Pub Date : 2024-11-12DOI: 10.1016/j.jinf.2024.106350
Tiphaine Arlabosse, Alexandra Y Kreins, Philip Ancliff, Rossa Brugha, Iek Leng Cheng, Robert Chiesa, Bairavi Indrakumar, Winnie Ip, Amy I Jacobs, Giovanna Lucchini, Stephen Marks, Elizabeth Rivers, Helen Spencer, Austen Worth, Seilesh Kadambari, Judith Breuer
{"title":"Combination therapy of favipiravir and nitazoxanide to treat respiratory viral infections in severe T-cell deficient children: a single center experience.","authors":"Tiphaine Arlabosse, Alexandra Y Kreins, Philip Ancliff, Rossa Brugha, Iek Leng Cheng, Robert Chiesa, Bairavi Indrakumar, Winnie Ip, Amy I Jacobs, Giovanna Lucchini, Stephen Marks, Elizabeth Rivers, Helen Spencer, Austen Worth, Seilesh Kadambari, Judith Breuer","doi":"10.1016/j.jinf.2024.106350","DOIUrl":"https://doi.org/10.1016/j.jinf.2024.106350","url":null,"abstract":"","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106350"},"PeriodicalIF":14.3,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631759","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-11DOI: 10.1016/j.jinf.2024.106328
Clare Thakker, Clare Warrell, Jessica Barrett, Helen L Booth, Peter L Chiodini, Sylviane Defres, Jane Falconer, Nathan Jacobs, Jayne Jones, Jonathan Lambert, Clare Leong, Angela McBride, Elinor Moore, Tara Moshiri, Laura E Nabarro, Geraldine O'Hara, Neil Stone, Clare van Halsema, Anna M Checkley
Eosinophilia is a common finding in returning travellers, migrants and other travelling groups. In this setting it often indicates an underlying helminth infection. Infections associated with eosinophilia are frequently either asymptomatic or associated with non-specific symptoms but some can cause severe disease. Here the British Infection Association guidelines group has comprehensively reviewed and updated the UK recommendations for the investigation and management of eosinophilia in returning travellers, migrants and other relevant groups, first published in 2010.1 Literature reviews have been undertaken to update the evidence on the prevalence and causes of eosinophilia in these groups and on the treatment of relevant pathogens and clinical conditions. Diagnostic tests available to UK-based clinicians are summarised. Changes made to the updated guidelines include in sections on the investigation and empirical treatment of asymptomatic eosinophilia and on the treatment of trichuriasis, lymphatic filariasis, onchocerciasis, hookworm, fascioliasis, taeniasis. Pathogens which are rarely encountered in UK practice have been removed from the guidelines and others added, including an expanded section on fungal infection. A section on off-license and rarely used drugs has been included.
{"title":"UK guidelines for the investigation and management of eosinophilia in returning travellers and migrants.","authors":"Clare Thakker, Clare Warrell, Jessica Barrett, Helen L Booth, Peter L Chiodini, Sylviane Defres, Jane Falconer, Nathan Jacobs, Jayne Jones, Jonathan Lambert, Clare Leong, Angela McBride, Elinor Moore, Tara Moshiri, Laura E Nabarro, Geraldine O'Hara, Neil Stone, Clare van Halsema, Anna M Checkley","doi":"10.1016/j.jinf.2024.106328","DOIUrl":"https://doi.org/10.1016/j.jinf.2024.106328","url":null,"abstract":"<p><p>Eosinophilia is a common finding in returning travellers, migrants and other travelling groups. In this setting it often indicates an underlying helminth infection. Infections associated with eosinophilia are frequently either asymptomatic or associated with non-specific symptoms but some can cause severe disease. Here the British Infection Association guidelines group has comprehensively reviewed and updated the UK recommendations for the investigation and management of eosinophilia in returning travellers, migrants and other relevant groups, first published in 2010.<sup>1</sup> Literature reviews have been undertaken to update the evidence on the prevalence and causes of eosinophilia in these groups and on the treatment of relevant pathogens and clinical conditions. Diagnostic tests available to UK-based clinicians are summarised. Changes made to the updated guidelines include in sections on the investigation and empirical treatment of asymptomatic eosinophilia and on the treatment of trichuriasis, lymphatic filariasis, onchocerciasis, hookworm, fascioliasis, taeniasis. Pathogens which are rarely encountered in UK practice have been removed from the guidelines and others added, including an expanded section on fungal infection. A section on off-license and rarely used drugs has been included.</p>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106328"},"PeriodicalIF":14.3,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-11DOI: 10.1016/j.jinf.2024.106349
Alessandra Teixeira de Macedo, Daniel Wagner de Castro Lima Santos, Bram Spruijtenburg, Dayse Azevedo Coelho de Souza, Leila Ferreira Moreira Dos Santos Barbos, Sirlei Garcia Marques, Julliana Ribeiro Alves Dos Santos, Eelco F J Meijer, Theun de Groot, Conceição de Maria Pedrozo E Silva de Azevedo, Jacques F Meis
Objective: To describe an outbreak due to Candida vulturna, a newly emerging Candida species belonging to the Candida haemulonii species complex in the Metschnikowiaceae family.
