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Exitrons: offering new roles to retained introns - the novel regulators of protein diversity and utility 外显子:为保留的内含子提供新角色--蛋白质多样性和实用性的新型调节器
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-20 DOI: 10.1093/aobpla/plae014
Muhammed Shamnas v, Akanksha Singh, Anuj Kumar, Gyan Prakash Mishra, Subodh Kumar Sinha
Exitrons are exonic-introns. This subclass of intron-retention alternative splicing does not contain a Pre-Terminating stop Codon. Therefore, when retained, they are always a part of a protein. Intron retention is a frequent phenomenon predominantly found in plants, which results in either the degradation of the transcripts or can serve as a stable intermediate to be processed upon induction by specific signals or the cell status. Interestingly, exitrons have coding ability and may confer additional attributes to the proteins that retain them. Therefore, exitron-containing and exitron-spliced isoforms will be a driving force for creating protein diversity in the proteome of an organism. This review establishes a basic understanding of exitron, discussing its genesis, key features, identification methods, and functions. We also try to depict its other potential roles. The present review also aims to provide a fundamental background to those who found such exitronic sequences in their gene(s) and to speculate the future course of studies.
外显子是外显子内含子。这种内含子保留替代剪接亚类不包含终止前终止密码子。因此,当内含子被保留时,它们总是蛋白质的一部分。内含子保留是一种常见现象,主要存在于植物中,它要么导致转录本降解,要么作为稳定的中间体,在特定信号或细胞状态的诱导下进行处理。有趣的是,外子具有编码能力,并可能赋予保留外子的蛋白质额外的属性。因此,含出口子和出口子剪接异构体将成为在生物体蛋白质组中创造蛋白质多样性的驱动力。这篇综述将对 exitron 有一个基本的了解,讨论它的起源、主要特征、鉴定方法和功能。我们还试图描述它的其他潜在作用。本综述的目的还在于为那些在其基因中发现了此类exitronic序列的人提供一个基本的背景知识,并对未来的研究方向进行推测。
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引用次数: 0
Does stomatal patterning in amphistomatous leaves minimize the CO2 diffusion path length within leaves? 两性叶片的气孔模式化是否能最大程度地减少叶片内二氧化碳的扩散路径长度?
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-18 DOI: 10.1093/aobpla/plae015
Jacob L Watts, Graham J Dow, Thomas N Buckley, Christopher D Muir
Photosynthesis is co-limited by multiple factors depending on the plant and its environment. These include biochemical rate limitations, internal and external water potentials, temperature, irradiance, and carbon dioxide (CO2). Amphis- tomatous leaves have stomata on both abaxial and adaxial leaf surfaces. This feature is considered an adaptation to alleviate CO2 diffusion limitations in pro- ductive environments as the diffusion path length from stomate to chloroplast is effectively halved in amphistomatous leaves. Plants may also reduce CO2 limitations through other aspects of optimal stomatal anatomy: stomatal den- sity, distribution, patterning, and size. A number of studies have demonstrated that stomata are overdispersed compared to a random distribution on a sin- gle leaf surface; however, despite their prevelance in nature and near ubiquity among crop species, much less is known about stomatal anatomy in amphis- tomatous leaves, especially the coordination between leaf surfaces. Here we use novel spatial statistics based on simulations and photosynthesis modeling to test hypotheses about how amphistomatous plants may optimize CO2 diffusion in the model angiosperm Arabidopsis thaliana grown in different light environ- ments. We find that 1) stomata are overdispersed, but not ideally dispersed, on both leaf surfaces across all light treatments; 2) the patterning of stomata on abaxial and adaxial leaf surfaces is independent; and 3) the theoretical im- provements to photosynthesis from abaxial-adaxial stomatal coordination are miniscule (≪ 1%) across the range of feasible parameter space. However, we also find that 4) stomatal size is correlated with the mesophyll volume that it supplies with CO2, suggesting that plants may optimize CO2 diffusion limita- tions through alternative pathways other than ideal, uniform stomatal spacing. We discuss the developmental, physical, and evolutionary constraits which may prohibit plants from reaching this theoretical adaptive peak of uniform stomatal spacing and inter-surface stomatal coordination. These findings contribute to our understanding of variation in the anatomy of amphistomatous leaves.
