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Feeding live or processed black soldier fly larvae to slow-growing broilers impacts their behaviour differently 给生长缓慢的肉鸡喂活的或加工过的黑虻幼虫对它们的行为有不同的影响
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-02-01 DOI: 10.1016/j.animal.2025.101748
A. Dörper , K. Nicolai , G. Gort , I.C. de Jong , J. van Harn , T. Veldkamp , M. Dicke
In response to increasing public concerns and retailer demands, the broiler production industry and legislative authorities are looking for measures to improve broiler welfare. Black soldier fly (BSF) larvae could be used in broiler diets as these insects contain bioactive compounds that may improve broiler health. The underlying pathways of these bioactive compounds to support broiler health are not fully understood yet. However, experimental evidence indicates that BSF larvae as part of laying hen diets can lead to improved disease resistance and immune response in those chickens, based on improved blood biochemical profiles. Moreover, BSF larvae may trigger natural behaviour through visual cues, potentially stimulating natural foraging behaviour and pecking towards larvae. BSF larvae products (live and processed), varying in physical and nutritional properties, may affect broiler health and welfare differently based on product choice and inclusion level (low and high). The purpose of this study was to investigate whether BSF larvae products as part of slow-growing broiler (Hubbard JA757) diets or rations can contribute to better health and welfare. Therefore, the following BSF larvae products were tested at two inclusion levels: live larvae (L), a combination of BSF larvae meal and fat (MO) mimicking the nutritional composition of the live larvae, and BSF larvae meal (M) and fat (O) separately. Each treatment group was replicated 8 times with 24 broilers per replicate. The experimental diets were provided to the 1−day−old chickens until 51 days of age. The health of the broilers was quantified based on blood biochemical parameters and weight and length of intestinal organs, while the welfare of the broilers was quantified based on physical welfare scores, behavioural observations, and activity tracking. Feeding live BSF larvae to broilers affected their behaviour, leading to broilers showing more eating, locomotion, and active behaviour, while showing less resting and foraging behaviour compared to broilers receiving only compound feed with or without processed BSF larvae products. Biochemical blood parameters and dimensions of intestinal organs did not differ between the control group and treatment groups containing BSF larvae products. Based on our results, the insect product form, feeding live larvae rather than processed larvae, seems to stimulate eating and active behaviour in broilers, while inclusion level seems to play a less important role. We therefore recommend to use low quantities of live BSF larvae in broiler diets to improve activity in modern broiler production systems.
为了应对日益增加的公众关注和零售商的需求,肉鸡生产行业和立法机构正在寻求改善肉鸡福利的措施。黑兵蝇(Black soldier fly, BSF)幼虫含有可改善肉鸡健康的生物活性化合物,可用于肉鸡饲粮中。这些生物活性化合物支持肉鸡健康的潜在途径尚不完全清楚。然而,实验证据表明,基于改善的血液生化特征,将BSF幼虫作为蛋鸡日粮的一部分可以提高这些鸡的抗病能力和免疫反应。此外,BSF幼虫可能通过视觉线索触发自然行为,潜在地刺激自然觅食行为和啄幼虫。由于BSF幼虫产品(活的和加工的)具有不同的物理和营养特性,因此根据产品选择和添加水平(高和低)的不同,可能对肉鸡的健康和福利产生不同的影响。本研究旨在探讨在慢生长肉鸡(Hubbard JA757)饲粮或口粮中添加BSF幼虫产品是否有助于肉鸡的健康和福利。因此,本试验采用活仔鱼(L)、模仿活仔鱼营养组成的粉与脂肪组合(MO)和分别添加粉(M)和脂肪(O)两种添加水平,对以下两种BSF幼虫产品进行试验。每个处理组重复8次,每个重复24只肉鸡。试验饲粮饲喂1日龄鸡至51日龄。通过血液生化指标和肠道器官的体重和长度来量化肉鸡的健康状况,通过身体福利评分、行为观察和活动跟踪来量化肉鸡的福利状况。与只饲喂或不饲喂肉鸡加工过的肉鸡复合饲料相比,饲喂活的肉鸡幼虫会影响肉鸡的行为,导致肉鸡表现出更多的进食、运动和活跃行为,同时表现出更少的休息和觅食行为。血液生化指标和肠道脏器尺寸在两组间无显著差异。根据我们的研究结果,昆虫产品形式,即饲喂活的幼虫而不是加工过的幼虫,似乎可以刺激肉仔鸡的进食和活跃行为,而添加水平似乎起的作用不那么重要。因此,我们建议在现代肉鸡生产系统中,在肉鸡饲粮中使用少量的BSF活幼虫,以提高肉鸡的活性。
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引用次数: 0
Genomic insights into egg production in Mahuang chickens: identification of key loci and candidate genes through whole genome sequencing and validation 马黄鸡产蛋的基因组研究:通过全基因组测序和验证鉴定关键位点和候选基因
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-20 DOI: 10.1016/j.animal.2026.101762
F. Bordbar , J. Jensen , A.A. Wadood , E. Jebessa , B. Cai , Q. Nie