Methods: In this retrospective cohort study we genotyped 14C. vulturna bloodstream isolates, occurring in a 4-month-period in paediatric cancer patients in a Brazilian hospital. To prove an outbreak, ITS sequence analysis and whole genome sequencing (WGS) was done. Antifungal susceptibility was performed with the reference CLSI method and the commercial Sensititre YeastOne (SYO) YO10 plates. A control C. vulturna isolate from another region in Brazil was included in all analyses.
Results: MALDI-TOF-MS identified isolates as C. pseudohaemulonii and C. duobushaemulonii albeit with low scores and therefore molecular methods were required for accurate identification. ITS sequence analyses clearly differentiated C. vulturna from other species in the C. haemulonii species complex. WGS proved the presence of a clonal outbreak with C. vulturna involving 14 paediatric patients. Antifungal susceptibility testing (AFST) with two methods showed the isolates had low MICs of commonly available antifungals.
Conclusion: This study describes an outbreak due to the rare yeast C. vulturna, related to C. auris, during a four-month period in patients admitted to a paediatric oncology ward in a Brazilian hospital. In contrast to previous studies the yeast was susceptible to all antifungals and patient outcome was good.
目的Vulturna 是一种新出现的念珠菌,属于 Metschnikowiaceae 家族的 Candida haemulonii 菌种群:在这项回顾性队列研究中,我们对巴西一家医院的儿科癌症患者在 4 个月内的 14 个 Vulturna 血流分离菌株进行了基因分型。为了证明疫情爆发,我们进行了 ITS 序列分析和全基因组测序(WGS)。抗真菌药敏试验采用 CLSI 参考方法和商用 Sensititre YeastOne (SYO) YO10 菌落总数计数板进行。所有分析均包括来自巴西另一地区的对照 C. vulturna 分离物:结果:MALDI-TOF-MS 鉴定出分离物为 C. pseudohaemulonii 和 C. duobushaemulonii,尽管得分较低,因此需要采用分子方法进行准确鉴定。ITS 序列分析将 C. vulturna 与 C. haemulonii 种群中的其他物种明确区分开来。WGS 证明,在 14 名儿科患者中爆发了 C. vulturna 的克隆疫情。采用两种方法进行的抗真菌药敏试验(AFST)显示,分离菌株对常用抗真菌药物的 MIC 值较低:本研究描述了巴西一家医院的儿科肿瘤病房在四个月内爆发的罕见酵母菌 C. vulturna(与 C. auris 相关)疫情。与之前的研究不同的是,该酵母菌对所有抗真菌药都敏感,而且患者的预后良好。
{"title":"Clonal outbreak of Candida vulturna in a paediatric oncology ward in Maranhão, Brazil.","authors":"Alessandra Teixeira de Macedo, Daniel Wagner de Castro Lima Santos, Bram Spruijtenburg, Dayse Azevedo Coelho de Souza, Leila Ferreira Moreira Dos Santos Barbos, Sirlei Garcia Marques, Julliana Ribeiro Alves Dos Santos, Eelco F J Meijer, Theun de Groot, Conceição de Maria Pedrozo E Silva de Azevedo, Jacques F Meis","doi":"10.1016/j.jinf.2024.106349","DOIUrl":"https://doi.org/10.1016/j.jinf.2024.106349","url":null,"abstract":"<p><strong>Objective: </strong>To describe an outbreak due to Candida vulturna, a newly emerging Candida species belonging to the Candida haemulonii species complex in the Metschnikowiaceae family.</p><p><strong>Methods: </strong>In this retrospective cohort study we genotyped 14C. vulturna bloodstream isolates, occurring in a 4-month-period in paediatric cancer patients in a Brazilian hospital. To prove an outbreak, ITS sequence analysis and whole genome sequencing (WGS) was done. Antifungal susceptibility was performed with the reference CLSI method and the commercial Sensititre YeastOne (SYO) YO10 plates. A control C. vulturna isolate from another region in Brazil was included in all analyses.</p><p><strong>Results: </strong>MALDI-TOF-MS identified isolates as C. pseudohaemulonii and C. duobushaemulonii albeit with low scores and therefore molecular methods were required for accurate identification. ITS sequence analyses clearly differentiated C. vulturna from other species in the C. haemulonii species complex. WGS proved the presence of a clonal outbreak with C. vulturna involving 14 paediatric patients. Antifungal susceptibility testing (AFST) with two methods showed the isolates had low MICs of commonly available antifungals.</p><p><strong>Conclusion: </strong>This study describes an outbreak due to the rare yeast C. vulturna, related to C. auris, during a four-month period in patients admitted to a paediatric oncology ward in a Brazilian hospital. In contrast to previous studies the yeast was susceptible to all antifungals and patient outcome was good.</p>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106349"},"PeriodicalIF":14.3,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631757","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-08DOI: 10.1016/j.jinf.2024.106341
Sana Mahtab, Zachary J Madewell, Vicky Baillie, Ziyaad Dangor, Sanjay G Lala, Nega Assefa, Mulu Berihun, Lola Madrid, Lemma Demissie Regassa, J Anthony G Scott, Soter Ameh, Joseph S Bangura, Okokon Ita, Erick Kaluma, Ikechukwu Udo Ogbuanu, Brigitte Gaume, Karen L Kotloff, Samba O Sow, Milagritos D Tapia, Sara Ajanovic, Marcelino Garrine, Inacio Mandomando, Rosauro Varo, Elisio G Xerinda, Muntasir Alam, Shams El Arifeen, Emily S Gurley, Mohammad Zahid Hossain, Afruna Rahman, Victor Akelo, Kitiezo Aggrey Igunza, Clayton Onyango, Dickens Onyango, Jennifer R Verani, Portia Mutevedzi, Cynthia G Whitney, Dianna M Blau, Shabir A Madhi, Quique Bassat
Background: The role of meningitis in causing deaths and in children under 5 is unclear, especially since widespread use of vaccines to prevent common causes of meningitis. Child Health and Mortality Prevention Surveillance (CHAMPS) uses post-mortem minimally invasive tissue sampling (MITS) and ante-mortem data to explore death causes. We aimed to assess meningitis's contribution to mortality and identify causative pathogens in children under 5 within CHAMPS Network sites.
