authors":"Anupama Roy, Tilak Chandra, Raju Mondal, Johiruddin Molla, Sarika Jaiswal, Manish Srivastava, Dinesh Kumar, Kutubuddin A Molla, Mir Asif Iquebal","doi":"10.1093/aobpla/plaf059","DOIUrl":"10.1093/aobpla/plaf059","url":null,"abstract":"<p><p>Fruits are integral to agriculture and receive considerable attention due to their multifold health and nutritional benefits, particularly in the post-pandemic era. The wide range of climatic conditions gives rise to a myriad of fruits grown in different agro-climatic zones; however, fruits grown in tropical and subtropical zones deserve particular attention by virtue of their bountiful nutritional compounds and contribution to substantial growth in the economic sector. Nevertheless, their production is severely affected by their perishable and delicate nature, often limited by various biotic and abiotic factors that result in pre- and post-harvest losses. Scientific advancements have catalyzed efforts to augment the production of tropical and subtropical fruits through genetic and genomic interventions, resulting in the development of numerous advanced genomic resources. These innovations present new opportunities to address key challenges in fruit production, including the mitigation of anti-nutritional factors, improvement of sensory attributes, extension of both pre- and post-harvest shelf-life, chilling sensitivities, and ancillary crop improvements. This review provides a comprehensive synthesis of the genetic and genomic resources available for influential tropical and subtropical fruits, with an emphasis on their potential impact in the context of market acceptability and economic feasibility. These include whole-genome sequencing, which provides insights into domestication and adaptation processes; quantitative traits facilitating the identification of loci associated with desirable traits; functional genomics, enabling biotechnological interventions; the miRNA repertoire for precise trait modulation; and the integration of these resources with CRISPR/Cas9 for tailoring trait modification and recovery. Furthermore, the review highlights the role of web-based platforms that enhance stakeholder engagement and marketing strategies, thereby accelerating the translational potential of research and development in this field. Moreover, the inclusion of single-cell approaches for uncovering cellular heterogeneity, along with multi-omics strategies for dissecting complex traits, is critically discussed. Collectively, these genomic resources are poised to drive transformative changes in the production and utilization of tropical and subtropical fruits, contributing to global nutritional security and sustainable horticultural practices.</p>","PeriodicalId":48955,"journal":{"name":"AoB Plants","volume":"17 6","pages":"plaf059"},"PeriodicalIF":2.4,"publicationDate":"2025-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12635627/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145589498","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Trichome density and herbivore behaviour on tomato is influenced by herbivory, plant age, and leaf surface. 番茄毛状体密度和草食行为受草食性、植株年龄和叶片表面的影响。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-10-07 eCollection Date: 2025-10-01 DOI: 10.1093/aobpla/plaf057
Sunil Aryal, Manish Gautam, Justin George, Gadi V P Reddy, Rupesh Kariyat

Leaf trichomes in plants act as the first line of physical defence against herbivory, in addition to many other reported functions. Although trichomes have been found to vary intraspecifically and can be induced by herbivory, their interactive effects under additional factors, such as plant age and abaxial vs. adaxial leaf surfaces, are less understood. Here, using five common tomato varieties, we explored the effects of these factors and their interactions on trichome type and density. We quantified the densities of Type VI glandular trichomes, non-glandular trichomes, and total trichomes on abaxial and adaxial leaf surfaces, and total leaf trichomes with and without herbivory by Spodoptera exigua at both vegetative and reproductive stages. Further, we also tested whether the time taken to initiate feeding by S. exigua larvae could be influenced by the number of trichomes on the adaxial and abaxial surfaces. The results showed that there is significant variation in trichome density among varieties and leaf surfaces. Also, there were differences in herbivory-induced trichome production, with variable responses across varieties and growth stages. Bioassay results showed that insects took longer to initiate feeding on the abaxial leaf surface than on the adaxial surface, potentially due to the higher density of non-glandular trichomes on the abaxial side. Collectively, we report that the regulation and development of trichomes on the leaf surface of tomatoes is governed by multiple factors, with potential consequences for herbivore feeding, suggesting how physical defences play a significant role in insect-plant interactions.

除了许多其他已报道的功能外,植物的叶毛是抵御食草动物的第一道物理防线。虽然已经发现毛状体在种内变化,并且可以由草食诱导,但它们在其他因素(如植物年龄和叶片背面与正面)下的相互作用尚不清楚。本文以5个常见番茄品种为研究对象,探讨了这些因素及其相互作用对毛状体类型和密度的影响。定量分析了夜蛾在营养期和生殖期叶片背面和正面的VI型腺毛、非腺毛、总毛密度,以及有无草食的总毛密度。此外,我们还测试了S. exigua幼虫开始摄食所需的时间是否会受到正面和背面毛状体数量的影响。结果表明,品种间和叶面间毛状体密度存在显著差异。此外,草食诱导的毛状体产量也存在差异,不同品种和生长阶段的反应不同。生物测定结果表明,昆虫在叶片背面开始取食的时间比在叶片正面开始取食的时间要长,这可能是由于叶片背面的非腺毛密度更高。总的来说,我们报告了番茄叶表面毛状体的调节和发育受多种因素的控制,对食草动物的摄食有潜在的影响,这表明物理防御在昆虫-植物相互作用中发挥了重要作用。
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引用次数: 0
Pattern-triggered immunity in blue and white seed cultivars of Papaver somniferum. 罂粟蓝、白种子品种模式触发免疫研究。
IF 2.4 3区 生物学 Q2 ECOLOGY Pub Date : 2025-10-06 eCollection Date: 2025-10-01 DOI: 10.1093/aobpla/plaf055
Jhonny Stalyn Hernández Orozco, Oksana Iakovenko, Adam Zeiner, Marie Hronková, Jiří Kubásek, Bára Kučerová, Iveta Vachová, Serban Pop, Natálie Hradecká, Petr Maršík, Markéta Macho, Pavla Fojtíková, Andrea Rychlá, Ondřej Hejna, Ivan Kulich, Michael Wrzaczek, Martin Janda

