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Juvenile onset recurrent respiratory papillomatosis: What do we know in 2024 ? 青少年复发性呼吸道乳头状瘤病:2024 年我们将知道什么?
IF 4.3 Q1 VIROLOGY Pub Date : 2024-04-27 DOI: 10.1016/j.tvr.2024.200281
Charles Lepine , Nicolas Leboulanger , Cécile Badoual

Juvenile onset recurrent respiratory papillomatosis is a lifelong benign squamous lesion associated with HPV infection, particularly HPV6 and HPV11 genotypes. These lesions are rare, but can lead to laryngeal obturations, which can cause disabling dyspnea, or transform into squamous cell carcinoma. The aim here is to provide an epidemiological, biological and clinical overview of this pathology, particularly in children, in order to understand the issues at stake in terms of research and the development of medical and therapeutic management tools.

幼年复发性呼吸道乳头状瘤病是一种终身性良性鳞状病变,与人乳头状瘤病毒感染有关,尤其是人乳头状瘤病毒 6 和人乳头状瘤病毒 11 基因型。这种病变很少见,但可导致喉闭塞,引起致残性呼吸困难,或转化为鳞状细胞癌。本文旨在从流行病学、生物学和临床角度概述这种病变,尤其是儿童病变,以便了解在研究和开发医疗及治疗管理工具方面存在的问题。
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引用次数: 0
HPV16 E7 modulates the cell surface expression of MET and CD109 via the AP2 complex HPV16 E7 通过 AP2 复合物调节细胞表面 MET 和 CD109 的表达。
IF 4.3 Q1 VIROLOGY Pub Date : 2024-03-12 DOI: 10.1016/j.tvr.2024.200279
Oscar Trejo-Cerro , Om Basukala , Michael P. Myers , Lawrence Banks

Multiple cellular pathways are affected by HPV E6 and E7 oncoproteins, including endocytic and cellular trafficking. HPV-16 E7 can target the adaptor protein (AP) complex, which contains proteins important during endocytosis transport. To further investigate the role of HPV E7 during this process, we analysed the expression of cell surface proteins in NIKS cells expressing HPV-16 E7. We show that different cell surface proteins are regulated by HPV-16 E7 via interaction with AP2. We observed that the expression of MET and CD109 membrane protein seems to be upregulated in cells expressing E7. Moreover, the interaction of MET and CD109 with AP2 proteins is disrupted by HPV-16 E7. In addition, in the absence of HPV-16 E7, there is a downregulation of the cell membrane expression of MET and CD109 in HPV-positive cell lines. These results expand our knowledge of the functions of E7 and open new potential cellular pathways affected by this oncoprotein.

多种细胞通路会受到 HPV E6 和 E7 肿瘤蛋白的影响,包括内吞和细胞转运。HPV-16 E7 可靶向适配蛋白(AP)复合物,该复合物包含内吞转运过程中的重要蛋白质。为了进一步研究 HPV E7 在这一过程中的作用,我们分析了表达 HPV-16 E7 的 NIKS 细胞中细胞表面蛋白的表达情况。我们发现,HPV-16 E7 通过与 AP2 相互作用调控不同的细胞表面蛋白。我们观察到,在表达 E7 的细胞中,MET 和 CD109 膜蛋白的表达似乎被上调。此外,HPV-16 E7 破坏了 MET 和 CD109 与 AP2 蛋白的相互作用。此外,在没有 HPV-16 E7 的情况下,HPV 阳性细胞系中 MET 和 CD109 的细胞膜表达下调。这些结果拓展了我们对 E7 功能的认识,并开辟了受这种肿瘤蛋白影响的新的潜在细胞通路。
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引用次数: 0
Surveillance of human papillomavirus through salivary diagnostics - A roadmap to early detection of oropharyngeal cancer men 通过唾液诊断监测人类乳头瘤病毒--男性口咽癌早期检测路线图。
IF 4.3 Q1 VIROLOGY Pub Date : 2024-03-03 DOI: 10.1016/j.tvr.2024.200278
Akila Wijesekera , Chameera Ekanayake Weeramange , Sarju Vasani , Liz Kenny , Emma Knowland , Jayampath Seneviratne , Chamindie Punyadeera