Genome-wide association studies provide a framework for identifying candidate genes linked to economically significant egg production traits in poultry. This study aimed to elucidate genetic variations influencing key egg production traits, specifically total number of eggs laid, number of eggs laid at 43 weeks, normal egg count, and normal egg rate in Mahuang chickens. Employing a low-coverage whole genome sequencing approach, we generated a comprehensive dataset encompassing 14 million imputed single−nucleotide polymorphisms (SNPs) from 647 individuals, complemented by high-depth sequencing (30×) of 40 chickens. To refine our association signals and address potential linkage disequilibrium (LD), we conducted conditional analyses by incorporating the most significant SNPs within each locus as fixed-effect covariates in the models. This approach allowed us to distinguish independent causal variants from those associated due to LD, leading to more accurate identification of true genetic effects. Our findings uncovered numerous novel SNPs and candidate genes, including the first reported rs7535083 in the LAMC2 gene, which introduces a missense variant (p.Gln726Arg) with potential implications for protein functionality and influence on egg production traits. Enrichment analyses identified significant candidate genes such as HEBP2, LAMC1, and LAMC2, integral to cellular proliferation pathways essential for ovarian follicle development and egg yield. Subsequent validation efforts included Kompetitive Allele Specific PCR (KASP) genotyping and quantitative real-time PCR (qRT-PCR) analysis. KASP assays successfully genotyped 9 out of 11 selected SNPs, confirming allele frequencies consistent with initial findings, particularly highlighting the rs318026917 SNP’s association with the total number of eggs laid. Concurrently, qRT-PCR analysis revealed significant expression variations among candidate genes, emphasising the pivotal roles of LAMC2 and RASA3 in egg production traits. Together, these results identify specific SNPs and candidate genes associated with egg production traits in Mahuang chickens, including a novel missense variant in LAMC2, and establish validated genetic targets for marker-assisted selection and further functional investigation.
全基因组关联研究为鉴定与家禽产蛋性状相关的候选基因提供了一个框架。本研究旨在阐明影响马黄鸡产蛋量关键性状的遗传变异,包括总产蛋量、43周龄产蛋量、正常产蛋量和正常产蛋率。采用低覆盖率全基因组测序方法,我们生成了一个综合数据集,其中包括来自647只鸡的1400万个输入单核苷酸多态性(SNPs),并辅以40只鸡的高深度测序(30倍)。为了完善我们的关联信号并解决潜在的连锁不平衡(LD),我们进行了条件分析,将每个位点内最显著的snp作为模型中的固定效应协变量。这种方法使我们能够将独立的因果变异与LD相关的变异区分开来,从而更准确地识别真正的遗传效应。我们的研究发现了许多新的snp和候选基因,包括LAMC2基因中首次报道的rs7535083,该基因引入了一个错义变体(p.Gln726Arg),可能对蛋白质功能和产蛋性状产生影响。富集分析确定了重要的候选基因,如HEBP2、LAMC1和LAMC2,它们是卵泡发育和卵子产量所必需的细胞增殖途径的组成部分。随后的验证工作包括竞争性等位基因特异性PCR (KASP)基因分型和实时定量PCR (qRT-PCR)分析。KASP分析成功地对11个选择的SNP中的9个进行了基因分型,证实了等位基因频率与最初的发现一致,特别强调了rs318026917 SNP与产卵总数的关联。同时,qRT-PCR分析显示候选基因之间存在显著的表达差异,强调了LAMC2和RASA3在产蛋性状中的关键作用。总之,这些结果确定了与马黄鸡产蛋性状相关的特定snp和候选基因,包括LAMC2的一个新的错义变异,并为标记辅助选择和进一步的功能研究建立了有效的遗传靶点。
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引用次数: 0
Incorporating genomic and transcriptomic effects in joint linear and non-linear structural models for predicting complex traits in pigs 结合基因组和转录组效应的联合线性和非线性结构模型预测猪的复杂性状
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-20 DOI: 10.1016/j.animal.2026.101765
I-T. Vourlaki, M. Piles, T. Jové-Juncà, Y. Ramayo-Caldas, R. Quintanilla, M. Ballester
Phenotypes in livestock are shaped by genetic variation as well as downstream regulatory mechanisms, making the prediction of complex traits a key challenge for animal breeding. Transcriptomic data represent an intermediate biological layer between genotypes and phenotypes and may capture regulatory signals not fully explained by genomic information alone. The objective of this study was to evaluate the contribution of blood transcriptomic data, alone or combined with genomic information, to predict six immune, stress, and production traits in 255 Duroc pigs. Four traits were closely related to the sampled tissue and timepoint, whereas two were less biologically relevant. Bayesian regression methods (BayesC and RKHS) and a neural network linear mixed model were compared using either all transcripts or subsets selected by Partial Least Squares (PLS). High prediction accuracy was obtained for immunity-related traits, such as gamma delta T cells and leukocyte counts, with correlations of 0.74 and 0.67, respectively, when transcriptomic data were used. Moderate improvements were observed for cortisol prediction (r = 0.39), whereas SNP-based models performed best for carcass weight (r = 0.45). PLS-based feature selection showed that a small subset of features can perform equally well or better than the whole transcriptomic dataset and identified biologically relevant candidate genes, including MAF, SOX13, DDIT4, and FOS. In conclusion, blood transcriptomic data substantially improved prediction performance for traits biologically related to the sampled tissue, whereas SNP-based models performed better for less relevant traits, and combining omics provided only modest and non-significant gains; feature selection was essential to enhance prediction performance, computational efficiency, and to facilitate the identification of immune-related candidate genes.
