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The individualized optimal pillow height and neck support design for side sleepers. 针对侧睡者的个性化最佳枕头高度和颈部支撑设计。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-16 DOI: 10.1007/s11517-024-03204-x
Shan Tian, Chenghong Yao, Yawei Wang, Xuepeng Cao, Yike Sun, Lizhen Wang, Yubo Fan

An optimal pillow effectively increases sleep quality and prevents cervical symptoms. However, the influence of body dimension on optimal pillow design or selection strategy has not been clarified quantitatively. This study aims to investigate the individualized optimal pillow height and neck support for side sleepers. Nine healthy subjects were recruited and laid laterally on foam-latex pillow with four height levels (8 cm, 10 cm, 12 cm, 14 cm) and with/without neck support, respectively. Healthiness was evaluated using cervical spine morphology (measured by motion capturing system) and musculoskeletal internal force (simulated by a multi-body model). Comfortability was evaluated by a deviation standardized overall comfort rating. Individualized pillow height was identified by Hφ (calculated by the subject's shoulder width and absolute pillow height). Correlation analysis and linear mixed model were performed between C1-T1 slope and Hφ. A paired-t test was performed on the cervical curve and comfort score comparisons between neck support pillow and flat pillow. The C1-T1 slope of the cervical curve showed statistically significant correlation to Hφ and was well predicted by Hφ through linear relation (R2 = 0.80 for flat pillow, R2 = 0.82 for neck support pillow). The correlation between comfort score and Hφ was moderate or weak. Medium individualized height pillow (Hφ 9.74-11.76 cm) with neck support showed a cervical curve closest to natural standing and the lowest musculoskeletal internal force. Sub-low individualized height pillow (Hφ 11.76-13.78 cm) with neck support showed the highest average comfort score. For side sleepers, cervical curve morphology and optimal individualized pillow height are well predicted by Hφ. Comfortability perception is not sensitive to Hφ. Sub-low individualized height pillow showed the best comfortability and relatively good healthiness. Medium individualized height pillow with neck support showed the best healthiness.

最佳枕头能有效提高睡眠质量,预防颈椎病症状。然而,身体尺寸对最佳枕头设计或选择策略的影响尚未得到定量阐明。本研究旨在探讨侧睡者的个性化最佳枕头高度和颈部支撑。研究人员招募了九名健康受试者,让他们侧卧在四种高度(8 厘米、10 厘米、12 厘米、14 厘米)的泡沫乳胶枕上,并分别选择有/无颈部支撑的枕头。健康度通过颈椎形态(通过运动捕捉系统测量)和肌肉骨骼内力(通过多体模型模拟)进行评估。舒适度通过偏差标准化总体舒适度评级进行评估。个性化枕头高度由 Hφ(根据受试者肩宽和枕头绝对高度计算)确定。在 C1-T1 斜率和 Hφ 之间进行了相关分析和线性混合模型。对颈部支撑枕与平枕之间的颈椎曲线和舒适度评分比较进行了配对 t 检验。颈椎曲线的 C1-T1 斜率与 Hφ 呈显著的统计学相关性,并通过线性关系很好地预测了 Hφ (平枕的 R2 = 0.80,颈部支撑枕的 R2 = 0.82)。舒适度评分与 Hφ 之间的相关性为中等或较弱。带颈托的中等个性化高度枕头(Hφ 9.74-11.76 厘米)显示出最接近自然站立的颈椎曲线和最低的肌肉骨骼内力。带颈部支撑的次低个性化高度枕头(Hφ 11.76-13.78 厘米)的平均舒适度得分最高。对于侧睡者来说,颈椎曲线形态和最佳个性化枕头高度都能很好地预测 Hφ。舒适度感知对 Hφ 不敏感。次低个性化高度枕头显示出最佳的舒适性和相对较好的健康性。带颈部支撑的中等个性化高度枕头显示出最佳的健康性。
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引用次数: 0
EthoWatcher OS: improving the reproducibility and quality of categorical and morphologic/kinematic data from behavioral recordings in laboratory animals. EthoWatcher OS:提高实验室动物行为记录的分类和形态/运动学数据的可重复性和质量。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-14 DOI: 10.1007/s11517-024-03212-x
João Antônio Marcolan, José Marino-Neto