Human papillomavirus (HPV) is the most common sexually transmitted disease. Certain strains have the potential to cause malignancy in multiple anatomical sites if not cleared by the immune system. In most infected people, HPV is cleared within two years. However, HPV may persist in susceptible individuals with certain risk factors, eventually leading to malignancy. New evidence suggests that over 75% of all oropharyngeal cancers (OPC) are directly attributable to HPV. It is estimated that prophylactic HPV vaccination alone may take at least 25 years to have a significant impact on reducing the incidence of OPC. The temporal link between detection of oral HPV, persistence of the infection and the subsequent development of OPC have been well established. Moreover, men have threefold higher risk than women for acquiring HPV-OPC. This comprehensive review focuses on OPC development in men, highlighting the risk factors associated with malignant transformation of HPV-OPC. Current evidence is insufficient to determine whether early identification of at-risk demographics, screening, and prompt diagnosis result in improved outcomes. Hitherto, the effectiveness of an oral HPV screening program in this regard has not been investigated. Nevertheless, the potential to emulate the success of the cervical screening program remains a very real possibility.

人类乳头瘤病毒(HPV)是最常见的性传播疾病。某些病毒株如果不被免疫系统清除,有可能在多个解剖部位引发恶性肿瘤。大多数感染者的 HPV 会在两年内被清除。然而,HPV 可能会在具有某些风险因素的易感人群中持续存在,最终导致恶性肿瘤。新证据表明,超过 75% 的口咽癌(OPC)可直接归因于 HPV。据估计,单靠预防性 HPV 疫苗接种可能至少需要 25 年才能对降低口咽癌发病率产生显著影响。口腔人乳头瘤病毒的检测、感染的持续存在以及随后发展成 OPC 之间的时间联系已得到充分证实。此外,男性感染 HPV-OPC 的风险是女性的三倍。本综述重点关注男性 OPC 的发展,强调与 HPV-OPC 恶性转化相关的风险因素。目前的证据不足以确定早期识别高危人群、筛查和及时诊断是否能改善预后。迄今为止,口腔 HPV 筛查项目在这方面的有效性尚未得到研究。尽管如此,仿效宫颈筛查计划的成功仍有很大的可能性。
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引用次数: 0
E4orf1: The triple agent of adenovirus – Unraveling its roles in oncogenesis, infectious obesity and immune responses in virus replication and vector therapy E4orf1:腺病毒的三重药剂--揭示其在肿瘤发生、传染性肥胖以及病毒复制和载体治疗中的免疫反应中的作用。
IF 4.3 Q1 VIROLOGY Pub Date : 2024-02-28 DOI: 10.1016/j.tvr.2024.200277
Lilian Göttig , Sabrina Schreiner

Human Adenoviruses (HAdV) are nearly ubiquitous pathogens comprising numerous sub-types that infect various tissues and organs. Among many encoded proteins that facilitate viral replication and subversion of host cellular processes, the viral E4orf1 protein has emerged as an intriguing yet under-investigated player in the complex interplay between the virus and its host. E4orf1 has gained attention as a metabolism activator and oncogenic agent, while recent research is showing that E4orf1 may play a more important role in modulating cellular pathways such as PI3K-Akt-mTOR, Ras, the immune response and further HAdV replication stages than previously anticipated.

In this review, we aim to explore the structure, molecular mechanisms, and biological functions of E4orf1, shedding light on its potentially multifaceted roles during HAdV infection, including metabolic diseases and oncogenesis. Furthermore, we discuss the role of functional E4orf1 in biotechnological applications such as Adenovirus (AdV) vaccine vectors and oncolytic AdV. By dissecting the intricate relationships between HAdV types and E4orf1 proteins, this review provides valuable insights into viral pathogenesis and points to promising areas of future research.