Method: In this observational study, we analyzed deaths in live-born children <5 years of age that occurred between December 16, 2016, and December 31, 2023, in CHAMPS catchments in six sub-Saharan African countries (Ethiopia, Kenya, Mali, Mozambique, Sierra Leone, South Africa) and Bangladesh. MITS was conducted within 24-72 h of death, including blood and cerebrospinal fluid (CSF) culture, multi-organism targeted nucleic acid amplification tests on blood, CSF and lung tissue, and histopathology of lung, liver and brain. Expert panels at each site reviewed data to attribute causes of death following ICD-10 standards.
Result: Meningitis was in the causal pathway for 7.0% (270/3857) of deaths; in 4.8% (13/270) meningitis was considered the underlying condition. Neonates accounted for 65.9% (178/270) and infants or children 34.1% (92/270). Among neonatal meningitis deaths, 55.6% (99/178) occurred ≥72 h post-hospital admission; and common pathogens were Acinetobacter baumannii (49.5%, 49/99; mainly from South Africa) and Klebsiella pneumoniae (40.4%, 40/99). Forty-four percent (79/178) of neonatal meningitis deaths were community-associated, primarily due to K. pneumoniae (35.4%, 28/79) and Escherichia coli (13.9%, 11/79). Among infant and child meningitis deaths, 43.5% (40/92) occurred ≥72 h post-admission; and common pathogens were K. pneumoniae (42.5%,17/40) and A. baumannii (17.5%, 7/40). Among community-associated meningitis deaths in infants and children (56.5%, 52/92), Streptococcus pneumoniae (34.6%, 18/52) and K. pneumoniae (19.2%, 10/52) were common pathogens. Pathogen prevalence varied by region.
Conclusion: Our study highlights meningitis as a significant contributor to under-5 mortality in low-middle-income countries. The prominent role of K. pneumoniae and A. baumannii, particularly in healthcare settings and specific regions, highlights the need for better infection control, targeted interventions, and more effective treatment strategies.
{"title":"Etiologies and comorbidities of meningitis deaths in children under 5 years in high-mortality settings: Insights from the CHAMPS Network in the post-pneumococcal vaccine era.","authors":"Sana Mahtab, Zachary J Madewell, Vicky Baillie, Ziyaad Dangor, Sanjay G Lala, Nega Assefa, Mulu Berihun, Lola Madrid, Lemma Demissie Regassa, J Anthony G Scott, Soter Ameh, Joseph S Bangura, Okokon Ita, Erick Kaluma, Ikechukwu Udo Ogbuanu, Brigitte Gaume, Karen L Kotloff, Samba O Sow, Milagritos D Tapia, Sara Ajanovic, Marcelino Garrine, Inacio Mandomando, Rosauro Varo, Elisio G Xerinda, Muntasir Alam, Shams El Arifeen, Emily S Gurley, Mohammad Zahid Hossain, Afruna Rahman, Victor Akelo, Kitiezo Aggrey Igunza, Clayton Onyango, Dickens Onyango, Jennifer R Verani, Portia Mutevedzi, Cynthia G Whitney, Dianna M Blau, Shabir A Madhi, Quique Bassat","doi":"10.1016/j.jinf.2024.106341","DOIUrl":"10.1016/j.jinf.2024.106341","url":null,"abstract":"<p><strong>Background: </strong>The role of meningitis in causing deaths and in children under 5 is unclear, especially since widespread use of vaccines to prevent common causes of meningitis. Child Health and Mortality Prevention Surveillance (CHAMPS) uses post-mortem minimally invasive tissue sampling (MITS) and ante-mortem data to explore death causes. We aimed to assess meningitis's contribution to mortality and identify causative pathogens in children under 5 within CHAMPS Network sites.</p><p><strong>Method: </strong>In this observational study, we analyzed deaths in live-born children <5 years of age that occurred between December 16, 2016, and December 31, 2023, in CHAMPS catchments in six sub-Saharan African countries (Ethiopia, Kenya, Mali, Mozambique, Sierra Leone, South Africa) and Bangladesh. MITS was conducted within 24-72 h of death, including blood and cerebrospinal fluid (CSF) culture, multi-organism targeted nucleic acid amplification tests on blood, CSF and lung tissue, and histopathology of lung, liver and brain. Expert panels at each site reviewed data to attribute causes of death following ICD-10 standards.