Behavioral recordings annotated by human observers (HOs) from video recordings are a fundamental component of preclinical animal behavioral models of neurobiological diseases. These models are often criticized for their vulnerability to reproducibility issues. Here, we present the EthoWatcher-Open Source (EW-OS), with tools and procedures for the use of blind-to-condition categorical transcriptions that are simultaneous with tracking, for the assessment of HOs intra- and interobserver reliability during training and data collection, for producing video clips of samples of behavioral categories that are useful for observer training. The use of these tools can inform and optimize the performance of observers, thus favoring the reproducibility of the data obtained. Categorical and machine vision-derived outputs are presented in an open data format for increased interoperability with other applications, where behavioral categories are associated frame-by-frame with tracking, morphological and kinematic attributes of an animal's image. The center of mass (X and Y pixel coordinates), the animal's area in square millimeters, the length and width in millimeters, and the angle in degrees were recorded. It also assesses the variation in each morphological descriptor to produce kinematic descriptors. While the initial measurements are in pixels, they are later converted to millimeters using the scale calibrated by the user via the graphical user interfaces. This process enables the creation of databases suitable for machine learning processing and behavioral pharmacology studies. EW-OS is constructed for continued collaborative development, available through an open-source platform, to support initiatives toward the adoption of good scientific practices in behavioral analysis, including tools for evaluating the quality of the data that can alleviate problems associated with low reproducibility in the behavioral sciences.

由人类观察者(HOs)通过视频记录进行注释的行为记录是神经生物学疾病临床前动物行为模型的基本组成部分。这些模型经常因其易受可重复性问题的影响而受到批评。在此,我们介绍 EthoWatcher-Open Source (EW-OS),其工具和程序包括:使用盲条件分类转录(与跟踪同步进行);在训练和数据收集过程中评估观察者内部和观察者之间的可靠性;制作用于观察者训练的行为类别样本视频剪辑。使用这些工具可以为观察者提供信息并优化其表现,从而提高所获数据的可重复性。分类输出和机器视觉输出以开放数据格式呈现,以提高与其他应用程序的互操作性,其中行为类别与动物图像的跟踪、形态和运动属性逐帧关联。质量中心(X 和 Y 像素坐标)、动物的面积(平方毫米)、长度和宽度(毫米)以及角度(度)都被记录下来。它还会评估每个形态描述符的变化,以生成运动描述符。虽然最初的测量值是以像素为单位的,但随后会通过图形用户界面,使用用户校准的刻度将其转换为毫米。通过这一过程,可以创建适用于机器学习处理和行为药理学研究的数据库。EW-OS 可通过开源平台进行持续合作开发,以支持在行为分析中采用良好的科学实践,包括用于评估数据质量的工具,从而缓解与行为科学中可重复性低有关的问题。
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引用次数: 0
Comparing on-line continuous movement decoding with joints unconstrained and constrained based on a generic musculoskeletal model. 基于通用肌肉骨骼模型,比较无约束和有约束关节的在线连续运动解码。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-14 DOI: 10.1007/s11517-024-03207-8
Lizhi Pan, Zhongyi Ding, Haifeng Zhao, Ruinan Mu, Jianmin Li

Human-machine interface (HMI) has been extensively developed and applied in rehabilitation. However, the performance of amputees on continuous movement decoding was significantly decreased compared with that of able-bodied individuals. To explore the impact of the absence of joint movements on the performance of HMI in rehabilitation, a generic musculoskeletal model (MM) was employed in this study to evaluate and compare the performance of subjects completing a series of on-line tasks with the wrist and metacarpophalangeal (MCP) joints unconstrained and constrained. The performance of the generic MM has been demonstrated in previous studies. The electromyography (EMG) signals of four muscles were employed as inputs of the generic MM to realize the continuous movement decoding of wrist and MCP joints. Ten able-bodied subjects were recruited to perform the on-line tasks. The completion time, the number of overshoots, and the path efficiency of the tasks were taken as the indexes to quantify the subjects' performance. The muscle activation associated with the movement was analyzed. Across all tasks and subjects, the average values of the three indexes with the joints unconstrained were 7.7 s, 0.59, and 0.38, respectively, while those with the joints constrained were 17.86 s, 1.47, and 0.22, respectively. The results demonstrated that the subjects performed better with the wrist and MCP joints unconstrained than with those joints constrained in the on-line tasks, suggesting that the absence of joint movements can be a reason of the decreased performance of continuous movement decoding with HMIs. Meanwhile, it is revealed that the different performance on motion behaviors is caused by the absence of joint movements.

