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Multi-stage fusion of dual attention mask R-CNN and geometric filtering for fast and accurate localization of occluded apples 双注意掩膜R-CNN与几何滤波多阶段融合快速准确定位被遮挡苹果
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-11 DOI: 10.1016/j.aiia.2025.10.005
Houkang Jiang , Jizhan Liu , Xiaojie Lei , Baocheng Xu , Yucheng Jin
In unstructured orchard environments, factors such as complex lighting, fruit occlusion, and fruit clustering significantly reduce the accuracy of apple detection and 3D localization in robotic harvesting systems. To enhance the perception and reconstruction of occluded fruits, this paper proposes a multi-stage fusion framework for high-precision and robust processing, from image enhancement to 3D reconstruction. First, an adaptive image enhancement algorithm based on the HSV color space is employed to effectively alleviate image degradation caused by uneven lighting. Then, an improved Mask R-CNN with a dual-attention mechanism (SE-CBAM) is introduced to achieve scale-adaptive fruit segmentation under occlusion conditions. Next, a hierarchical point cloud purification strategy combining depth clustering and geometric feature analysis is applied to remove branch and leaf interference. Finally, a two-step RANSAC-LM spherical fitting algorithm is used to quickly and accurately recover the 3D shape of the fruit from incomplete point clouds. Experimental results show that the proposed method achieves Mask IoUs of 0.89, 0.82, and 0.65 under mild, moderate, and severe occlusion, respectively, with the lowest 3D localization error of 0.42 cm and an overall processing frame rate of 20 FPS. In real orchard environments, the harvesting success rate under occlusion conditions reaches up to 82.7 %, significantly outperforming traditional point cloud centroid and 2D positioning methods. This study provides an efficient, robust, and real-time deployable visual solution for fruit localization and robotic harvesting in complex orchard environments.
在非结构化果园环境中,复杂光照、果实遮挡和果实聚类等因素显著降低了机器人收获系统中苹果检测和3D定位的准确性。为了增强遮挡水果的感知和重建,本文提出了一种从图像增强到三维重建的多阶段融合框架,实现高精度和鲁棒性处理。首先,采用基于HSV色彩空间的自适应图像增强算法,有效缓解光照不均匀造成的图像退化;然后,引入了一种改进的具有双注意机制的Mask R-CNN (SE-CBAM),实现了遮挡条件下的尺度自适应水果分割。其次,采用深度聚类和几何特征分析相结合的分层点云净化策略去除枝叶干扰;最后,采用两步RANSAC-LM球面拟合算法,从不完全点云中快速准确地恢复水果的三维形状。实验结果表明,该方法在轻度、中度和重度遮挡下的掩模误差分别为0.89、0.82和0.65,3D定位误差最低为0.42 cm,整体处理帧率为20 FPS。在真实果园环境中,遮挡条件下的收获成功率高达82.7%,明显优于传统的点云质心和二维定位方法。该研究为复杂果园环境下的水果定位和机器人收获提供了一种高效、鲁棒和实时可部署的视觉解决方案。
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引用次数: 0
A comprehensive review of obstacle avoidance for autonomous agricultural machinery in multi-operational environment 多作业环境下自主农业机械避障研究综述
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-03 DOI: 10.1016/j.aiia.2025.10.001
Zhijian Chen , Jianjun Yin , Sheikh Muhammad Farhan , Lu Liu , Ding Zhang , Maile Zhou , Junhui Cheng
As automation becomes increasingly adopted to mitigate labor shortages and boost productivity, autonomous technologies such as tractors, drones, and robotic devices are being utilized for various tasks that include plowing, seeding, irrigation, fertilization, and harvesting. Successfully navigating these changing agricultural landscapes necessitates advanced sensing, control, and navigation systems that can adapt in real time to guarantee effective and safe operations. This review focuses on obstacle avoidance systems in autonomous farming machinery, highlighting multi-functional capabilities within intricate field settings. It analyzes various sensing technologies, LiDAR, visual cameras, radar, ultrasonic sensors, GPS/GNSS, and inertial measurement units (IMU) for their individual and collective contributions to precise obstacle detection in fluctuating field conditions. The review examines the potential of multi-sensor fusion to enhance detection accuracy and reliability, with a particular emphasizing on achieving seamless obstacle recognition and response. It addresses recent advancements in control and navigation systems, particularly focusing on path-planning algorithms and real-time decision-making. It enables autonomous systems to adjust dynamically across multi-functional agricultural environments. The methodologies used for path planning, including adaptive and learning-based strategies, are discussed for their ability to optimize navigation in complicated field conditions. Real-time decision-making frameworks are similarly evaluated for their capacity to provide prompt, data-driven reactions to changing obstacles, which is critical for maintaining operational efficiency. Moreover, this review discusses environmental and topographical challenges like variable terrain, unpredictable weather, complex crop arrangements, and interference from co-located machinery that hinder obstacle detection and necessitate adaptive, resilient system responses. In addition, the paper emphasizes future research opportunities, highlighting the significance of advancements in multi-sensor fusion, deep learning for perception, adaptive path planning, model-free control strategies, artificial intelligence, and energy-efficient designs. Enhancing obstacle avoidance systems enables autonomous agricultural machinery to transform modern farming by increasing efficiency, precision, and sustainability. The review highlights the potential of these technologies to support global efforts for sustainable agriculture and food security, aligning agricultural innovation with the needs of a swiftly growing population.