</p><p><strong>Result: </strong>Meningitis was in the causal pathway for 7.0% (270/3857) of deaths; in 4.8% (13/270) meningitis was considered the underlying condition. Neonates accounted for 65.9% (178/270) and infants or children 34.1% (92/270). Among neonatal meningitis deaths, 55.6% (99/178) occurred ≥72 h post-hospital admission; and common pathogens were Acinetobacter baumannii (49.5%, 49/99; mainly from South Africa) and Klebsiella pneumoniae (40.4%, 40/99). Forty-four percent (79/178) of neonatal meningitis deaths were community-associated, primarily due to K. pneumoniae (35.4%, 28/79) and Escherichia coli (13.9%, 11/79). Among infant and child meningitis deaths, 43.5% (40/92) occurred ≥72 h post-admission; and common pathogens were K. pneumoniae (42.5%,17/40) and A. baumannii (17.5%, 7/40). Among community-associated meningitis deaths in infants and children (56.5%, 52/92), Streptococcus pneumoniae (34.6%, 18/52) and K. pneumoniae (19.2%, 10/52) were common pathogens. Pathogen prevalence varied by region.</p><p><strong>Conclusion: </strong>Our study highlights meningitis as a significant contributor to under-5 mortality in low-middle-income countries. The prominent role of K. pneumoniae and A. baumannii, particularly in healthcare settings and specific regions, highlights the need for better infection control, targeted interventions, and more effective treatment strategies.</p>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106341"},"PeriodicalIF":14.3,"publicationDate":"2024-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631763","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-07DOI: 10.1016/j.jinf.2024.106339
Bing Han , Chunling Du , Min Deng , Renhong Tang , Jianping Dong , Xu Song , Yunfeng Qiao , Zheng Ni , WenJie Yang , Jiankun Yang , Tianxin Xiang , Yan Huang , Yu Zhong , Zhongfa Zhang , Lisheng Yang , Jikang Yang , Jinghua Wang , Lanbing Zheng , Libing Ma , Zhinan Shou , Rongmeng Jiang
Background
Simnotrelvir has demonstrated potent anti-viral activity against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In a Phase II/III study, Simnotrelvir plus ritonavir (S/R, co-packaged) shortened the time to the resolution of symptoms in adult COVID-19 patients. However, real-world data on effectiveness of simnotrelvir/ritonavir against SARS-CoV-2 during XBB variant surges are still limited.
Study design and methods
This was a nationwide, multicenter, prospective, observational real-world study at 42 sites in China. Adult patients with mild to moderate COVID-19 and at disease onset were eligible for participation. Patients were grouped in S/R group (treated with S/R) and control group (not receiving oral antivirals for COVID-19). The primary endpoint was the COVID-19-related hospitalization or all-cause mortality within 28 days. Secondary endpoints included the time from confirmed SARS-CoV-2 infection to negative conversion, and the time to resolution of COVID-19 symptoms. Besides, serious adverse events (SAE), adverse drug reactions (ADR) and combined medication were reported. Propensity Score-Matched (PSM) analysis (1:1) was performed for adjustment for baseline variables. Hazard ratios (HR) and adjusted risk ratios (aRR) were estimated using the Cox and Modified Poisson regression, respectively.
Results
Between June 6, 2023, and December 27, 2023, 3522 patients were enrolled. S/R was associated with a reduced incidence of COVID-19-related hospitalization (6/1896 [0.3%] vs. 43/1408 [3.1%]; HR: 0.110, 95% confidence interval [CI]: 0.043 to 0.283, p < 0.001 vs control), consistently with the results after PSM (4/1381 [0.3%] in S/R vs. 40/1381 patients [2.9%]; aRR: 0.12; 95% CI: 0.05, 0.29; P < 0.001). No deaths occurred in both S/R and control groups. Matched Patients over 65 and patients with risk factors who received S/R achieved significantly reduced risk of COVID-19-related hospitalization (aRR: 0.032; 95% CI: 0.004, 0.268; aRR: 0.034; 95% CI: 0.005, 0.252, respectively; all P < 0.001). Furthermore, S/R shortened the median time to viral clearance by 1 day (6.0 vs 7.0 days; 95% CI: −2.0 to −1.0; P < 0.001) and reduced the median time to symptom resolution by 2 days (8.0 days vs 10.0 days; 95% CI: −2.0 to −1.0; P < 0.001). Besides, the proportion of patients in the S/R group using combined medication was significantly lower than that in the control group (30.2% vs 49.4%). Subgroup analysis showed potential protective effect of S/R in the elderly and patients with more than 1 risk factor.
Conclusion
In real world, S/R significantly reduced the incidence of COVID-19-related hospitalization, demonstrated favorable safety profiles, and less use of combined medication.