人机界面(HMI)已在康复领域得到广泛开发和应用。然而,与健全人相比,截肢者在连续运动解码方面的表现明显下降。为了探索关节运动缺失对康复人机界面性能的影响,本研究采用了通用肌肉骨骼模型(MM)来评估和比较受试者在腕关节和掌指关节(MCP)无约束和受约束的情况下完成一系列在线任务的性能。通用 MM 的性能已在之前的研究中得到证实。通用 MM 采用四块肌肉的肌电图(EMG)信号作为输入,以实现腕关节和掌指关节的连续运动解码。研究人员招募了 10 名健全的受试者完成在线任务。任务的完成时间、过冲次数和路径效率作为量化受试者表现的指标。对与动作相关的肌肉激活进行了分析。在所有任务和受试者中,关节未受约束时,这三项指标的平均值分别为 7.7 秒、0.59 和 0.38,而关节受约束时,这三项指标的平均值分别为 17.86 秒、1.47 和 0.22。结果表明,在联机任务中,受试者在腕关节和 MCP 关节未受约束的情况下比关节受约束的情况下表现更好,这表明关节运动的缺失可能是人机界面连续运动解码性能下降的一个原因。同时,研究还揭示了运动行为上的不同表现是由关节运动的缺失造成的。
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引用次数: 0
Cancer-on-chip: a breakthrough organ-on-a-chip technology in cancer cell modeling. 片上癌症:用于癌细胞建模的突破性片上器官技术。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-14 DOI: 10.1007/s11517-024-03199-5
Babak Nejati, Reza Shahhosseini, Mobasher Hajiabbasi, Nastaran Safavi Ardabili, Kosar Bagtashi Baktash, Vahid Alivirdiloo, Sadegh Moradi, Mohammadreza Farhadi Rad, Fatemeh Rahimi, Marzieh Ramezani Farani, Farhood Ghazi, Ahmad Mobed, Iraj Alipourfard

Cancer remains one of the leading causes of death worldwide. The unclear molecular mechanisms and complex in vivo microenvironment of tumors make it difficult to clarify the nature of cancer and develop effective treatments. Therefore, the development of new methods to effectively treat cancer is urgently needed and of great importance. Organ-on-a-chip (OoC) systems could be the breakthrough technology sought by the pharmaceutical industry to address ever-increasing research and development costs. The past decade has seen significant advances in the spatial modeling of cancer therapeutics related to OoC technology, improving physiological exposition criteria. This article aims to summarize the latest achievements and research results of cancer cell treatment simulated in a 3D microenvironment using OoC technology. To this end, we will first discuss the OoC system in detail and then demonstrate the latest findings of the cancer cell treatment study by Ooc and how this technique can potentially optimize better modeling of the tumor. The prospects of OoC systems in the treatment of cancer cells and their advantages and limitations are also among the other points discussed in this study.

癌症仍然是导致全球死亡的主要原因之一。由于肿瘤的分子机制不明确,体内微环境复杂,因此很难弄清癌症的本质,也很难开发出有效的治疗方法。因此,开发有效治疗癌症的新方法迫在眉睫,意义重大。芯片上器官(OoC)系统可能是制药业为解决日益增长的研发成本而寻求的突破性技术。过去十年中,与 OoC 技术相关的癌症疗法空间建模取得了重大进展,改善了生理暴露标准。本文旨在总结利用 OoC 技术在三维微环境中模拟癌细胞治疗的最新成果和研究成果。为此,我们将首先详细讨论 OoC 系统,然后展示 Ooc 癌细胞治疗研究的最新成果,以及该技术如何潜在地优化更好的肿瘤建模。本研究还将讨论 OoC 系统在治疗癌细胞方面的前景及其优势和局限性。
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引用次数: 0
Digital transformation of mental health therapy by integrating digitalized cognitive behavioral therapy and eye movement desensitization and reprocessing. 通过整合数字化认知行为疗法和眼动脱敏与再处理疗法,实现心理健康疗法的数字化转型。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-14 DOI: 10.1007/s11517-024-03209-6
Ju-Yu Wu, Ying-Ying Tsai, Yu-Jie Chen, Fan-Chi Hsiao, Ching-Han Hsu, Yen-Feng Lin, Lun-De Liao

