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Quaternary Environmental Changes Shaped Mitochondrial DNA Diversity in the Large Japanese Wood Mouse Apodemus speciosus in Hokkaido, Japan 第四纪环境变化对日本北海道大型木鼠Apodemus specious线粒体DNA多样性的影响
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-09-16 DOI: 10.3106/ms2021-0050
Yuta Inoue, Yutaro Suzuki, Kaori Hanazaki, Hitoshi Suzuki
Abstract. Quaternary environmental change provided opportunities for rapid population expansion; however, the process of building the population spatial structures remains poorly understood. In this study, we determined the mitochondrial cytochrome b and control region sequences of 43 individuals of the large Japanese wood mouse (Apodemus speciosus) from Hokkaido, northern Japan and analyzed these data along with those from 40 other individuals. Consistent with the findings of our previous study, we found that two rapid expansion events, after the last glacial maximum (LGM) and Marine Isotope Stage (MIS) 4, shaped population genetic pattern of A. speciosus in Hokkaido. In northeastern Hokkaido, several ancient lineages that originated during MIS 3 were detected, whereas central Hokkaido was dominated by haplotypes descended from a single lineage that survived the LGM, suggesting that the populations of western part of Hokkaido were newly formed by westward migration from eastern Hokkaido during the post-LGM warm period. Alternatively, as post-LGM vegetation recovery is thought to have occurred gradually from west to east in Hokkaido, population expansion started in the west and moved gradually to the east, resulting in eastward haplotype movement; thus, western and eastern Hokkaido may have served as the haplotype source and sink, respectively.
摘要第四纪环境变化为人口快速扩张提供了机会;然而,人们对构建人口空间结构的过程仍知之甚少。在这项研究中,我们测定了来自日本北部北海道的43只大型日本木鼠(Apodemus specious)个体的线粒体细胞色素b和控制区序列,并将这些数据与其他40只个体的数据一起进行了分析。与我们之前的研究结果一致,我们发现,在最后一次冰川盛期(LGM)和海洋同位素阶段(MIS)4之后,两次快速扩张事件塑造了北海道物种A.specious的种群遗传模式。在北海道东北部,发现了起源于MIS 3时期的几个古老谱系,而北海道中部则以从LGM中幸存下来的单个谱系的单倍型为主,这表明北海道西部的种群是在后LGM温暖期从北海道东部向西迁移而成的。或者,由于北海道LGM后植被恢复被认为是从西向东逐渐发生的,人口扩张从西部开始,并逐渐向东部移动,导致单倍型向东移动;因此,北海道西部和东部可能分别作为单倍型的来源和汇点。
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引用次数: 0
Roost Use of Operational Road Tunnels by Non-Cave Specialist Bats in a Subtropical Mountain Forest in Taiwan 台湾亚热带山地森林中非洞穴专家蝙蝠对可操作道路隧道的栖息利用
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-08-18 DOI: 10.3106/ms2020-0087
Joe Chun‐Chia Huang, Ya-Wen Yang, Heng-Chia Chang
Abstract. It is known that the development of roadway systems can benefit bats, particularly cave- and crevice-roosting species, by providing novel roosting resources, e.g., abandoned tunnels and underpasses. However, the usage of operational road tunnels by bats, and its pros and cons are often overlooked. In the present study, we investigated bat diversity in 18 road tunnels in a subtropical forested mountain in Taiwan from 2018 to 2019. A total of 139 insectivorous bat sightings were recorded from 13 tunnels and 76.3% of the samples were identified to 12 species. Surprisingly, 75% of the species were previously regarded as non-cave specialists. Bat occurrences show spatial, temporal, and taxonomic aggregations as around 90% of the observations were contributed by four morpho-species from five tunnels in the summer and fall seasons. The among-site variations in species composition can be explained by tunnel morphology and presence of operational streetlight by the entrances. Since roadkill and grounded individuals, particularly juvenile Pipistrellus, were often found during surveys, these tunnels may act as ecological traps rather than suitable roosts to bats. Future confirmation of the roles of these tunnels to bats is necessary by measuring fitness through behavioral observations and long-term monitoring.