随着自动化被越来越多地用于缓解劳动力短缺和提高生产力,拖拉机、无人机和机器人设备等自主技术正被用于各种任务,包括犁地、播种、灌溉、施肥和收获。在这些不断变化的农业景观中成功导航需要先进的传感、控制和导航系统,这些系统可以实时适应,以确保有效和安全的操作。本文重点介绍了自动农业机械中的避障系统,强调了在复杂的现场环境中的多功能功能。它分析了各种传感技术,激光雷达、视觉摄像机、雷达、超声波传感器、GPS/GNSS和惯性测量单元(IMU),以了解它们在波动场地条件下对精确障碍物检测的单独和集体贡献。这篇综述探讨了多传感器融合在提高检测精度和可靠性方面的潜力,特别强调了实现无缝障碍物识别和响应。它讨论了控制和导航系统的最新进展,特别侧重于路径规划算法和实时决策。它使自主系统能够在多功能农业环境中动态调整。用于路径规划的方法,包括自适应和基于学习的策略,讨论了它们在复杂现场条件下优化导航的能力。对实时决策框架的评估同样基于其对不断变化的障碍提供快速、数据驱动的反应的能力,这对于保持运营效率至关重要。此外,本文还讨论了环境和地形挑战,如多变的地形,不可预测的天气,复杂的作物安排,以及阻碍障碍物检测和需要适应性,弹性系统响应的同址机械的干扰。此外,本文还强调了未来的研究机会,强调了多传感器融合、感知深度学习、自适应路径规划、无模型控制策略、人工智能和节能设计等方面进展的重要性。增强避障系统使自主农业机械能够通过提高效率、精度和可持续性来改变现代农业。该评估强调了这些技术在支持可持续农业和粮食安全的全球努力、使农业创新与快速增长的人口的需求保持一致方面的潜力。
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引用次数: 0
Application of navigation technology in agricultural machinery: A review and prospects 导航技术在农业机械中的应用综述与展望
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-02 DOI: 10.1016/j.aiia.2025.10.003
Liuyan Feng , Changsu Xu , Han Tang , Zhongcai Wei , Xiaodong Guan , Jingcheng Xu , Mingjin Yang , Yunwu Li
With the rapid advancement of information technology, the intelligent and unmanned applications of agricultural machinery and equipment have become a central focus of current research. Navigation technology is central to achieving autonomous driving in agricultural machinery and plays a key role in advancing intelligent agriculture. However, although some studies have reviewed aspects of agricultural machinery navigation technologies, a comprehensive and systematic overview that clearly outlines the developmental trajectory of these technologies is still lacking. At the same time, there is an urgent need to break through traditional navigation frameworks to address the challenges posed by complex agricultural environments. Addressing this gap, this study provides a comprehensive overview of the evolution of navigation technologies in agricultural machinery, categorizing them into three stages: assisted navigation, autonomous navigation, and intelligent navigation, based on the level of autonomy in agricultural machinery. Special emphasis is placed on the brain-inspired navigation technology, which is an important branch of intelligent navigation and has attracted widespread attention as an emerging direction. It innovatively mimics the cognitive and learning abilities of the brain, demonstrating high adaptability and robustness to better handle uncertainty and complex environments. Importantly, this paper innovatively explores six potential applications of brain-inspired navigation technology in the agricultural field, highlighting its significant potential to enhance the intelligence of agricultural machinery. The review concludes by discussing current limitations and future research directions. The findings of this study aim to guide the development of more intelligent, adaptive, and resilient navigation systems, accelerating the transformation toward fully autonomous agricultural operations.