人类腺病毒(HAdV)是一种几乎无处不在的病原体,由许多亚型组成,可感染各种组织和器官。在许多促进病毒复制和颠覆宿主细胞过程的编码蛋白中,病毒 E4orf1 蛋白已成为病毒与其宿主之间复杂相互作用中一个令人感兴趣但研究不足的角色。E4orf1 作为一种新陈代谢激活剂和致癌物质而备受关注,而最近的研究表明,E4orf1 在调节 PI3K-Akt-mTOR、Ras、免疫反应和 HAdV 进一步复制阶段等细胞通路方面可能发挥着比以前预期的更重要的作用。在这篇综述中,我们旨在探讨 E4orf1 的结构、分子机制和生物功能,揭示其在 HAdV 感染过程中可能发挥的多方面作用,包括代谢性疾病和肿瘤发生。此外,我们还讨论了功能性 E4orf1 在腺病毒(AdV)疫苗载体和溶瘤 AdV 等生物技术应用中的作用。通过剖析 HAdV 类型和 E4orf1 蛋白之间错综复杂的关系,这篇综述为病毒的发病机制提供了宝贵的见解,并指出了未来有希望的研究领域。
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引用次数: 0
Analytical validation and diagnostic performance of the ASCL1/ZNF582 methylation test for detection of high-grade anal intraepithelial neoplasia and anal cancer 用于检测高级别肛门上皮内瘤变和肛门癌的 ASCL1/ZNF582 甲基化检验的分析验证和诊断性能。
IF 4.3 Q1 VIROLOGY Pub Date : 2023-12-30 DOI: 10.1016/j.tvr.2023.200275
Kirsten Rozemeijer , Fernando Dias Gonçalves Lima , Timo J. ter Braak , Albertus T. Hesselink , Jan M. Prins , Henry J.C. de Vries , Renske D.M. Steenbergen

DNA methylation testing on biopsies can detect high-grade anal intraepithelial neoplasia (HGAIN) in need of treatment and anal cancer. This study aimed to analytically validate and determine the diagnostic performance of a newly developed multiplex quantitative methylation-specific PCR, PreCursor-M AnoGYN (RUO), combining ASCL1, ZNF582 and a reference (ACTB) in one assay. Analytical validation was performed on two qPCR devices using predefined quality criteria. Diagnostic performance was determined on a cross-sectional series of 111 anal biopsies covering all stages of anal disease. Differences in methylation levels were assessed using the Kruskal-Wallis test. Area under the curve was determined using logistic regression analysis. Detection rates were calculated at predefined specificities for the cross-sectional and an additional longitudinal series of 23 HGAIN biopsies preceding anal cancer (i.e., progressive HGAIN).

For both devices analytical quality criteria were met. ASCL1 and ZNF582 methylation levels increased with increasing severity of disease (p < 6*10−8). Diagnostic performance for AIN3+ was 0.81. All cancers and virtually all progressive HGAIN were detected at 70% and 80% specificity.

In conclusion, the ASCL1/ZNF582 methylation test (PreCursor-M AnoGYN (RUO)) was demonstrated to be highly robust and reproducible. Moreover, it had excellent diagnostic accuracy to detect AIN3+ and can potentially be used to guide HGAIN management.

对活检组织进行 DNA 甲基化检测可以发现需要治疗的高级别肛门上皮内瘤变(HGAIN)和肛门癌。本研究旨在分析验证和确定新开发的多重甲基化特异性定量 PCR PreCursor-M AnoGYN(RUO)的诊断性能。使用预定义的质量标准在两台 qPCR 设备上进行了分析验证。对 111 例肛门活检的横断面系列进行了诊断性能测定,涵盖了肛门疾病的所有阶段。甲基化水平的差异采用 Kruskal-Wallis 检验进行评估。采用逻辑回归分析确定曲线下面积。按照预定的特异性计算了肛门癌(即进展期 HGAIN)之前的横断面和另外 23 个纵向 HGAIN 活检系列的检出率。两种设备均符合分析质量标准。ASCL1 和 ZNF582 甲基化水平随病情严重程度的增加而增加(p -8)。AIN3+ 的诊断率为 0.81。所有癌症和几乎所有进行性 HGAIN 的检测特异性分别为 70% 和 80%。总之,ASCL1/ZNF582 甲基化检测(PreCursor-M AnoGYN(RUO))被证明具有高度的稳健性和可重复性。此外,它在检测 AIN3+ 方面具有极高的诊断准确性,可用于指导 HGAIN 管理。
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引用次数: 0
Epstein-Barr Virus miR-BARTs 7 and 9 modulate viral cycle, cell proliferation, and proteomic profiles in Burkitt lymphoma Epstein-Barr 病毒 miR-BARTs 7 和 9 调节伯基特淋巴瘤的病毒周期、细胞增殖和蛋白质组特征。
IF 4.3 Q1 VIROLOGY Pub Date : 2023-12-29 DOI: 10.1016/j.tvr.2023.200276
Brunno Felipe Ramos Caetano , Viviana Loureiro Rocha , Bruno Cesar Rossini , Lucilene Delazari Dos Santos , Deilson Elgui De Oliveira