摘要众所周知,道路系统的发展可以提供新的栖息资源,例如废弃的隧道和地下通道,从而使蝙蝠受益,特别是栖息在洞穴和裂缝中的蝙蝠。然而,蝙蝠对公路隧道的使用及其利弊往往被忽视。本研究于2018 - 2019年对台湾亚热带森林山区18条公路隧道的蝙蝠多样性进行了调查。13条隧道共捕获食虫蝙蝠139只,其中12种占76.3%。令人惊讶的是,75%的物种以前被认为不是洞穴专家。蝙蝠的出现表现出空间、时间和分类上的聚集性,约90%的观测结果是由夏季和秋季来自5个隧道的4种形态物种贡献的。物种组成在站点间的变化可以通过隧道形态和入口处的运行路灯来解释。由于在调查过程中经常发现被公路撞死的蝙蝠和搁浅的蝙蝠个体,尤其是Pipistrellus的幼崽,这些隧道可能是生态陷阱,而不是蝙蝠的适宜栖息地。未来确认这些隧道对蝙蝠的作用是必要的,通过行为观察和长期监测来测量适应性。
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引用次数: 0
MAMMAL STUDY EDITORIAL OFFICE 哺乳动物研究编辑部
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-07-25 DOI: 10.3106/1343-4152-47.3.1
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引用次数: 0
First Record of the Black-Bearded Tomb Bat Taphozous melanopogon Temminck, 1841 (Chiroptera: Emballonuridae) from Japan 日本黑须墓蝠首次记录,1841年(翼翅目:蠓科)
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-06-27 DOI: 10.3106/ms2022-0007
S. Kobayashi, Kishio Maeda, Hisao Tamura, M. Izawa
Abstract. A bat was rescued from Okinawajima Island, Ryukyu Archipelago, Japan in November 2021. Observing the external characteristics, we identified it as the black-bearded tomb bat, Taphozous melanopogon Temminck, 1841, which is mainly distributed in tropical Asia. To our knowledge, this is the first record of this species in Japan. However, we infer that it was accidentally only visiting and not established on Okinawajima Island.
摘要2021年11月,一只蝙蝠在日本琉球群岛冲绳岛获救。外部特征鉴定为黑须墓蝠,Taphozous melanopogon Temminck, 1841,主要分布于亚洲热带地区。据我们所知,这是该物种在日本的首次记录。然而,我们推断它只是偶然来访,而不是在冲绳岛上定居。
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引用次数: 0
The Genetic Diversity and Structure of the Feral Raccoon (Procyon lotor) Population in Shikoku Island, Japan 日本四国岛野生浣熊种群的遗传多样性和结构
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-06-09 DOI: 10.3106/ms2021-0052
T. Yamashiro, Y. Kaneshiro, A. Yamashiro, M. Maki
Abstract. We explored the genetic diversity and population genetic structure of an invasive alien species, the raccoon Procyon lotor, which was introduced into the Shikoku Island of Japan, using sequences of the mitochondrial control region and 10 polymorphic microsatellite loci. In 80 individuals examined, we detected two genetically divergent haplotypes, indicating that two maternal lineages had been introduced into Shikoku Island. Population clustering analysis suggested the nonexistence of genetic structure in the area. The relatedness network showed that the raccoon population in Shikoku Island consisted of closely related individuals. The genetic diversity of the Shikoku raccoon population was lower than that in the native range. These results and a prior report indicate that the Shikoku raccoon population is likely to have expanded from small numbers of founders originating from an initial invasive population. Raccoon captures outside Kagawa are decreasing, although past expansions into Tokushima and Ehime suggest that there are no geographical barriers among these areas. Therefore, action should be taken to prevent any re-expansion of the raccoon population in Kagawa. Intensive monitoring and the elimination of dispersers from Kagawa, as well as effort to eradicate potential source populations for expansion in Kagawa, are needed.