随着信息技术的飞速发展,农业机械装备的智能化、无人化应用已成为当前研究的热点。导航技术是实现农业机械自动驾驶的核心,在推进智能农业中发挥着关键作用。然而,尽管一些研究已经回顾了农机导航技术的各个方面,但仍然缺乏一个全面、系统的概述,清晰地勾勒出这些技术的发展轨迹。同时,迫切需要突破传统导航框架,应对复杂农业环境带来的挑战。为了解决这一问题,本研究全面概述了农业机械导航技术的发展历程,并根据农业机械的自主水平将其分为辅助导航、自主导航和智能导航三个阶段。脑启发导航技术是智能导航的一个重要分支,作为一个新兴方向受到了广泛关注。它创新性地模仿了大脑的认知和学习能力,展示了高适应性和鲁棒性,以更好地处理不确定性和复杂的环境。重要的是,本文创新性地探讨了脑控导航技术在农业领域的六种潜在应用,突出了其在提高农业机械智能化方面的巨大潜力。最后讨论了目前的局限性和未来的研究方向。本研究的结果旨在指导更智能、适应性和弹性的导航系统的发展,加速向完全自主农业经营的转变。
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引用次数: 0
Multivariate stacked regression pipeline to estimate correlated macro and micronutrients in potato plants using visible and near-infrared reflectance spectra 基于可见和近红外光谱的多变量堆叠回归管道估算马铃薯植物中相关宏微量元素
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-02 DOI: 10.1016/j.aiia.2025.09.001
Reem Abukmeil , Ahmad Al-Mallahi , Felipe Campelo
The ability to sense nutrient status in potato plants using spectroscopy has several merits including the ability to proactively respond to deficiencies of certain elements. While research so far has focused on finding spectral signatures of elements based on their foliar reflectance, the influence of the spectral signatures of the elements on each other in estimating their concentrations in the plant has not been investigated. This work presents a pipeline of stacked regression models capable of accurately estimating nutrient concentrations based on the foliar reflectance. A data set was built from 179 samples of petioles collected across two growing seasons, consisting of the chemical concentrations of 11 nutrients with spectral reflectance values between 400 and 2500 nm. The pipeline consisted of a base layer composed of a multiple univariate linear Lasso regression models to find the initial independent signatures of each nutrient, followed by a layer of nonlinear models to correlate these signatures and account for their interdependencies before finalizing the estimation. The results show that adding this second layer improved estimation performance for 10 and 9 nutrients out of 12 in the dried and fresh mode, respectively, with large improvements in predictive performance for some critical micronutrients such as Zn, Fe, and Al.
