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The molecular bacterial load assay predicts treatment responses in patients with pre-XDR/XDR-tuberculosis more accurately than GeneXpert Ultra MTB/Rif.
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-27 DOI: 10.1016/j.jinf.2024.106399
Marit Neumann, Maja Reimann, Dumitru Chesov, Cristina Popa, Antonela Dragomir, Oana Popescu, Roxana Munteanu, Alexandra Hölscher, Isobella Honeyborne, Jan Heyckendorf, Christoph Lange, Christoph Hölscher, Barbara Kalsdorf

Objectives: Early detection of treatment failure is essential to improve the management of drug-resistant tuberculosis (DR-TB). We evaluated the molecular bacterial load assay (MBLA) in comparison to standard diagnostic tests for monitoring therapy of patients affected by drug-resistant TB.

Methods: The performance of MBLA in tracking treatment response in a prospective cohort of patients with pulmonary MDR/RR- and pre-XDR/XDR-TB was compared with mycobacterial culture, mycobacterial DNA detection using GeneXpert (Xpert) and microscopy detection of sputum acid-fast-bacilli.

Results: Mycobacterium tuberculosis culture conversion was used as the read-out for treatment responses. The MBLA was most concordant during the early phase of treatment, detecting changes in bacterial load with similar accuracy to microscopy and outperforming Xpert. When considering all timepoints, concordance with MGIT results was 72.1% for MBLA, 57.4% for Xpert and 76.7% for microscopy. The AUC for culture conversion was higher for MBLA (0.88, CI 0.84-0.95) than for Xpert (0.78, CI 0.72-0.85) and microscopy (0.77, CI 0.71-0.83).

Conclusions: MBLA was superior in the early identification of successful culture conversion compared to microscopy and Xpert and could be a useful biomarker to evaluate novel entities in Phase IIA early-bactericidal-activity drug trials regardless of the degree of M. tuberculosis drug resistance.

目的:早期发现治疗失败对于改善耐药结核病(DR-TB)的管理至关重要。我们评估了分子细菌负荷测定(MBLA)与标准诊断测试的比较,以监测耐药结核病患者的治疗情况:方法:我们比较了分子细菌负荷测定与分枝杆菌培养、使用基因Xpert(Xpert)检测分枝杆菌DNA以及显微镜检测痰液中的耐酸杆菌在追踪肺部MDR/RR-和前XDR/XDR-TB患者治疗反应方面的性能:结果:结核分枝杆菌培养转化率被用作治疗反应的读数。在治疗的早期阶段,MBLA 的一致性最高,其检测细菌负荷变化的准确性与显微镜相似,但优于 Xpert。考虑到所有时间点,MBLA 与 MGIT 结果的一致性为 72.1%,Xpert 为 57.4%,显微镜为 76.7%。MBLA的培养转换AUC(0.88,CI 0.84-0.95)高于Xpert(0.78,CI 0.72-0.85)和显微镜检查(0.77,CI 0.71-0.83):与显微镜检查和 Xpert 相比,MBLA 在早期识别成功的培养转换方面更具优势,无论结核杆菌的耐药程度如何,MBLA 都可以作为一种有用的生物标志物,用于评估 IIA 期早期杀菌活性药物试验中的新型实体。
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引用次数: 0
U.parvum serovar 6 may be a novel element in the progression of HPV infection to CIN: A cross-sectional study of 7,058 women.
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-26 DOI: 10.1016/j.jinf.2024.106397
Yingxuan Zhang, Rongdan Chen, Zuyi Zhou, Wei Qing, Cancan Qi, Jinxia Ou, Hongwei Zhou, Muxuan Chen

Background: Ureaplasma parvum (U. parvum) is generally regarded as innocuous, and studies focusing on variations in pathogenicity among U. parvum serovars are inadequate. We elucidated the variations in the pathogenicity of U. parvum serovars in promoting human papillomavirus (HPV) infection and cervical intraepithelial neoplasia (CIN).

Methods: This cross-sectional study used baseline data from a Chinese multicenter prospective cohort of women of childbearing age undergoing routine cervical cancer screening. We employed multivariate logistic regression analysis to estimate the pathogenic effects of specific U. parvum serovars on HPV infection and CIN. Causal mediation analysis was performed to ascertain the direct effects of specific U. parvum serovars on CIN and their indirect implications via HPV infection.

