Pub Date : 2026-01-19DOI: 10.1016/j.drup.2026.101358
Shuyao Zhu , Feiyu Yu , Bingqing Yang , Miao Zhang , Haijie Zhang , Zhiqiang Wang , Yuan Liu
Plasmid-mediated conjugative transfer drives the global dissemination of antimicrobial resistance, posing a global threat to public health. Besides extruding antibiotics, bacterial multidrug efflux pumps modulate virulence, yet their influence on resistance plasmid spread in antibiotic-free settings remains undefined. Herein, we demonstrate that the AcrAB-TolC efflux pump is critical for the horizontal transfer of model plasmid RP4–7 and diverse clinical resistance plasmids. Single deletions of acrA, acrB or tolC significantly reduce plasmid transfer, and complementation fully restores conjugative frequencies to control levels. Mechanistic investigations reveal that acrB deficiency reduces interbacterial contact, diminishes energy metabolism, and impairs activity of the glutamate decarboxylase, quorum sensing and the conjugative systems. Furthermore, we identify chlorpromazine as a potential AcrB ligand, which blocks plasmid transfer both in vivo and in vitro. Collectively, our findings reveal the role of efflux pumps in plasmid transfer and underscore AcrB as a druggable target to curtail the spread of antibiotic resistance.
{"title":"Deciphering the roles of AcrAB-TolC efflux pump in promoting the transmission of antibiotic resistance","authors":"Shuyao Zhu , Feiyu Yu , Bingqing Yang , Miao Zhang , Haijie Zhang , Zhiqiang Wang , Yuan Liu","doi":"10.1016/j.drup.2026.101358","DOIUrl":"10.1016/j.drup.2026.101358","url":null,"abstract":"<div><div>Plasmid-mediated conjugative transfer drives the global dissemination of antimicrobial resistance, posing a global threat to public health. Besides extruding antibiotics, bacterial multidrug efflux pumps modulate virulence, yet their influence on resistance plasmid spread in antibiotic-free settings remains undefined. Herein, we demonstrate that the AcrAB-TolC efflux pump is critical for the horizontal transfer of model plasmid RP4–7 and diverse clinical resistance plasmids. Single deletions of <em>acrA</em>, <em>acrB</em> or <em>tolC</em> significantly reduce plasmid transfer, and complementation fully restores conjugative frequencies to control levels. Mechanistic investigations reveal that <em>acrB</em> deficiency reduces interbacterial contact, diminishes energy metabolism, and impairs activity of the glutamate decarboxylase, quorum sensing and the conjugative systems. Furthermore, we identify chlorpromazine as a potential AcrB ligand, which blocks plasmid transfer both <em>in vivo</em> and <em>in vitro</em>. Collectively, our findings reveal the role of efflux pumps in plasmid transfer and underscore AcrB as a druggable target to curtail the spread of antibiotic resistance.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101358"},"PeriodicalIF":21.7,"publicationDate":"2026-01-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146000949","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-12DOI: 10.1016/j.drup.2026.101356
Caoqinglong Huang , Xunzhen Zheng , Qingbin Cui , Robert C. Peery , Zizheng Dong , Xiaohong Li , Jing-Yuan Liu , Jian-Ting Zhang
Survivin, a homodimeric protein in the Inhibitor of Apoptosis Protein (IAP) family, plays a dual role in apoptosis inhibition and cell cycle regulation. Overexpressed in many cancers but absent in most adult tissues, survivin is a compelling therapeutic target linked to disease progression, aggressiveness, and drug resistance. However, its structural properties render it “undruggable” by conventional approaches. Here, we present a transformative strategy to overcome this challenge by targeting survivin’s hydrophobic dimerization interface, inducing proteasome-dependent degradation. Building on the initial discovery of the survivin degrader LQZ-7I, we developed optimized analogs with significantly enhanced potency through medicinal chemistry. Our top-performing compounds, 7I10 and 7I14, selectively disrupt survivin dimerization, leading to its degradation and spontaneous apoptosis in castration-resistant prostate cancer (CRPC) cells. We also showed that survivin contributes to acquired resistance to docetaxel, the frontline chemotherapy for metastatic CRPC, and that the survivin degraders exhibit potent synergy with docetaxel, and the combination of 7I14 and docetaxel synergistically eliminates CRPC xenografts without added toxicity. This work introduces a first-in-class therapeutic approach that overcomes long-standing barriers to drugging survivin, offering a new avenue for combating docetaxel-resistant metastatic CRPC. With robust efficacy, a favorable safety profile, and potential for clinical translation, 7I10 and 7I14 represent significant advancements in the development of targeted cancer therapies to overcome docetaxel resistance.