光合作用受多种因素的共同限制,这取决于植物及其所处的环境。这些因素包括生化速率限制、内部和外部水势、温度、辐照度和二氧化碳(CO2)。两栖茄的叶片背面和正面都有气孔。这一特征被认为是一种适应,可减轻二氧化碳在亲导管环境中的扩散限制,因为在两性叶中,从气孔到叶绿体的扩散路径长度实际上缩短了一半。植物还可以通过最佳气孔解剖的其他方面来减少二氧化碳的限制:气孔密度、分布、图案和大小。许多研究表明,与随机分布在单个叶面上的气孔相比,气孔过度分散;然而,尽管气孔在自然界中普遍存在,而且在作物物种中几乎无处不在,但人们对两栖叶片的气孔解剖,尤其是叶面之间的协调知之甚少。在这里,我们利用基于模拟和光合作用建模的新型空间统计方法,检验了两栖植物如何优化在不同光照环境下生长的被子植物模型拟南芥的二氧化碳扩散的假设。我们发现:1)在所有光照处理中,气孔都过度分散在两个叶面上,但不是理想的分散;2)气孔在叶背面和叶正面的模式是独立的;3)在可行的参数空间范围内,气孔背面-正面协调对光合作用的理论影响微乎其微(≪1%≫)。然而,我们还发现 4) 气孔大小与其提供二氧化碳的叶肉体积相关,这表明植物可能会通过理想、均匀的气孔间距以外的其他途径优化二氧化碳扩散限制。我们讨论了可能阻碍植物达到均匀气孔间距和表面间气孔协调这一理论适应高峰的发育、物理和进化特征。这些发现有助于我们理解两性叶片解剖结构的变异。
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引用次数: 0
Symbiotic fungi from a wild grass (Celtica gigantea) increase the growth, grain yield and quality of tritordeum under field conditions 在田间条件下,来自野生草(Celtica gigantea)的共生真菌能提高三叶草的生长、谷物产量和质量
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-13 DOI: 10.1093/aobpla/plae013
Iñigo Zabalgogeazcoa, Juan B Arellano, Elena Mellado-Ortega, Francisco Barro, Ana Martinez-Castilla, Virginia Gonzalez-Blanco, Beatriz R Vázquez de Aldana
Plants function in symbiosis with numerous microorganisms, which might contribute to their adaptation and performance. In this study, we tested whether fungal strains in symbiotic interaction with roots of Celtica gigantea, a wild grass adapted to nutrient-poor soils in semiarid habitats, could improve the field performance of the agricultural cereal tritordeum (Triticum durum x Hordeum chilense). Seedlings of tritordeum were inoculated with 12 different fungal strains isolated from roots of Celtica gigantea that were first proved to promote growth of tritordeum plants under greenhouse conditions. The inoculated seedlings were transplanted to field plots at two locations belonging to different climatic zones in terms of mean temperatures and precipitation in the Iberian Peninsula. Only one strain, Diaporthe iberica T6, had a significant effect on plant height, number of tillers and grain yield in one location. This result showed a substantial divergence between the results of greenhouse and field tests. In terms of grain nutritional quality, several parameters were differentially affected at both locations: Diaporthe T6, Pleosporales T7, Zygomycota T29 and Zygomycota T80 increased the content of total carotenoids, mainly lutein, in the colder location; whereas gluten proteins increased with several treatments in the warmer location. In conclusion, early inoculation of tritordeum plants with fungal symbionts had substantial beneficial effects on subsequent plant growth and development in the field. Regarding grain nutritional quality, the effect of inoculation was affected by the agroclimatic differences between both field locations.
植物与许多微生物共生,这可能有助于植物的适应和表现。在这项研究中,我们测试了与大叶芹(一种适应半干旱地区营养不良土壤的野生草)根系共生的真菌菌株能否改善农用谷物大叶芹(Triticum durum x Hordeum chilense)的田间表现。在三棱草幼苗中接种了 12 种不同的真菌菌株,这些菌株是从大叶芹根部分离出来的,首次被证明在温室条件下能促进三棱草植株的生长。接种后的幼苗被移栽到伊比利亚半岛平均温度和降水量属于不同气候带的两个地点的田间小块中。在一个地点,只有一种菌株 Diaporthe iberica T6 对株高、分蘖数和谷物产量有显著影响。这一结果表明,温室试验和田间试验的结果存在很大差异。在谷物营养品质方面,两个地点的一些参数受到不同的影响:Diaporthe T6、Pleosporales T7、Zygomycota T29 和 Zygomycota T80 增加了寒冷地区总类胡萝卜素的含量,主要是叶黄素;而在温暖地区,谷蛋白在几种处理中都有所增加。总之,给三叶草植株早期接种真菌共生体对植株随后的田间生长和发育有很大的益处。在谷物营养质量方面,接种的效果受到两地农业气候差异的影响。
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引用次数: 0
Schizachyrium scoparium (C4) better tolerates drought than Andropogon gerardii (C4) via constant CO2 supply for photosynthesis during water stress 通过在水分胁迫期间为光合作用持续供应二氧化碳,五味子(C4)比红花酢浆草(C4)更能耐旱
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-07 DOI: 10.1093/aobpla/plae012
Alina Dekirmenjian, Diego Montano, Michelle L Budny, Nathan P Lemoine
Climate change is dramatically altering global precipitation patterns across terrestrial ecosystems, making it critically important that we understand both how and why plant species vary in their drought sensitivities. Andropogon gerardii and Schizachyrium scoparium, both C4 grasses, provide a model system for understanding the physiological mechanisms that determine how species of a single functional type can differ in drought responses, an issue remains a critical gap in our ability to model and predict the impacts of drought on grassland ecosystems. Despite the greater lability of foliar water content, previous experiments have demonstrated that S. scoparium maintains higher photosynthetic capacity