Findings: The final data analysis encompassed 7,058 participants. Upon adjusting for confounding factors, a positive association was observed between U. parvum serovars 1, 3, and 6 and HPV infection (OR 1.53, 95%CI 1.15-2.03; OR 1.31, 95%CI 1.06-1.64; OR 2.34, 95%CI 1.90-2.87); however, only participants with U. parvum serovar 6 showed an increased risk of CIN (OR 1.90, 95%CI 1.19-3.02). No substantial correlation was observed between U. parvum serovar 14 and HPV or CIN incidence. HPV infection potentially mediates the influence of U. parvum serovar 6 on CIN, with a mediation proportion of 76.66%.

Interpretations: Our findings suggest that different U. parvum serovars vary in pathogenicity regarding HPV and CIN. Early detection of specific U. parvum serovars, such as U. parvum serovar 6, in HPV-infected individuals may enable early intervention therapies, and reduce the risk of CIN development.

{"title":"U.parvum serovar 6 may be a novel element in the progression of HPV infection to CIN: A cross-sectional study of 7,058 women.","authors":"Yingxuan Zhang, Rongdan Chen, Zuyi Zhou, Wei Qing, Cancan Qi, Jinxia Ou, Hongwei Zhou, Muxuan Chen","doi":"10.1016/j.jinf.2024.106397","DOIUrl":"https://doi.org/10.1016/j.jinf.2024.106397","url":null,"abstract":"<p><strong>Background: </strong>Ureaplasma parvum (U. parvum) is generally regarded as innocuous, and studies focusing on variations in pathogenicity among U. parvum serovars are inadequate. We elucidated the variations in the pathogenicity of U. parvum serovars in promoting human papillomavirus (HPV) infection and cervical intraepithelial neoplasia (CIN).</p><p><strong>Methods: </strong>This cross-sectional study used baseline data from a Chinese multicenter prospective cohort of women of childbearing age undergoing routine cervical cancer screening. We employed multivariate logistic regression analysis to estimate the pathogenic effects of specific U. parvum serovars on HPV infection and CIN. Causal mediation analysis was performed to ascertain the direct effects of specific U. parvum serovars on CIN and their indirect implications via HPV infection.</p><p><strong>Findings: </strong>The final data analysis encompassed 7,058 participants. Upon adjusting for confounding factors, a positive association was observed between U. parvum serovars 1, 3, and 6 and HPV infection (OR 1.53, 95%CI 1.15-2.03; OR 1.31, 95%CI 1.06-1.64; OR 2.34, 95%CI 1.90-2.87); however, only participants with U. parvum serovar 6 showed an increased risk of CIN (OR 1.90, 95%CI 1.19-3.02). No substantial correlation was observed between U. parvum serovar 14 and HPV or CIN incidence. HPV infection potentially mediates the influence of U. parvum serovar 6 on CIN, with a mediation proportion of 76.66%.</p><p><strong>Interpretations: </strong>Our findings suggest that different U. parvum serovars vary in pathogenicity regarding HPV and CIN. Early detection of specific U. parvum serovars, such as U. parvum serovar 6, in HPV-infected individuals may enable early intervention therapies, and reduce the risk of CIN development.</p>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106397"},"PeriodicalIF":14.3,"publicationDate":"2024-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142899822","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of the first unambiguous HIV-1 CRF07_BC/CRF08_BC circulating recombinant form (CRF160_0708) in Yunnan, China.