Digital therapy has gained popularity in the mental health field because of its convenience and accessibility. One major benefit of digital therapy is its ability to address therapist shortages. Posttraumatic stress disorder (PTSD) is a debilitating mental health condition that can develop after an individual experiences or witnesses a traumatic event. Digital therapy is an important resource for individuals with PTSD who may not have access to traditional in-person therapy. Cognitive behavioral therapy (CBT) and eye movement desensitization and reprocessing (EMDR) are two evidence-based psychotherapies that have shown efficacy in treating PTSD. This paper examines the mechanisms and clinical symptoms of PTSD as well as the principles and applications of CBT and EMDR. Additionally, the potential of digital therapy, including internet-based CBT, video conferencing-based therapy, and exposure therapy using augmented and virtual reality, is explored. This paper also discusses the engineering techniques employed in digital psychotherapy, such as emotion detection models and text analysis, for assessing patients' emotional states. Furthermore, it addresses the challenges faced in digital therapy, including regulatory issues, hardware limitations, privacy and security concerns, and effectiveness considerations. Overall, this paper provides a comprehensive overview of the current state of digital psychotherapy for PTSD treatment and highlights the opportunities and challenges in this rapidly evolving field.

数字疗法因其便利性和可及性在心理健康领域大受欢迎。数字疗法的一大优势是能够解决治疗师短缺的问题。创伤后应激障碍(PTSD)是一种使人衰弱的精神疾病,可在个人经历或目睹创伤事件后发生。对于可能无法获得传统面对面治疗的创伤后应激障碍患者来说,数字疗法是一种重要的资源。认知行为疗法(CBT)和眼动脱敏与再处理疗法(EMDR)是两种以证据为基础的心理疗法,对治疗创伤后应激障碍有一定疗效。本文探讨了创伤后应激障碍的机制和临床症状,以及 CBT 和 EMDR 的原理和应用。此外,本文还探讨了数字疗法的潜力,包括基于互联网的 CBT、基于视频会议的疗法以及使用增强和虚拟现实技术的暴露疗法。本文还讨论了数字心理疗法中采用的工程技术,如情绪检测模型和文本分析,以评估患者的情绪状态。此外,本文还讨论了数字疗法所面临的挑战,包括监管问题、硬件限制、隐私和安全问题以及有效性方面的考虑。总之,本文全面概述了创伤后应激障碍数字心理疗法的现状,并强调了这一快速发展领域的机遇和挑战。
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引用次数: 0
Ultra-short-term stress measurement using RGB camera-based remote photoplethysmography with reduced effects of Individual differences in heart rate. 使用基于 RGB 摄像头的远程照相血压计进行超短期压力测量,减少了心率个体差异的影响。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-11 DOI: 10.1007/s11517-024-03213-w
Seungkeon Lee, Young Do Song, Eui Chul Lee

Stress is linked to health problems, increasing the need for immediate monitoring. Traditional methods like electrocardiograms or contact photoplethysmography require device attachment, causing discomfort, and ultra-short-term stress measurement research remains inadequate. This paper proposes a method for ultra-short-term stress monitoring using remote photoplethysmography (rPPG). Previous predictions of ultra-short-term stress have typically used pulse rate variability (PRV) features derived from time-segmented heart rate data. However, PRV varies at the same stress levels depending on heart rates, necessitating a new method to account for these differences. This study addressed this by segmenting rPPG data based on normal-to-normal intervals (NNIs), converted from peak-to-peak intervals, to predict ultra-short-term stress indices. We used NNI counts corresponding to average durations of 10, 20, and 30 s (13, 26, and 39 NNIs) to extract PRV features, predicting the Baevsky stress index through regressors. The Extra Trees Regressor achieved R2 scores of 0.6699 for 13 NNIs, 0.8751 for 26 NNIs, and 0.9358 for 39 NNIs, surpassing the time-segmented approach, which yielded 0.4162, 0.6528, and 0.7943 for 10, 20, and 30-s intervals, respectively. These findings demonstrate that using NNI counts for ultra-short-term stress prediction improves accuracy by accounting for individual bio-signal variations.

