Animal最新文献

Many sport horse studbooks worldwide use microsatellite markers for parentage verification. However, many have expressed a desire to introduce genomic selection using genome-wide dense single nucleotide polymorphism (SNP) genotypes to complement their current breeding programmes. Hence, it does not make sense to genotype the same animal for both microsatellite markers and SNP markers. Transitioning to SNP-based parentage verification is an obvious solution but one barrier to this transition is the lack of SNP data on parents from which to verify parentage against. Therefore, the objective of this study was to assess the ability to impute the SNP genotype of a stallion from the genotypes of its progeny, with or without the consideration of the genotype of the progeny’s dam. Genotype information from 55 935 SNPs was available on 13 327 horses. A total of 98 stallions had genotype data on 10 progeny and the genotypes of these stallions were used as a test population. Genome-wide genotype imputation was undertaken by combining a family- and population-based imputation approach. Several different scenarios were assessed to quantify the ability to accurately impute the genotype of a stallion based on genotype data of incrementally more half-sibling progeny. Using genomic information from four progeny the average genotype concordance of the imputed sire genotype compared to the actual sire’s genotype was 0.932. The average genotype concordance rate increased to 0.960 when the genotypes of 10 progeny were included in the imputation process. The inclusion of the genotypes of the dams of the progeny improved the concordance rate from 0.932 to 0.977 when based on the genotype of just four progeny and their dams and from 0.960 to 0.996 when based on the genotype of 10 progeny and their dams. These results suggest it is possible to impute the genotype of a non-genotyped horse from the genotypes of its progeny and that the inclusion of the genotypes of the dams of the progeny improves this imputation accuracy further.

BW is an important economic trait in sheep that influences growth and development. Currently, most studies have used a single approach to screen genes associated with BW traits in sheep. To address this limitation, we conducted a genome-wide association study (GWAS) covering four different BW periods: birth, weaning, 6 months, and 12 months. Five new candidate genes: MAP3K1, ANKRD55, ABCB1, MEF2C and TRNAW-CCA-87 were screened using a combination of GWAS and quantitative trait loci analysis in sheep. Additionally, five genes were subjected to Gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses. These genes were primarily enriched in pathways related to growth hormone and energy metabolism. The results demonstrated that the above genes potentially influenced the growth and development of sheep. The five new candidate genes are closely related to the BW trait in sheep, which will be valuable for understanding the genetic mechanisms underlying BW traits and for guiding sheep breeding.

Alternative water disinfectants to chlorination need to be identified because its effectiveness is limited by water pH and potentially carcinogen by−products resulted from chlorination and organic compound reaction. The first study aimed to evaluate the effect of different drinking water chemical disinfection treatments on water quality, its potential hazard effects on animal health, water and feed consumption, and apparent total tract digestibility in dairy beef bulls fed high-concentrate diets. For 224 days, 24 Holstein bulls (176 ± 16.3 kg BW, and 149 ± 5.8 days of age) were individually assigned to one of four treatments with different drinking water chemical disinfectants: without disinfection (CTR); acidification and chlorination (ACCHL; 0.65 mL/L H₃PO₄ and 0.14 mL/L NaClO 15%); hydrogen peroxide (PER; 0.15 mL/L); and chlorine dioxide (DIO; 2.50 mL/L). Data were analysed with a mixed-effects model. Treatments affected the chemical characteristics of the water: in ACCHL, pH was 6.60 and free residual chlorine was 0.75 mg/L; in PER, H₂O₂ was 10.6 mg/L; and in DIO, ClO₂ was 0.52 mg/L. Water physicochemical quality parameters in all treatments were below maximal thresholds established for safe water consumption by the Water Safety Royal Decree (RD 140/2003). In addition, the total coliform count of treated waters was reduced (P = 0.01) compared with CTR; moreover, ACCHL and DIO treatments were more effective in reducing total coliform count than PER. Dry matter intake tended (P = 0.07) to increase in DIO compared with CTR. Treatments did not affect blood parameters nor apparent total tract digestibility. The second study aimed to evaluate the potential benefit on animal performance of two drinking water disinfectants under commercial conditions in dairy beef crossbred Holstein bulls fed high-concentrate diets. Ninety-six animals (307 ± 4.4 kg BW, and 224 ± 1.8 days of age) were allocated to six pens for 140 days and assigned to one of two treatments: ACCHL, most common water disinfectant, and DIO. Data were analysed with a mixed-effects model. Water total coliform count and water consumption were similar between treatments. Concentrate intake was greater (P = 0.02) in ACCHL for the last 14 study days. Growth performance and carcass quality were similar between treatments. In summary, acidification and chlorination, H₂O₂, and ClO₂ as drinking water disinfectants in dairy beef bulls had good disinfecting activity without detrimental effects on health and nutrient digestibility, and performance.