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-24 DOI: 10.1016/j.jinf.2024.106383
Min Chen, Yanling Ma, Huichao Chen, Jie Dai, Lijuan Dong, Manhong Jia, Wenfei Ding
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引用次数: 0
The increasing prevalence of Japanese spotted fever in China: A dominant rickettsial threat.
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-23 DOI: 10.1016/j.jinf.2024.106387
Zhongqiu Teng, Xue Zhang, Na Zhao, Lupeng Dai, Xianxian Zhang, Ling Han, Tian Qin
{"title":"The increasing prevalence of Japanese spotted fever in China: A dominant rickettsial threat.","authors":"Zhongqiu Teng, Xue Zhang, Na Zhao, Lupeng Dai, Xianxian Zhang, Ling Han, Tian Qin","doi":"10.1016/j.jinf.2024.106387","DOIUrl":"10.1016/j.jinf.2024.106387","url":null,"abstract":"","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106387"},"PeriodicalIF":14.3,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142899799","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The need for inclusion of the Hib vaccine in mainland national immunization program in China.
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-23 DOI: 10.1016/j.jinf.2024.106386
Yonghong Yang, Xuzhuang Shen, Huili Hu, Yajuan Wang, Dingle Yu, Jun Yin
{"title":"The need for inclusion of the Hib vaccine in mainland national immunization program in China.","authors":"Yonghong Yang, Xuzhuang Shen, Huili Hu, Yajuan Wang, Dingle Yu, Jun Yin","doi":"10.1016/j.jinf.2024.106386","DOIUrl":"https://doi.org/10.1016/j.jinf.2024.106386","url":null,"abstract":"","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106386"},"PeriodicalIF":14.3,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142899819","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mechanisms of MHC-II binding by novel influenza A viruses and their cross-species transmission potential 新型甲型流感病毒与 MHC-II 结合的机制及其跨物种传播潜力。
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-01 DOI: 10.1016/j.jinf.2024.106354
Qingyang Liu , Peiluan Zhong , Qinglin Wei, Xiaorong Wang, Yudong He, Min Yang, Pengcheng Wei
{"title":"Mechanisms of MHC-II binding by novel influenza A viruses and their cross-species transmission potential","authors":"Qingyang Liu ,&nbsp;Peiluan Zhong ,&nbsp;Qinglin Wei,&nbsp;Xiaorong Wang,&nbsp;Yudong He,&nbsp;Min Yang,&nbsp;Pengcheng Wei","doi":"10.1016/j.jinf.2024.106354","DOIUrl":"10.1016/j.jinf.2024.106354","url":null,"abstract":"","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106354"},"PeriodicalIF":14.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142668039","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Efficacy and safety of antistaphylococcal penicillin or cephazolin-based combinations versus monotherapy for methicillin-susceptible Staphylococcus aureus infective endocarditis: A propensity score analysis of nationwide prospective cohort 以抗葡萄球菌青霉素或头孢唑啉为基础的联合疗法与单一疗法治疗甲氧西林易感金黄色葡萄球菌感染性心内膜炎的疗效和安全性。全国前瞻性队列的倾向得分分析。
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-01 DOI: 10.1016/j.jinf.2024.106352
Jorge Calderón-Parra , Sara Grillo , Patricia Muñoz , Marina Machado-Vilchez , Antonia Delgado-Montero , Arístides De Alarcón-González , Manuel Poyato-Borrego , MA Goenaga-Sánchez , M. Carmen Fariñas-Alvarez , José M. Miró , Luis Eduardo López-Cortés , Raquel Rodríguez-García , José A. Oteo , Antonio Martínez-Ramos , on behalf of the Spanish Collaboration on Endocarditis (GAMES)