Survivin是凋亡抑制蛋白(inhibitor of apoptosis protein, IAP)家族中的一种二聚体蛋白,具有抑制细胞凋亡和调节细胞周期的双重作用。survivin在许多癌症中过表达,但在大多数成人组织中不表达,是与疾病进展、侵袭性和耐药性相关的令人信服的治疗靶点。然而,它的结构特性使其在传统方法中“不可吸毒”。在这里,我们提出了一种变革策略,通过靶向survivin的疏水二聚化界面,诱导蛋白酶体依赖性降解来克服这一挑战。在初步发现的survivin降解剂LQZ-7I的基础上,我们通过药物化学方法开发了具有显著增强效价的优化类似物。我们表现最好的化合物7I10和7I14选择性地破坏survivin二聚化,导致其在去势抵抗性前列腺癌(CRPC)细胞中降解和自发凋亡。我们还表明,survivin有助于对多西他赛(用于转移性CRPC的一线化疗药物)的获得性耐药,survivin降解物与多西他赛表现出强大的协同作用,7I14和多西他赛联合可协同消除CRPC异种移植物,而不会增加毒性。这项工作介绍了一种一流的治疗方法,克服了长期存在的生存素药物障碍,为对抗多西他赛耐药转移性CRPC提供了新的途径。7I10和7I14具有强大的疗效,良好的安全性和临床转化潜力,代表了靶向癌症治疗发展的重大进展,以克服多西他赛耐药。
{"title":"Novel quinoxaline-based survivin degraders overcome docetaxel-resistance in castration-resistant prostate cancer","authors":"Caoqinglong Huang , Xunzhen Zheng , Qingbin Cui , Robert C. Peery , Zizheng Dong , Xiaohong Li , Jing-Yuan Liu , Jian-Ting Zhang","doi":"10.1016/j.drup.2026.101356","DOIUrl":"10.1016/j.drup.2026.101356","url":null,"abstract":"<div><div>Survivin, a homodimeric protein in the Inhibitor of Apoptosis Protein (IAP) family, plays a dual role in apoptosis inhibition and cell cycle regulation. Overexpressed in many cancers but absent in most adult tissues, survivin is a compelling therapeutic target linked to disease progression, aggressiveness, and drug resistance. However, its structural properties render it “undruggable” by conventional approaches. Here, we present a transformative strategy to overcome this challenge by targeting survivin’s hydrophobic dimerization interface, inducing proteasome-dependent degradation. Building on the initial discovery of the survivin degrader LQZ-7I, we developed optimized analogs with significantly enhanced potency through medicinal chemistry. Our top-performing compounds, 7I10 and 7I14, selectively disrupt survivin dimerization, leading to its degradation and spontaneous apoptosis in castration-resistant prostate cancer (CRPC) cells. We also showed that survivin contributes to acquired resistance to docetaxel, the frontline chemotherapy for metastatic CRPC, and that the survivin degraders exhibit potent synergy with docetaxel, and the combination of 7I14 and docetaxel synergistically eliminates CRPC xenografts without added toxicity. This work introduces a first-in-class therapeutic approach that overcomes long-standing barriers to drugging survivin, offering a new avenue for combating docetaxel-resistant metastatic CRPC. With robust efficacy, a favorable safety profile, and potential for clinical translation, 7I10 and 7I14 represent significant advancements in the development of targeted cancer therapies to overcome docetaxel resistance.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101356"},"PeriodicalIF":21.7,"publicationDate":"2026-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145956675","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-12DOI: 10.1016/j.drup.2026.101355
Muhammad Tufail , Kunxiang Gong , Bushra Ijaz , Harsh Patel , Weng-Onn Lui , Xiumei Wang , Jie Li
Oncogenic signal transduction pathways play pivotal roles in tumor progression by regulating essential cellular processes such as proliferation, survival, angiogenesis, invasion, and immune evasion. These pathways are frequently deregulated in cancer due to genetic mutations, epigenetic modifications, or microenvironmental influences. These genetic or epigenetics shifts enable cancer cells to bypass growth suppressors, resist apoptosis, and sustain uncontrolled growth. While targeted therapies have shown promise in inhibiting these signaling cascades, therapeutic resistance and tumor heterogeneity remain major obstacles. To address these limitations, emerging strategies, including combination therapies, next-generation kinase inhibitors, and immunomodulatory approaches, are being developed to overcome these challenges. This review explores the molecular mechanisms underlying oncogenic pathway activation, their contributions to hallmark cancer traits and resistance, and therapeutic advancements targeting these pathways. By understanding these signaling networks, we aim to highlight opportunities for improving cancer treatment and addressing therapeutic resistance in the evolving landscape of oncology.