利用光谱学检测马铃薯植物营养状况的能力有几个优点,包括能够主动响应某些元素的缺乏。虽然迄今为止的研究主要集中在寻找基于其叶片反射率的元素的光谱特征,但尚未研究元素的光谱特征在估计其在植物中的浓度时彼此之间的影响。这项工作提出了一个堆叠回归模型的管道,能够准确地估计基于叶片反射率的营养物质浓度。利用两个生长季节收集的179份叶柄样本建立了一个数据集,包括11种营养物的化学浓度,光谱反射率在400 ~ 2500 nm之间。该管道由一个由多个单变量线性Lasso回归模型组成的底层组成,用于找到每种营养素的初始独立特征,然后是一层非线性模型,用于关联这些特征并在最终估计之前解释它们的相互依赖性。结果表明,在干燥和新鲜模式下,添加第二层可分别提高12种营养物质中10种和9种的预测性能,对锌、铁和铝等关键微量营养物质的预测性能有较大提高。
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引用次数: 0
YOLO-light-pruned: A lightweight model for monitoring maize seedling count and leaf age using near-ground and UAV RGB images YOLO-light-pruned:基于近地和无人机RGB图像监测玉米幼苗数和叶龄的轻量级模型
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-02 DOI: 10.1016/j.aiia.2025.10.002
Tiantian Jiang , Liang Li , Zhen Zhang , Xun Yu , Yanqin Zhu , Liming Li , Yadong Liu , Yali Bai , Ziqian Tang , Shuaibing Liu , Yan Zhang , Zheng Duan , Dameng Yin , Xiuliang Jin
Maize seedling count and leaf age are critical indicators of early growth status, essential for effective field management and breeding variety selection. Traditional field monitoring methods are time-consuming, labor-intensive, and prone to subjective errors. Recently, deep learning-based object detection models have gained attention in crop seedling counting. However, many of these models exhibit high computational complexity and implementation costs, making field deployment challenging. Moreover, maize leaf age monitoring in field environments is barely investigated. Therefore, this study proposes two lightweight models, YOLOv8n-Light-Pruned (YOLOv8n-LP) and YOLOv11n-Light-Pruned (YOLOv11n-LP), for monitoring maize seedling count and leaf age in field RGB images. Our proposed models are improved from YOLOv8n and YOLOv11n by incorporating the DAttention mechanism, an improved BiFPN, an EfficientHead, and layer-adaptive magnitude-based pruning. The improvement in model complexity and model efficiency was significant, with the number of parameters reduced by over 73 % and model efficiency upgraded by up to 42.9 % depending on the device computation power. High accuracy was achieved in seedling counting (YOLOv8n-LP/ YOLOv11n-LP: AP = 0.968/0.969, R2 = 0.91/0.94, rRMSE = 6.73 %/5.59 %), with significantly reduced model size (YOLOv8n-LP/ YOLOv11n-LP: parameters = 0.8 M/0.7 M, trained model size = 1.8 MB/1.7 MB). The robustness was validated across datasets with varying leaf ages (rRMSE = 4.07 % – 7.27 %), resolutions (rRMSE = 3.06 % – 6.28 %), seedling compositions (rRMSE = 1.09 % – 9.29 %), and planting densities (rRMSE = 3.38 % – 10.82 %). Finally, by integrating plant counting and leaf age estimation, the proposed models demonstrated high accuracy in leaf age detection using near-ground images (YOLOv8n-LP/ YOLOv11n-LP: rRMSE = 5.73 %/7.54 %) and UAV images (rRMSE = 9.24 %/14.44 %). The results demonstrate that the proposed models excel in detection accuracy, deployment efficiency, and adaptability to complex field environments, providing robust support for practical applications in precision agriculture.
玉米幼苗数和叶龄是玉米早期生长状况的重要指标,对田间有效管理和选育品种至关重要。传统的现场监测方法耗时长、劳动强度大,而且容易出现主观误差。近年来,基于深度学习的目标检测模型在农作物幼苗计数中得到了广泛关注。然而,这些模型中的许多都具有较高的计算复杂性和实施成本,使得现场部署具有挑战性。此外,对田间环境下玉米叶龄监测的研究很少。因此,本研究提出了YOLOv8n-Light-Pruned (YOLOv8n-LP)和YOLOv11n-Light-Pruned (YOLOv11n-LP)两种轻量级模型,用于田间RGB图像中玉米幼苗数和叶龄的监测。我们提出的模型是在YOLOv8n和YOLOv11n的基础上改进的,采用了注意力机制、改进的BiFPN、effenhead和基于层的自适应幅度修剪。模型复杂性和模型效率的提高是显著的,参数数量减少了73%以上,模型效率提高了42.9%,具体取决于设备的计算能力。结果表明,YOLOv8n-LP/ YOLOv11n-LP: AP = 0.968/0.969, R2 = 0.91/0.94, rRMSE = 6.73% / 5.59%,模型尺寸显著减小(YOLOv8n-LP/ YOLOv11n-LP:参数= 0.8 M/0.7 M,训练模型尺寸= 1.8 MB/1.7 MB)。在不同叶龄(rRMSE = 4.07% - 7.27%)、分辨率(rRMSE = 3.06% - 6.28%)、幼苗组成(rRMSE = 1.09% - 9.29%)和种植密度(rRMSE = 3.38% - 10.82%)的数据集上验证了该方法的稳健性。最后,通过整合植物计数和叶龄估计,所提出的模型在近地图像(YOLOv8n-LP/ YOLOv11n-LP: rRMSE = 5.73% / 7.54%)和无人机图像(rRMSE = 9.24% / 14.44%)的叶龄检测中显示出较高的精度。结果表明,该模型具有较好的检测精度、部署效率和对复杂野外环境的适应性,为精准农业的实际应用提供了强有力的支持。