{"title":"Real-world effectiveness and safety of simnotrelvir/ritonavir for COVID-19: A nationwide, multicenter, prospective, observational cohort study in China","authors":"Bing Han , Chunling Du , Min Deng , Renhong Tang , Jianping Dong , Xu Song , Yunfeng Qiao , Zheng Ni , WenJie Yang , Jiankun Yang , Tianxin Xiang , Yan Huang , Yu Zhong , Zhongfa Zhang , Lisheng Yang , Jikang Yang , Jinghua Wang , Lanbing Zheng , Libing Ma , Zhinan Shou , Rongmeng Jiang","doi":"10.1016/j.jinf.2024.106339","DOIUrl":"10.1016/j.jinf.2024.106339","url":null,"abstract":"<div><h3>Background</h3><div>Simnotrelvir has demonstrated potent anti-viral activity against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In a Phase II/III study, Simnotrelvir plus ritonavir (S/R, co-packaged) shortened the time to the resolution of symptoms in adult COVID-19 patients. However, real-world data on effectiveness of simnotrelvir/ritonavir against SARS-CoV-2 during XBB variant surges are still limited.</div></div><div><h3>Study design and methods</h3><div>This was a nationwide, multicenter, prospective, observational real-world study at 42 sites in China. Adult patients with mild to moderate COVID-19 and at disease onset were eligible for participation. Patients were grouped in S/R group (treated with S/R) and control group (not receiving oral antivirals for COVID-19). The primary endpoint was the COVID-19-related hospitalization or all-cause mortality within 28 days. Secondary endpoints included the time from confirmed SARS-CoV-2 infection to negative conversion, and the time to resolution of COVID-19 symptoms. Besides, serious adverse events (SAE), adverse drug reactions (ADR) and combined medication were reported. Propensity Score-Matched (PSM) analysis (1:1) was performed for adjustment for baseline variables. Hazard ratios (HR) and adjusted risk ratios (aRR) were estimated using the Cox and Modified Poisson regression, respectively.</div></div><div><h3>Results</h3><div>Between June 6, 2023, and December 27, 2023, 3522 patients were enrolled. S/R was associated with a reduced incidence of COVID-19-related hospitalization (6/1896 [0.3%] vs. 43/1408 [3.1%]; HR: 0.110, 95% confidence interval [CI]: 0.043 to 0.283, p < 0.001 vs control), consistently with the results after PSM (4/1381 [0.3%] in S/R vs. 40/1381 patients [2.9%]; aRR: 0.12; 95% CI: 0.05, 0.29; <em>P</em> < 0.001). No deaths occurred in both S/R and control groups. Matched Patients over 65 and patients with risk factors who received S/R achieved significantly reduced risk of COVID-19-related hospitalization (aRR: 0.032; 95% CI: 0.004, 0.268; aRR: 0.034; 95% CI: 0.005, 0.252, respectively; all <em>P</em> < 0.001). Furthermore, S/R shortened the median time to viral clearance by 1 day (6.0 vs 7.0 days; 95% CI: −2.0 to −1.0; <em>P</em> < 0.001) and reduced the median time to symptom resolution by 2 days (8.0 days vs 10.0 days; 95% CI: −2.0 to −1.0; <em>P</em> < 0.001). Besides, the proportion of patients in the S/R group using combined medication was significantly lower than that in the control group (30.2% vs 49.4%). Subgroup analysis showed potential protective effect of S/R in the elderly and patients with more than 1 risk factor.</div></div><div><h3>Conclusion</h3><div>In real world, S/R significantly reduced the incidence of COVID-19-related hospitalization, demonstrated favorable safety profiles, and less use of combined medication.</div></div>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106339"},"PeriodicalIF":14.3,"publicationDate":"2024-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-06DOI: 10.1016/j.jinf.2024.106344
Elisabeth A. Dulfer , Konstantin Föhse , Esther J.M. Taks , Simone J.C.F.M. Moorlag , Eva L. Koekenbier , Josephine S. van de Maat , Jaap ten Oever , Jacobien J. Hoogerwerf , Cornelis H. van Werkhoven , Marc J.M. Bonten , Astrid van Hylckama Vlieg , Frits R. Rosendaal , Mihai G. Netea
Objectives
Previous research has suggested beneficial heterologous effects of the Bacillus Calmette-Guérin (BCG) vaccine on non-mycobacterial infections and other immune-mediated diseases. During the COVID-19 pandemic, randomized controlled trials BCG-PRIME (n = 5349) and BCG-CORONA-ELDERLY (n = 1907) investigated the impact of BCG on SARS-CoV-2 infections in older individuals. We extended the follow-up in these studies by one year (BCG-Long Term study), to assess the overall effects of BCG vaccination on infectious and immune-mediated diseases in individuals aged over 60.
Methods
Prior participants were invited to complete a one-year follow-up survey after their completion of the original trial. Data on vaccinations, hospital admissions, infectious episodes, and new medical diagnoses were collected and compared between BCG- and placebo-vaccinated participants. Variables of interest were combined with the previous trial databases and analyzed using relative risks (RR) and an adjusted Cox regression model accounting for participation probability.