{"title":"The hallmarks of oncogenic signaling: From pathways to resistance in cancer therapy","authors":"Muhammad Tufail , Kunxiang Gong , Bushra Ijaz , Harsh Patel , Weng-Onn Lui , Xiumei Wang , Jie Li","doi":"10.1016/j.drup.2026.101355","DOIUrl":"10.1016/j.drup.2026.101355","url":null,"abstract":"<div><div>Oncogenic signal transduction pathways play pivotal roles in tumor progression by regulating essential cellular processes such as proliferation, survival, angiogenesis, invasion, and immune evasion. These pathways are frequently deregulated in cancer due to genetic mutations, epigenetic modifications, or microenvironmental influences. These genetic or epigenetics shifts enable cancer cells to bypass growth suppressors, resist apoptosis, and sustain uncontrolled growth. While targeted therapies have shown promise in inhibiting these signaling cascades, therapeutic resistance and tumor heterogeneity remain major obstacles. To address these limitations, emerging strategies, including combination therapies, next-generation kinase inhibitors, and immunomodulatory approaches, are being developed to overcome these challenges. This review explores the molecular mechanisms underlying oncogenic pathway activation, their contributions to hallmark cancer traits and resistance, and therapeutic advancements targeting these pathways. By understanding these signaling networks, we aim to highlight opportunities for improving cancer treatment and addressing therapeutic resistance in the evolving landscape of oncology.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101355"},"PeriodicalIF":21.7,"publicationDate":"2026-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145956676","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-08DOI: 10.1016/j.drup.2026.101354
Marco Pieraccioli , Alessandra Ciucci , Christian Corti , Roberta Mastrantonio , Eleonora Kristina Scarpone , Eleonora Cesari , Alessia Piermattei , Angelo Minucci , Andrea Urbani , Floriana Camarda , Anna Fagotti , Luca Tamagnone , Giovanni Scambia , Camilla Nero , Claudio Sette
Aim
High grade serous ovarian cancer (HGSOC) is the most aggressive subtype of ovarian cancer. HGSOC is characterized by high inter- and intra-tumoral heterogeneity, which contributes to chemotherapy resistance. Patient-derived organoids (PDOs) are valuable preclinical models to elucidate the biology of human cancers and to test their response to treatments. This study aims at characterizing the cellular heterogeneity of PDOs and to uncover vulnerabilities of chemotherapy resistant HGSOC.
Methods
Single-cell transcriptomics of PDOs developed from biopsies of platinum-resistant and platinum-sensitive HGSOC. Chemotherapeutic treatments of HGSOC PDOs and of ascitic-derived ovarian cancer cells and immunohistochemistry analyses of tissues from independent HGSOC patients.
Results
HGSOC PDOs comprise subclusters of cells exhibiting different transcriptional states and patient-specific signatures. Proliferative and non-proliferative subclusters co-exist in PDOs and their relative proportion is altered by chemotherapy. Proliferative cell sub-populations exhibit expression of cell cycle and DNA damage response related genes, whereas non-proliferative sub-populations display inflammatory signatures. Furthermore, sensitivity to platinum-based treatments was inversely correlated with oxidative phosphorylation (OXHPOS) in PDOs, indicating a metabolic switch associated with chemoresistance. Accordingly, platinum-resistant PDOs and ascitic HGSOC cells show higher sensitivity to OXHPOS inhibition. We found that neoadjuvant chemotherapy (NACT) directly up-regulates oncogenic and metabolic pathways that are involved in development of recurrence, such as the MYC and OXPHOS genes. NACT also induces the expression of major histocompatibility complex type II (MHC-II) molecules. Immunohistochemistry confirmed MHC-II up-regulation in post-NACT biopsies, indicating that tumour cells mount a general antigen-presenting response upon chemotherapy, associated with recruitment of infiltrating immune cells.
Conclusion
PDOs maintain the inter- and intra-tumoral cellular heterogeneity of HGSOC. Chemotherapy targets proliferative cell subclusters, sparing non-proliferative ones. Dependency on OXPHOS represents an actionable vulnerability in PDOs, which can be exploited to hijack chemoresistance. Sequential chemotherapy and immunotherapy may also improve clinical response of HGSOC patients.
{"title":"Single-cell transcriptome analysis of patient-derived organoids captures inter- and intratumor heterogeneity and uncovers targetable pathways in high grade serous ovarian cancer","authors":"Marco Pieraccioli , Alessandra Ciucci , Christian Corti , Roberta Mastrantonio , Eleonora Kristina Scarpone , Eleonora Cesari , Alessia Piermattei , Angelo Minucci , Andrea Urbani , Floriana Camarda , Anna Fagotti , Luca Tamagnone , Giovanni Scambia , Camilla Nero , Claudio Sette","doi":"10.1016/j.drup.2026.101354","DOIUrl":"10.1016/j.drup.2026.101354","url":null,"abstract":"<div><h3>Aim</h3><div>High grade serous ovarian cancer (HGSOC) is the most aggressive subtype of ovarian cancer. HGSOC is characterized by high inter- and intra-tumoral heterogeneity, which contributes to chemotherapy resistance. Patient-derived organoids (PDOs) are valuable preclinical models to elucidate the biology of human cancers and to test their response to treatments. This study aims at characterizing the cellular heterogeneity of PDOs and to uncover vulnerabilities of chemotherapy resistant HGSOC.</div></div><div><h3>Methods</h3><div>Single-cell transcriptomics of PDOs developed from biopsies of platinum-resistant and platinum-sensitive HGSOC. Chemotherapeutic treatments of HGSOC PDOs and of ascitic-derived ovarian cancer cells and immunohistochemistry analyses of tissues from independent HGSOC patients.