摘要利用线粒体控制区序列和10个多态性微卫星位点,研究了引进日本四国岛的外来入侵物种——原种浣熊的遗传多样性和种群遗传结构。在80个被检查的个体中,我们检测到两个基因上不同的单倍型,这表明两个母系已经被引入四国岛。群体聚类分析表明该地区不存在遗传结构。亲缘关系网络表明,四国岛的浣熊种群由亲缘关系密切的个体组成。四国浣熊种群的遗传多样性低于本地区。这些结果和之前的一份报告表明,四国浣熊的种群很可能是由最初入侵种群的少量创始者扩大而来的。香川县以外的浣熊捕获量正在减少,尽管过去在德岛和爱媛县的扩张表明这些地区之间没有地理障碍。因此,应该采取行动,防止香川的浣熊种群再次扩大。需要加强监测和消除香川的分散者,并努力消除香川扩张的潜在来源人群。
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引用次数: 0
Body Temperature Measurement Reveals the Reproductive Profile of Female Apodemus speciosus under Laboratory and Field Conditions 体温测量揭示了实验室和野外条件下雌性Apodemus specious的繁殖特征
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-05-19 DOI: 10.3106/ms2021-0048
Akira Kuroyanagi, Rina Ukyo, Yoshinobu Kodama, Takeshi Eto, Yoshinobu Okubo, I. Kobayashi, S. Ieiri, Tetsuo Morita, Shinsuke H. Sakamoto
Abstract. This study illustrated body temperature (Tb) fluctuation during reproduction and discussed the effectiveness of measuring Tb for predicting the reproductive profile of female Apodemus speciosus both under laboratory and field conditions. Tb fluctuation was monitored for four breeding events in the laboratory and for three in the field. Individual variation in Tb fluctuation during reproduction was larger in the field than in the laboratory, while its temporal pattern was clearer in the field than in the laboratory. Tb fluctuating patterns according to the progress of the reproductive stage were similar between the laboratory and the field. Daily mean Tb increased after the start of pregnancy, decreased during late pregnancy, rapidly increased after parturition, and remained higher through the lactation period. In particular, the following three characteristics should be apparent indices of parturition: increase of daily mean Tb and daily minimum Tb in early pregnancy, decrease of daily max Tb and daily mean Tb in late pregnancy, and increase of daily max Tb at the day of parturition. These results indicate that implanting small-sized loggers enables us to obtain a representative pattern of Tb fluctuation and to predict the reproductive profile of female A. speciosus, both under laboratory and field conditions.
摘要本研究说明了繁殖过程中的体温(Tb)波动,并讨论了在实验室和野外条件下测量Tb预测雌性Apodemus specious繁殖特征的有效性。在实验室中监测了四次繁殖事件和三次野外繁殖事件的Tb波动。繁殖过程中Tb波动的个体差异在野外比在实验室更大,而其时间模式在野外比实验室更清晰。Tb随生殖阶段进展的波动模式在实验室和现场之间是相似的。日平均Tb在妊娠开始后增加,在妊娠晚期下降,分娩后迅速增加,并在整个哺乳期保持较高水平。特别是,以下三个特征应该是分娩的明显指标:妊娠早期的日平均Tb和日最小Tb增加,妊娠晚期的日最大Tb和每日平均Tb减少,以及分娩当天的每日最大Tb增加。这些结果表明,在实验室和野外条件下,种植小型记录器使我们能够获得Tb波动的代表性模式,并预测雌性物种a.specious的繁殖特征。
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引用次数: 0
Diet Composition and Prey Preference of Tiger, Leopard, and Dhole in Kalakkad-Mundanthurai Tiger Reserve, Southern Western Ghats, India 印度西高止山脉南部Kalakkad Mundanthurai老虎保护区虎、豹和Dhole的饮食组成和猎物偏好
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-05-02 DOI: 10.3106/ms2020-0058
B. Krishnakumar, R. Nagarajan, K. Selvan
Abstract. Comprehensive information on prey availability and diet composition is important to formulate effective conservation strategies. Data on these of large apex predators, the tiger Panthera tigris, leopard Panthera pardus, and dhole Cuon alpinus, are deficient in Kalakkad-Mundanthurai Tiger Reserve, India, which harbors low prey density. Therefore, we investigated how these predators coexisted by partitioning limited food resources. We found that prey selection and activity patterns differed among predators. The leopard (D [Jacobs' preference index] = +0.916) and dhole (D = +0.937) preferred the Indian chevrotain Moschiola indica, whereas the tiger preferred the gaur Bos gaurus (D = +0.937). Biomass of tiger's diet mainly consisted of the gaur (75%). In the dhole, the Indian chevrotain and sambar Rusa unicolor together contributed 91% of biomass, whereas 79% of leopard's biomass was contributed by the Nilgiri langur Semnopithecus johnii and the Indian chevrotain. The leopard and dhole had the highest dietary overlap (Ojk [Pianka Index] = 0.46). The highest activity overlap was found among the leopard, Indian chevrotain, and sambar. The leopard and dhole would compete for the Indian chevrotain, although the competition may be avoided by different activity patterns. Managements of the Indian chevrotain and gaur are critical for conserving large predators in the region.