Objectives

We aimed to evaluate the usefulness of antistaphylococcal penicillin (ASP) or cephazolin-based combinations versus monotherapy in patients with native-valve infective endocarditis (IE) caused by methicillin-susceptible Staphylococcus aureus (MSSA).

Methods

Post-hoc analysis of a multicentre prospective cohort. We include patients from 2008 to 2022 with definite native-valve, left-side IE due to MSSA treated primarily with ASP/cephazolin. Patients were categorized according to whether they initially received monotherapy or combination therapy for more than 72 h. A propensity score-matched cohort was planned.

Results

Out of 420 included cases, 94 (22.4%) received monotherapy and 326 (77.6%) combination. Median combination duration was 14 days (interquartile range 10–20).
Sixty-eight combination cases were matched with 68 monotherapy controls. Baseline characteristics were well balanced. There were no differences in in-hospital or one-year mortality between groups (OR 0.85, 95%CI 0.33–2.18 and HR 0.68, 95%CI 0.35–1.31, respectively). Endocarditis relapses and persistent bacteraemia rates were similar (0% vs 1.5%, p = 1.000; and 19.1% vs 13.2%, p = 0.352, respectively). Drug-related adverse events were more frequent in the combination group (15.0% vs 1.1%, p < 0.001).

Conclusions

Antibiotic combinations for patients with native valve left-sided MSSA endocarditis did not improve patient’s outcomes. Drug-related adverse events were more frequent in combination patients.
研究目的我们旨在评估甲氧西林易感金黄色葡萄球菌(MSSA)引起的原生瓣膜感染性心内膜炎(IE)患者使用抗葡萄球菌青霉素(ASP)或头孢唑啉联合疗法与单药治疗的效果:多中心前瞻性队列的事后分析。方法:对多中心前瞻性队列进行事后分析。我们纳入了 2008 年至 2022 年期间因 MSSA 而确诊为原生瓣膜左侧 IE 的患者,他们主要接受了 ASP/cephazolin 治疗。根据患者最初接受单药治疗还是72小时以上的联合治疗进行分类。计划建立倾向评分匹配队列:在纳入的 420 例患者中,94 例(22.4%)接受了单一疗法,326 例(77.6%)接受了联合疗法。联合治疗的中位持续时间为 14 天(四分位数间距为 10-20)。68 例联合用药病例与 68 例单一疗法对照组进行了配对。基线特征非常均衡。两组患者的院内死亡率和一年死亡率无差异(OR 0.85,95%CI 0.33-2.18;HR 0.68,95%CI 0.35-1.31)。心内膜炎复发率和持续菌血症率相似(分别为0% vs 1.5%,p=1.000;19.1% vs 13.2%,p=0.352)。联合用药组的药物相关不良事件发生率更高(15.0% 对 1.1%,P=0.352):对原生瓣左侧MSSA心内膜炎患者联合使用抗生素并不能改善患者的预后。联合用药组患者发生药物相关不良事件的频率更高。
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引用次数: 0
The effect of pre-COVID and post-COVID vaccination on long COVID: A systematic review and meta-analysis 接种疫苗前和接种疫苗后对长期慢性病毒性反应的影响:系统回顾和荟萃分析。
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-01 DOI: 10.1016/j.jinf.2024.106358
Nick King Ngai Chow , Charmaine Yuk Wah Tsang , Yan Hei Chan , Shalina Alisha Telaga , Lok Yan Andes Ng , Chit Ming Chung , Yan Ming Yip , Peter Pak-Hang Cheung

Background

Long COVID affects millions of people and results in a substantial decrease in quality of life. Previous primary studies and reviews attempted to study the effect of vaccination against long COVID, but these studies varied in the cut-off time of long COVID. We adhered to the WHO’s definition of long COVID and conducted a systematic review and meta-analysis on the effect of pre-COVID and post-COVID vaccination on long COVID.

Methods

We obtained data from 13 databases up to 18 February 2024, including peer reviewed and preprint studies. Our inclusion criteria were: (1) long COVID definition as 3 months or beyond, (2) comparing long COVID symptoms between vaccinated and unvaccinated groups, (3) subjects received vaccinations either before or after infected with COVID, (4) the number of doses received by participants was specified. We extracted study characteristics and data and computed the summary odds ratio (OR) with the DerSimonian and Laird random effects model. We then performed subgroup analyses based on the main vaccine brand and long COVID assessment method. ROBINS-I framework was used for assessment of risk of bias and the GRADE approach was used for evaluating the certainty of evidence.

Findings

We included data from 25 observational studies (n = 14,128,260) with no randomised controlled trials. One-dose pre-COVID vaccination did not have an effect on long COVID (number of studies = 10, summary OR = 1.01, 95% CI = 0.88–1.15, p-value = 0.896). Two-dose pre-COVID vaccination was associated with a 24% reduced odds of long COVID (number of studies = 15, summary OR = 0.76, 95% CI = 0.65–0.89, p-value = 0.001) and 4 symptoms (fatigue, headache, loss of smell, muscle pain) out of 10 symptoms analysed. The OR of three-dose pre-COVID vaccination against overall long COVID was statistically insignificant but was far away from 1 (number of studies = 3, summary OR = 0.31, 95% CI = 0.05–1.84, p-value = 0.198). One-dose post-COVID vaccination was associated with a 15% reduced odds of long COVID (number of studies = 5, summary OR = 0.85, 95% CI = 0.73–0.98, p-value = 0.024). The OR of two-dose post-COVID vaccination against long COVID was statistically insignificant but was far away from 1 (number of studies = 3, summary OR = 0.63, 95% CI = 0.38–1.03, p-value = 0.066).