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引用次数: 0
Early detection of wheat powdery mildew: A multi-source in situ remote sensing approach enabled by stacked ensemble learning 小麦白粉病的早期检测:基于堆叠集成学习的多源原位遥感方法
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-02 DOI: 10.1016/j.aiia.2025.10.004
Li Song , Jiliang Zhao , Yahui Li , Linru Liu , Jianzhao Duan , Li He , Yonghua Wang , Tiancai Guo , Wei Feng
Powdery mildew seriously hinders photosynthesis and nutrient accumulation in wheat, and its early detection holds the key to enhancing control efficacy. In this research, solar-induced chlorophyll fluorescence (SIF) parameters were derived from radiance and reflectance data, while vegetation indices (VI) were computed using reflectance. A suite of feature selection methods, including shadow feature (Boruta), feature selection (ReliefF), minimum redundancy maximum correlation (mRMR), and random forest (RF). Models were developed on the back propagation (BP) neural network, support vector regression (SVR), and partial least squares regression (PLSR). Furthermore, a stacking ensemble strategy was adopted, utilizing RF and decision tree (DT) algorithms as meta-models to integrate the predictions from base models. The findings revealed that the Boruta method selected a well-balanced number of feature parameters with normalized weights. The multi-source model (SIF + VI) is superior to the single-source model (SIF or VI). The BP model exhibited high accuracy in wheat disease monitoring, particularly during the initial infection phases. The multi-regressor stacked with RF ensemble model (MRSRF) generally surpassed the multi-regressor stacked with DT ensemble model (MRSDT), especially in the initial infection stage, where the MRSRF model's average R2 was 13.03 % higher than that of the BP model. To validate these conclusions, reflectance data simulated by the PROSAIL model (PROSPECT and SAIL) were utilized. The Boruta-MRSRF model demonstrated exceptional advantages in early detection, achieving an R2 greater than 0.90 at all infection stages. This study provides effective ideas and methods for the active prevention and control of crop diseases, which are of great significance for ensuring agricultural production.
白粉病严重阻碍小麦光合作用和养分积累,早期发现白粉病是提高防治效果的关键。在本研究中,太阳诱导的叶绿素荧光(SIF)参数来源于辐射和反射率数据,而植被指数(VI)则来源于反射率数据。一套特征选择方法,包括阴影特征(Boruta)、特征选择(ReliefF)、最小冗余最大相关(mRMR)和随机森林(RF)。基于BP神经网络、支持向量回归(SVR)和偏最小二乘回归(PLSR)建立模型。此外,采用层叠集成策略,利用RF和DT算法作为元模型对基础模型的预测进行集成。结果表明,Boruta方法选择了一个很好的平衡数量的特征参数与归一化的权重。多源模型(SIF + VI)优于单源模型(SIF或VI)。BP模型在小麦病害监测中具有较高的准确性,特别是在感染初期。RF集成模型(MRSRF)叠加的多回归量总体优于DT集成模型(MRSDT),特别是在感染初期,MRSRF模型的平均R2比BP模型高13.03%。为了验证这些结论,利用PROSAIL模型(PROSPECT和SAIL)模拟的反射率数据。Boruta-MRSRF模型在早期检测方面表现出卓越的优势,在所有感染阶段的R2均大于0.90。本研究为积极防治作物病害提供了有效的思路和方法,对保障农业生产具有重要意义。
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引用次数: 0
A perspective analysis of imaging-based monitoring systems in precision viticulture: Technologies, intelligent data analyses and research challenges 精准葡萄栽培中基于成像的监测系统的视角分析:技术、智能数据分析和研究挑战
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-09-09 DOI: 10.1016/j.aiia.2025.08.001
Annaclaudia Bono , Cataldo Guaragnella , Tiziana D'Orazio