家畜的表型是由遗传变异和下游调控机制塑造的,这使得复杂性状的预测成为动物育种的一个关键挑战。转录组学数据代表了基因型和表型之间的中间生物学层,并可能捕获无法完全由基因组信息单独解释的调控信号。本研究的目的是评估血液转录组学数据的贡献,单独或结合基因组信息,以预测255头杜洛克猪的6种免疫、应激和生产性状。四个性状与取样组织和时间点密切相关,而两个性状的生物学相关性较低。贝叶斯回归方法(BayesC和RKHS)和神经网络线性混合模型使用所有转录本或偏最小二乘(PLS)选择的子集进行比较。当使用转录组数据时,对免疫相关性状(如γ δ T细胞和白细胞计数)的预测精度很高,相关性分别为0.74和0.67。皮质醇预测有中度改善(r = 0.39),而基于snp的模型对胴体重的预测效果最好(r = 0.45)。基于pls的特征选择表明,一小部分特征的表现与整个转录组数据集一样好,甚至更好,并确定了生物学相关的候选基因,包括MAF、SOX13、DDIT4和FOS。总之,血液转录组学数据大大提高了与样本组织生物学相关的性状的预测性能,而基于snp的模型在相关性较低的性状上表现更好,而结合组学只提供了适度和不显著的收益;特征选择对于提高预测性能、计算效率和促进免疫相关候选基因的识别至关重要。
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引用次数: 0
Genome-wide association study identified genomic regions and putative candidate genes affecting different backfat layers in Landrace pigs 全基因组关联研究确定了影响长白猪不同背膘层的基因组区域和可能的候选基因
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-20 DOI: 10.1016/j.animal.2026.101764
Z. Meng , Y. Liu , W. Yang , J. Wang , P.H. Li , R.H. Huang , W.J. Wu
Backfat thickness, a key selection trait in pig-breeding programmes, has traditionally been measured as a homogeneous layer. However, backfat is anatomically structured into three distinct layers, and each layer likely contributes differently to carcass quality. In addition, previous studies have shown that the deposition of the third layer of backfat is phenotypically correlated with intramuscular fat (IMF). Therefore, targeted selection for specific backfat layers, particularly the third layer, represents a potential strategy to increase IMF content while maintaining a high lean meat percentage. However, the genetic architecture of these distinct porcine backfat layers remains poorly understood. The aim of this study was to estimate the genetic parameters and identify key candidate genes underlying the three backfat layers. We collected B-mode ultrasound images from 561 Landrace pigs to measure individual layer thickness, followed by DNA extraction, genotyping, genetic parameter estimation, and a genome-wide association study (GWAS). Our measurements showed that the first layer of backfat (FBF) is the thickest, followed by the second (SBF) and the third (TBF) layers. Genetic parameter estimation yielded heritability estimates of 0.37, 0.42, 0.38, 0.34, 0.32, 0.24, and 0.21 for total backfat (BF), FBF, FBF/BF, SBF, SBF/BF, TBF, and TBF/BF, respectively. Through integrated analysis of GWAS, Bayesian fine-mapping, and gene annotation, we identified 15 non-redundant candidate genes associated with different backfat layers. These included two genes (SOAT1 and ACBD6) shared by BF and SBF, LPL for BF and FBF, and CAND1 for TBF and TBF/BF. Additionally, SERPINA12 and SERPINA6 were associated with BF; PRKAG1 and PRDM16 with FBF; EPRS1 and SLC39A10 with FBF/BF; PTGES and CRAT with SBF; and ACLY, CAVIN1, and PDZRN3 with SBF/BF. Our results indicate that each layer is governed by a distinct set of genes, which advances our understanding of the genetic basis of backfat layers in pigs.