压力与健康问题息息相关,因此更需要即时监测。传统方法,如心电图或接触式光电血压计,需要安装设备,会造成不适,而且超短期压力测量研究仍然不足。本文提出了一种利用远程光心动图(rPPG)进行超短期应激监测的方法。以往对超短期压力的预测通常使用从时间片段心率数据中得出的脉率变异性(PRV)特征。然而,在相同的压力水平下,PRV 会因心率的不同而变化,因此需要一种新的方法来解释这些差异。为了解决这个问题,本研究根据正常到正常间期(NNI)对 rPPG 数据进行分段,并从峰值到峰值间期进行转换,以预测超短期压力指数。我们使用与 10、20 和 30 秒(13、26 和 39 个 NNI)平均持续时间相对应的 NNI 计数提取 PRV 特征,并通过回归因子预测 Baevsky 压力指数。额外树回归器对 13 个 NNI 的 R2 得分为 0.6699,对 26 个 NNI 的 R2 得分为 0.8751,对 39 个 NNI 的 R2 得分为 0.9358,超过了时间分段方法,后者对 10、20 和 30 秒间隔的 R2 得分分别为 0.4162、0.6528 和 0.7943。这些研究结果表明,使用 NNI 计数进行超短期应激预测可通过考虑个体生物信号的变化来提高准确性。
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引用次数: 0
Integrated analysis of gene expressions and targeted mirnas for explaining crosstalk between oral and esophageal squamous cell carcinomas through an interpretable machine learning approach. 通过可解释的机器学习方法对基因表达和靶向镜像进行综合分析,以解释口腔鳞状细胞癌和食管鳞状细胞癌之间的串扰。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-10 DOI: 10.1007/s11517-024-03210-z
Khushi Yadav, Yasha Hasija

This study explores the bidirectional relation of esophageal squamous cell carcinoma (ESCC) and oral squamous cell carcinoma (OSCC), examining shared risk factors and underlying molecular mechanisms. By employing random forest (RF) classifier, enhanced with interpretable machine learning (IML) through SHapley Additive exPlanations (SHAP), we analyzed gene expression from two GEO datasets (GSE30784 and GSE44021). The GSE30784 dataset comprises 167 OSCC samples and 45 control group, whereas the GSE44021 dataset encompasses 113 ESCC samples and 113 control group. Our analysis led to identification of 20 key genes, such as XBP1, VGLL1, and RAD1, which are significantly associated with development of ESCC and OSCC. Further investigations were conducted using tools like NetworkAnalyst 3.0, Single Cell Portal, and miRNET 2.0, which highlighted complex interactions between these genes and specific miRNA targets including hsa-mir-124-3p and hsa-mir-1-3p. Our model achieved high precision in identifying genes linked to crucial processes like programmed cell death and cancer pathways, suggesting new avenues for diagnosis and treatment. This study confirms the bidirectional relationship between OSCC and ESCC, laying groundwork for targeted therapeutic approaches. This study helps to identify shared biological pathways and genetic factors of these conditions for designing personalized medicine strategies and to improve disease management.

本研究探讨了食管鳞状细胞癌(ESCC)和口腔鳞状细胞癌(OSCC)的双向关系,研究了共同的风险因素和潜在的分子机制。我们采用随机森林(RF)分类器,并通过SHAPLE Additive exPlanations(SHAP)增强可解释机器学习(IML),分析了两个GEO数据集(GSE30784和GSE44021)中的基因表达。GSE30784 数据集包括 167 个 OSCC 样本和 45 个对照组,而 GSE44021 数据集包括 113 个 ESCC 样本和 113 个对照组。通过分析,我们确定了 XBP1、VGLL1 和 RAD1 等 20 个关键基因,这些基因与 ESCC 和 OSCC 的发展显著相关。我们使用 NetworkAnalyst 3.0、Single Cell Portal 和 miRNET 2.0 等工具进行了进一步研究,结果发现这些基因与特定 miRNA 靶点(包括 hsa-mir-124-3p 和 hsa-mir-1-3p)之间存在复杂的相互作用。我们的模型能高精度识别与细胞程序性死亡和癌症通路等关键过程相关的基因,为诊断和治疗提供了新途径。这项研究证实了 OSCC 和 ESCC 之间的双向关系,为靶向治疗方法奠定了基础。这项研究有助于确定这些疾病的共同生物通路和遗传因素,从而设计个性化医疗策略,改善疾病管理。
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引用次数: 0
Generation of a virtual cohort of TAVI patients for in silico trials: a statistical shape and machine learning analysis. 生成用于硅学试验的 TAVI 患者虚拟队列:统计形状和机器学习分析。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-10 DOI: 10.1007/s11517-024-03215-8
Roberta Scuoppo, Salvatore Castelbuono, Stefano Cannata, Giovanni Gentile, Valentina Agnese, Diego Bellavia, Caterina Gandolfo, Salvatore Pasta