Interpretation

Our study suggests that 2-dose pre-COVID vaccination and 1-dose post-COVID vaccination are associated with a lower risk of long COVID. Since long COVID reduces quality of life substantially, vaccination could be a possible measure to maintain quality of life by partially protecting against long COVID.
背景:长COVID影响着数百万人,并导致生活质量大幅下降。以往的主要研究和综述试图研究接种疫苗对长COVID的影响,但这些研究在长COVID的截止时间上各不相同。我们根据世界卫生组织对长COVID的定义,对COVID前和COVID后接种疫苗对长COVID的影响进行了系统回顾和荟萃分析:我们从 13 个数据库中获取了截至 2024 年 2 月 18 日的数据,包括同行评审和预印本研究。我们的纳入标准是(1)将长COVID定义为3个月或以上;(2)比较接种疫苗组和未接种疫苗组之间的长COVID症状;(3)受试者在感染COVID之前或之后接种疫苗;(4)明确参与者接种疫苗的剂量。我们提取了研究特征和数据,并使用 DerSimonian 和 Laird 随机效应模型计算了总的几率比(OR)。然后,我们根据主要疫苗品牌和长 COVID 评估方法进行了亚组分析。ROBINS-I 框架用于评估偏倚风险,GRADE 方法用于评估证据的确定性:我们纳入了 25 项观察性研究(n=14,128,260)的数据,其中没有随机对照试验。COVID前一剂疫苗接种对长COVID没有影响(研究数量=10,总OR=1.01,95% CI=0.88-1.15,P值=0.896)。接种两剂COVID前疫苗与长COVID几率降低24%有关(研究数=15,总OR=0.76,95% CI=0.65-0.89,P值=0.001),在分析的10种症状中,有4种症状(疲劳、头痛、嗅觉减退、肌肉疼痛)与长COVID几率降低有关。接种三剂 COVID 前疫苗对总长 COVID 的 OR 值在统计上不显著,但与 1 相差甚远(研究数量 = 3,总 OR = 0.31,95% CI = 0.05-1.84,p 值 = 0.198)。COVID后接种一剂疫苗与长COVID几率降低15%有关(研究数=5,总OR=0.85,95% CI=0.73-0.98,P值=0.024)。COVID后接种两剂疫苗预防长COVID的OR值在统计学上不显著,但与1相差甚远(研究数=3,汇总OR=0.63,95% CI=0.38-1.03,P值=0.066):我们的研究表明,接种前接种 2 剂 COVID 疫苗和接种后接种 1 剂 COVID 疫苗与较低的长 COVID 风险相关。由于长COVID会大大降低生活质量,接种疫苗可以部分预防长COVID,从而保持生活质量。
{"title":"The effect of pre-COVID and post-COVID vaccination on long COVID: A systematic review and meta-analysis","authors":"Nick King Ngai Chow ,&nbsp;Charmaine Yuk Wah Tsang ,&nbsp;Yan Hei Chan ,&nbsp;Shalina Alisha Telaga ,&nbsp;Lok Yan Andes Ng ,&nbsp;Chit Ming Chung ,&nbsp;Yan Ming Yip ,&nbsp;Peter Pak-Hang Cheung","doi":"10.1016/j.jinf.2024.106358","DOIUrl":"10.1016/j.jinf.2024.106358","url":null,"abstract":"<div><h3>Background</h3><div>Long COVID affects millions of people and results in a substantial decrease in quality of life. Previous primary studies and reviews attempted to study the effect of vaccination against long COVID, but these studies varied in the cut-off time of long COVID. We adhered to the WHO’s definition of long COVID and conducted a systematic review and meta-analysis on the effect of pre-COVID and post-COVID vaccination on long COVID.</div></div><div><h3>Methods</h3><div>We obtained data from 13 databases up to 18 February 2024, including peer reviewed and preprint studies. Our inclusion criteria were: (1) long COVID definition as 3 months or beyond, (2) comparing long COVID symptoms between vaccinated and unvaccinated groups, (3) subjects received vaccinations either before or after infected with COVID, (4) the number of doses received by participants was specified. We extracted study characteristics and data and computed the summary odds ratio (OR) with the DerSimonian and Laird random effects model. We then performed subgroup analyses based on the main vaccine brand and long COVID assessment method. ROBINS-I framework was used for assessment of risk of bias and the GRADE approach was used for evaluating the certainty of evidence.</div></div><div><h3>Findings</h3><div>We included data from 25 observational studies (n = 14,128,260) with no randomised controlled trials. One-dose pre-COVID vaccination did not have an effect on long COVID (number of studies = 10, summary OR = 1.01, 95% CI = 0.88–1.15, p-value = 0.896). Two-dose pre-COVID vaccination was associated with a 24% reduced odds of long COVID (number of studies = 15, summary OR = 0.76, 95% CI = 0.65–0.89, p-value = 0.001) and 4 symptoms (fatigue, headache, loss of smell, muscle pain) out of 10 symptoms analysed. The OR of three-dose pre-COVID vaccination against overall long COVID was statistically insignificant but was far away from 1 (number of studies = 3, summary OR = 0.31, 95% CI = 0.05–1.84, p-value = 0.198). One-dose post-COVID vaccination was associated with a 15% reduced odds of long COVID (number of studies = 5, summary OR = 0.85, 95% CI = 0.73–0.98, p-value = 0.024). The OR of two-dose post-COVID vaccination against long COVID was statistically insignificant but was far away from 1 (number of studies = 3, summary OR = 0.63, 95% CI = 0.38–1.03, p-value = 0.066).</div></div><div><h3>Interpretation</h3><div>Our study suggests that 2-dose pre-COVID vaccination and 1-dose post-COVID vaccination are associated with a lower risk of long COVID. Since long COVID reduces quality of life substantially, vaccination could be a possible measure to maintain quality of life by partially protecting against long COVID.</div></div>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106358"},"PeriodicalIF":14.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142695845","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Expanded immune imprinting and neutralization spectrum by hybrid immunization following breakthrough infections with SARS-CoV-2 variants after three-dose vaccination.
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-01 Epub Date: 2024-11-26 DOI: 10.1016/j.jinf.2024.106362
Tingting Jia, Fuxiang Wang, Yihao Chen, Guancheng Liao, Qiuyi Xu, Jiamin Chen, Jiani Wu, Nina Li, Liangliang Wang, Lifang Yuan, Dongli Wang, Qian Xie, Chuming Luo, Huanle Luo, Yanqun Wang, Yongkun Chen, Yuelong Shu