背膘厚度是猪育种计划中的一个关键选择性状,传统上以均匀层来测量。然而,背膘在解剖学上分为三层,每一层对胴体质量的贡献可能不同。此外,已有研究表明,第三层背脂肪的沉积与肌内脂肪(IMF)具有表型相关性。因此,有针对性地选择特定的背膘层,特别是第三层,代表了在保持高瘦肉百分比的同时增加IMF含量的潜在策略。然而,这些不同的猪背膘层的遗传结构仍然知之甚少。本研究的目的是估计遗传参数并确定三个背膘层的关键候选基因。我们收集了561头长白猪的b超图像来测量个体层厚,随后进行DNA提取、基因分型、遗传参数估计和全基因组关联研究(GWAS)。我们的测量表明,第一层背膘(FBF)是最厚的,其次是第二层(SBF)和第三层(TBF)。遗传参数估计的总背膘(BF)、FBF、FBF/BF、SBF、SBF/BF、TBF和TBF/BF的遗传力分别为0.37、0.42、0.38、0.34、0.32、0.24和0.21。通过GWAS、贝叶斯精细定位和基因注释的综合分析,我们确定了15个与不同背膘层相关的非冗余候选基因。这些基因包括两个由BF和SBF共享的基因(SOAT1和ACBD6),由BF和FBF共享的LPL,以及由TBF和TBF/BF共享的CAND1。此外,SERPINA12和SERPINA6与BF相关;PRKAG1和PRDM16与FBF;EPRS1和SLC39A10的FBF/BF;PTGES和CRAT与SBF;ACLY、CAVIN1、PDZRN3与SBF/BF比值。我们的研究结果表明,每一层都是由一组不同的基因控制的,这促进了我们对猪背膘层遗传基础的理解。
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引用次数: 0
Evaluating a precision feeding decision support system for improving growth performance of growing-finishing pigs on a commercial farm 评价一种用于提高商业农场生长肥育猪生长性能的精确饲养决策支持系统
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-20 DOI: 10.1016/j.animal.2026.101763
V.L. Sacanell , L.M. Plà-Aragonés , J. Pomar
Optimisation of slaughter weight is crucial for efficient farm management in all-in-all-out systems, but growth variability within pig batches complicates uniform marketing. This study aimed to reduce heterogeneity by developing a decision support system (DSS) for precision feeding, improving BW performance, thereby reducing batch variability. A 103-day commercial trial involving 365 pigs compared conventional 3-phase feeding with individual precision feeding (IPF). Two control groups, Control A and Control B (n = 81 each, six pens/group), received diets with stepwise standardised ileal digestible lysine (SID Lys) concentrations (8.80, 9.80, 10.60 g/kg and 9.00, 10.00, 10.80 g/kg, respectively) from traditional feeders, with feed intake recorded manually. In contrast, the IPF group (n = 203, nine pens) utilised robotic feeders to provide individually tailored diets. These were formulated in real-time by blending high (11.83 g/kg) and low (6.59 g/kg) SID Lys feeds. A DSS, integrating a nutritional model, stakeholder directives (minimum and limited daily decreases in the SID Lys concentration), and a qualitative model, calculated each pig’s requirements based on automatically collected real-time BW and feed intake data. Performance metrics were similar across all groups. However, the IPF group (18.55 g/kg) was more efficient in utilising SID Lys, requiring less per kg of live weight gain than Control A (19.67 g/kg) and Control B (19.71 g/kg). When pigs were classified by initial BW – heavy (HBW, IPF: 26; Control A: 23; Control B: 20 animals), moderate (MBW, IPF: 98; Control A: 39; Control B: 41 animals) and light-body-weight (LBW, IPF: 79; Control A: 19; Control B: 20 animals) – the IPF group showed an improvement of 4.2–6.8 kg in growth performance for HBW, and 2.6–4.3 kg in LBW, compared to controls, although not statistically significant. While overall batch variability remained similar (CV: 11.6% IPF, 11.9% Control A, 12.2% Control B), the IPF group was more homogeneous among LBW pigs (9.5%) compared to controls (11.5% and 13.8%). Greater HBW variation in IPF group balanced overall variability. Although direct feed cost savings and nitrogen excretion reductions were not achieved – attributed to technical feed distribution issues in the final phase and higher CP baselines in the experimental diets – an economic estimation revealed that the system’s profitability was driven by output maximisation. In conclusion, the DSS proved feasible for real-time commercial application, successfully enhancing nutrient utilisation efficiency and optimising the growth of animals at the extremes of the population distribution.