Purpose: In silico trials using computational modeling and simulations can complement clinical trials to improve the time-to-market of complex cardiovascular devices in humans. This study aims to investigate the significance of synthetic data in developing in silico trials for assessing the safety and efficacy of cardiovascular devices, focusing on bioprostheses designed for transcatheter aortic valve implantation (TAVI).

Methods: A statistical shape model (SSM) was employed to extract uncorrelated shape features from TAVI patients, enabling the augmentation of the original patient population into a clinically validated synthetic cohort. Machine learning techniques were utilized not only for risk stratification and classification but also for predicting the physiological variability within the original patient population.

Results: By randomly varying the statistical shape modes within a range of ± 2σ, a hundred virtual patients were generated, forming the synthetic cohort. Validation against the original patient population was conducted using morphological measurements. Support vector machine regression, based on selected shape modes (principal component scores), effectively predicted the peak pressure gradient across the stenosis (R-squared of 0.551 and RMSE of 11.67 mmHg). Multilayer perceptron neural network accurately predicted the optimal device size for implantation with high sensitivity and specificity (AUC = 0.98).

Conclusion: The study highlights the potential of integrating computational predictions, advanced machine learning techniques, and synthetic data generation to improve predictive accuracy and assess TAVI-related outcomes through in silico trials.

目的:利用计算建模和模拟进行的硅学试验可作为临床试验的补充,从而缩短复杂心血管设备在人体中的上市时间。本研究旨在调查合成数据在开发用于评估心血管设备安全性和有效性的硅学试验中的意义,重点是经导管主动脉瓣植入术(TAVI)设计的生物假体:方法:采用统计形状模型(SSM)从经导管主动脉瓣植入术患者中提取不相关的形状特征,从而将原始患者群体扩充为经过临床验证的合成队列。机器学习技术不仅用于风险分层和分类,还用于预测原始患者群体的生理变异性:结果:通过在± 2σ 范围内随机改变统计形状模式,生成了一百名虚拟患者,形成了合成队列。使用形态测量方法对原始患者群体进行了验证。基于所选形状模式(主成分得分)的支持向量机回归有效预测了狭窄处的峰值压力梯度(R 方为 0.551,RMSE 为 11.67 mmHg)。多层感知器神经网络准确预测了植入设备的最佳尺寸,具有很高的灵敏度和特异性(AUC = 0.98):该研究强调了将计算预测、先进的机器学习技术和合成数据生成整合在一起的潜力,以提高预测准确性,并通过硅学试验评估 TAVI 相关结果。
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引用次数: 0
Investigation of inert gas washout methods in a new numerical model based on an electrical analogy. 在基于电学类比的新数值模型中研究惰性气体冲洗方法。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-07 DOI: 10.1007/s11517-024-03200-1
Christoph Schmidt, Wasilios Hatziklitiu, Frederik Trinkmann, Giorgio Cattaneo, Johannes Port

Inert gas washout methods have been shown to detect pathological changes in the small airways that occur in the early stages of obstructive lung diseases such as asthma and COPD. Numerical lung models support the analysis of characteristic washout curves, but are limited in their ability to simulate the complexity of lung anatomy over an appropriate time period. Therefore, the interpretation of patient-specific washout data remains a challenge. A new numerical lung model is presented in which electrical components describe the anatomical and physiological characteristics of the lung as well as gas-specific properties. To verify that the model is able to reproduce characteristic washout curves, the phase 3 slopes (S3) of helium washouts are simulated using simple asymmetric lung anatomies consisting of two parallel connected lung units with volume ratios of 1.25 0.75 , 1.50 0.50 , and 1.75 0.25 and a total volume flow of 250 ml/s which are evaluated for asymmetries in both the convection- and diffusion-dominated zone of the lung. The results show that the model is able to reproduce the S3 for helium and thus the processes underlying the washout methods, so that electrical components can be used to model these methods. This approach could form the basis of a hardware-based real-time simulator.