during droughts. It is therefore likely that the ability of S. scoparium to withstand drought instead derives from a greater metabolic resistance to drought. Here, we tested the following hypotheses: (H1) Andropogon gerardii is more vulnerable to drought than S. scoparium at both the population and organismal levels, (H2) Andropogon gerardii is less stomatally-flexible than S. scoparium, and (H3) Andropogon gerardii is more metabolically-limited than S. scoparium. Our results indicate that it is actually stomatal limitations of CO2 supply that limit A. gerardii photosynthesis during drought. Schizachyrium scoparium was more drought-resistant than A. gerardii based on long-term field data, organismal biomass production, and physiological gas exchange measurements. While both S. scoparium and A. gerardii avoided metabolic limitation of photosynthesis, CO2 supply of A. gerardii was greatly reduced during late-stage drought stress. That two common, co-occurring C4 species possess such different responses to drought highlights the physiological variability inherent within plant functional groups and underscores the need for more studies of C4 drought tolerance.
气候变化正在极大地改变全球陆地生态系统的降水模式,因此我们必须了解植物物种对干旱的敏感性如何以及为何不同。Andropogon gerardii和Schizachyrium scoparium都是C4禾本科植物,它们提供了一个模型系统,用于了解决定单一功能类型的物种如何对干旱做出不同反应的生理机制。尽管S. scoparium的叶片含水量更不稳定,但之前的实验表明,S. scoparium在干旱期间能保持更高的光合能力。因此,莨菪抵御干旱的能力很可能来自于其新陈代谢对干旱更强的抵抗力。在此,我们测试了以下假设:(H1)在种群和生物体水平上,Andropogon gerardii 比 S. scoparium 更容易受到干旱的影响;(H2)Andropogon gerardii 的气孔灵活性比 S. scoparium 差;(H3)Andropogon gerardii 的代谢限制比 S. scoparium 多。我们的研究结果表明,实际上是气孔对二氧化碳供应的限制限制了 A. gerardii 在干旱期间的光合作用。根据长期的实地数据、生物量生产和生理气体交换测量结果,Schizachyrium scoparium 比 A. gerardii 更耐旱。虽然 S. scoparium 和 A. gerardii 都避免了光合作用的代谢限制,但在干旱胁迫后期,A. gerardii 的二氧化碳供应量大大减少。两种常见的共生 C4 物种对干旱的反应如此不同,凸显了植物功能群内固有的生理变异性,并强调了对 C4 干旱耐受性进行更多研究的必要性。
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引用次数: 0
Vertebrates can be more important pollinators than invertebrates on islands: the case of Malva (=Lavatera) arborea L. 在岛屿上,脊椎动物可能是比无脊椎动物更重要的授粉者:Malva (=Lavatera) arborea L.的案例。
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-01 eCollection Date: 2024-02-01 DOI: 10.1093/aobpla/plae010
Cristina Robles, Víctor Romero-Egea, Anna Traveset, Rocío Ruiz de Ybáñez, Sandra Hervías-Parejo

Premise of the study: On islands, flowering plants tend to be more generalist in their pollination needs, as insects (the main pollinators of flowering plants) are underrepresented in these ecosystems compared to the mainland. In addition, some vertebrate species that are typically insectivorous or granivorous on the mainland are forced to broaden their diet and consume other resources such as nectar or pollen on the islands. The shrub Malva arborea, with its large and colourful flowers, attracts different groups of potential pollinators. This study aimed to compare the effectiveness of vertebrates versus insects in an insular population of M. arborea and to investigate its reproductive system. Methods: For three groups of taxa (insects, birds and lizards), we assessed the two components of pollination effectiveness: (i) the quantitative component (i.e. number of visits and number of flowers contacted) through direct observations of flowers; and (ii) the qualitative component (fruit and seed set, number and size of seeds and proportion of seedling emergence) through pollinator exclusion experiments. Key results: Vertebrates (birds and lizards) were quantitatively the most effective pollinators, followed by insects. However, when all three groups visited the flowers, fruit and seed set were higher than when any of them were excluded. We also found that M. arborea has hermaphrodite flowers and is able to reproduce by autogamy, although less efficiently than when pollinated by animals. Conclusions: Both vertebrates and insects play an important role in the reproduction of M. arborea. Although the plant does not need pollinators to produce seeds, its reproductive success increases when all pollinators are allowed to visit the flowers. Besides providing new information on M. arborea, these findings may help to better understand the role of different pollinator groups in the reproduction of other plant species, especially on islands where the co-occurrence of vertebrate and invertebrate pollination in the same plant species is usual.