在全统筹系统中,屠宰重量的优化对于有效的农场管理至关重要,但生猪批次的生长变异性使统一营销复杂化。本研究旨在通过开发决策支持系统(DSS)来减少异质性,从而提高体重性能,从而减少批次差异。一项为期103天的商业试验对365头猪进行了常规3期饲养与个体精确饲养(IPF)的比较。对照组A和对照组B各设81只,每组6只,饲喂逐步标准化回肠可消化赖氨酸(SID Lys)浓度(分别为8.80、9.80、10.60 g/kg和9.00、10.00、10.80 g/kg)的传统饲料,人工记录采食量。相比之下,IPF组(n = 203, 9只笔)使用机器人喂食器提供量身定制的饮食。通过混合高SID赖氨酸(11.83 g/kg)和低SID赖氨酸(6.59 g/kg)饲料实时配制。DSS综合了营养模型、利益相关者指令(SID Lys浓度每日最小和有限下降)和定性模型,根据自动收集的实时体重和采食量数据计算出每头猪的需水量。所有小组的绩效指标都是相似的。然而,IPF组(18.55 g/kg)对SID赖氨酸的利用效率更高,每公斤活增重所需的需要量低于对照A (19.67 g/kg)和对照B (19.71 g/kg)。将猪按初始体重分为重(HBW, IPF: 26;对照A: 23;对照B: 20头)、中等(MBW, IPF: 98;对照A: 39;对照B: 41头)和轻体重(LBW, IPF: 79;对照A: 19;对照B: 20头),与对照组相比,IPF组HBW的生长性能提高了4.2-6.8 kg, LBW提高了2.6-4.3 kg,但没有统计学意义。虽然整体批次变异性保持相似(变异系数:IPF组11.6%,对照组A组11.9%,对照组B组12.2%),但与对照组(11.5%和13.8%)相比,IPF组在LBW猪中更为均匀(9.5%)。IPF组HBW的较大变异平衡了总体变异。尽管由于最后阶段的技术饲料分配问题和实验日粮中较高的CP基线,未能实现直接的饲料成本节约和氮排泄减少,但经济估计显示,该系统的盈利能力是由产量最大化驱动的。综上所述,DSS被证明是可行的实时商业应用,成功地提高了养分利用效率,优化了动物在种群分布极端情况下的生长。
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引用次数: 0
The impact of lying down support on the lying down behaviour and piglet trapping in temporarily crated lactating sows. 躺卧支持对临时笼奶母猪躺卧行为和仔猪诱捕的影响。
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-16 DOI: 10.1016/j.animal.2026.101761
V Sekyrová, H Chaloupková, G Illmann

The housing of lactating sows remains a persistent animal welfare concern. Temporary crating may offer a compromise that supports the welfare of both sows and piglets in the farrowing pen. This study examined whether sows used lying-down supports (e.g. slope wall) before and after crate opening, and whether such use reduces the risk of piglet crushing. Nineteen healthy sows without any leg problems were housed in temporary farrowing crates from 5 days before farrowing until 3 days postpartum (pp), when crates were opened on the morning of day 4. The pen design included a slope wall angled at 18°, while the other wall, door, and nest barriers could also serve as supports. Sow and piglet behaviours were video-recorded for 24 h at three time points: 24 h before crate opening, 24 h after crate opening, and on day 25 pp. Analysed behaviours included the number and duration of lying-down events, use of supports, sow positions, and piglet positions in the pen and creep area. Continuous variables were analysed using linear mixed models accounting for repeated measures, and binomially distributed variables were evaluated using generalised linear mixed models. Following crate opening, sows significantly reduced their use of all supports compared with both the preopening period and day 25 pp, with nearly 34% of events occurring in the middle of the pen. Use of the slope wall declined significantly immediately after crate opening and decreased further by day 25. Lying-down events lasted longer when supports were used. Trapping events were rare (16 out of 1 539 lying-down events), with fatal crushing occurring in only four cases. These findings indicate that lying-down supports are not essential for preventing piglet crushing once the crate is removed; however, it is important to note that this applies only to healthy sows without mobility problems. Overall, releasing sows from close confinement does not appear to compromise piglet safety and may allow for more natural and maternal behaviours.

哺乳母猪的住房问题一直是动物福利问题。临时的板条箱可以提供一个折衷方案,支持母猪和仔猪在产房的福利。本研究考察了母猪在板条箱打开前后是否使用了躺卧支架(如坡墙),以及这种使用是否降低了仔猪被压伤的风险。19头没有腿部问题的健康母猪,从分娩前5天开始,一直饲养到产后3天(pp),第4天早上打开产房。围栏设计包括一个倾斜为18°的斜坡墙,而其他的墙、门和鸟巢屏障也可以作为支撑。在打开板条箱前24小时、打开板条箱后24小时和第25天三个时间点对母猪和仔猪的行为进行24小时的视频记录。分析的行为包括躺下事件的次数和持续时间、支架的使用、母猪的位置和仔猪在猪圈和蠕变区域的位置。使用线性混合模型分析重复测量的连续变量,使用广义线性混合模型评估二项分布变量。打开板条箱后,与打开前和第25天相比,母猪使用所有支架的次数显著减少,近34%的事件发生在猪圈中间。打开板条箱后,坡墙的使用率立即显著下降,并在第25天进一步下降。当使用支撑物时,躺下活动持续时间更长。诱捕事件很少见(1539例躺下事件中有16例),只有4例发生致命碾压。这些研究结果表明,一旦板条箱被移走,躺卧支撑对于防止仔猪被压死并不是必需的;然而,重要的是要注意,这只适用于没有流动性问题的健康母猪。总的来说,将母猪从封闭禁闭中释放出来似乎不会损害仔猪的安全,并且可能允许更多的自然和母性行为。
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引用次数: 0
Assessing genotype-by-environment interaction in dairy cattle in case of a wide range of production environments, unstructured crossbreeding and no pedigree information 在广泛的生产环境、非结构化杂交和没有系谱信息的情况下,评估奶牛基因型与环境的相互作用
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-16 DOI: 10.1016/j.animal.2026.101760
M. Spoelstra , G. Duguma , A. Ebro , J. van der Lee , J. ten Napel
Genetic variation in environmental sensitivity (ES) among breeds underscores the importance of accounting for genotype-by-environment (G × E) interactions in breeding programmes. This is especially true for countries where there is a large variation in location production systems and environmental conditions and where farms use crossbreeding. We present a systematic framework for assessing G × E by combining genomic reconstruction of an individual animal’s breed composition with characterisation of production environment diversity, using factor analysis of mixed data (FAMD) and linear mixed models. Data from 288 farms in Ethiopia were analysed as a case study, which included weekly performance records, household parameters, daily meteorological data, and genotypes from 780 crossbred cows. To test G × E, the following context parameters were considered: agroecological zone (AEZ), market proximity, and farm size. Results showed that the best performances for milk yield (MY), age at first calving (AFC), and calf BW were generally observed on large, urban farms. However, MY, number of services per conception (NSC), and AFC improved with increasing exotic ancestry up to about 60%, beyond which these traits levelled off or declined. Antagonistic relationships among performance traits and their interactions with breed composition were also observed. While MY, calf BW, and AFC generally improved with increasing exotic ancestry, NSC was negatively affected by some ancestral breeds. Specifically, Holsteins exhibited consistently high NSC (3.52–4.66 ± 1.12) across all AEZ and market proximities, highlighting a limitation of their use in crossbreeding strategies with respect to fertility. Our study demonstrates that breed−by−environment interactions can be assessed using field data and genotypes collected from crossbred animals in highly diverse production systems. However, the study design is inevitably unbalanced for breed composition, which limits the ability to assess the performance of breed combinations not well represented in the studied population.