惰性气体冲洗方法已被证明能检测出阻塞性肺病(如哮喘和慢性阻塞性肺病)早期小气道的病理变化。数值肺模型支持对特征性冲洗曲线的分析,但在模拟适当时间段内肺部解剖结构的复杂性方面能力有限。因此,解读特定患者的冲洗数据仍是一项挑战。本文介绍了一种新的肺部数值模型,其中的电子元件描述了肺部的解剖和生理特征以及气体特异性。为了验证该模型是否能再现特征性冲洗曲线,我们使用简单的非对称肺解剖结构模拟了氦气冲洗的第 3 阶段斜率(S3),该解剖结构由两个平行连接的肺单元组成,容积比分别为 1.25 0.75、1.50 0.50 和 1.75 0.25,总容积流量为 250 毫升/秒,对肺部对流和扩散主导区的非对称性进行了评估。结果表明,该模型能够再现氦气的 S3,从而再现冲洗方法的基本过程,因此可以使用电子元件对这些方法进行建模。这种方法可作为基于硬件的实时模拟器的基础。
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引用次数: 0
A cascaded FAS-UNet+ framework with iterative optimization strategy for segmentation of organs at risk. 采用迭代优化策略的级联 FAS-UNet+ 框架,用于分割风险器官。
IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-10-04 DOI: 10.1007/s11517-024-03208-7
Hui Zhu, Shi Shu, Jianping Zhang

Segmentation of organs at risks (OARs) in the thorax plays a critical role in radiation therapy for lung and esophageal cancer. Although automatic segmentation of OARs has been extensively studied, it remains challenging due to the varying sizes and shapes of organs, as well as the low contrast between the target and background. This paper proposes a cascaded FAS-UNet+ framework, which integrates convolutional neural networks and nonlinear multi-grid theory to solve a modified Mumford-shah model for segmenting OARs. This framework is equipped with an enhanced iteration block, a coarse-to-fine multiscale architecture, an iterative optimization strategy, and a model ensemble technique. The enhanced iteration block aims to extract multiscale features, while the cascade module is used to refine coarse segmentation predictions. The iterative optimization strategy improves the network parameters to avoid unfavorable local minima. An efficient data augmentation method is also developed to train the network, which significantly improves its performance. During the prediction stage, a weighted ensemble technique combines predictions from multiple models to refine the final segmentation. The proposed cascaded FAS-UNet+ framework was evaluated on the SegTHOR dataset, and the results demonstrate significant improvements in Dice score and Hausdorff Distance (HD). The Dice scores were 95.22%, 95.68%, and HD values were 0.1024, and 0.1194 for the segmentations of the aorta and heart in the official unlabeled dataset, respectively. Our code and trained models are available at https://github.com/zhuhui100/C-FASUNet-plus .

胸部危险器官(OAR)的分割在肺癌和食道癌的放射治疗中起着至关重要的作用。虽然对危险器官的自动分割已经进行了广泛研究,但由于器官的大小和形状各不相同,而且目标与背景之间的对比度较低,因此自动分割仍然具有挑战性。本文提出了一种级联 FAS-UNet+ 框架,该框架集成了卷积神经网络和非线性多网格理论,以求解用于分割 OARs 的修正 Mumford-shah 模型。该框架配备了增强型迭代块、从粗到细的多尺度架构、迭代优化策略和模型集合技术。增强迭代模块旨在提取多尺度特征,而级联模块则用于完善粗分割预测。迭代优化策略可改进网络参数,避免出现不利的局部极小值。此外,还开发了一种高效的数据增强方法来训练网络,从而显著提高了网络的性能。在预测阶段,加权集合技术结合了多个模型的预测结果,以完善最终的分割结果。在 SegTHOR 数据集上对所提出的级联 FAS-UNet+ 框架进行了评估,结果表明 Dice 分数和 Hausdorff Distance (HD) 均有显著提高。在官方无标记数据集中,主动脉和心脏的 Dice 分数分别为 95.22%、95.68%,HD 值分别为 0.1024 和 0.1194。我们的代码和训练好的模型可在 https://github.com/zhuhui100/C-FASUNet-plus 上获取。
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Medical & Biological Engineering & Computing
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