The Epstein-Barr Virus (EBV) encodes viral microRNAs (miRs) that have been implicated in the pathogenesis of nasopharyngeal and gastric carcinomas, yet their potential roles in lymphomas remain to be fully elucidated. This study evaluated the impact of CRISPR/Cas9-mediated knockdown of EBV miRs BART-7 and BART-9 in EBV-positive Burkitt lymphoma cells Akata. As anticipated, the Akata cells subjected to CRISPR/Cas9-mediated knockdown of either EBV BART-7 or BART-9 exhibited a significant reduction in the expression of these viral miRs compared to cells with wild-type (wt) EBV genomes. This outcome effectively validates the experimental model employed in this study. Knocking down either BART-7 or BART-9 resulted in a notable reduction in cell viability and proliferation rates, alongside an elevation in the expression of EBV lytic genes. Global proteomic analysis revealed that the knockdown of EBV BART-7 significantly decreased the expression of ubiquitin/proteasome proteins while concurrently increasing RNA binding proteins (RBPs). Conversely, BART-9 knockdown reduced proteins associated with oxidoreductase activity, particularly those involved in fatty acid metabolism. Our findings unveil previously undiscovered EBV miRs BARTs 7 and 9 roles in cellular pathways relevant to both viral biology and lymphomagenesis.

爱泼斯坦-巴氏病毒(EBV)编码的病毒微RNA(miRs)有助于鼻咽癌和胃癌的发病机制,但它们在淋巴瘤中的潜在作用仍有待阐明。本研究试图利用 CRISPR/Cas9 技术评估敲除 EBV miRs BART 7 和 BART9 对 EBV 阳性 Akata 细胞系的影响。与携带野生型(WT)EBV基因组的细胞相比,经CRISPR/Cas9介导敲除EBV BART 7和BART9的Akata细胞显示病毒miRs的表达明显减少,证实了实验模型的有效性。敲除 BART7 和 BART9 会显著降低细胞活力和增殖率,同时增加 EBV 溶菌基因的表达。全局蛋白质组分析表明,敲除 EBV BART7 会显著降低泛素/蛋白酶体蛋白的表达,同时增加 RNA 结合蛋白(RBPs)。另一方面,敲除 BART9 会导致与氧化还原酶活性(包括脂肪酸代谢)相关的蛋白质减少。我们的研究结果揭示了 EBV miRs BART7 和 BART9 在与病毒生物学和淋巴瘤发生相关的细胞通路中的未知作用。
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引用次数: 0
Editorial board member 编辑委员会成员
IF 4.3 Q1 VIROLOGY Pub Date : 2023-12-01 DOI: 10.1016/S2666-6790(23)00020-4
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引用次数: 0
Interplay between the DNA damage response and the life cycle of DNA tumor viruses DNA损伤反应与DNA肿瘤病毒生命周期之间的相互作用。
IF 4.3 Q1 VIROLOGY Pub Date : 2023-10-31 DOI: 10.1016/j.tvr.2023.200272
Caleb J. Studstill , Michelle Mac , Cary A. Moody