品种间环境敏感性(ES)的遗传变异强调了在育种规划中考虑基因型-环境(gxe)相互作用的重要性。对于地点、生产系统和环境条件差异很大以及农场采用杂交育种的国家尤其如此。本研究利用混合数据因子分析(FAMD)和线性混合模型,将单个动物品种组成的基因组重建与生产环境多样性特征相结合,提出了一个评估gxe的系统框架。作为案例研究,对埃塞俄比亚288个农场的数据进行了分析,其中包括每周业绩记录、家庭参数、每日气象数据和780头杂交奶牛的基因型。为了检验G × E,考虑了以下环境参数:农业生态区(AEZ)、市场邻近程度和农场规模。结果表明,城市大型猪场在产奶量、初产犊龄和犊牛体重方面表现最佳。然而,随着外来血统的增加,MY、每胎服务数(NSC)和AFC提高了约60%,超过这一水平后,这些性状趋于平稳或下降。生产性能性状间的拮抗关系及其与品种组成的相互作用。随着外来血统的增加,MY、犊牛体重和AFC普遍提高,而NSC则受到某些祖先品种的负面影响。具体来说,荷斯坦在所有经济特区和市场附近都表现出一贯的高NSC(3.52-4.66±1.12),这突出了它们在杂交育种策略中使用育性方面的局限性。我们的研究表明,可以利用从高度多样化的生产系统中收集的杂交动物的田间数据和基因型来评估品种与环境的相互作用。然而,品种组成的研究设计不可避免地不平衡,这限制了评估在研究群体中没有很好代表的品种组合的性能的能力。
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引用次数: 0
Maternal sodium butyrate supplementation during mid-to-late gestation enhances antioxidant capacity and reduces inflammation in piglets. 妊娠中后期母体补充丁酸钠可提高仔猪抗氧化能力,减少炎症。
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-13 DOI: 10.1016/j.animal.2026.101756
C L Lu, Z F Fang, L Q Che, Y Lin, S Y Xu, Y Zhuo, L Hua, X M Jiang, M M Sun, G M Liu, Y Z Huang, D Wu, B Feng

Sodium butyrate (NaB) has been shown to enhance maternal antioxidant defences and improve reproductive outcomes; however, its long-term impact on offspring health requires further investigation. Our present study examined the effects of maternal dietary NaB supplementation during gestation on antioxidant and anti-inflammatory responses in neonatal and weaned piglets. Pregnant Landrace × Yorkshire sows were fed with a standard gestation diet supplemented with (NaB group) or without (control group) 0.2% NaB from gestational day 30 to day 114, while receiving the same diet during lactation. Serum and tissue samples were collected from newborn piglets at birth and from weaned piglets at weaning. Oxidative stress and inflammatory markers were quantified in sow placenta, as well as in the serum and intestinal tissues of piglets. Results showed that gestational NaB supplementation significantly increased the total antioxidant capacity and elevated the expression of glutathione peroxidase 4 (GPX4) and superoxide dismutase 2 (SOD2) in sow placenta (P < 0.05). Besides, catalase content (P = 0.073) and the mRNA levels of cytochrome P450 1A1 (CYP1A1) (P = 0.051) and gutamate-cysteine ligase catalytic subunit (GCLC) (P = 0.069) also tended to be higher in the placenta of the NaB group. Maternal NaB supplementation significantly increased serum catalase activity, decreased serum malondialdehyde concentration, and upregulated ileal GPX3 and GPX4 expression in newborn piglets (P < 0.05). In weaned piglets, maternal NaB supplementation decreased serum concentrations of interleukin-6 (IL-6) and tumor necrosis factor-α (TNF-α) while increasing jejunal relative weight, villus height and villus-to-crypt ratio (P < 0.05). Additionally, jejunal expression of G-protein coupled receptor 41 (GPR41) and Claudin 1 was markedly higher in the weaned piglets of NaB group than those in control group (P < 0.05). Collectively, these findings suggest that NaB supplementation during mid-to-late gestation could improve placental function in sows, which is associated with enhanced antioxidant capacity, attenuated inflammation, and improved intestinal development in the offspring.