Seaweed silage has potential as an alternative feed ingredient for dairy cows. This study aims to investigate seaweed’s and seaweed silageś nutrient digestibility as well as their impact on the ruminal bacterial composition. The cultivated S. latissima and A. esculenta were preserved by freezing at − 40 °C or ensiling (16 °C, 3 months) with four different treatments: no additives, 4 g formic acid/kg wet seaweed, lactic acid bacteria (LAB) inoculant, and LAB inoculant in prewilted biomass (ca. 300 g DM/kg wet biomass). The nutrient digestibility was estimated using standard feed evaluation methods. The bacterial composition in ruminal fluid after 48 h in vitro anaerobic incubation with seaweeds and common feedstuffs was analysed using 16S ribosomal RNA (rRNA) amplicon sequencing (V3-V4) and quantitative PCR (qPCR). The results suggest that S. latissima was more digestible than A. esculenta and that the preservation treatments had only a small effect on the nutrient digestibility and ruminal bacteria compositions. The rumen DM degradability of S. latissima was comparable to common perennial and corn forage; however, the total tract CP digestibility of S. latissima (460 g/kg CP) was lower than common forages (620 – 820 g/kg CP) and was not improved by ensiling. There was a lack of insoluble but rumen−degradable CP in A. esculenta, making it unsuitable as a nutrient ingredient for dairy cows. The ruminal bacterial composition changed depending on the seaweed species used as substrate: The dominant bacterial taxa when incubated with S. latissima belonged to the genus Prevotella (relative abundance: 79 – 93%), known for its ability to degrade polysaccharides in various ecosystems. Moreover, the fibrolytic bacteria including Fibrobacter succinogenes and Ruminococcus flavefaciens were > 2.5 Log2FoldChange higher when incubating with S. latissima than with A. esculenta. These bacterial taxa may play an important role in the in vitro organic matter digestibility, noted as 2 times higher in S. latissima compared to A. esculenta. The qPCR results indicated potential methane mitigation properties of the studied seaweed species, with significantly lower gene copies of Archaea 16S rRNA and methyl coenzyme-M reductase subunit A genes when the ruminal fluid was incubated with the seaweed substrates. Our study suggested that ensiled S. latissima biomass can be included in the diet of dairy cows as an alternative forage-like ingredient with the potential of methane mitigation.

Methane (CH₄) from ruminant production systems produces greenhouse gases that contribute to global warming. Our goal was to determine whether monoammonium glycyrrhizinate could inhibit CH₄ emissions over the long term without affecting animal performance and immune indices in Karakul sheep. This study aimed to assess the effects of medium−term (60 days) addition of monoammonium glycyrrhizinate on growth performance, apparent digestibility, CH₄ emissions, methanogens, fibre-degrading bacteria and blood characteristics in Karakul sheep. Twelve male Karakul sheep (40.1 ± 3.59 kg) with fistula were randomly divided into two groups (n = 6): the Control group received a basal diet + the same volume of distilled water (30 ml) and the Treatment group received a basal diet + 8.75 g/kg monoammonium glycyrrhizinate injected via fistula. The adaptation stage was 15 days, and the measurement stage was 60 days. The sampling during the measurement stage was divided into two stages, stage I (1 ∼ 30 d) and stage II (31 ∼ 60 d). The results showed that monoammonium glycyrrhizinate significantly reduced the relative abundance of Bacteroides caccae, daily CH₄ emission and protozoa population, significantly increased the relative abundance of Lachnospiraceae bacterium AD3010, Lachnospiraceae bacterium FE2018, Lachnospiraceae bacterium NK3A20, Lachnospiraceae bacterium NK4A179 and Lachnospiraceae bacterium V9D3004 in stage I (P < 0.05); significantly increased the relative abundance of Lachnospiraceae bacterium AD3010, but significantly decreased the relative abundance of Lachnospiraceae bacterium NK4A179 and Lachnospiraceae bacterium C6A11 in stage II (P < 0.05). Therefore, monoammonium glycyrrhizinate could be used as a CH₄ inhibitor to limit the rumen CH₄ emissions of Karakul sheep in short−term period (30 days) without affecting the growth performance, fibre digestibility and blood parameters.