</div></div><div><h3>Results</h3><div>HGSOC PDOs comprise subclusters of cells exhibiting different transcriptional states and patient-specific signatures. Proliferative and non-proliferative subclusters co-exist in PDOs and their relative proportion is altered by chemotherapy. Proliferative cell sub-populations exhibit expression of cell cycle and DNA damage response related genes, whereas non-proliferative sub-populations display inflammatory signatures. Furthermore, sensitivity to platinum-based treatments was inversely correlated with oxidative phosphorylation (OXHPOS) in PDOs, indicating a metabolic switch associated with chemoresistance. Accordingly, platinum-resistant PDOs and ascitic HGSOC cells show higher sensitivity to OXHPOS inhibition. We found that neoadjuvant chemotherapy (NACT) directly up-regulates oncogenic and metabolic pathways that are involved in development of recurrence, such as the <em>MYC</em> and OXPHOS genes. NACT also induces the expression of major histocompatibility complex type II (MHC-II) molecules. Immunohistochemistry confirmed MHC-II up-regulation in post-NACT biopsies, indicating that tumour cells mount a general antigen-presenting response upon chemotherapy, associated with recruitment of infiltrating immune cells.</div></div><div><h3>Conclusion</h3><div>PDOs maintain the inter- and intra-tumoral cellular heterogeneity of HGSOC. Chemotherapy targets proliferative cell subclusters, sparing non-proliferative ones. Dependency on OXPHOS represents an actionable vulnerability in PDOs, which can be exploited to hijack chemoresistance. Sequential chemotherapy and immunotherapy may also improve clinical response of HGSOC patients.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101354"},"PeriodicalIF":21.7,"publicationDate":"2026-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145925904","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-06DOI: 10.1016/j.drup.2026.101353
Baris Cerci , Ozge Saatci , Mark Basik , Ozgur Sahin
Antibody-drug conjugate (ADC) is a drug modality where a payload is conjugated to an antibody for its targeted delivery to the cancer cells. In breast cancer, the treatment landscape has changed remarkably in the past decade by the introduction of several effective ADCs in the clinic. However, intrinsic (de novo) or acquired resistance to these treatments is a major obstacle. In this review, we summarize the role of target antigen alterations, cell-intrinsic mechanisms that overcome payload cytotoxicity, and the pro-tumorigenic tumor microenvironment (TME) as the major drivers of resistance to ADCs. Furthermore, we discuss how different mechanisms of ADC resistance are integrated and highlight the most clinically relevant ones. We then provide the current and emerging strategies, such as biomarker-guided drug combinations and novel ADC designs to overcome resistance to ADCs. Finally, we provide future perspectives on the use of preclinical models that better reflect both intratumor heterogeneity and TME, integration of exploratory biomarker analysis through multi-omics of patient biopsies in prospective clinical trials, and development of new ADCs, e.g., bispecific ADCs and identification of novel antigens and/or payloads, to overcome ADC resistance.
{"title":"Mechanisms of resistance to antibody-drug conjugates in breast cancer","authors":"Baris Cerci , Ozge Saatci , Mark Basik , Ozgur Sahin","doi":"10.1016/j.drup.2026.101353","DOIUrl":"10.1016/j.drup.2026.101353","url":null,"abstract":"<div><div>Antibody-drug conjugate (ADC) is a drug modality where a payload is conjugated to an antibody for its targeted delivery to the cancer cells. In breast cancer, the treatment landscape has changed remarkably in the past decade by the introduction of several effective ADCs in the clinic. However, intrinsic (de novo) or acquired resistance to these treatments is a major obstacle. In this review, we summarize the role of target antigen alterations, cell-intrinsic mechanisms that overcome payload cytotoxicity, and the pro-tumorigenic tumor microenvironment (TME) as the major drivers of resistance to ADCs. Furthermore, we discuss how different mechanisms of ADC resistance are integrated and highlight the most clinically relevant ones. We then provide the current and emerging strategies, such as biomarker-guided drug combinations and novel ADC designs to overcome resistance to ADCs. Finally, we provide future perspectives on the use of preclinical models that better reflect both intratumor heterogeneity and TME, integration of exploratory biomarker analysis through multi-omics of patient biopsies in prospective clinical trials, and development of new ADCs, e.g., bispecific ADCs and identification of novel antigens and/or payloads, to overcome ADC resistance.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101353"},"PeriodicalIF":21.7,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145925903","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-05DOI: 10.1016/j.drup.2026.101352
Lijun Fang , Rongfeng Fu , Huan Dong , Wenhui Zhang , Yuchen Gao , Yanmei Xu , Wenjing Gu , Zixuan Liu , Huiyuan Li , Wentian Wang , Xiaolei Pei , Ying Chi , Yuan Zhou , Jun Wei , Ying Wang , Lei Zhang
Aims
To define JAK2v617f-induced immune alterations, focusing on STAT3-mediated dendritic cell dysfunction, and evaluate whether IFNα2b restores anti-tumor immunity in JAK2v617f-positive myeloproliferative neoplasms.
Methods
Integrated flow cytometry and single-cell RNA sequencing profiled immune landscapes and signaling pathways, while functional assays assessed dendritic cell differentiation, T cell activation, and IFNα2b-mediated immune restoration.
Results
JAK2v617f was associated with increased STAT3 activation in myeloid cells, accompanied by elevated expression of immunosuppressive mediators such as FGL2, impaired monocyte-to-DC differentiation, reduced cDC1/cDC2 subsets, and diminished T cell activation, consistent with an immunosuppressive immune landscape. IFNα2b treatment was associated with attenuation of STAT3/FGL2 signaling and partial restoration of DC-mediated T cell priming, with more pronounced immunomodulatory effects observed in JAK2v617f-positive myeloproliferative neoplasms compared with other subtypes.