丁酸钠(NaB)已被证明可以增强母体的抗氧化防御能力并改善生殖结果;然而,它对后代健康的长期影响需要进一步研究。本研究探讨了妊娠期母体饲粮中添加NaB对新生儿和断奶仔猪抗氧化和抗炎反应的影响。从妊娠第30天至第114天,在标准妊娠饲粮中添加(NaB组)或不添加(对照组)0.2% NaB,泌乳期饲喂相同的饲粮。从新生仔猪出生时和断奶仔猪断奶时采集血清和组织样本。对母猪胎盘、仔猪血清和肠道组织中的氧化应激和炎症标志物进行定量分析。结果表明,妊娠期添加NaB显著提高了母猪胎盘总抗氧化能力,提高了谷胱甘肽过氧化物酶4 (GPX4)和超氧化物歧化酶2 (SOD2)的表达
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引用次数: 0
Modulation of gut microbiota in rainbow trout by dietary protein-to-energy ratio and calcium carbonate through chyme and nutrient digestibility changes. 饲料蛋白能比和碳酸钙通过食糜和营养物质消化率变化对虹鳟鱼肠道微生物群的调节
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-13 DOI: 10.1016/j.animal.2026.101754
A Ruiz, E Ciavoni, M A J Nederlof, S Prakash, Ø Sæle, J W Schrama, F Kokou

Modulating feed buffering capacity via diet formulation is of increasing interest in livestock due to its ability to regulate gastrointestinal conditions and nutrient utilisation. This study hypothesises that dietary macronutrient composition and calcium carbonate (CaCO3) modulate fish gut microbiota, potentially improving the effects of feed buffering capacity. Thus, it explores the relationship between microbiota modulation and chyme changes induced by different protein-to-energy (P:E) ratios (16.1 vs 26.4 mg/kJ) and CaCO3 supplementation in diets of rainbow trout (Oncorhynchus mykiss, 284 ± 2.5 g). This multifactorial experiment also evaluated the effect of gut region (proximal vs distal) and postprandial time (3 vs 7 h). After a 6 week feeding trial, none of the tested factors showed differences in estimated microbial richness (Chao1 index, P > 0.05), while the proximal intestine exhibited higher microbial diversity (Simpson index) than the distal gut (P = 0.007). In addition, inter-individual microbial variability was significantly different between intestinal regions, qualitatively (Jaccard distance; F = 7.98, R2 = 0.05, P = 0.001) and quantitatively (Bray-Curtis distance; F = 96.19, R2 = 0.40, P = 0.001), which was correlated with differences in chyme pH, relative water and mineral fluxes, and CP apparent digestibility (P < 0.05). Jaccard distances also revealed different inter-individual microbial variability in fish fed the high P:E diet without CaCO3 addition (HP:E-LC) with respect to fish fed rest of the diets (F = 2.08, R2 = 0.01, P = 0.007), associated with magnesium digestibility (Pseudo-F = 1.47, P = 0.009). Furthermore, fish fed the high P:E diets showed a reduction in the relative abundance of the phylum Bacteroidota in both intestinal regions (P < 0.05), and of the genus Phaeodactylibacter in the proximal intestine (P = 0.002), which may reflect differences in the content of carbohydrates and lipids used as substrates by these taxa. Meanwhile, CaCO3 supplementation reduced the abundance of the phylum Desulfobacterota in the proximal intestine (P = 0.04), potentially due to its sensitivity to high pH values. Moreover, the genus Geobacillus was only present in the proximal intestine of fish fed the HP:E-LC diet and was positively correlated with magnesium digestibility (rs = 0.61, P = 0.01), supporting improved nutrient utilisation. In conclusion, both P:E ratio and CaCO3 supplementation modulate fish gut microbiota in correlation with changes in digestion kinetics induced by the diet macronutrient composition and feed buffering capacity, respectively, while maintaining the typical commensal microbiota of rainbow trout.