This paper presents a comprehensive review of recent advancements in intelligent monitoring systems within the precision viticulture sector. These systems have the potential to make agricultural production more efficient and ensure the adoption of sustainable practices to increase food production and meet growing global demand while maintaining high-quality standards. The review examines core components of non-destructive imaging-based monitoring systems in vineyards, focusing on sensors, tasks, and data processing methodologies. Particular emphasis is placed on solutions designed for practical, in-field deployment. The analysis revealed that the most commonly used sensors are RGB cameras and that the most widespread analysis focuses on grape bunches, as they provide information on both the quality and quantity of the harvest. Regarding the image processing methods, it emerged that those based on deep learning are the most adopted. In addition, a detailed analysis highlights the main technical and practical limitations in real-world scenarios, such as the management of computational resources, the need for large datasets, and the difficulties in interpreting the results. The paper concludes with an in-depth discussion of the challenges and open research questions, providing insights into potential future directions for intelligent monitoring systems in precision viticulture. These include the continued exploration of sensors to balance ease of use and accuracy, the development of generalizable methods, experimentation in real-world scenarios, and collaboration between experts for practical solutions.
本文介绍了精密葡萄栽培领域智能监控系统的最新进展。这些系统有可能提高农业生产效率,并确保采用可持续做法,以增加粮食产量,满足日益增长的全球需求,同时保持高质量标准。该综述审查了葡萄园非破坏性成像监测系统的核心组成部分,重点是传感器、任务和数据处理方法。特别强调的是为实际的现场部署而设计的解决方案。分析显示,最常用的传感器是RGB相机,最广泛的分析集中在葡萄串上,因为它们提供了收获的质量和数量的信息。在图像处理方法方面,基于深度学习的方法被采用的最多。此外,详细分析强调了现实场景中的主要技术和实践限制,例如计算资源的管理,对大型数据集的需求以及解释结果的困难。最后,本文深入讨论了当前面临的挑战和开放的研究问题,并为精准葡萄栽培中智能监测系统的潜在未来发展方向提供了见解。其中包括对传感器的持续探索,以平衡易用性和准确性,开发可推广的方法,在现实世界场景中进行实验,以及专家之间的合作,以寻求实际的解决方案。
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引用次数: 0
Development of an enhanced hybrid attention YOLOv8s small object detection method for phenotypic analysis of root nodules 一种用于根瘤表型分析的增强杂交注意YOLOv8s小目标检测方法的开发
IF 12.4 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-07-21 DOI: 10.1016/j.aiia.2025.07.001
Ya Zhao , Wen Zhang , Liangxiao Zhang , Xiaoqian Tang , Du Wang , Qi Zhang , Peiwu Li
Nodule formation and their involvement in biological nitrogen fixation are critical features of leguminous plants, with phenotypic characteristics closely linked to plant growth and nitrogen fixation efficiency. However, the phenotypic analysis of root nodules remains technically challenging due to their small size, weak texture, dense clustering, and occlusion. To address these challenges, this study constructed a scanner-based imaging platform and optimized data acquisition conditions for high-resolution, high-consistency root nodule images under field conditions. In addition, A hybrid small-object detection method, SCO-YOLOv8s, was proposed, integrating Swin Transformer and CBAM attention mechanisms into the YOLOv8s framework to enhance global and local feature representation. Furthermore, an Otsu segmentation-based post-processing module was incorporated to validate and refine detection results based on geometric features, boundary sharpness, and image entropy, effectively reducing false positives and enhancing robustness in complex scenes. Using this integrated approach, over 3375 nodules were identified from a single plant sample in under 1 min, with extracted phenotypic features such as diameter, color, and texture. A total of 10,879 high-quality annotated images were collected from 39 peanut varieties across 14 provinces and 31 soybean varieties across 12 provinces in China, addressing the current lack of large-scale datasets for legume root nodules. The SCO-YOLOv8s model achieved a precision of 97.29 %, a mAP of 98.23 %, and an overall identification accuracy of 95.83 %. This integrated approach provides a practical and scalable solution for high-throughput nodule phenotyping, and may contribute to a deeper understanding of nitrogen fixation mechanisms.