Approximately 20 % of human cancers are associated with virus infection. DNA tumor viruses can induce tumor formation in host cells by disrupting the cell's DNA replication and repair mechanisms. Specifically, these viruses interfere with the host cell's DNA damage response (DDR), which is a complex network of signaling pathways that is essential for maintaining the integrity of the genome. DNA tumor viruses can disrupt these pathways by expressing oncoproteins that mimic or inhibit various DDR components, thereby promoting genomic instability and tumorigenesis. Recent studies have highlighted the molecular mechanisms by which DNA tumor viruses interact with DDR components, as well as the ways in which these interactions contribute to viral replication and tumorigenesis. Understanding the interplay between DNA tumor viruses and the DDR pathway is critical for developing effective strategies to prevent and treat virally associated cancers. In this review, we discuss the current state of knowledge regarding the mechanisms by which human papillomavirus (HPV), merkel cell polyomavirus (MCPyV), Kaposi's sarcoma-associated herpesvirus (KSHV), and Epstein-Barr virus (EBV) interfere with DDR pathways to facilitate their respective life cycles, and the consequences of such interference on genomic stability and cancer development.

大约20 % 许多人类癌症与病毒感染有关。DNA肿瘤病毒可以通过破坏细胞的DNA复制和修复机制来诱导宿主细胞中的肿瘤形成。具体来说,这些病毒会干扰宿主细胞的DNA损伤反应(DDR),DDR是一个复杂的信号通路网络,对维持基因组的完整性至关重要。DNA肿瘤病毒可以通过表达模拟或抑制各种DDR成分的癌蛋白来破坏这些途径,从而促进基因组的不稳定性和肿瘤发生。最近的研究强调了DNA肿瘤病毒与DDR成分相互作用的分子机制,以及这些相互作用促进病毒复制和肿瘤发生的方式。了解DNA肿瘤病毒和DDR途径之间的相互作用对于制定预防和治疗病毒相关癌症的有效策略至关重要。在这篇综述中,我们讨论了人类乳头瘤病毒(HPV)、默克尔细胞多瘤病毒(MCPyV)、卡波西肉瘤相关疱疹病毒(KSHV)和EB病毒(EBV)干扰DDR途径以促进其各自生命周期的机制,以及这种干扰对基因组稳定性和癌症发展的影响。
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引用次数: 0
Construction of a diagnostic model for hepatitis B-related hepatocellular carcinoma using machine learning and artificial neural networks and revealing the correlation by immunoassay 使用机器学习和人工神经网络构建乙型肝炎相关肝细胞癌的诊断模型,并通过免疫测定揭示相关性。
IF 4.3 Q1 VIROLOGY Pub Date : 2023-09-27 DOI: 10.1016/j.tvr.2023.200271
Shengke Zhang , Chenglu Jiang , Lai Jiang , Haiqing Chen , Jinbang Huang , Xinrui Gao , Zhijia Xia , Lisa Jia Tran , Jing Zhang , Hao Chi , Guanhu Yang , Gang Tian

HBV infection profoundly escalates hepatocellular carcinoma (HCC) susceptibility, responsible for a majority of HCC cases. HBV-driven immune-mediated hepatocyte impairment significantly fuels HCC progression. Regrettably, inconspicuous early HCC symptoms often culminate in belated diagnoses. Nevertheless, surgically treated early-stage HCC patients relish augmented five-year survival rates. In contrast, advanced HCC exhibits feeble responses to conventional interventions like radiotherapy, chemotherapy, and surgery, leading to diminished survival rates. This investigation endeavors to unearth diagnostic hallmark genes for HBV-HCC leveraging a bioinformatics framework, thus refining early HBV-HCC detection. Candidate genes were sieved via differential analysis and Weighted Gene Co-Expression Network Analysis (WGCNA). Employing three distinct machine learning algorithms unearthed three feature genes (HHIP, CXCL14, and CDHR2). Melding these genes yielded an innovative Artificial Neural Network (ANN) diagnostic blueprint, portending to alleviate patient encumbrance and elevate life quality. Immunoassay scrutiny unveiled accentuated immune damage in HBV-HCC patients relative to solitary HCC. Through consensus clustering, HBV-HCC was stratified into two subtypes (C1 and C2), the latter potentially indicating milder immune impairment. The diagnostic model grounded in these feature genes showcased robust and transferrable prognostic potentialities, introducing a novel outlook for early HBV-HCC diagnosis. This exhaustive immunological odyssey stands poised to expedite immunotherapeutic curatives' emergence for HBV-HCC.