研究的前提:与大陆相比,昆虫(开花植物的主要传粉者)在这些生态系统中的比例较低,因此在岛屿上,开花植物的授粉需求往往更为广泛。此外,一些在大陆上通常以昆虫为食或以谷物为食的脊椎动物物种在岛屿上也不得不扩大食谱,消耗其他资源,如花蜜或花粉。灌木锦葵花大色艳,吸引着不同的潜在授粉者。本研究旨在比较脊椎动物与昆虫在海岛锦葵种群中的作用,并调查其繁殖系统。研究方法对于三类类群(昆虫、鸟类和蜥蜴),我们评估了授粉效果的两个组成部分:(i) 通过直接观察花朵,评估授粉效果的数量组成部分(即访问次数和接触的花朵数量);(ii) 通过授粉者排斥实验,评估授粉效果的质量组成部分(果实和种子的结实率、种子的数量和大小以及出苗率)。主要结果从数量上看,脊椎动物(鸟类和蜥蜴)是最有效的授粉者,其次是昆虫。然而,当这三类昆虫都光顾花朵时,果实和种子的结实率要高于排除任何一类昆虫的情况。我们还发现,乔木雌花是雌雄同体的,能够通过自交进行繁殖,但繁殖效率低于动物授粉时。结论脊椎动物和昆虫在文冠果的繁殖中都扮演着重要角色。虽然该植物不需要传粉者来生产种子,但如果允许所有传粉者都来花丛中传粉,其繁殖成功率就会提高。这些发现除了为文冠果提供了新的信息外,还有助于更好地了解不同授粉者群体在其他植物物种繁殖过程中的作用,尤其是在一些岛屿上,脊椎动物和无脊椎动物在同一植物物种中共同授粉的现象非常普遍。
{"title":"Vertebrates can be more important pollinators than invertebrates on islands: the case of <i>Malva (=Lavatera) arborea</i> L.","authors":"Cristina Robles, Víctor Romero-Egea, Anna Traveset, Rocío Ruiz de Ybáñez, Sandra Hervías-Parejo","doi":"10.1093/aobpla/plae010","DOIUrl":"10.1093/aobpla/plae010","url":null,"abstract":"<p><p><i>Premise of the study:</i> On islands, flowering plants tend to be more generalist in their pollination needs, as insects (the main pollinators of flowering plants) are underrepresented in these ecosystems compared to the mainland. In addition, some vertebrate species that are typically insectivorous or granivorous on the mainland are forced to broaden their diet and consume other resources such as nectar or pollen on the islands. The shrub <i>Malva arborea</i>, with its large and colourful flowers, attracts different groups of potential pollinators. This study aimed to compare the effectiveness of vertebrates versus insects in an insular population of <i>M. arborea</i> and to investigate its reproductive system. <i>Methods:</i> For three groups of taxa (insects, birds and lizards), we assessed the two components of pollination effectiveness: (i) the quantitative component (i.e. number of visits and number of flowers contacted) through direct observations of flowers; and (ii) the qualitative component (fruit and seed set, number and size of seeds and proportion of seedling emergence) through pollinator exclusion experiments. <i>Key results:</i> Vertebrates (birds and lizards) were quantitatively the most effective pollinators, followed by insects. However, when all three groups visited the flowers, fruit and seed set were higher than when any of them were excluded. We also found that <i>M. arborea</i> has hermaphrodite flowers and is able to reproduce by autogamy, although less efficiently than when pollinated by animals. <i>Conclusions:</i> Both vertebrates and insects play an important role in the reproduction of <i>M. arborea</i>. Although the plant does not need pollinators to produce seeds, its reproductive success increases when all pollinators are allowed to visit the flowers. Besides providing new information on <i>M. arborea,</i> these findings may help to better understand the role of different pollinator groups in the reproduction of other plant species, especially on islands where the co-occurrence of vertebrate and invertebrate pollination in the same plant species is usual.</p>","PeriodicalId":48955,"journal":{"name":"AoB Plants","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10944019/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140144379","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development and application of an inexpensive open-source dendrometer for detecting xylem water potential and radial stem growth at high spatial and temporal resolution. 开发和应用廉价的开放源树枝仪,以高时空分辨率检测木质部水势和茎的径向生长。
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-28 eCollection Date: 2024-02-01 DOI: 10.1093/aobpla/plae009
Sean M Gleason, Jared J Stewart, Brendan Allen, Stephanie K Polutchko, Jordan McMahon, Daniel Spitzer, David M Barnard

There is currently a need for inexpensive, continuous, non-destructive water potential measurements at high temporal resolution (<1 min). We describe here the development and testing of an entirely open-source dendrometer that, when combined with periodic Scholander pressure chamber measurements, provides sub-minute resolution estimates of water potential when placed on tissues exhibiting little or no secondary growth (petioles, monocotyledon stems). The dendrometer can also be used to measure radial growth of stems and branches when placed on dicotyledon and gymnosperm species. The dendrometer can be interfaced directly with a computer in real time in the lab or