摘要关于猎物可获得性和饮食组成的全面信息对于制定有效的保护策略至关重要。在猎物密度较低的印度Kalakkad Mundanthurai老虎保护区,大型顶级捕食者虎Panthera tigris、豹Panthera pardus和单桅帆船Cuon alpinus的数据不足。因此,我们研究了这些捕食者是如何通过分配有限的食物资源而共存的。我们发现捕食者对猎物的选择和活动模式各不相同。豹子(D[Jacobs偏好指数]=+0.916)和单桅帆船(D=+0.937)更喜欢印度山鸡(chevrotain Moschiola indica),而老虎更喜欢高耳Bos gaurus(D=+0.937)。老虎的日粮生物量主要由高耳组成(75%)。在单桅帆船中,印度的切夫罗坦和桑巴鲁萨单色共同贡献了91%的生物量,而豹子79%的生物量由Nilgiri叶猴Semnopithecus johnii和印度的切夫罗坦贡献。豹子和三角帆船的饮食重叠程度最高(Ojk[Pianka指数]=0.46)。豹子、印度雪花莲和桑巴的活动重叠程度最高。豹子和单桅帆船将争夺印度雪佛兰,尽管不同的活动模式可能会避免这种竞争。印度雪夫罗坦和高尔的管理对于保护该地区的大型捕食者至关重要。
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引用次数: 4
First Record of Lineage IV of Rattus tanezumi (Rodentia: Muridae) from the southern Ryukyus, Japan 日本琉球南部tanezumi鼠(啮齿目:鼠科)世系IV首录
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-05-02 DOI: 10.3106/ms2022-0001
M. Motokawa, Tomohisa Makino, Takashi O. Yato, S. Okabe, Tsunehiro Shiroma, M. Toyama, H. Ota
Abstract. Based on mitochondrial cytochrome b gene sequences, we report representatives of the Lineage IV of Rattus tanezumi (Rodentia: Muridae) from Miyakojima, Taramajima, and Yonagunijima Islands in the southern Ryukyus as the first record of the lineage from Japan. The new record of Lineage IV provides an addition to the mammal fauna of Japan essentially at the species level. Accordingly, the genus Rattus in Japan consists of five species: R. rattus, Lineage II of R. tanezumi, Lineage IV of R. tanezumi, R. norvegicus, and R. exulans. The Miyakojima–Taramajima and Yonagunijima samples of the Lineage IV had discernible genetic differences, suggesting different origins. From Miyakojima Island and Kojima Island (an islet close to Miyakojima Island). We also found Lineage II of R. tanezumi, indicating that the two lineages coexist on Miyakojima Island. Morphological comparisons of these Lineage IV and Lineage II specimens suggest a greater molar length in Lineage IV than in Lineage II, and differences in the foramen magnum shape. Future detailed studies on genetic structures, morphological characteristics, and distribution of Lineage IV and Lineage II rats in the southern Ryukyus are needed to clarify their evolutionary history.