根瘤形成及其参与生物固氮是豆科植物的重要特征,其表型特征与植物生长和固氮效率密切相关。然而,由于根瘤体积小、质地弱、密集聚集和闭塞,根瘤的表型分析在技术上仍然具有挑战性。为了应对这些挑战,本研究构建了一个基于扫描仪的成像平台,并优化了现场条件下高分辨率、高一致性根瘤图像的数据采集条件。此外,提出了一种混合小目标检测方法SCO-YOLOv8s,该方法将Swin Transformer和CBAM注意机制集成到YOLOv8s框架中,增强了全局和局部特征表征。此外,采用基于Otsu分割的后处理模块,基于几何特征、边界清晰度和图像熵对检测结果进行验证和细化,有效减少误报,增强复杂场景下的鲁棒性。利用这种综合方法,在不到1分钟的时间内从单个植物样本中鉴定出超过3375个根瘤,并提取了直径、颜色和纹理等表型特征。共收集了中国14个省39个花生品种和12个省31个大豆品种的10879张高质量的注释图像,解决了目前缺乏大规模豆科根瘤数据集的问题。SCO-YOLOv8s模型的识别精度为97.29%,mAP为98.23%,总体识别精度为95.83%。这种综合方法为高通量根瘤表型分析提供了一种实用且可扩展的解决方案,并可能有助于更深入地了解固氮机制。
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引用次数: 0
Automatic body temperature detection of group-housed piglets based on infrared and visible image fusion 基于红外与可见光图像融合的群养仔猪体温自动检测
IF 8.2 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-07-07 DOI: 10.1016/j.aiia.2025.06.008
Kaixuan Cuan , Feiyue Hu , Xiaoshuai Wang , Xiaojie Yan , Yanchao Wang , Kaiying Wang
Rapid and accurate measurement of body temperature is essential for early disease detection, as it is a key indicator of piglet health. Infrared thermography (IRT) is a widely used, convenient, non-intrusive, and efficient non-contact temperature measurement technology. However, the activities and clustering of group-housed piglets make it challenging to measure the individual body temperature using IRT. This study proposes a method for detecting body temperature in group-housed piglets using infrared-visible image fusion. The infrared and visible images were automatically captured by cameras mounted on a robot. An improved YOLOv8-PT model was proposed to detect both piglets and their key body regions (ears, abdomen and hip) in visible images. Subsequently, the Oriented FAST and Rotated BRIEF (ORB) image registration method and the U2Fusion image fusion network were employed to extract temperatures from the detected body parts. Finally, a core body temperature (CBT) estimation model was developed, with actual rectal temperature serving as the gold standard. The temperatures of three body parts detected by infrared thermography were used to estimate CBT, and the maximum estimated temperature based on these body parts (EBT-Max) was selected as the final result. In the experiment, the YOLOv8-PT model achieved a [email protected] of 93.6 %, precision of 93.3 %, recall of 88.9 %, and F1 score of 91.05 %. The average detection time per image was 4.3 ms, enabling real-time detection. Additionally, the mean absolute errors (MAE) and correlation coefficient between EBT-Max and actual rectal temperature is 0.40 °C and 0.6939, respectively. Therefore, this method provides a feasible and efficient approach for group-housed piglets body temperature detection and offers a reference for the development of automated pig health monitoring systems.