greenhouse, or connected to a datalogger for long periods of use in the field on batteries. We tested this device on a herbaceous dicotyledon (Helianthus annuus) (petioles and stems) and a monocotyledon (Zea mays) species (stems) for 1 week during dehydration and re-watering treatments under laboratory conditions. We also demonstrated the ability of the device to record branch and trunk diameter variation of a woody dicotyledon (Rhus typhina) in the field. Under laboratory conditions, we compared our device (hereafter 'contact' dendrometer) with modified versions of another open-source dendrometer (the 'optical' dendrometer). Overall, contact and optical dendrometers were well aligned with one another, with Pearson correlation coefficients ranging from 0.77 to 0.97. Both dendrometer devices were well aligned with direct measurements of xylem water potential, with calibration curves exhibiting significant non-linearity, especially at water potentials near the point of incipient plasmolysis, with pseudo R2 values (Efron) ranging from 0.89 to 0.99. Overall, both dendrometers were comparable and provided sufficient resolution to detect subtle differences in stem water potential (ca. 50 kPa) resulting from light-induced changes in transpiration, vapour pressure deficit and drying/wetting soils. All hardware designs, alternative configurations, software and build instructions for the contact dendrometers are provided.

目前,我们需要在实验室条件下,在脱水和再浇水处理过程中,以较高的时间分辨率对一种双子叶植物(Helianthus annuus)(叶柄和茎)和一种单子叶植物(Zea mays)(茎)进行为期一周的廉价、连续、无损的水势测量。我们还在现场演示了该装置记录木本双子叶植物(Rhus typhina)的枝干直径变化的能力。在实验室条件下,我们将我们的设备(以下简称 "接触式 "测枝仪)与另一种开源测枝仪("光学 "测枝仪)的改进版进行了比较。总体而言,接触式色差计和光学色差计彼此吻合得很好,皮尔逊相关系数从 0.77 到 0.97 不等。两种树枝仪装置都能很好地与木质部水势的直接测量结果保持一致,校准曲线表现出明显的非线性,尤其是在水势接近刚开始发生质解时,假 R2 值(Efron)从 0.89 到 0.99 不等。总体而言,这两种树枝仪的性能相当,分辨率足以检测到光照引起的蒸腾、蒸汽压力不足和土壤干燥/潮湿变化造成的茎干水势(约 50 千帕)的细微差别。提供了接触式测深仪的所有硬件设计、替代配置、软件和安装说明。
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引用次数: 0
Selfing in epiphytic bromeliads compensates for the limited pollination services provided by nectarivorous bats in a neotropical montane forest 附生凤梨的自交可补偿新热带山地森林中食蜜蝙蝠提供的有限授粉服务
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-26 DOI: 10.1093/aobpla/plae011
Stephanie Núñez-Hidalgo, Alfredo Cascante-Marín
Plants with specialized pollination systems frequently exhibit adaptations for self-pollination, and this contradictory situation has been explained in terms of the reproductive assurance function of selfing. In the Neotropics, several plant lineages rely on specialized vertebrate pollinators for sexual reproduction, including the highly diverse Bromeliaceae family, which also displays a propensity for selfing. Thus far, the scarce evidence on the role of selfing in bromeliads and in other neotropical plant groups is inconclusive. To provide insights into the evolution and persistence of self-fertilization in the breeding systems of Bromeliaceae, we studied four sympatric epiphytic species from the genus Werauhia (Tillandsioideae) in Costa Rica. We documented their floral biology, pollination ecology, and breeding systems. We estimated the contribution of selfing by comparing the reproductive success between emasculated flowers requiring pollinator visits and unmanipulated flowers capable of selfing and exposed to open pollination across two flowering seasons. The studied species displayed specialized pollination by nectar-feeding bats as well as a high selfing ability (autofertility index values &gt; 0.53), which was attained by a delayed selfing mechanism. Fruit set from natural cross-pollination was low (&lt;26% in both years) and suggested limited pollinator visitation. In line with this, we found a very low bat visitation to flowers using video-camera recording, from 0 to 0.24 visits per plant per night. On the contrary, the contribution of selfing was comparatively significant since 54-80% of the fruit set from unmanipulated flowers can be attributed to autonomous self-pollination. We concluded that inadequate cross-pollination services diminished the reproductive success of the studied Werauhia, which was compensated for by a delayed selfing mechanism. The low negative effects of inbreeding on seed set and germination likely reinforce the persistence of selfing in this bromeliad group. These results suggest that selfing in bat-pollinated bromeliads may have evolved as a response to pollinator limitation.