Background: Despite vaccination, SARS-CoV-2 evolution leads to breakthrough infections and reinfections worldwide. Knowledge of hybrid immunization is crucial for future broad-spectrum SARS-CoV-2 vaccines.

Methods: In this study, we investigated neutralizing antibodies (nAbs) against the SARS-CoV-2 ancestral virus (wild-type [WT]), pre-Omicron VOCs, Omicron subvariants, and SARS-CoV-1 using plasma collected from four distinct cohorts: individuals who received three doses of BBIBP-CorV/CoronaVac vaccines, those who experienced BA.5 breakthrough infections, those with XBB breakthrough infections, and those with BA.5-XBB consecutive infections following three-dose vaccination.

Findings: Following Omicron breakthrough infections, the levels of nAbs against WT and pre-Omicron VOCs were higher due to immune imprinting established by WT-based vaccination, in comparison to nAbs against Omicron variants. Interestingly, the XBB breakthrough infections elicited a broader neutralization spectrum against SARS-CoV-2 variants compared to the BA.5 breakthrough infections. This observation suggests that the XBB variant demonstrates superior immunogenicity relative to BA.5. Notably, hybrid immunization of BA.5 breakthrough infections after WT vaccination led to additional immune imprinting, resulting in a broadened neutralization profile against both WT and BA.5 variants in BA.5-XBB consecutive infections. However, the duration of nAbs was shorter in these reinfections compared to the breakthrough infections. Additionally, the expanded immune imprinting from previous WT vaccination and BA.5 breakthrough infections account for the enhanced plasma neutralization immunodominance observed in the antigenic cartography for BA.5-XBB consecutive infections.

Interpretation: Overall, we demonstrated a persistent and expanded effect of immune imprinting from prior SARS-CoV-2 exposures. Thus, future vaccines should specifically address the latest variants, and booster shots should be given at a longer interval after the previous infection or vaccination.