摘要基于线粒体细胞色素b基因序列,我们报道了来自琉球南部宫古岛、Taramajima岛和Yonagunijima岛的tanezumi家鼠(啮齿目:鼠科)谱系IV的代表,作为来自日本的第一个谱系记录。谱系IV的新记录基本上在物种水平上为日本哺乳动物动物群提供了一个补充。据此,日本的家鼠属包括5种:家鼠、黄斑家鼠ⅱ系、黄斑家鼠ⅳ系、褐家鼠和黄斑家鼠。世系IV的宫古岛-荒岛和Yonagunijima样本有明显的遗传差异,表明不同的起源。从宫古岛和小岛(靠近宫古岛的一个小岛)。此外,我们还发现了tanezumi的世系II,表明这两个世系在宫古岛上共存。对谱系IV和谱系II标本的形态学比较表明,谱系IV的磨牙长度大于谱系II的磨牙长度,并且在大孔形状上存在差异。未来需要对琉球南部世系IV和世系II大鼠的遗传结构、形态特征和分布进行详细的研究,以阐明它们的进化史。
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引用次数: 1
Cats were Responsible for the Headless Carcasses of Shearwaters: Evidence from Genetic Predator Identification 猫对海鸥的无头尸体负有责任:来自基因捕食者识别的证据
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-04-20 DOI: 10.3106/ms2021-0047
J. Nagata, Atsushi Haga, Y. Kusachi, Mikuni Tokuyoshi, H. Endo, Y. Watari
Abstract. The domestic cat Felis silvestris catus is known to be one of the most notorious invasive alien predators. Seabirds are typical taxonomic groups that have been impacted by free-ranging cats on islands, and their headless carcasses are frequently observed. We conducted genetic predator identification of the carcasses of streaked shearwater Calonectris leucomelas and described their characteristics on Mikura Island, Japan, where free-ranging cats were blamed for the recent rapid decline of the shearwater population. Eight carcasses of streaked shearwaters were found in the survey. Genetic analysis of swab samples from scarred tissues of the carcasses detected cat DNA and identified cat predation on six out of eight carcasses. All six cat-positive carcasses were headless or almost headless with the head and body faintly connected by esophagus and trachea, several of which were missing their intestines. We describe the conditions of these headless carcasses, noting the main characteristics that could lead to suspicion of cat predation. To the best of our knowledge, this is the first genetic predator identification using seabirds, and may make more stakeholders aware of the reality of cat predation worldwide. On Mikura Island, we expect that this evidence will contribute to the development of systematic cat management. Abstract in Japanese (要旨). オオミズナギドリの首なし死骸はネコの捕食によるものだった:遺伝学的捕 食者検出によるエビデンス.イエネコ Felis silvestris catus は,最も有名な侵略的外来捕食者の一つとして知 られている.海鳥は,島嶼においてイエネコの影響を受けてきた典型的な分類群であり,首のない死骸が頻 繁に観察されることがある.本研究では,御蔵島において,イエネコによって近年個体数が減少していると 言われているオオミズナギドリ Calonectris leucomelas の死骸を対象に,遺伝的捕食者検出を行い,さらに死 骸の特徴を明らかにした.今回の調査では,オオミズナギドリの死骸を 8 個体分発見した.死骸の傷口から 採取したスワブサンプルの遺伝子分析により,8 つの死骸のうち 6 つでイエネコの DNA が検出され,イエ ネコの捕食が確認された.これら 6 つの死骸はすべて頭がないか,頭がかろうじて食道や器官で胴体部とつ ながったほぼ首なしという状態で,そのうちのいくつかは消化管も消失していた.本研究では,この首なし という死骸の状態について,イエネコの捕食を疑うことができる主な特徴として提示する.我々の知る限り, 本研究は海鳥を対象とした初めての遺伝的捕食者検出の事例であり,これにより世界的なイエネコの捕食の 実態が,より多くの関係者に認識されるようになるであろう.さらに,この遺伝学的エビデンスが御蔵島に おける本格的なイエネコ対策の展開に貢献することも期待される