快速准确地测量体温对于早期发现疾病至关重要,因为它是仔猪健康的关键指标。红外热像仪(IRT)是一种应用广泛、方便、非侵入式、高效的非接触式测温技术。然而,群养仔猪的活动和聚集性使得使用IRT测量个体体温具有挑战性。本研究提出了一种利用红外-可见光图像融合检测群养仔猪体温的方法。红外和可见光图像由安装在机器人上的摄像机自动捕获。提出了一种改进的YOLOv8-PT模型,用于在可见图像中检测仔猪及其关键身体部位(耳朵、腹部和臀部)。随后,采用定向FAST和旋转BRIEF (ORB)图像配准方法和U2Fusion图像融合网络提取被检测身体部位的温度。最后,建立了以直肠实际温度为金标准的核心体温(CBT)估计模型。利用红外热像仪检测到的三个身体部位的温度来估计CBT,并选择基于这些身体部位的最大估计温度(EBT-Max)作为最终结果。在实验中,YOLOv8-PT模型的[email protected]识别率为93.6%,准确率为93.3%,召回率为88.9%,F1分数为91.05%。每张图像的平均检测时间为4.3 ms,实现了实时检测。EBT-Max与实际直肠温度的平均绝对误差(MAE)和相关系数分别为0.40℃和0.6939℃。因此,该方法为群养仔猪体温检测提供了一种可行、高效的方法,为猪健康自动化监测系统的开发提供了参考。
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引用次数: 0
VMGP: A unified variational auto-encoder based multi-task model for multi-phenotype, multi-environment, and cross-population genomic selection in plants VMGP:一个基于统一变分自编码器的多任务模型,用于植物的多表型、多环境和跨群体基因组选择
IF 8.2 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-06-24 DOI: 10.1016/j.aiia.2025.06.007
Xiangyu Zhao , Fuzhen Sun , Jinlong Li , Dongfeng Zhang , Qiusi Zhang , Zhongqiang Liu , Changwei Tan , Hongxiang Ma , Kaiyi Wang
Plant breeding stands as a cornerstone for agricultural productivity and the safeguarding of food security. The advent of Genomic Selection heralds a new epoch in breeding, characterized by its capacity to harness whole-genome variation for genomic prediction. This approach transcends the need for prior knowledge of genes associated with specific traits. Nonetheless, the vast dimensionality of genomic data juxtaposed with the relatively limited number of phenotypic samples often leads to the “curse of dimensionality”, where traditional statistical, machine learning, and deep learning methods are prone to overfitting and suboptimal predictive performance. To surmount this challenge, we introduce a unified Variational auto-encoder based Multi-task Genomic Prediction model (VMGP) that integrates self-supervised genomic compression and reconstruction with multiple prediction tasks. This approach provides a robust solution, offering a formidable predictive framework that has been rigorously validated across public datasets for wheat, rice, and maize. Our model demonstrates exceptional capabilities in multi-phenotype and multi-environment genomic prediction, successfully navigating the complexities of cross-population genomic selection and underscoring its unique strengths and utility. Furthermore, by integrating VMGP with model interpretability, we can effectively triage relevant single nucleotide polymorphisms, thereby enhancing prediction performance and proposing potential cost-effective genotyping solutions. The VMGP framework, with its simplicity, stable predictive prowess, and open-source code, is exceptionally well-suited for broad dissemination within plant breeding programs. It is particularly advantageous for breeders who prioritize phenotype prediction yet may not possess extensive knowledge in deep learning or proficiency in parameter tuning.
植物育种是农业生产力和保障粮食安全的基石。基因组选择的出现预示着育种的新时代,其特点是能够利用全基因组变异进行基因组预测。这种方法超越了对与特定性状相关的基因的先验知识的需要。尽管如此,庞大的基因组数据维度与相对有限的表型样本数量并置于一起,往往导致“维度诅咒”,传统的统计、机器学习和深度学习方法容易出现过拟合和次优预测性能。为了克服这一挑战,我们引入了一个统一的基于变分自编码器的多任务基因组预测模型(VMGP),该模型将自监督基因组压缩和重建与多个预测任务集成在一起。这种方法提供了一个强大的解决方案,提供了一个强大的预测框架,该框架已在小麦、水稻和玉米的公共数据集中得到严格验证。我们的模型展示了在多表型和多环境基因组预测方面的卓越能力,成功地驾驭了跨种群基因组选择的复杂性,并强调了其独特的优势和实用性。此外,通过将VMGP与模型可解释性相结合,我们可以有效地分类相关的单核苷酸多态性,从而提高预测性能并提出潜在的经济有效的基因分型解决方案。VMGP框架具有简单、稳定的预测能力和开源代码,非常适合在植物育种项目中广泛传播。这是特别有利的育种者优先考虑表型预测,但可能不具备广泛的知识,在深度学习或熟练掌握参数调整。
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引用次数: 0
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Artificial Intelligence in Agriculture
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