{"title":"Expanded immune imprinting and neutralization spectrum by hybrid immunization following breakthrough infections with SARS-CoV-2 variants after three-dose vaccination.","authors":"Tingting Jia, Fuxiang Wang, Yihao Chen, Guancheng Liao, Qiuyi Xu, Jiamin Chen, Jiani Wu, Nina Li, Liangliang Wang, Lifang Yuan, Dongli Wang, Qian Xie, Chuming Luo, Huanle Luo, Yanqun Wang, Yongkun Chen, Yuelong Shu","doi":"10.1016/j.jinf.2024.106362","DOIUrl":"10.1016/j.jinf.2024.106362","url":null,"abstract":"<p><strong>Background: </strong>Despite vaccination, SARS-CoV-2 evolution leads to breakthrough infections and reinfections worldwide. Knowledge of hybrid immunization is crucial for future broad-spectrum SARS-CoV-2 vaccines.</p><p><strong>Methods: </strong>In this study, we investigated neutralizing antibodies (nAbs) against the SARS-CoV-2 ancestral virus (wild-type [WT]), pre-Omicron VOCs, Omicron subvariants, and SARS-CoV-1 using plasma collected from four distinct cohorts: individuals who received three doses of BBIBP-CorV/CoronaVac vaccines, those who experienced BA.5 breakthrough infections, those with XBB breakthrough infections, and those with BA.5-XBB consecutive infections following three-dose vaccination.</p><p><strong>Findings: </strong>Following Omicron breakthrough infections, the levels of nAbs against WT and pre-Omicron VOCs were higher due to immune imprinting established by WT-based vaccination, in comparison to nAbs against Omicron variants. Interestingly, the XBB breakthrough infections elicited a broader neutralization spectrum against SARS-CoV-2 variants compared to the BA.5 breakthrough infections. This observation suggests that the XBB variant demonstrates superior immunogenicity relative to BA.5. Notably, hybrid immunization of BA.5 breakthrough infections after WT vaccination led to additional immune imprinting, resulting in a broadened neutralization profile against both WT and BA.5 variants in BA.5-XBB consecutive infections. However, the duration of nAbs was shorter in these reinfections compared to the breakthrough infections. Additionally, the expanded immune imprinting from previous WT vaccination and BA.5 breakthrough infections account for the enhanced plasma neutralization immunodominance observed in the antigenic cartography for BA.5-XBB consecutive infections.</p><p><strong>Interpretation: </strong>Overall, we demonstrated a persistent and expanded effect of immune imprinting from prior SARS-CoV-2 exposures. Thus, future vaccines should specifically address the latest variants, and booster shots should be given at a longer interval after the previous infection or vaccination.</p>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":" ","pages":"106362"},"PeriodicalIF":14.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142752201","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of two rapid host-response tests for distinguishing bacterial and viral infection in adults with acute respiratory infection 比较两种快速宿主反应试验,以区分急性呼吸道感染成人患者的细菌和病毒感染。
IF 14.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-12-01 DOI: 10.1016/j.jinf.2024.106360
Bilge Eylem Dedeoglu , Alex R. Tanner , Nathan J. Brendish , Helen E. Moyses , Tristan W. Clark

Objectives

Distinguishing bacterial from viral acute respiratory infection (ARI) is challenging, leading to inappropriate antimicrobial use and antimicrobial resistance. We evaluated the accuracy of two host-response tests to differentiate bacterial and viral infection.

Methods

This study used patient blood samples previously collected during a randomised controlled trial of adults hospitalised with ARI. The aetiology for each patient was clinically adjudicated. PAXgene blood RNA samples were tested using the TriVerity test (which measures 29 mRNAs) and serum samples were tested using the MeMed BV test (which measures 3 proteins). Diagnostic accuracy was calculated against adjudicated aetiology.

Results

169 patients were tested. Median age was 60 (45−74) years and 152 (90%) received antibiotics. 60 (36%) were adjudicated as bacterial, 54 (32%) as viral, 26 (15%) as viral/bacterial co-infection, and 29 (17%) as non-infected. For bacterial (including bacterial/viral co-infection) versus non-bacterial infection, the TriVerity bacterial score had a Positive Percentage Agreement (PPA) of 81% (95%CI 70–89) and a Negative Percentage Agreement (NPA) of 66% (95%CI 55–79) and the MeMed BV score had a PPA of 96% (95%CI 90–99) and NPA of 34% (95%CI 23–47). The AUROC for the two tests was 0.77 (95%CI 0.70–0.84) and 0.81 (95%CI 0.74–0.87) respectively, p = 0.388.