摘要家猫(Felis silvestris catus)被认为是最臭名昭著的外来入侵掠食者之一。海鸟是典型的分类群体,受到岛上自由放养的猫的影响,它们的无头尸体经常被观察到。我们对斑纹鹱的尸体进行了遗传捕食者鉴定,并描述了它们在日本三仓岛的特征,在那里,自由放养的猫被指责是最近海鸥数量迅速下降的原因。在调查中发现了8具斑纹鹱的尸体。对尸体疤痕组织的拭子样本进行遗传分析,发现了猫的DNA,并在8具尸体中发现了6具猫的捕食。所有6具猫阳性尸体都是无头或几乎无头,头部和身体通过食道和气管微弱地连接,其中几具没有肠。我们描述了这些无头尸体的情况,注意到可能导致怀疑被猫捕食的主要特征。据我们所知,这是第一次利用海鸟进行基因捕食者鉴定,可能会让更多的利益相关者意识到全球范围内猫捕食的现实。在Mikura岛,我们期望这一证据将有助于系统猫管理的发展。日文摘要(英文)。。イエネコ猫属silvestri卡图斯は,最も有名な侵略的外来捕食者の一つとして知られている。海鳥は,島嶼においてイエネコの影響を受けてきた典型的な分類群であり,首のない死骸が頻繁に観察されることがある。本研究では,御蔵島において,イエネコによって近年個体数が減少していると言われているオオミズナギドリCalonectris leucomelasの死骸を対象に,遺伝的捕食者検出を行い,さらに死骸の特徴を明らかにした。【中文翻译】,。死骸の傷口から採取したスワブサンプルの遺伝子分析により,8つの死骸のうち6つでイエネコのDNAが検出され,イエネコの捕食が確認された。これら6つの死骸はすべて頭がないか,頭がかろうじて食道や器官で胴体部とつながったほぼ首なしという状態で,そのうちのいくつかは消化管も消失していた。本研究では,この首なしという死骸の状態について,イエネコの捕食を疑うことができる主な特徴として提示する。我々の知る限り,本研究は海鳥を対象とした初めての遺伝的捕食者検出の事例であり,これにより世界的なイエネコの捕食の実態が,より多くの関係者に認識されるようになるであろう。さらに,この遺伝学的エビデンスが御蔵島における本格的なイエネコ対策の展開に貢献することも期待される
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引用次数: 3
Trends in Habitat Use between Sympatric Sika Deer and Japanese Serow as Revealed by Camera Traps 相机陷阱揭示的同域梅花鹿与日本雪鹿栖息地利用趋势
IF 1 4区 生物学 Q3 ZOOLOGY Pub Date : 2022-04-20 DOI: 10.3106/ms2021-0012
Satsuki Nakamori, M. Ando
Abstract. In response to severe vegetation degradation caused by sika deer in Japan, it is important to understand the habitat use trends of the sika deer and sympatric Japanese serows to promote the management and conservation of both species and their habitats. This study used camera traps to examine the trends of habitat use of the two sympatric ungulates in the Kuraiyama Experimental Forest (KEF) at Gifu University. We set camera traps at 20 sites and evaluated the number of individuals photographed for three years. Additionally, we surveyed several environmental factors around the camera trap sites to determine the relationship between species prevalence and habitat features. Both species were photographed at all sites, and some habitat use trends were observed. The deer used the west side of the valley, whereas the serows used the east, with clearer trends further observed in summer. Both ungulates avoided snow cover in winter and used steeper slopes and ridges in several seasons. With the current increase in the deer population, niche overlap between the two species may occur in the common place preferred by both species; therefore, careful monitoring of their relationships and their changes should be continued in the future.
摘要为了应对日本梅花鹿造成的严重植被退化,了解梅花鹿和同病日本血清的栖息地使用趋势,以促进对这两个物种及其栖息地的管理和保护,这一点很重要。这项研究使用相机捕捉器来检查岐阜大学Kuraiyama实验林(KEF)中两种同域有蹄类动物栖息地使用的趋势。我们在20个地点设置了相机陷阱,并评估了三年来拍摄的个人数量。此外,我们调查了相机捕捉点周围的几个环境因素,以确定物种流行率和栖息地特征之间的关系。这两个物种都在所有地点拍摄了照片,并观察到了一些栖息地的使用趋势。鹿使用山谷的西侧,而serows使用山谷的东侧,在夏季进一步观察到更清晰的趋势。这两种有蹄类动物在冬天都避开了积雪,并在几个季节使用了更陡的斜坡和山脊。随着目前鹿种群的增加,两个物种之间的生态位重叠可能发生在两个物种都喜欢的共同位置;因此,今后应继续仔细监测它们之间的关系及其变化。
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引用次数: 0
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Mammal Study
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