通过饲粮配方调节饲料缓冲能力正日益引起牲畜的兴趣,因为它能够调节胃肠道状况和养分利用。本研究假设,饲料中常量营养素组成和碳酸钙(CaCO3)可以调节鱼类肠道微生物群,从而可能提高饲料缓冲能力的效果。因此,本研究探讨了虹鳟鱼(Oncorhynchus mykiss, 284±2.5 g)饲粮中不同蛋白能比(P:E) (16.1 vs 26.4 mg/kJ)和CaCO3添加量对微生物群调节和食糜变化的影响。该多因素实验还评估了肠道区域(近端vs远端)和餐后时间(3 h vs 7 h)的影响。饲喂6周后,各试验因素对微生物丰富度的估计均无差异(Chao1指数,P < 0.05),而近端肠道的微生物多样性(Simpson指数)高于远端肠道(P = 0.007)。此外,不同肠道区域的个体间微生物变异在定性(Jaccard距离;F = 7.98, R2 = 0.05, P = 0.001)和定量(Bray-Curtis距离;F = 96.19, R2 = 0.40, P = 0.001),这与食糜pH、相对水分和矿物质通量、CP表观消化率(p3添加量(HP:E-LC)与其他饲料的差异(F = 2.08, R2 = 0.01, P = 0.007)和镁消化率(伪F = 1.47, P = 0.009)相关。此外,饲喂高磷比饲料的鱼在两个肠道区域都显示出拟杆菌门的相对丰度降低(添加磷降低了近端肠道中脱硫杆菌门的丰度(P = 0.04),可能是由于其对高pH值的敏感性。此外,Geobacillus属仅存在于饲喂HP:E-LC饲料的鱼的近端肠中,且与镁消化率呈正相关(rs = 0.61, P = 0.01),支持提高营养物质利用率。综上所述,P:E比和CaCO3的添加在维持虹鳟鱼典型共生菌群的同时,分别与饲料中常量营养成分和饲料缓冲能力引起的消化动力学变化相关。
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引用次数: 0
Maternal chromium supplementation increases lamb weaning weight and modulates rumen microbiota. 饲母添加铬可增加羔羊断奶体重并调节瘤胃微生物群。
IF 4.2 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-13 DOI: 10.1016/j.animal.2026.101755
A T Nunes, D L de Almeida, C A Faleiros, M D Poleti, E C de M Oliveira, F M Moreira, S B Gallo, H Fukumasu

Maternal nutrition during gestation can program offspring development and may influence the establishment of the rumen microbiome, with implications for growth and rumen health. However, the effects of maternal chromium (Cr) supplementation on offspring rumen microbial communities and performance in sheep remain poorly characterised. This study investigated the effects of maternal Cr supplementation during late gestation and early lactation on the offspring microbiome and performance in lambs. Fifteen pregnant ewes were assigned to two treatments in a randomised design: no Cr supplementation and 1.5 mg chromium propionate per ewe/day. Male Dorper × Santa Inês lambs (n = 19) were weaned at 80 d. They were provided creep feeding from 20 d to weaning, and finished in individual feedlot pens until slaughter at 132 d. The rumen microbiota of the offspring at slaughter was characterised. Feed intake, BW, daily gain, feed efficiency, and carcass yield were measured. Maternal Cr supplementation increased the weaning weight of lambs (P = 0.048), although no differences were observed in the feed intake, daily gain, or carcass weight. While the overall microbial diversity was unchanged, Cr increased Flexilinea (P = 0.042), SP3-e08 (P = 0.040) and U29-B03 (P = 0.037), genera linked to fibre degradation and volatile fatty acid modulation. Conversely, Cr reduced Streptococcus (P = 0.029), potentially lowering lactic acid accumulation and ruminal acidosis risk, and Oribacterium (P = 0.025) and Pseudobutyrivibrio (P = 0.008), genera involved in glycolysis and cell wall biosynthesis. In conclusion, supplementation with 1.5 mg chromium propionate during late gestation and early lactation increased lamb weaning weight and modulated rumen microbial taxa, suggesting potential improvements in nutrient utilisation and rumen stability.

妊娠期间的母体营养可以编程后代的发育,并可能影响瘤胃微生物群的建立,从而影响生长和瘤胃健康。然而,母体铬(Cr)补充对绵羊子代瘤胃微生物群落和生产性能的影响尚不清楚。本研究探讨了妊娠后期和哺乳期早期母体添加铬对羔羊子代微生物组和生产性能的影响。在随机设计中,15只怀孕母羊被分配到两种处理:不补充铬和每只母羊1.5 mg丙酸铬/天。雄性杜泊×圣诞老人Inês羔羊(n = 19)在80天断奶。从20天开始进行蠕变饲养至断奶,并在单独的饲养场围栏中完成饲养,直到132天屠宰。屠宰时子代瘤胃微生物群特征。测定采食量、体重、日增重、饲料效率和胴体产量。母体添加铬增加了羔羊的断奶重(P = 0.048),但对采食量、日增重和胴体重没有影响。在总体微生物多样性不变的情况下,Cr增加了与纤维降解和挥发性脂肪酸调节有关的柔线菌属(P = 0.042)、SP3-e08属(P = 0.040)和U29-B03属(P = 0.037)。相反,铬降低了链球菌(P = 0.029),潜在地降低了乳酸积累和瘤胃酸中毒的风险,以及参与糖酵解和细胞壁生物合成的Oribacterium (P = 0.025)和Pseudobutyrivibrio (P = 0.008)。综上所述,在妊娠后期和泌乳早期添加1.5 mg丙酸铬可提高羔羊断奶体重,调节瘤胃微生物群,可能提高营养物质利用率和瘤胃稳定性。
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