Conclusions
Our findings indicate that JAK2v617f is associated with STAT3-dependent dendritic cell dysfunction that contributes to an immunosuppressive milieu. IFNα2b modulates this pathway and partially restores DC–T cell interactions, highlighting its potential as an immunomodulatory strategy in JAK2v617f-positive myeloproliferative neoplasms.
{"title":"IFNα2b modulates anti-tumor immune responses involving STAT3-associated dendritic cell dysfunction in JAK2v617f-positive myeloproliferative neoplasms","authors":"Lijun Fang , Rongfeng Fu , Huan Dong , Wenhui Zhang , Yuchen Gao , Yanmei Xu , Wenjing Gu , Zixuan Liu , Huiyuan Li , Wentian Wang , Xiaolei Pei , Ying Chi , Yuan Zhou , Jun Wei , Ying Wang , Lei Zhang","doi":"10.1016/j.drup.2026.101352","DOIUrl":"10.1016/j.drup.2026.101352","url":null,"abstract":"<div><h3>Aims</h3><div>To define <em>JAK2v617f</em>-induced immune alterations, focusing on STAT3-mediated dendritic cell dysfunction, and evaluate whether IFNα2b restores anti-tumor immunity in <em>JAK2v617f</em>-positive myeloproliferative neoplasms.</div></div><div><h3>Methods</h3><div>Integrated flow cytometry and single-cell RNA sequencing profiled immune landscapes and signaling pathways, while functional assays assessed dendritic cell differentiation, T cell activation, and IFNα2b-mediated immune restoration.</div></div><div><h3>Results</h3><div><em>JAK2v617f</em> was associated with increased STAT3 activation in myeloid cells, accompanied by elevated expression of immunosuppressive mediators such as FGL2, impaired monocyte-to-DC differentiation, reduced cDC1/cDC2 subsets, and diminished T cell activation, consistent with an immunosuppressive immune landscape. IFNα2b treatment was associated with attenuation of STAT3/FGL2 signaling and partial restoration of DC-mediated T cell priming, with more pronounced immunomodulatory effects observed in <em>JAK2v617f</em>-positive myeloproliferative neoplasms compared with other subtypes.</div></div><div><h3>Conclusions</h3><div>Our findings indicate that <em>JAK2v617f</em> is associated with STAT3-dependent dendritic cell dysfunction that contributes to an immunosuppressive milieu. IFNα2b modulates this pathway and partially restores DC–T cell interactions, highlighting its potential as an immunomodulatory strategy in <em>JAK2v617f</em>-positive myeloproliferative neoplasms.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101352"},"PeriodicalIF":21.7,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145902552","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-02DOI: 10.1016/j.drup.2026.101351
Lianli Ni , Hailong Li , Peipei Chen , Yun Yu , Chenjun Xie , Wenfeng Hong , Gaowei Fang , Baohong Wan , Yiwei Shen , Peng Zou , Wangyu Zhu , Zhiguo Liu , Xiaokun Li , Ri Cui
Non-small cell lung cancer (NSCLC) is the most common form of lung cancer and the leading cause of cancer-related deaths globally. The RNA binding protein Quaking-5 (QKI-5) has been established as a tumor suppressor in NSCLC. Inducing ferroptosis is regarded as an effective therapeutic strategy for cancer treatment, and long non-coding RNA (lncRNA) plays a critical role in the regulation of ferroptosis. However, the relationship between QKI-5-regulated lncRNA and ferroptosis remains uncharacterized in NSCLC. In this study, we discovered that QKI-5 downregulates the oncogenic lncRNA linc01833, which inhibits ferroptosis and promotes NSCLC progression by activating SLC7A11/GPX4 signaling pathway. Mechanistically, QKI-5 negatively regulates the stability of linc01833, leading to increased linc01833 expression in NSCLC. Silencing linc01833 enhanced WW domain-containing E3 ubiquitin protein ligase 1 (WWP1)-mediated ubiquitination of SLC7A11, resulting in decreased SLC7A11 expression, while overexpression of linc01833 produced the opposite effect. Further analyses demonstrated that linc01833 diminished the anti-tumor effect of gemcitabine (GEM) in NSCLC both in vivo and in vitro. Additionally, knocking down linc01833 or SLC7A11 is able to inhibit GEM resistant NSCLC growth. Our findings suggest that targeting linc01833 to induce ferroptosis could enhance the cytotoxic effects of chemotherapeutic agents and may serve as an effective therapeutic strategy for some NSCLC patients.