Results
The response in the follow-up survey was 60%, including 4238 individuals in the final analysis (2317 had received BCG and 1921 placebo). Incidence and severity of infectious diseases and other diagnoses, including cardiovascular diseases and cancer, did not differ between the groups. The proportion of individuals hospitalized for cardiac arrhythmias after BCG was two-fold higher than reported after placebo (1.6% versus 0.8%, RR 2.0 (95% confidence interval 1.1–3.6)). Cardiac arrhythmia-related hospitalizations were primarily due to exacerbation of pre-existing arrhythmias.
Conclusion
The results of the present study confirm that BCG has no relevant effect on non-mycobacterial infectious diseases and other immune-mediated diseases in a population of generally mycobacteria-naïve older Dutch individuals in the two years following vaccination. However, our study suggests that BCG may aggravate pre-existing cardiac arrhythmia, which warrants further investigation.
{"title":"The effect of BCG vaccination in the elderly on infectious and non-infectious immune-mediated diseases","authors":"Elisabeth A. Dulfer , Konstantin Föhse , Esther J.M. Taks , Simone J.C.F.M. Moorlag , Eva L. Koekenbier , Josephine S. van de Maat , Jaap ten Oever , Jacobien J. Hoogerwerf , Cornelis H. van Werkhoven , Marc J.M. Bonten , Astrid van Hylckama Vlieg , Frits R. Rosendaal , Mihai G. Netea","doi":"10.1016/j.jinf.2024.106344","DOIUrl":"10.1016/j.jinf.2024.106344","url":null,"abstract":"<div><h3>Objectives</h3><div>Previous research has suggested beneficial heterologous effects of the Bacillus Calmette-Guérin (BCG) vaccine on non-mycobacterial infections and other immune-mediated diseases. During the COVID-19 pandemic, randomized controlled trials BCG-PRIME (n = 5349) and BCG-CORONA-ELDERLY (n = 1907) investigated the impact of BCG on SARS-CoV-2 infections in older individuals. We extended the follow-up in these studies by one year (BCG-Long Term study), to assess the overall effects of BCG vaccination on infectious and immune-mediated diseases in individuals aged over 60.</div></div><div><h3>Methods</h3><div>Prior participants were invited to complete a one-year follow-up survey after their completion of the original trial. Data on vaccinations, hospital admissions, infectious episodes, and new medical diagnoses were collected and compared between BCG- and placebo-vaccinated participants. Variables of interest were combined with the previous trial databases and analyzed using relative risks (RR) and an adjusted Cox regression model accounting for participation probability.</div></div><div><h3>Results</h3><div>The response in the follow-up survey was 60%, including 4238 individuals in the final analysis (2317 had received BCG and 1921 placebo). Incidence and severity of infectious diseases and other diagnoses, including cardiovascular diseases and cancer, did not differ between the groups. The proportion of individuals hospitalized for cardiac arrhythmias after BCG was two-fold higher than reported after placebo (1.6% versus 0.8%, RR 2.0 (95% confidence interval 1.1–3.6)). Cardiac arrhythmia-related hospitalizations were primarily due to exacerbation of pre-existing arrhythmias.</div></div><div><h3>Conclusion</h3><div>The results of the present study confirm that BCG has no relevant effect on non-mycobacterial infectious diseases and other immune-mediated diseases in a population of generally mycobacteria-naïve older Dutch individuals in the two years following vaccination. However, our study suggests that BCG may aggravate pre-existing cardiac arrhythmia, which warrants further investigation.</div></div>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106344"},"PeriodicalIF":14.3,"publicationDate":"2024-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142631773","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-04DOI: 10.1016/j.jinf.2024.106330
Paul Loubet , Laetitia Roustand , Aurélie Schmidt , Pandora Jacquemet , Benoît de Wazières , Clémentine Vabre , Marie Nishimwe , Emmanuel Faure
Objective
To estimate the incidence of hospitalization with a diagnosis of herpes zoster (HZ) and post-herpetic neuralgia (PHN) in France between 2013 and 2020, overall and stratified by age-group and immune status.
Methods
Retrospective observational, database study, using the French hospital discharge database, which includes private and public data for all day-care and inpatient stays. Adults aged ≥18 years, hospitalized between January 1, 2013, and December 31, 2020, with a diagnosis of HZ or PHN, were included.
Results
Overall, 62 077 adults had a first hospitalization with a diagnosis of HZ or PHN during the observation period. HZ and/or PHN incidence ranged between 14.6 and 16.3 hospitalizations/100 000 persons and was highest in people aged ≥80 years (97.6 hospitalizations/100 000 persons).
The immunocompromised (IC) population accounted for 22% of the overall study population. IC patients had longer lengths of stay for HZ per episode compared with non-IC patients (15.5 ± 19.4 days vs 12.2 ± 13.5 days) and higher in-patient mortality (8% vs 4%).
Average annual hospitalization costs per patient were higher in the IC vs non-IC population (€8018 vs €5603).
Conclusions
Older age increases hospitalization rates up to 6-fold and IC status increases in-patient mortality up to two-fold.
Clinical Trial Registration
The study was conducted by HEVA and data were provided by ATIH according to French regulatory and data protection procedures.