HBV感染使肝细胞癌(HCC)的易感性急剧上升,这是大多数HCC病例的原因。HBV驱动的免疫介导的肝细胞损伤显著促进HCC的进展。令人遗憾的是,不明显的早期HCC症状往往最终导致诊断滞后。尽管如此,手术治疗的早期HCC患者喜欢提高五年生存率。相比之下,晚期HCC对放疗、化疗和手术等常规干预措施的反应较弱,导致生存率下降。这项研究试图利用生物信息学框架挖掘HBV-HCC的诊断标志基因,从而完善早期HBV-肝癌检测。通过差异分析和加权基因共表达网络分析(WGCNA)筛选候选基因。使用三种不同的机器学习算法发现了三个特征基因(HHIP、CXCL14和CDHR2)。融合这些基因产生了一个创新的人工神经网络(ANN)诊断蓝图,预示着减轻患者负担和提高生活质量。免疫分析显示,与孤立性HCC相比,HBV-HCC患者的免疫损伤加重。通过一致聚类,HBV-HCC分为两种亚型(C1和C2),后者可能表明免疫损伤较轻。基于这些特征基因的诊断模型显示出强大和可转移的预后潜力,为早期HBV-HCC诊断提供了新的前景。这场详尽的免疫之旅将加速HBV-HCC免疫治疗药物的出现。
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引用次数: 1
Identification and characterisation of novel potential phospho-acceptor sites in HPV-16 E7 hpv - 16e7新型潜在磷酸化受体位点的鉴定和表征
IF 4.3 Q1 VIROLOGY Pub Date : 2023-09-01 DOI: 10.1016/j.tvr.2023.200270
Oscar Trejo-Cerro , Justyna Broniarczyk , Nezka Kavcic , Michael Myers , Lawrence Banks

Several studies have described functional regulation of high-risk human papillomaviruses (HPVs), E6 and E7 oncoproteins via posttranslational modifications (PTMs). However, how these PTMs modulate the activity of E6 and E7, particularly in their targeting of cellular proteins, is not completely understood. In this study, we show that HPV16 E7 can be phosphorylated by casein kinase I (CKI) and glycogen synthase kinase 3 (GSK3). This principal phosphorylation occurs at threonine residues 5 and 7 with a more minor role for residues 19–20 in the N-terminal region of 16 E7. Intriguingly, whilst mutational analyses suggest that residues 5 and 7 may be dispensable for the transformation of primary baby rat kidney cells by E7, intact residues 19 and 20 are required. Furthermore, negative charges at these residues (TT19-20DD) enhance the pRb-E7 interaction and cells display increased proliferation and invasion capacities. Using a proteomic approach with a phosphorylated peptide spanning the TT19-20 region of HPV16 E7, we have identified a panel of new, phospho-specific E7 interacting partners. These results shed new light on the complexity of N-terminal phosphorylation of E7 and how this can contribute towards expanding the repertoire of E7 targeted pathways.

一些研究描述了通过翻译后修饰(PTM)对高危人乳头瘤病毒(HPV)、E6和E7癌蛋白的功能调节。然而,这些PTM如何调节E6和E7的活性,特别是在其靶向细胞蛋白方面,尚不完全清楚。在本研究中,我们发现HPV16E7可以被酪蛋白激酶I(CKI)和糖原合成酶激酶3(GSK3)磷酸化。这种主要的磷酸化发生在苏氨酸残基5和7,而在16E7的N-末端区域中,残基19-20的作用较小。有趣的是,虽然突变分析表明残基5和7对于E7转化原代幼鼠肾细胞可能是可有可无的,但需要完整的残基19和20。此外,这些残基上的负电荷(TT19-20DD)增强了pRb-E7的相互作用,细胞表现出增加的增殖和侵袭能力。使用跨越HPV16 E7 TT19-20区域的磷酸化肽的蛋白质组学方法,我们已经鉴定了一组新的磷酸特异性E7相互作用伴侣。这些结果为E7 N端磷酸化的复杂性以及这如何有助于扩大E7靶向途径的范围提供了新的线索。
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引用次数: 0
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Tumour Virus Research
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