{"title":"Linc01833 drives gemcitabine resistance in non-small cell lung cancer by shielding SLC7A11 from WWP1-mediated ubiquitination and inhibiting ferroptosis","authors":"Lianli Ni , Hailong Li , Peipei Chen , Yun Yu , Chenjun Xie , Wenfeng Hong , Gaowei Fang , Baohong Wan , Yiwei Shen , Peng Zou , Wangyu Zhu , Zhiguo Liu , Xiaokun Li , Ri Cui","doi":"10.1016/j.drup.2026.101351","DOIUrl":"10.1016/j.drup.2026.101351","url":null,"abstract":"<div><div>Non-small cell lung cancer (NSCLC) is the most common form of lung cancer and the leading cause of cancer-related deaths globally. The RNA binding protein Quaking-5 (QKI-5) has been established as a tumor suppressor in NSCLC. Inducing ferroptosis is regarded as an effective therapeutic strategy for cancer treatment, and long non-coding RNA (lncRNA) plays a critical role in the regulation of ferroptosis. However, the relationship between QKI-5-regulated lncRNA and ferroptosis remains uncharacterized in NSCLC. In this study, we discovered that QKI-5 downregulates the oncogenic lncRNA linc01833, which inhibits ferroptosis and promotes NSCLC progression by activating SLC7A11/GPX4 signaling pathway. Mechanistically, QKI-5 negatively regulates the stability of linc01833, leading to increased linc01833 expression in NSCLC. Silencing linc01833 enhanced WW domain-containing E3 ubiquitin protein ligase 1 (WWP1)-mediated ubiquitination of SLC7A11, resulting in decreased SLC7A11 expression, while overexpression of linc01833 produced the opposite effect. Further analyses demonstrated that linc01833 diminished the anti-tumor effect of gemcitabine (GEM) in NSCLC both <em>in vivo</em> and <em>in vitro</em>. Additionally, knocking down linc01833 or SLC7A11 is able to inhibit GEM resistant NSCLC growth. Our findings suggest that targeting linc01833 to induce ferroptosis could enhance the cytotoxic effects of chemotherapeutic agents and may serve as an effective therapeutic strategy for some NSCLC patients.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101351"},"PeriodicalIF":21.7,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145895425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-02DOI: 10.1016/j.drup.2026.101350
Lenka Trnkova , Monika Burikova , Andrea Soltysova , Andrej Ficek , Jana Plava , Andrea Cumova , Lucia Rojikova , Kristina Jakic , Eva Sedlackova , Boris Tichy , Vojtech Bystry , Florence Busato , Yimin Shen , Miroslava Matuskova , Lucia Kucerova , Geir Frode Øy , Gunhild Mari Mælandsmo , Thomas Fleischer , Jorg Tost , Svetlana Miklikova , Bozena Smolkova
Aims
Chemotherapy resistance remains a major challenge in breast cancer (BC) treatment. This study aimed to investigate the role of DNA methylation in this complex process and evaluate the potential of the DNA methyltransferase inhibitor decitabine (DAC) in restoring chemosensitivity.
Methods
Paclitaxel (PAC)- and doxorubicin (DOX)- resistant BC cell lines were derived from luminal A (T-47D), triple-negative (MDA-MB-231), and HER2-positive (JIMT-1) models and characterized by molecular profiling and functional assays. The therapeutic effects of DAC and DOX were assessed in MDA-MB-231 xenografts, and integrative analyses of DNA methylation and gene expression identified pathways associated with resistance. Follow-up analyses were performed in PAC-resistant MAS98.12 patient-derived xenografts (PDX) and in clinical samples from the NeoAva trial (NCT00773695).
Results
Resistant cells exhibited a slow-cycling phenotype, reduced tumorigenicity, and widespread genomic alterations. PAC-resistant xenografts showed extensive methylation and transcriptomic reprogramming, partly restored by DAC, which increased Ki-67 expression and enhanced DOX responsiveness. In contrast, PDX tumors displayed less pronounced changes, predominantly hypomethylation, indicating distinct resistance mechanisms. Importantly, xenograft-derived CpG signatures stratified NeoAva patients by treatment response.
Conclusions
Chemoresistance in BC involves extensive genomic and epigenetic remodeling. Although DAC can modulate methylation and tumor phenotype, rational drug combinations will be required to overcome resistance.