具有专门传粉系统的植物经常表现出自花授粉的适应性,这种矛盾的情况可以用自花授粉的生殖保证功能来解释。在新热带地区,有几个植物种系依赖专门的脊椎动物传粉者进行有性生殖,其中包括种类繁多的凤梨科植物,它们也表现出自花授粉的倾向。到目前为止,关于自交在凤梨科和其他新热带植物群中的作用的证据还不多。为了深入了解自交在凤梨科植物繁殖系统中的进化和持续性,我们研究了哥斯达黎加 Werauhia 属(Tillandsioideae)的四个同域附生物种。我们记录了它们的花生物学、授粉生态学和繁殖系统。我们通过比较需要授粉者访问的雌花与能够自花授粉并在两个花季接受开放授粉的未受操纵的花之间的繁殖成功率,估计了自花授粉的贡献。所研究的物种显示了食蜜蝙蝠的专一授粉以及较高的自交能力(自交指数值为 0.53),这是通过延迟自交机制实现的。自然异花授粉的坐果率很低(两年均为 26%),这表明授粉者的访问量有限。与此相一致的是,我们通过摄像机记录发现,蝙蝠对花朵的访问量非常低,每株每晚的访问量从 0 到 0.24 次不等。相反,自花授粉的贡献相对较大,因为未经人工授粉的花朵所结出的果实中有 54-80% 都是自主自花授粉。我们的结论是,异花授粉服务不足降低了所研究的卫矛属植物的繁殖成功率,而延迟自花授粉机制则弥补了这一不足。近亲繁殖对结籽和发芽的负面影响较小,这可能加强了该凤梨科植物自花授粉的持续性。这些结果表明,蝙蝠授粉凤梨的自交可能是对授粉者限制的一种反应。
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引用次数: 0
Effect of life cycle and venation pattern on the coordination between stomatal and vein densities of herbs 生命周期和叶脉模式对草本植物气孔密度和叶脉密度协调的影响
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-20 DOI: 10.1093/aobpla/plae007
Guolan Liu, Peili Fu, Qinggong Mao, Jiangbao Xia, Wanli Zhao
Background and Aims Life cycle (annual vs perennial) and leaf venation pattern (parallel and reticular) are known to be related to water use strategies in herb species and critical adaptation to certain climatic conditions. However, the effect of these two traits and how they influence the coordination between vein density (vein length per area, VLA) and stomatal density (SD) remains unclear. Methods In this study, we examined the leaves of 53 herb species from a subtropical botanical garden in Guangdong Province, China, including herbs with different life cycle and leaf venation pattern. We assessed 21 leaf water related functional traits for all species, including leaf area (LA), major and minor VLA, major and minor vein diameter (VD), SD, and stomatal length (SL). Key Results The results showed no significant differences in mean SD and SL between either functional group (parallel venation vs reticular venation and annual vs perennial). However, parallel vein herbs and perennial herbs displayed a significantly higher mean LA and minor VD, and lower minor VLA compared to reticular vein herbs and annual herbs, respectively. There was a linear correlation between total VLA and SD in perennial and reticular vein herbs, but this kind of correlation was not found in annual and parallel vein herbs. The major VLA and minor VD were significantly affected by the interaction between life cycle and leaf venation pattern. Conclusions Our findings suggested that VLA, rather than SD, may serve as a more adaptable structure regulated by herbaceous plants to support the coordination between leaf water supply and demand in the context of different life cycles and leaf venation patterns. The results of the present study provide mechanistic understandings of functional advantages of different leaf types, which may involve in species fitness in community assembly and divergent responses to climate changes.