Rearing of replacement heifers makes up a significant part of the total costs in dairy farming. Nevertheless, the average age at first calving for dairy heifers still stays well above 2 years in many countries. This study examined the economic and environmental impacts of increased heifer growth rates and reduced replacement rates on Norwegian dairy farms. The current average growth rate in Norway (baseline scenario) was compared to an accelerated growth rate scenario. Within each of the two growth rate scenarios, we compared three different cow replacement rates. A farm account survey dataset containing physical and economic data on 311 Norwegian farms was clustered into three farm groups: small, medium, and large. To model economic consequences, we used the whole-farm linear programming model ScotFarm. A life cycle analysis model was used to model the environmental impacts of the baseline scenario and an accelerated growth rate scenario on the three farm groups. Accelerated heifer growth rate had a positive effect (14–28%) on farm annual gross margin depending on farm size. While accelerated growth rate resulted in only minor reductions in total emissions at farm level compared to the baseline scenario, reduced replacement rate lowered total farm level emissions by up to 8%, and emissions per unit of output by up to 6%. We conclude that an accelerated heifer growth rate scenario could potentially increase farm gross margin by some 14–28% compared with a baseline growth rate scenario. Reducing the replacement rate would be more efficient to reduce farm−level greenhouse gas emissions.

While several countries impose minimum light requirements for pig housing, it remains unknown whether these requirements are beneficial for pig welfare. Therefore, we aim to review the current knowledge on the effects of light on pig welfare. In this paper, we explain concepts defining light, discuss the relevance of vision for pigs and systematically review the effects of light on pig welfare. Systematic literature searches were performed in two databases to find studies about light and welfare-related topics, including behaviour, health, hormonal secretions and productivity. After screening, 63 studies were reviewed. According to literature, light is relevant in pigs’ lives as they are diurnal animals and use vision in combination with other senses to, for example, locate food and interact with conspecifics. Throughout this paper, the investigated light parameters are photoperiod, intensity and spectrum. Pigs seem to have p for a certain light intensity and spectrum, but these preferences vary over production phases. Photoperiod influences feed intake and growth, especially in piglets, but no conclusion can be drawn because of contradictory results. Furthermore, pigs’ activity patterns adapt to the provided light schedule and show a diurnal rhythm with higher activity during lit hours. Photoperiod also plays a role in the diurnal secretion of hormones. Cortisol secretion increases shortly before the moment of light onset, and melatonin secretion is influenced by the light and dark contrast with a nocturnal rise after light offset. Some behaviours are impacted by light intensity; for instance, dim conditions are associated with resting and bright conditions with elimination behaviour. Moreover, a few studies showed that in dimmer conditions, more negative social interactions occur, while brighter conditions lead to more positive interactions. Lastly, even though light spectrum is the least explored light parameter, several studies showed that UV B light can activate the cutaneous synthesis of vitamin D₃. A limitation in the current literature is that several studies tested light treatments differing in more than one light parameter, making the interpretation of each light parameter difficult. Moreover, most studies do not provide information on other light parameters not targeted by the study, particularly on light spectrum. Some clear knowledge gaps that emerged from this review are on light spectrum and on affective states of pigs in relation to light.

Weaning is a decisive event in piglets’ life. This study aimed to evaluate whether the inclusion of fish oil, rich in eicosapentaenoic and docosahexaenoic acids (EPA and DHA), in sow and piglet diets, increased the concentration of anti-inflammatory molecules in the blood of weaned piglets and whether the effect was dependent on the pigs being born with either low or a high birth BW (bBW). Thirty-six sows in four consecutive batches were randomly distributed between a control diet with animal fat (15 g/kg in gestation and 30 g/kg in lactation) or a n-3 long-chain fatty acid diet (LCFA; totally or half replacing animal fat by fish oil during gestation and lactation, respectively) from service until weaning (ca. 28 days). At birth, the two lightest (LBW) and the two heaviest (HBW) piglets in each litter were identified and, at weaning, grouped in pens by pairs prioritising their bBW. Pens were further distributed into a control (30 g/kg animal fat) or n-3 LCFA diet (totally replacing animal fat by fish oil) for 28 days. At the end of the trial, blood was collected from piglets in the first batch (n = 48). Serum fatty acids (FAs) were quantified by GC, plasma oxylipins by ultra-HPLC-MS, and plasma immune indicators by ELISA. An interaction between piglet diet and bBW for average daily gain (P = 0.020) and average daily feed intake (P = 0.014) during the whole postweaning indicated that dietary n-3 LCFA−promoted LBW piglets to have a similar growth and intake than HBW piglets reaching 1.5 kg average BW more at the end of the postweaning period than LBW control piglets. Fish oil in piglet diets also increased the concentrations of total n-3 FA, EPA and DHA (all P < 0.001), their resultant oxylipins, particularly their hydroxy derivatives from lipoxygenase enzymatic pathway (all P < 0.001) and tended to increase immunoglobulin M (P = 0.067) in blood. Regarding the bBW category, LBW piglets tend to increase tumour necrosis factor α in plasma (P = 0.083) compared to HBW. It is concluded that fish oil in postweaning diets could enhance the daily gain and feed intake of LBW piglets, increasing the concentration of serum n-3 FAs and their derived oxylipins in plasma.