化疗耐药仍然是乳腺癌(BC)治疗的主要挑战。本研究旨在探讨DNA甲基化在这一复杂过程中的作用,并评估DNA甲基转移酶抑制剂地西他滨(DAC)在恢复化学敏感性方面的潜力。方法从luminal A (T-47D)、三阴性(MDA-MB-231)和her2阳性(JIMT-1)模型中分离出抗spaclitaxel (PAC)和doxorubicin (DOX)的BC细胞株,通过分子分析和功能分析对其进行鉴定。在MDA-MB-231异种移植物中评估DAC和DOX的治疗效果,并对DNA甲基化和基因表达进行综合分析,确定与耐药性相关的途径。对pac耐药的MAS98.12患者源异种移植物(PDX)和NeoAva试验(NCT00773695)的临床样本进行了随访分析。结果耐药细胞表现出慢循环表型,降低致瘤性和广泛的基因组改变。pac耐药的异种移植物表现出广泛的甲基化和转录组重编程,部分通过DAC恢复,从而增加Ki-67表达并增强DOX反应性。相比之下,PDX肿瘤表现出不太明显的变化,主要是低甲基化,表明不同的耐药机制。重要的是,异种移植物来源的CpG特征通过治疗反应对NeoAva患者进行分层。结论BC耐药涉及广泛的基因组和表观遗传重塑。虽然DAC可以调节甲基化和肿瘤表型,但需要合理的药物组合来克服耐药性。
{"title":"Molecular profiling of chemotherapy-resistant breast cancer reveals DNA methylation remodeling associated with the acquisition of paclitaxel resistance","authors":"Lenka Trnkova , Monika Burikova , Andrea Soltysova , Andrej Ficek , Jana Plava , Andrea Cumova , Lucia Rojikova , Kristina Jakic , Eva Sedlackova , Boris Tichy , Vojtech Bystry , Florence Busato , Yimin Shen , Miroslava Matuskova , Lucia Kucerova , Geir Frode Øy , Gunhild Mari Mælandsmo , Thomas Fleischer , Jorg Tost , Svetlana Miklikova , Bozena Smolkova","doi":"10.1016/j.drup.2026.101350","DOIUrl":"10.1016/j.drup.2026.101350","url":null,"abstract":"<div><h3>Aims</h3><div>Chemotherapy resistance remains a major challenge in breast cancer (BC) treatment. This study aimed to investigate the role of DNA methylation in this complex process and evaluate the potential of the DNA methyltransferase inhibitor decitabine (DAC) in restoring chemosensitivity.</div></div><div><h3>Methods</h3><div>Paclitaxel (PAC)- and doxorubicin (DOX)- resistant BC cell lines were derived from luminal A (T-47D), triple-negative (MDA-MB-231), and HER2-positive (JIMT-1) models and characterized by molecular profiling and functional assays. The therapeutic effects of DAC and DOX were assessed in MDA-MB-231 xenografts, and integrative analyses of DNA methylation and gene expression identified pathways associated with resistance. Follow-up analyses were performed in PAC-resistant MAS98.12 patient-derived xenografts (PDX) and in clinical samples from the NeoAva trial (NCT00773695).</div></div><div><h3>Results</h3><div>Resistant cells exhibited a slow-cycling phenotype, reduced tumorigenicity, and widespread genomic alterations. PAC-resistant xenografts showed extensive methylation and transcriptomic reprogramming, partly restored by DAC, which increased Ki-67 expression and enhanced DOX responsiveness. In contrast, PDX tumors displayed less pronounced changes, predominantly hypomethylation, indicating distinct resistance mechanisms. Importantly, xenograft-derived CpG signatures stratified NeoAva patients by treatment response.</div></div><div><h3>Conclusions</h3><div>Chemoresistance in BC involves extensive genomic and epigenetic remodeling. Although DAC can modulate methylation and tumor phenotype, rational drug combinations will be required to overcome resistance.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101350"},"PeriodicalIF":21.7,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145895426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-30DOI: 10.1016/j.drup.2025.101349
Xinjun Liu , Zizhen Si , Linbo Li , Miao Zhou , Ki-Young Lee , Xidi Wang
Aims
Triple negative breast cancer (TNBC) is an aggressive type of breast cancer with limited therapeutic options and frequent chemoresistance. AMPK catalytic α-subunit 2 (AMPKα2) is implicated in development of chemoresistance in various cancers. However, the role of AMPKα2 in doxorubicin (DOX)-resistance in TNBC remains to be investigated.
Methods
The levels of AMPKα2 in DOX-resistant TNBC was examined by Western blotting. AMPKα2 functions on DOX induced ferroptosis were assessed by lipid peroxidation, intracellular iron, MDA, and GSH detection assays. Western blotting, qRT-PCR, co-IP, immunofluorescence staining and KFERQ-mCherry reporter assay were performed to demonstrate the role of AMPKα2 and its association with NCOA4 degradation.
Results
AMPKα2, rather than AMPKα1, was upregulated in DOX-resistant TNBC cells. AMPKα2 inhibited DOX-induced ferroptosis by suppressing NCOA4. AMPKα2 phosphorylated NCOA4 at S151, which enhanced the recognition of NCOA4 by HSC70, and the formation of NCOA4/HSC70/LAMP-2A complex to initiate CMA pathway mediated NCOA4 degradation. S151A mutation or AMPKα inhibitor abolished these biological effects and increased the vulnerability to DOX-induced ferroptosis.
Conclusions
AMPKα2 suppressed DOX-induced ferroptosis through phosphorylating NCOA4 at S151 to induce its CMA pathway dependent degradation. Targeting AMPKα2 could be a potential strategy to overcome DOX resistance in TNBC patients.