背景和目的 众所周知,生命周期(一年生与多年生)和叶脉模式(平行与网状)与草本植物的水分利用策略以及对特定气候条件的关键适应性有关。然而,这两个性状的作用以及它们如何影响叶脉密度(单位面积叶脉长度,VLA)和气孔密度(SD)之间的协调仍不清楚。方法 本研究考察了中国广东省亚热带植物园中 53 种草本植物的叶片,包括不同生命周期和叶脉形态的草本植物。我们评估了所有物种的 21 个叶片水分相关功能性状,包括叶面积(LA)、主要和次要叶脉直径(VLA)、主要和次要叶脉直径(VD)、SD 和气孔长度(SL)。主要结果 结果表明,两个功能组(平行脉与网状脉、一年生与多年生)之间的平均 SD 和 SL 没有明显差异。然而,与网状脉草本植物和一年生草本植物相比,平行脉草本植物和多年生草本植物的平均 LA 和小 VD 明显较高,而小 VLA 则较低。在多年生草本植物和网脉草本植物中,总VLA与SD之间存在线性相关,但在一年生草本植物和平行脉草本植物中没有发现这种相关性。生命周期与叶脉形态的交互作用对主要 VLA 和次要 VD 有显著影响。结论 我们的研究结果表明,在不同生命周期和叶脉模式下,VLA 而非 SD 可能是草本植物调节叶片水分供需平衡的一个适应性更强的结构。本研究的结果提供了对不同叶片类型功能优势的机理认识,这些优势可能涉及物种在群落组合中的适应性以及对气候变化的不同反应。
{"title":"Effect of life cycle and venation pattern on the coordination between stomatal and vein densities of herbs","authors":"Guolan Liu, Peili Fu, Qinggong Mao, Jiangbao Xia, Wanli Zhao","doi":"10.1093/aobpla/plae007","DOIUrl":"https://doi.org/10.1093/aobpla/plae007","url":null,"abstract":"Background and Aims Life cycle (annual vs perennial) and leaf venation pattern (parallel and reticular) are known to be related to water use strategies in herb species and critical adaptation to certain climatic conditions. However, the effect of these two traits and how they influence the coordination between vein density (vein length per area, VLA) and stomatal density (SD) remains unclear. Methods In this study, we examined the leaves of 53 herb species from a subtropical botanical garden in Guangdong Province, China, including herbs with different life cycle and leaf venation pattern. We assessed 21 leaf water related functional traits for all species, including leaf area (LA), major and minor VLA, major and minor vein diameter (VD), SD, and stomatal length (SL). Key Results The results showed no significant differences in mean SD and SL between either functional group (parallel venation vs reticular venation and annual vs perennial). However, parallel vein herbs and perennial herbs displayed a significantly higher mean LA and minor VD, and lower minor VLA compared to reticular vein herbs and annual herbs, respectively. There was a linear correlation between total VLA and SD in perennial and reticular vein herbs, but this kind of correlation was not found in annual and parallel vein herbs. The major VLA and minor VD were significantly affected by the interaction between life cycle and leaf venation pattern. Conclusions Our findings suggested that VLA, rather than SD, may serve as a more adaptable structure regulated by herbaceous plants to support the coordination between leaf water supply and demand in the context of different life cycles and leaf venation patterns. The results of the present study provide mechanistic understandings of functional advantages of different leaf types, which may involve in species fitness in community assembly and divergent responses to climate changes.","PeriodicalId":48955,"journal":{"name":"AoB Plants","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139947707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome-wide investigation of SQUAMOSA PROMOTER BINDING PROTEIN-LIKE genes in Liriodendron and functional characterization of LcSPL2 Liriodendron 中 SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 基因的全基因组调查和 LcSPL2 的功能特性分析
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-19 DOI: 10.1093/aobpla/plae008
Yu Zhang, Qinghua Hu, Xinyu Zhai, Zhonghua Tu, Jing Wang, Minxin Wang, Huogen Li
Premise The plant-specific SQUAMOSA promoter-binding protein-like (SPL) transcription factors play a pivotal role in various developmental processes, including leaf morphogenesis and vegetative-to-reproductive phase transition. Liriodendron chinense and Liriodendron tulipifera are widely used in landscaping due to their tulip-like flowers and peculiar leaves. However, the SPL gene family in Liriodendron has not been identified and systematically characterized. Methods We systematically identified and characterized the SPLs family members in Liriodendron, including phylogeny, gene structure, syntenic analyses. Subsequently, we quantified the expression patterns of LcSPLs across various tissue sites through RT-qPCR assays, hence identified the target gene, LcSPL2. Finally, we characterized the functions of LcSPL2 via ectopic transformation. Results Altogether, 17 LcSPL and 18 LtSPL genes were genome-widely identified in L. chinense and L. tulipifera respectively. All the 35 SPLs were grouped into nine clades. Both species had three SPL gene pairs arising from segmental duplication events, and the LcSPLs displayed high collinearity with the L. tulipifera genome. RT-qPCR assays showed that SPL genes were differentially expressed in different tissues, especially. Because LcSPL2 is highly expressed in pistils and leaves, it was selected to describe the SPL gene family of L. chinense by ectopic expression. We showed that overexpression of LcSPL2 in Arabidopsis thaliana resulted in earlier flowering and fewer rosette leaves. Moreover, we observed that overexpression of LcSPL2 in A. thaliana up-regulated the expression levels of four genes related to flower development. Conclusions This study identified SPL genes in Liriodendron and characterized the function of LcSPL2 in advancing flower development.
