Journal of Machine Learning Research最新文献

We consider joint estimation of multiple graphical models arising from heterogeneous and high-dimensional observations. Unlike most previous approaches which assume that the cluster structure is given in advance, an appealing feature of our method is to learn cluster structure while estimating heterogeneous graphical models. This is achieved via a high dimensional version of Expectation Conditional Maximization (ECM) algorithm (Meng and Rubin, 1993). A joint graphical lasso penalty is imposed on the conditional maximization step to extract both homogeneity and heterogeneity components across all clusters. Our algorithm is computationally efficient due to fast sparse learning routines and can be implemented without unsupervised learning knowledge. The superior performance of our method is demonstrated by extensive experiments and its application to a Glioblastoma cancer dataset reveals some new insights in understanding the Glioblastoma cancer. In theory, a non-asymptotic error bound is established for the output directly from our high dimensional ECM algorithm, and it consists of two quantities: statistical error (statistical accuracy) and optimization error (computational complexity). Such a result gives a theoretical guideline in terminating our ECM iterations.

We present a Distributionally Robust Optimization (DRO) approach to estimate a robustified regression plane in a linear regression setting, when the observed samples are potentially contaminated with adversarially corrupted outliers. Our approach mitigates the impact of outliers by hedging against a family of probability distributions on the observed data, some of which assign very low probabilities to the outliers. The set of distributions under consideration are close to the empirical distribution in the sense of the Wasserstein metric. We show that this DRO formulation can be relaxed to a convex optimization problem which encompasses a class of models. By selecting proper norm spaces for the Wasserstein metric, we are able to recover several commonly used regularized regression models. We provide new insights into the regularization term and give guidance on the selection of the regularization coefficient from the standpoint of a confidence region. We establish two types of performance guarantees for the solution to our formulation under mild conditions. One is related to its out-of-sample behavior (prediction bias), and the other concerns the discrepancy between the estimated and true regression planes (estimation bias). Extensive numerical results demonstrate the superiority of our approach to a host of regression models, in terms of the prediction and estimation accuracies. We also consider the application of our robust learning procedure to outlier detection, and show that our approach achieves a much higher AUC (Area Under the ROC Curve) than M-estimation (Huber, 1964, 1973).

Many applications in speech, robotics, finance, and biology deal with sequential data, where ordering matters and recurrent structures are common. However, this structure cannot be easily captured by standard kernel functions. To model such structure, we propose expressive closed-form kernel functions for Gaussian processes. The resulting model, GP-LSTM, fully encapsulates the inductive biases of long short-term memory (LSTM) recurrent networks, while retaining the non-parametric probabilistic advantages of Gaussian processes. We learn the properties of the proposed kernels by optimizing the Gaussian process marginal likelihood using a new provably convergent semi-stochastic gradient procedure, and exploit the structure of these kernels for scalable training and prediction. This approach provides a practical representation for Bayesian LSTMs. We demonstrate state-of-the-art performance on several benchmarks, and thoroughly investigate a consequential autonomous driving application, where the predictive uncertainties provided by GP-LSTM are uniquely valuable.

Multilayer networks are a useful way to capture and model multiple, binary or weighted relationships among a fixed group of objects. While community detection has proven to be a useful exploratory technique for the analysis of single-layer networks, the development of community detection methods for multilayer networks is still in its infancy. We propose and investigate a procedure, called Multilayer Extraction, that identifies densely connected vertex-layer sets in multilayer networks. Multilayer Extraction makes use of a significance based score that quantifies the connectivity of an observed vertex-layer set through comparison with a fixed degree random graph model. Multilayer Extraction directly handles networks with heterogeneous layers where community structure may be different from layer to layer. The procedure can capture overlapping communities, as well as background vertex-layer pairs that do not belong to any community. We establish consistency of the vertex-layer set optimizer of our proposed multilayer score under the multilayer stochastic block model. We investigate the performance of Multilayer Extraction on three applications and a test bed of simulations. Our theoretical and numerical evaluations suggest that Multilayer Extraction is an effective exploratory tool for analyzing complex multilayer networks. Publicly available code is available at https://github.com/jdwilson4/MultilayerExtraction.

SnapVX is a high-performance solver for convex optimization problems defined on networks. For problems of this form, SnapVX provides a fast and scalable solution with guaranteed global convergence. It combines the capabilities of two open source software packages: Snap.py and CVXPY. Snap.py is a large scale graph processing library, and CVXPY provides a general modeling framework for small-scale subproblems. SnapVX offers a customizable yet easy-to-use Python interface with "out-of-the-box" functionality. Based on the Alternating Direction Method of Multipliers (ADMM), it is able to efficiently store, analyze, parallelize, and solve large optimization problems from a variety of different applications. Documentation, examples, and more can be found on the SnapVX website at http://snap.stanford.edu/snapvx.