Conclusions

Both tests demonstrated similar overall accuracy for distinguishing bacterial infection with the Triverity test missing some bacterial infections and MeMed BV misclassifying most viral infections as bacterial. Prospective impact studies evaluating antibiotic use, safety and cost effectiveness are now required.
目的:区分细菌性和病毒性急性呼吸道感染(ARI)具有挑战性,会导致抗菌药使用不当和抗菌药耐药性。我们评估了两种宿主反应测试区分细菌和病毒感染的准确性:本研究使用了之前在一项随机对照试验中收集的患者血样,该试验针对的是因急性呼吸道感染住院的成人。每位患者的病因均由临床判定。PAXgene 血液 RNA 样本使用 TriVerity 检验(检测 29 种 mRNA),血清样本使用 MeMed BV 检验(检测 3 种蛋白质)。根据判定的病因计算诊断准确率:结果:169 名患者接受了检测。中位年龄为 60(45-74)岁,152(90%)人接受过抗生素治疗。60例(36%)被判定为细菌感染,54例(32%)为病毒感染,26例(15%)为病毒/细菌合并感染,29例(17%)为非感染。对于细菌感染(包括细菌/病毒合并感染)与非细菌感染,TriVerity 细菌评分的阳性一致率 (PPA) 为 81%(95%CI 70-89),阴性一致率 (NPA) 为 66%(95%CI 55-79);MeMed BV 评分的阳性一致率 (PPA) 为 96%(95%CI 90-99),阴性一致率 (NPA) 为 34%(95%CI 23-47)。两种测试的AUROC分别为0.77(95%CI 0.70-0.84)和0.81(95%CI 0.74-0.87),P=0.388:两种检验在区分细菌感染方面的总体准确性相似,Triverity 检验漏检了一些细菌感染,而 MeMed BV 则将大多数病毒感染误诊为细菌感染。现在需要进行前瞻性影响研究,评估抗生素的使用、安全性和成本效益。
{"title":"Comparison of two rapid host-response tests for distinguishing bacterial and viral infection in adults with acute respiratory infection","authors":"Bilge Eylem Dedeoglu ,&nbsp;Alex R. Tanner ,&nbsp;Nathan J. Brendish ,&nbsp;Helen E. Moyses ,&nbsp;Tristan W. Clark","doi":"10.1016/j.jinf.2024.106360","DOIUrl":"10.1016/j.jinf.2024.106360","url":null,"abstract":"<div><h3>Objectives</h3><div>Distinguishing bacterial from viral acute respiratory infection (ARI) is challenging, leading to inappropriate antimicrobial use and antimicrobial resistance. We evaluated the accuracy of two host-response tests to differentiate bacterial and viral infection.</div></div><div><h3>Methods</h3><div>This study used patient blood samples previously collected during a randomised controlled trial of adults hospitalised with ARI. The aetiology for each patient was clinically adjudicated. PAXgene blood RNA samples were tested using the TriVerity test (which measures 29 mRNAs) and serum samples were tested using the MeMed BV test (which measures 3 proteins). Diagnostic accuracy was calculated against adjudicated aetiology.</div></div><div><h3>Results</h3><div>169 patients were tested. Median age was 60 (45−74) years and 152 (90%) received antibiotics. 60 (36%) were adjudicated as bacterial, 54 (32%) as viral, 26 (15%) as viral/bacterial co-infection, and 29 (17%) as non-infected. For bacterial (including bacterial/viral co-infection) versus non-bacterial infection, the TriVerity bacterial score had a Positive Percentage Agreement (PPA) of 81% (95%CI 70–89) and a Negative Percentage Agreement (NPA) of 66% (95%CI 55–79) and the MeMed BV score had a PPA of 96% (95%CI 90–99) and NPA of 34% (95%CI 23–47). The AUROC for the two tests was 0.77 (95%CI 0.70–0.84) and 0.81 (95%CI 0.74–0.87) respectively, p = 0.388.</div></div><div><h3>Conclusions</h3><div>Both tests demonstrated similar overall accuracy for distinguishing bacterial infection with the Triverity test missing some bacterial infections and MeMed BV misclassifying most viral infections as bacterial. Prospective impact studies evaluating antibiotic use, safety and cost effectiveness are now required.</div></div>","PeriodicalId":50180,"journal":{"name":"Journal of Infection","volume":"89 6","pages":"Article 106360"},"PeriodicalIF":14.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142711738","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Journal of Infection
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