目的估计 2013 年至 2020 年期间法国带状疱疹(HZ)和带状疱疹后遗神经痛(PHN)的总体住院率,并按年龄组和免疫状况进行分层:回顾性观察数据库研究,使用法国医院出院数据库,其中包括所有日间护理和住院治疗的私人和公共数据。研究对象包括年龄≥18岁、在2013年1月1日至2020年12月31日期间住院并诊断为HZ或PHN的成年人:在观察期内,共有 62 077 名成人因诊断为 HZ 或 PHN 而首次住院。HZ和/或PHN发病率介于14.6至16.3次住院/10万人之间,年龄≥80岁者发病率最高(97.6次住院/10万人)。免疫力低下(IC)人群占研究总人数的 22%。与非 IC 患者相比,IC 患者每次因 HZ 住院的时间更长(15.5 ± 19.4 天 vs 12.2 ± 13.5 天),住院死亡率更高(8% vs 4%)。IC患者与非IC患者的人均年住院费用更高(8018欧元对5603欧元):结论:年龄越大,住院率最高会增加 6 倍,而 IC 患者的住院死亡率最高会增加 2 倍。
{"title":"Clinical profile of herpes zoster-related hospitalizations and complications: A French population-based database study","authors":"Paul Loubet , Laetitia Roustand , Aurélie Schmidt , Pandora Jacquemet , Benoît de Wazières , Clémentine Vabre , Marie Nishimwe , Emmanuel Faure","doi":"10.1016/j.jinf.2024.106330","DOIUrl":"10.1016/j.jinf.2024.106330","url":null,"abstract":"<div><h3>Objective</h3><div>To estimate the incidence of hospitalization with a diagnosis of herpes zoster (HZ) and post-herpetic neuralgia (PHN) in France between 2013 and 2020, overall and stratified by age-group and immune status.</div></div><div><h3>Methods</h3><div>Retrospective observational, database study, using the French hospital discharge database, which includes private and public data for all day-care and inpatient stays. Adults aged ≥18 years, hospitalized between January 1, 2013, and December 31, 2020, with a diagnosis of HZ or PHN, were included.</div></div><div><h3>Results</h3><div>Overall, 62 077 adults had a first hospitalization with a diagnosis of HZ or PHN during the observation period. HZ and/or PHN incidence ranged between 14.6 and 16.3 hospitalizations/100 000 persons and was highest in people aged ≥80 years (97.6 hospitalizations/100 000 persons).</div><div>The immunocompromised (IC) population accounted for 22% of the overall study population. IC patients had longer lengths of stay for HZ per episode compared with non-IC patients (15.5 ± 19.4 days vs 12.2 ± 13.5 days) and higher in-patient mortality (8% vs 4%).</div><div>Average annual hospitalization costs per patient were higher in the IC vs non-IC population (€8018 vs €5603).</div></div><div><h3>Conclusions</h3><div>Older age increases hospitalization rates up to 6-fold and IC status increases in-patient mortality up to two-fold.</div></div><div><h3>Clinical Trial Registration</h3><div>The study was conducted by HEVA and data were provided by ATIH according to French regulatory and data protection procedures.</div></div>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106330"},"PeriodicalIF":14.3,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142591884","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-04DOI: 10.1016/j.jinf.2024.106342
Anita M. Shete, Shubin Chenayil, Rima R. Sahay, CB Sindhu, Savita Yadav, Pranita Gawande, Deepak Y. Patil, Abhinendra Kumar, Sreelekshmy Mohandas, Pragya D. Yadav
{"title":"Genomic analysis confirmed the importation of first mPox Clade Ib case in Kerala, India from Dubai, UAE","authors":"Anita M. Shete, Shubin Chenayil, Rima R. Sahay, CB Sindhu, Savita Yadav, Pranita Gawande, Deepak Y. Patil, Abhinendra Kumar, Sreelekshmy Mohandas, Pragya D. Yadav","doi":"10.1016/j.jinf.2024.106342","DOIUrl":"10.1016/j.jinf.2024.106342","url":null,"abstract":"","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106342"},"PeriodicalIF":14.3,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142591891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01DOI: 10.1016/j.jinf.2024.106345
Huan Li , Yi Feng , Yang Xu, , Tang Li , Qi Li, Wei Lin, Wanqi Ni, Jianwei Yang, Wansi Mao, Zheng Wang, Hui Xing
{"title":"Characterization of a novel HIV-1 second-generation circulating recombinant form (CRF172_0755) among men who have sex with men in China","authors":"Huan Li , Yi Feng , Yang Xu, , Tang Li , Qi Li, Wei Lin, Wanqi Ni, Jianwei Yang, Wansi Mao, Zheng Wang, Hui Xing","doi":"10.1016/j.jinf.2024.106345","DOIUrl":"10.1016/j.jinf.2024.106345","url":null,"abstract":"","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106345"},"PeriodicalIF":14.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142569926","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01DOI: 10.1016/j.jinf.2024.106338
Antonia Ho , Neil McInnes , Andrew Blunsum , Joanna Quinn , Daniel Lynagh , Michael E. Murphy , Rory Gunson , Alisdair MacConnachie , David J. Lowe
Objectives
We report the findings of a novel enhanced syndromic surveillance that characterised influenza- and SARS-CoV-2-associated severe acute respiratory illness (SARI) in the 2021/2022 winter season.