{"title":"AMPKα2 attenuates doxorubicin induced ferroptosis by promoting NCOA4 degradation in triple negative breast cancer","authors":"Xinjun Liu , Zizhen Si , Linbo Li , Miao Zhou , Ki-Young Lee , Xidi Wang","doi":"10.1016/j.drup.2025.101349","DOIUrl":"10.1016/j.drup.2025.101349","url":null,"abstract":"<div><h3>Aims</h3><div>Triple negative breast cancer (TNBC) is an aggressive type of breast cancer with limited therapeutic options and frequent chemoresistance. AMPK catalytic α-subunit 2 (AMPKα2) is implicated in development of chemoresistance in various cancers. However, the role of AMPKα2 in doxorubicin (DOX)-resistance in TNBC remains to be investigated.</div></div><div><h3>Methods</h3><div>The levels of AMPKα2 in DOX-resistant TNBC was examined by Western blotting. AMPKα2 functions on DOX induced ferroptosis were assessed by lipid peroxidation, intracellular iron, MDA, and GSH detection assays. Western blotting, qRT-PCR, co-IP, immunofluorescence staining and KFERQ-mCherry reporter assay were performed to demonstrate the role of AMPKα2 and its association with NCOA4 degradation.</div></div><div><h3>Results</h3><div>AMPKα2, rather than AMPKα1, was upregulated in DOX-resistant TNBC cells. AMPKα2 inhibited DOX-induced ferroptosis by suppressing NCOA4. AMPKα2 phosphorylated NCOA4 at S151, which enhanced the recognition of NCOA4 by HSC70, and the formation of NCOA4/HSC70/LAMP-2A complex to initiate CMA pathway mediated NCOA4 degradation. S151A mutation or AMPKα inhibitor abolished these biological effects and increased the vulnerability to DOX-induced ferroptosis.</div></div><div><h3>Conclusions</h3><div>AMPKα2 suppressed DOX-induced ferroptosis through phosphorylating NCOA4 at S151 to induce its CMA pathway dependent degradation. Targeting AMPKα2 could be a potential strategy to overcome DOX resistance in TNBC patients.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101349"},"PeriodicalIF":21.7,"publicationDate":"2025-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145894006","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-29DOI: 10.1016/j.drup.2025.101348
Yudun Qu , Shuanji Ou , Jianping Wen , Jiaxuan Li , Changliang Xia , Pengchen Chen , Yang Yang , Jiabao Liu , Wenjun Li , Rongshen Yang , Wei Zen , Tingyu He , Jiatao Lei , Wei Zhang , Yunfei Ma , Nan Jiang , Yong Qi , Changpeng Xu
Antibiotic resistance in bone infection remains a major clinical challenge, leading to persistent inflammation, fibrotic remodeling, and failure of bone regeneration. Emerging evidence suggests that dysregulated immune–stromal interactions play a pivotal role in this process; however, how antibiotic resistance disrupts the osteoimmune balance—particularly the crosstalk between macrophages and mesenchymal stem cells (MSCs)—remains unclear. Here, we integrated single-cell RNA sequencing (scRNA-seq) of peri-infectious bone tissue with in vivo and in vitro experiments to delineate the cellular and molecular mechanisms underlying osteoimmune alterations associated with antibiotic resistance. Analysis of 101,336 single cells identified 10 major cell types, including macrophages, mesenchymal stem cells (MSCs), and neutrophils. Resistant infection induced M1-polarized macrophages with defective efferocytosis and MSCs undergoing PANoptosis and impaired osteogenic differentiation. Ligand–receptor analysis highlighted the SIRPα–Thbs1–CD47 axis as a key mediator of dysfunctional macrophage–MSC communication. Functional inhibition of CD47 signaling restored efferocytosis, mitigated antibiotic resistance–associated inflammation, and promoted bone regeneration. Collectively, these findings define a macrophage checkpoint–mediated mechanism linking immune dysregulation to osteogenic failure in antibiotic-resistant bone infection and suggest that targeting this axis may offer a promising therapeutic strategy.
{"title":"Myeloid immune checkpoint blockade overcomes antibiotic resistance in bone infection by enhancing efferocytosis and suppressing MSC PANoptosis","authors":"Yudun Qu , Shuanji Ou , Jianping Wen , Jiaxuan Li , Changliang Xia , Pengchen Chen , Yang Yang , Jiabao Liu , Wenjun Li , Rongshen Yang , Wei Zen , Tingyu He , Jiatao Lei , Wei Zhang , Yunfei Ma , Nan Jiang , Yong Qi , Changpeng Xu","doi":"10.1016/j.drup.2025.101348","DOIUrl":"10.1016/j.drup.2025.101348","url":null,"abstract":"<div><div>Antibiotic resistance in bone infection remains a major clinical challenge, leading to persistent inflammation, fibrotic remodeling, and failure of bone regeneration. Emerging evidence suggests that dysregulated immune–stromal interactions play a pivotal role in this process; however, how antibiotic resistance disrupts the osteoimmune balance—particularly the crosstalk between macrophages and mesenchymal stem cells (MSCs)—remains unclear. Here, we integrated single-cell RNA sequencing (scRNA-seq) of peri-infectious bone tissue with <em>in vivo</em> and <em>in vitro</em> experiments to delineate the cellular and molecular mechanisms underlying osteoimmune alterations associated with antibiotic resistance. Analysis of 101,336 single cells identified 10 major cell types, including macrophages, mesenchymal stem cells (MSCs), and neutrophils. Resistant infection induced M1-polarized macrophages with defective efferocytosis and MSCs undergoing PANoptosis and impaired osteogenic differentiation. Ligand–receptor analysis highlighted the SIRPα–Thbs1–CD47 axis as a key mediator of dysfunctional macrophage–MSC communication. Functional inhibition of CD47 signaling restored efferocytosis, mitigated antibiotic resistance–associated inflammation, and promoted bone regeneration. Collectively, these findings define a macrophage checkpoint–mediated mechanism linking immune dysregulation to osteogenic failure in antibiotic-resistant bone infection and suggest that targeting this axis may offer a promising therapeutic strategy.</div></div>","PeriodicalId":51022,"journal":{"name":"Drug Resistance Updates","volume":"85 ","pages":"Article 101348"},"PeriodicalIF":21.7,"publicationDate":"2025-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145884496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}