Papaver somniferum (poppy) is a traditional ingredient in Central and Eastern European cuisine and an important oilseed crop of the region. Since the main threat to stable poppy yield is pathogen infection, a detailed understanding of its defence mechanism is essential. The first robust layer of plant immunity, which plays a crucial role in combating pathogens, is pattern-triggered immunity (PTI). Here, we provide the first comprehensive insights into PTI in poppy. We selected four poppy varieties used in the food industry and investigated their response to various previously described peptide elicitors. Among all tested peptides, flg22 induced the most robust reactive oxygen species (ROS) burst, as well as triggering putative mitogen-activated protein kinase phosphorylation and seedling growth inhibition in all selected cultivars. We identified PsWRKY22 and PsPR2 as candidate marker genes suitable for monitoring poppy PTI responses. The tested poppy cultivars have low levels of salicylic acid. Callose accumulation was triggered by wounding but not by flg22. When studying PTI in plants, wounding is a challenge that needs to be considered, as it can obscure potential PTI responses. Our findings highlight conserved aspects of poppy immunity and the challenges of studying its PTI. The established pipeline facilitates improving our understanding of poppy immunity and has the potential for widespread application in breeding and improving selection for broad-spectrum disease resistance provided by enhanced PTI.

罂粟(罂粟)是中欧和东欧菜肴的传统成分,也是该地区重要的油籽作物。由于对罂粟稳定产量的主要威胁是病原体感染,因此对其防御机制的详细了解至关重要。植物免疫的第一个强大层是模式触发免疫(PTI),它在对抗病原体中起着至关重要的作用。在这里,我们提供了第一个全面的见解在罂粟的PTI。我们选择了四种在食品工业中使用的罂粟品种,并研究了它们对各种先前描述的肽激发子的反应。在所有测试的多肽中,flg22诱导的活性氧(ROS)爆发最为强烈,并在所有选择的品种中引发了丝裂原激活的蛋白激酶磷酸化和幼苗生长抑制。我们鉴定出PsWRKY22和PsPR2是适于监测罂粟PTI反应的候选标记基因。被测试的罂粟品种的水杨酸含量很低。损伤引起胼胝质积累,而flg22不引起胼胝质积累。当研究植物的PTI时,伤害是一个需要考虑的挑战,因为它可以模糊潜在的PTI反应。我们的发现突出了罂粟免疫的保守方面以及研究其PTI的挑战。已建立的管道有助于提高我们对罂粟免疫的理解,并具有广泛应用于育种和改进选择的潜力,增强的PTI提供了广谱抗病性。
{"title":"Pattern-triggered immunity in blue and white seed cultivars of <i>Papaver somniferum</i>.","authors":"Jhonny Stalyn Hernández Orozco, Oksana Iakovenko, Adam Zeiner, Marie Hronková, Jiří Kubásek, Bára Kučerová, Iveta Vachová, Serban Pop, Natálie Hradecká, Petr Maršík, Markéta Macho, Pavla Fojtíková, Andrea Rychlá, Ondřej Hejna, Ivan Kulich, Michael Wrzaczek, Martin Janda","doi":"10.1093/aobpla/plaf055","DOIUrl":"10.1093/aobpla/plaf055","url":null,"abstract":"<p><p><i>Papaver somniferum</i> (poppy) is a traditional ingredient in Central and Eastern European cuisine and an important oilseed crop of the region. Since the main threat to stable poppy yield is pathogen infection, a detailed understanding of its defence mechanism is essential. The first robust layer of plant immunity, which plays a crucial role in combating pathogens, is pattern-triggered immunity (PTI). Here, we provide the first comprehensive insights into PTI in poppy. We selected four poppy varieties used in the food industry and investigated their response to various previously described peptide elicitors. Among all tested peptides, flg22 induced the most robust reactive oxygen species (ROS) burst, as well as triggering putative mitogen-activated protein kinase phosphorylation and seedling growth inhibition in all selected cultivars. We identified <i>PsWRKY22</i> and <i>PsPR2</i> as candidate marker genes suitable for monitoring poppy PTI responses. The tested poppy cultivars have low levels of salicylic acid. Callose accumulation was triggered by wounding but not by flg22. When studying PTI in plants, wounding is a challenge that needs to be considered, as it can obscure potential PTI responses. Our findings highlight conserved aspects of poppy immunity and the challenges of studying its PTI. The established pipeline facilitates improving our understanding of poppy immunity and has the potential for widespread application in breeding and improving selection for broad-spectrum disease resistance provided by enhanced PTI.</p>","PeriodicalId":48955,"journal":{"name":"AoB Plants","volume":"17 5","pages":"plaf055"},"PeriodicalIF":2.4,"publicationDate":"2025-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12560825/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145402565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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