Methods
Prospective cohort study of adults admitted to the Queen Elizabeth University Hospital, Glasgow, with a severe acute respiratory illness. Patient demographics, clinical history, admission details, and outcomes were recorded. Data were available to Public Health Scotland (PHS) and clinicians weekly.
Results
Between November 2021 and May 2022, 1063 hospitalised SARI episodes in 1037 adult patients were identified. Median age was 72.0 years, and 44.5% were male. Most (82.6%) SARI cases had ≥1 co-morbidity; chronic lung disease (50.0%) and malignancy (22.5%) were the most frequently reported.
Overall, 229 (22%) and 33 (3%) SARI episodes were SARS-CoV-2 and influenza A PCR positive, respectively. 74.7%, 6.5% and 43.0% SARI episodes received antibiotics, antivirals, and steroids, respectively (54.5%, 11.0% and 51.3% among COVID-19 patients). 1.1% required mechanical ventilation and 7.8% died. Male sex, multimorbidity, frailty, respiratory rate >30, low GCS and chest X-ray consolidation were predictive of in-hospital mortality.
Conclusion
Near real-time hospitalised SARI syndromic surveillance characterised the evolving clinical epidemiology of SARS-CoV-2 and influenza, high antimicrobial use, and predictors of inpatient mortality among hospitalised SARI patients.
目的我们报告了一项新型强化综合征监测的结果,该监测描述了 2021/2022 年冬季流感和 SARS-CoV-2 相关严重急性呼吸道疾病(SARI)的特征:对格拉斯哥伊丽莎白女王大学医院收治的患有严重急性呼吸道疾病的成人进行前瞻性队列研究。研究记录了患者的人口统计学特征、临床病史、入院详情和结果。苏格兰公共卫生署(PHS)和临床医生每周都能获得相关数据:结果:2021 年 11 月至 2022 年 5 月期间,确定了 1037 名成年患者的 1063 例 SARI 住院病例。中位年龄为 72.0 岁,44.5% 为男性。大多数 SARI 病例(82.6%)有 1 种以上的并发症;慢性肺病(50.0%)和恶性肿瘤(22.5%)是最常见的并发症。总体而言,SARS-CoV-2 和甲型流感 PCR 阳性的 SARI 病例分别为 229 例(22%)和 33 例(3%)。74.7%、6.5% 和 43.0% 的 SARI 患者分别接受了抗生素、抗病毒药物和类固醇治疗(COVID-19 患者中分别为 54.5%、11.0% 和 51.3%)。1.1%的患者需要机械通气,7.8%的患者死亡。男性、多病、体弱、呼吸频率大于 30、GCS 低和胸部 X 光片合并症可预测院内死亡率:结论:近乎实时的住院 SARI 综合征监测描述了不断变化的 SARS-CoV-2 和流感临床流行病学、抗菌药物的大量使用以及住院 SARI 患者的住院死亡率预测因素。
{"title":"Near real-time severe acute respiratory illness surveillance characterising influenza and COVID-19 epidemiology in hospitalised adults, 2021-22","authors":"Antonia Ho , Neil McInnes , Andrew Blunsum , Joanna Quinn , Daniel Lynagh , Michael E. Murphy , Rory Gunson , Alisdair MacConnachie , David J. Lowe","doi":"10.1016/j.jinf.2024.106338","DOIUrl":"10.1016/j.jinf.2024.106338","url":null,"abstract":"<div><h3>Objectives</h3><div>We report the findings of a novel enhanced syndromic surveillance that characterised influenza- and SARS-CoV-2-associated severe acute respiratory illness (SARI) in the 2021/2022 winter season.</div></div><div><h3>Methods</h3><div>Prospective cohort study of adults admitted to the Queen Elizabeth University Hospital, Glasgow, with a severe acute respiratory illness. Patient demographics, clinical history, admission details, and outcomes were recorded. Data were available to Public Health Scotland (PHS) and clinicians weekly.</div></div><div><h3>Results</h3><div>Between November 2021 and May 2022, 1063 hospitalised SARI episodes in 1037 adult patients were identified. Median age was 72.0 years, and 44.5% were male. Most (82.6%) SARI cases had ≥1 co-morbidity; chronic lung disease (50.0%) and malignancy (22.5%) were the most frequently reported.</div><div>Overall, 229 (22%) and 33 (3%) SARI episodes were SARS-CoV-2 and influenza A PCR positive, respectively. 74.7%, 6.5% and 43.0% SARI episodes received antibiotics, antivirals, and steroids, respectively (54.5%, 11.0% and 51.3% among COVID-19 patients). 1.1% required mechanical ventilation and 7.8% died. Male sex, multimorbidity, frailty, respiratory rate >30, low GCS and chest X-ray consolidation were predictive of in-hospital mortality.</div></div><div><h3>Conclusion</h3><div>Near real-time hospitalised SARI syndromic surveillance characterised the evolving clinical epidemiology of SARS-CoV-2 and influenza, high antimicrobial use, and predictors of inpatient mortality among hospitalised SARI patients.</div></div>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106338"},"PeriodicalIF":14.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142569933","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}