前言 植物特异性 SQUAMOSA 启动子结合蛋白样(SPL)转录因子在叶片形态发生和无性到生殖期转变等各种发育过程中发挥着关键作用。Liriodendron chinense 和 Liriodendron tulipifera 因其郁金香般的花朵和奇特的叶片而被广泛用于园林绿化。然而,Liriodendron 的 SPL 基因家族尚未被鉴定和系统表征。方法 我们系统地鉴定和描述了鹅掌楸中的 SPLs 家族成员,包括系统发育、基因结构和同源分析。随后,我们通过 RT-qPCR 方法定量分析了 LcSPLs 在不同组织部位的表达模式,从而确定了目标基因 LcSPL2。最后,我们通过异位转化鉴定了 LcSPL2 的功能。结果 在 L. chinense 和 L. tulipifera 中分别发现了 17 个 LcSPL 基因和 18 个 LtSPL 基因。所有 35 个 SPL 基因被分为 9 个支系。两个物种都有三个 SPL 基因对产生于片段复制事件,而且 LcSPL 与 L. tulipifera 基因组显示出高度的共线性。RT-qPCR 分析表明,SPL 基因在不同组织中的表达存在差异,尤其是在 LcSPL2 和 LcSPL3 中。由于 LcSPL2 在雌蕊和叶片中高表达,因此我们选择它作为 L. chinense 的 SPL 基因家族的异位表达。我们发现,在拟南芥中过表达 LcSPL2 会导致提早开花和莲座叶减少。此外,我们还观察到,在拟南芥中过表达 LcSPL2 会上调与花发育相关的四个基因的表达水平。结论 本研究确定了 Liriodendron 中的 SPL 基因,并描述了 LcSPL2 在促进花发育方面的功能。
{"title":"Genome-wide investigation of SQUAMOSA PROMOTER BINDING PROTEIN-LIKE genes in Liriodendron and functional characterization of LcSPL2","authors":"Yu Zhang, Qinghua Hu, Xinyu Zhai, Zhonghua Tu, Jing Wang, Minxin Wang, Huogen Li","doi":"10.1093/aobpla/plae008","DOIUrl":"https://doi.org/10.1093/aobpla/plae008","url":null,"abstract":"Premise The plant-specific SQUAMOSA promoter-binding protein-like (SPL) transcription factors play a pivotal role in various developmental processes, including leaf morphogenesis and vegetative-to-reproductive phase transition. Liriodendron chinense and Liriodendron tulipifera are widely used in landscaping due to their tulip-like flowers and peculiar leaves. However, the SPL gene family in Liriodendron has not been identified and systematically characterized. Methods We systematically identified and characterized the SPLs family members in Liriodendron, including phylogeny, gene structure, syntenic analyses. Subsequently, we quantified the expression patterns of LcSPLs across various tissue sites through RT-qPCR assays, hence identified the target gene, LcSPL2. Finally, we characterized the functions of LcSPL2 via ectopic transformation. Results Altogether, 17 LcSPL and 18 LtSPL genes were genome-widely identified in L. chinense and L. tulipifera respectively. All the 35 SPLs were grouped into nine clades. Both species had three SPL gene pairs arising from segmental duplication events, and the LcSPLs displayed high collinearity with the L. tulipifera genome. RT-qPCR assays showed that SPL genes were differentially expressed in different tissues, especially. Because LcSPL2 is highly expressed in pistils and leaves, it was selected to describe the SPL gene family of L. chinense by ectopic expression. We showed that overexpression of LcSPL2 in Arabidopsis thaliana resulted in earlier flowering and fewer rosette leaves. Moreover, we observed that overexpression of LcSPL2 in A. thaliana up-regulated the expression levels of four genes related to flower development. Conclusions This study identified SPL genes in Liriodendron and characterized the function of LcSPL2 in advancing flower development.","PeriodicalId":48955,"journal":{"name":"AoB Plants","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2024-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139956852","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction to: Degeneration of oil bodies by rough endoplasmic reticulum (rER)-associated protein during seed germination in Cannabis sativa L. 更正:大麻(Cannabis sativa L.)种子萌发过程中粗面内质网(rER)相关蛋白导致的油体退化
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-12 eCollection Date: 2024-02-01 DOI: 10.1093/aobpla/plae006

[This corrects the article DOI: 10.1093/aobpla/plad082.].

[此处更正了文章 DOI:10.1093/aobpla/plad082]。
{"title":"Correction to: Degeneration of oil bodies by rough endoplasmic reticulum (rER)-associated protein during seed germination in <i>Cannabis sativa</i> L.","authors":"","doi":"10.1093/aobpla/plae006","DOIUrl":"https://doi.org/10.1093/aobpla/plae006","url":null,"abstract":"<p><p>[This corrects the article DOI: 10.1093/aobpla/plad082.].</p>","PeriodicalId":48955,"journal":{"name":"AoB Plants","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2024-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10860383/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139730801","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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